View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12067_high_2 (Length: 697)

Name: NF12067_high_2
Description: NF12067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12067_high_2
NF12067_high_2
[»] chr1 (19 HSPs)
chr1 (144-683)||(12885039-12885582)
chr1 (151-415)||(12921789-12922053)
chr1 (144-415)||(12955999-12956271)
chr1 (144-393)||(12914491-12914740)
chr1 (144-386)||(12950243-12950485)
chr1 (144-386)||(12942585-12942827)
chr1 (144-434)||(12992219-12992510)
chr1 (15-74)||(12885647-12885706)
chr1 (153-343)||(12893672-12893862)
chr1 (205-341)||(12997910-12998045)
chr1 (462-576)||(12992560-12992675)
chr1 (15-74)||(12942465-12942524)
chr1 (15-74)||(12950123-12950182)
chr1 (501-578)||(12914294-12914371)
chr1 (307-410)||(13000911-13001015)
chr1 (28-74)||(12955895-12955941)
chr1 (464-565)||(12942932-12943033)
chr1 (583-656)||(12921559-12921632)
chr1 (20-74)||(12922143-12922197)
[»] chr8 (5 HSPs)
chr8 (470-530)||(14071072-14071132)
chr8 (470-530)||(14073859-14073919)
chr8 (470-562)||(14069500-14069593)
chr8 (175-260)||(14073726-14073811)
chr8 (175-223)||(14069378-14069426)


Alignment Details
Target: chr1 (Bit Score: 474; Significance: 0; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 144 - 683
Target Start/End: Complemental strand, 12885582 - 12885039
Alignment:
Q  144 ttttatttgtatttgcagagtgtaccaaaggagtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaa 243  Q
    |||| |||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12885582 ttttgtttgtatttgcagagtgtaccaaaggagtttatgaaaaaaggaagtaatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaa 12885483  T
Q  244 aagtcaattattatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctt 343  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12885482 aagtcaattattatgagagtgttcatggctggaggttcaataaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctt 12885383  T
Q  344 taatctaatcgatgagagaaaatttgtgtttgatgtttcaattataggaagaacccattagttgtttgttctattgttctttaagatactaactagatgt 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  12885382 taatctaatcgatgagagaaaatttgtgtttgatgtttcaattataggaagaacccattagttgtttgttgtgttgttctttaagatactaactagatgt 12885283  T
Q  444 taagttgaacacatatttgctctacaattttaagcattgtattttggtactataaacatctgtgtttgatttgaatctaaggagaatcatgtcaaccttt 543  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12885282 taagttgaacacatatttgctctacaattttaagcattgtattttggtactataaacatctgtgtttgatttgaatctaaggagaatcatgtcagccttt 12885183  T
Q  544 ggattttttctctatgat----tgttggtaatgttttttgggaaacaaggcgtgaagatcttttagtaaatgcagatataatattttttactattagtta 639  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12885182 ggattttttctctatgattgtttgttggtaatgttttttgggaaacaaggcgtgaagatcttttagtaaatgcagatataatattttttactattagtta 12885083  T
Q  640 aaggaattgtttgatgannnnnnnctccctttggtttgtttttg 683  Q
    |||||||||||||||||       ||||||||||||||||||||    
T  12885082 aaggaattgtttgatgatttttttctccctttggtttgtttttg 12885039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 151 - 415
Target Start/End: Complemental strand, 12922053 - 12921789
Alignment:
Q  151 tgtatttgcagagtgtaccaaaggagtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaaaagtcaa 250  Q
    |||||||||||| |||||||||||||||||||||     ||||||||||||||||| ||||||||||| ||||  || ||||||||||||||||||||||    
T  12922053 tgtatttgcagactgtaccaaaggagtttatgaacggaggaagtcatgaaaatattttggagttgaaagtggggggacagtcatggttcgtaaaagtcaa 12921954  T
Q  251 ttattatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctttaatcta 350  Q
    |||||| ||||||||||   |||| ||||| |||||||| ||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||  ||    
T  12921953 ttattacgagagtgttcggagctgcaggtttagtaaaggttggagaaaattcatgaaagcatgcaaagtggagatcggagatacttgtctctttaagtta 12921854  T
Q  351 atcgatgagagaaaatttgtgtttgatgtttcaattataggaagaacccattagttgtttgttct 415  Q
    || |||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  12921853 attgatgagagaaaatttgtgtttgatgtttcagttataggatgaatccattagttgtttgttct 12921789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 144 - 415
Target Start/End: Original strand, 12955999 - 12956271
Alignment:
Q  144 ttttatttgtatttgcagagtgtaccaaaggagtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaa 243  Q
    |||| ||||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12955999 ttttgtttgtatttgcagagtgtaccaaaggagtttatgaaaagaggatgtcatgaaaatattgtggagttgaaaatggggagaaagtcatggttcgtaa 12956098  T
Q  244 aagtcaattattatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctt 343  Q
    |||| || ||||| |||||| ||  |||||| |||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||| |    
T  12956099 aagtgaactattacgagagtatttgtggctgtaggttcagtaaaggttggagaaagttcatgaaagaatgcaaagtggagattggagatacttgtctcct 12956198  T
Q  344 taatctaatcgatgagagaaaatttgtgtttgatgtttcaattatagg-aagaacccattagttgtttgttct 415  Q
    |||  | || |||||  ||||||||||||||||||||||||||  ||| ||||| ||||||| ||||||||||    
T  12956199 taagttgattgatgaacgaaaatttgtgtttgatgtttcaattgcaggaaagaatccattagctgtttgttct 12956271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 144 - 393
Target Start/End: Complemental strand, 12914740 - 12914491
Alignment:
Q  144 ttttatttgtatttgcagagtgtaccaaaggagtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaa 243  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||  || || |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  12914740 ttttgtttgtatctgcagtgtgtaccaaaggagtttatgaaaaaaggatgtaatgaaaatattgtggagttgaaaatggggagaaagtcatggtttgtaa 12914641  T
Q  244 aagtcaattattatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctt 343  Q
    ||||||||| ||||  |||| ||  |||||| |||||||||||||| |||||| |||||||| ||| | |||||||||||||||||||||||||||| ||    
T  12914640 aagtcaatttttatcggagtctttgtggctgtaggttcagtaaaggttggagacaatttatgaaagcaggcaaagtggagattggagatacttgtctttt 12914541  T
Q  344 taatctaatcgatgagagaaaatttgtgtttgatgtttcaattataggaa 393  Q
    |||  |||| |||||||| |||||||||||||||||||||||| ||||||    
T  12914540 taagttaattgatgagaggaaatttgtgtttgatgtttcaattgtaggaa 12914491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 144 - 386
Target Start/End: Original strand, 12950243 - 12950485
Alignment:
Q  144 ttttatttgtatttgcagagtgtaccaaaggagtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaa 243  Q
    |||| ||||||||||||| |||| |||||||||||||||||||   || || ||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  12950243 ttttgtttgtatttgcagggtgtgccaaaggagtttatgaaaagaggatgtaatgaaaatattgtggagttaaaaatggggagaaagtcatggtttgtaa 12950342  T
Q  244 aagtcaattattatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctt 343  Q
    |||||||||||||||||||| |||||||||| || |||||||| ||||||| |||||||||| ||| |||||||||| |||||||||| |||||||||||    
T  12950343 aagtcaattattatgagagtattcatggctgcagattcagtaagggatggacaaaatttatgaaagcatgcaaagtgaagattggagacacttgtctctt 12950442  T
Q  344 taatctaatcgatgagagaaaatttgtgtttgatgtttcaatt 386  Q
    ||   |||| ||||| || ||||||||||||||||||||||||    
T  12950443 taggttaattgatgaaaggaaatttgtgtttgatgtttcaatt 12950485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 144 - 386
Target Start/End: Original strand, 12942585 - 12942827
Alignment:
Q  144 ttttatttgtatttgcagagtgtaccaaaggagtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaa 243  Q
    |||| ||||||||||||||||||||||||||||||||||||||   || || |||||||||| ||||| |||||||||||  |||||||||||| |||||    
T  12942585 ttttgtttgtatttgcagagtgtaccaaaggagtttatgaaaaggggatgtaatgaaaatatcgtggaattgaaaatggggggaaagtcatggtacgtaa 12942684  T
Q  244 aagtcaattattatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctt 343  Q
    |||| || |||||||| ||| ||  |||||| |||||| ||||||| |||||| |||||||| ||| ||||||||||||||||||||||| |||||||||    
T  12942685 aagtgaactattatgatagtatttgtggctgtaggttcggtaaaggttggagacaatttatgaaagcatgcaaagtggagattggagatatttgtctctt 12942784  T
Q  344 taatctaatcgatgagagaaaatttgtgtttgatgtttcaatt 386  Q
    |||  | || ||||||||||  ||| |||||||||||||||||    
T  12942785 taagttgattgatgagagaatttttttgtttgatgtttcaatt 12942827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 144 - 434
Target Start/End: Original strand, 12992219 - 12992510
Alignment:
Q  144 ttttatttgtatttgcagagtgtaccaaaggagtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaa 243  Q
    |||| |||||||||||||| ||| |||||||||||||||||||   |||||||||||||  || ||||||||||||||||  ||   |||||||  ||||    
T  12992219 ttttgtttgtatttgcagaatgttccaaaggagtttatgaaaagaggaagtcatgaaaactttctggagttgaaaatggggggacgatcatggtctgtaa 12992318  T
Q  244 aagtcaattattatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctt 343  Q
    |||| ||||||||||| ||| ||||||| |  || |||  |  ||| |||||| |||| ||  |||||||||||||||||||||||||||||  ||||||    
T  12992319 aagtgaattattatgatagtattcatggttatagattctctggaggttggagacaattcataaaagaatgcaaagtggagattggagatactcttctctt 12992418  T
Q  344 taatctaatcgatgagagaaaatttgtgtttgatgtttcaattatagg-aagaacccattagttgtttgttctattgttctttaagatacta 434  Q
    |||  | || |||||||| || ||||||||||||||||||||| |||| || || || |||| || |||||||||||||||||||| |||||    
T  12992419 taagttgattgatgagagcaagtttgtgtttgatgtttcaattgtaggaaaaaatcccttagctgcttgttctattgttctttaaggtacta 12992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 12885706 - 12885647
Alignment:
Q  15 gatgaagcataacacattgaaggttttggtgaagaacaaagctccggtaggattaattac 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12885706 gatgaagcataacacattgaaggttttggtgaagaacaaagctccggtaggattaattac 12885647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 153 - 343
Target Start/End: Complemental strand, 12893862 - 12893672
Alignment:
Q  153 tatttgcagagtgtaccaaaggagtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaaaagtcaatt 252  Q
    |||||||||  ||||||||| || ||||||||||   || ||||||||||| |||||||||||||||| || | | | ||||||||| ||||||| ||||    
T  12893862 tatttgcaggatgtaccaaatgaatttatgaaaagaggatgtcatgaaaatcttgtggagttgaaaatagggatacaatcatggttcataaaagtgaatt 12893763  T
Q  253 attatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttatggaagaatgcaaagtggagattggagatacttgtctctt 343  Q
    |||||   ||| | | |||||| || ||| ||||||| |||||||| ||| ||||| | ||||||||| || ||||| |||||||||||||    
T  12893762 attatcctagtatccgtggctgtagattcggtaaaggttggagaaattttgtggaaaattgcaaagtgaagtttggaaatacttgtctctt 12893672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 341
Target Start/End: Original strand, 12997910 - 12998045
Alignment:
Q  205 ttgtggagttgaaaatgggaagaaagtcatggttcgtaaaagtcaattattatgagagtgttcatggctggaggttcagtaaaggatggagaaaatttat 304  Q
    |||||||||||||||||||  || | |||||||| |||||||| | |||||||   ||| ||| ||| ||   |||||||||||| |||| |||||||||    
T  12997910 ttgtggagttgaaaatgggg-gacaatcatggtttgtaaaagtgatttattatcctagtattcgtggttgtttgttcagtaaaggttggataaaatttat 12998008  T
Q  305 ggaagaatgcaaagtggagattggagatacttgtctc 341  Q
    ||||||| |||||||||| |||||| |||||||||||    
T  12998009 ggaagaaagcaaagtggaaattggaaatacttgtctc 12998045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 462 - 576
Target Start/End: Original strand, 12992560 - 12992675
Alignment:
Q  462 gctctacaattttaagcattgtattttggtactataaacatctgtgtttgatttgaatctaaggagaatcatg-tcaacctttggattttttctctatga 560  Q
    ||||||| ||||||||| |||||||||| |  | ||||| ||| ||||| ||||||||||||| |  |||||| ||||||||||||||||| || |||||    
T  12992560 gctctacgattttaagctttgtattttgttcttgtaaacttctatgtttcatttgaatctaagcaacatcatgatcaacctttggatttttactatatga 12992659  T
Q  561 ttgttggtaatgtttt 576  Q
    ||||| ||||||||||    
T  12992660 ttgtttgtaatgtttt 12992675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 12942465 - 12942524
Alignment:
Q  15 gatgaagcataacacattgaaggttttggtgaagaacaaagctccggtaggattaattac 74  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||||||||||    
T  12942465 gatgaagcataacacattcaaggttatggtgaagaacaatgccccggtaggattaattac 12942524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 12950123 - 12950182
Alignment:
Q  15 gatgaagcataacacattgaaggttttggtgaagaacaaagctccggtaggattaattac 74  Q
    |||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||    
T  12950123 gatgaagcataacacatttaaggttttggtgaagaacacatccccggtaggattaattac 12950182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 578
Target Start/End: Complemental strand, 12914371 - 12914294
Alignment:
Q  501 atctgtgtttgatttgaatctaaggagaatcatgtcaacctttggattttttctctatgattgttggtaatgtttttt 578  Q
    |||||| |||||||| || |||||  | ||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  12914371 atctgtatttgattttaacctaagaggtatcgtgtcaacctttggatttttgttctatgattgttggtaatgtttttt 12914294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 307 - 410
Target Start/End: Complemental strand, 13001015 - 13000911
Alignment:
Q  307 aagaatgcaaagtggagattggagatacttgtctctttaatctaatcgatgagagaaaatttgtgtttgatgtttcaattatag-gaagaacccattagt 405  Q
    ||||||||||||||||||||    ||||||||||||| ||  | || ||||||| ||||||||||||| ||||||||||| |||  |||||||||||||     
T  13001015 aagaatgcaaagtggagattctccatacttgtctcttgaagttgattgatgagaaaaaatttgtgtttaatgtttcaattgtagaaaagaacccattagc 13000916  T
Q  406 tgttt 410  Q
    |||||    
T  13000915 tgttt 13000911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 12955895 - 12955941
Alignment:
Q  28 acattgaaggttttggtgaagaacaaagctccggtaggattaattac 74  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  12955895 acattcaaggttttggtgaagaacacagctccggtaggattaattac 12955941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 565
Target Start/End: Original strand, 12942932 - 12943033
Alignment:
Q  464 tctacaattttaagcattgtattttggtactataaacatctgtgtttgatttgaatctaaggagaatcatgtcaacctttggattttttctctatgattg 563  Q
    |||||||| ||||||| |||||||||||| | ||||||| ||| ||||||||||| ||||| || ||  ||||| |||| |||| |||  ||||||||||    
T  12942932 tctacaatattaagcaatgtattttggtattgtaaacatttgtatttgatttgaacctaagaagtatattgtcagccttcggatatttgttctatgattg 12943031  T
Q  564 tt 565  Q
    ||    
T  12943032 tt 12943033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 656
Target Start/End: Complemental strand, 12921632 - 12921559
Alignment:
Q  583 aacaaggcgtgaagatcttttagtaaatgcagatataatattttttactattagttaaaggaattgtttgatga 656  Q
    |||||||| ||||||| | |||||| ||||| ||||  ||||||||||||||| ||||| ||| ||||||||||    
T  12921632 aacaaggcttgaagatatattagtacatgcaaatatgttattttttactattatttaaaagaactgtttgatga 12921559  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 12922197 - 12922143
Alignment:
Q  20 agcataacacattgaaggttttggtgaagaacaaagctccggtaggattaattac 74  Q
    |||||||||| || |||||| |||||||||| | || ||||||||||||||||||    
T  12922197 agcataacacgttcaaggttatggtgaagaatagagttccggtaggattaattac 12922143  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 470 - 530
Target Start/End: Original strand, 14071072 - 14071132
Alignment:
Q  470 attttaagcattgtattttggtactataaacatctgtgtttgatttgaatctaaggagaat 530  Q
    |||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||| |||||    
T  14071072 attttaagcattgtattttgttaccataaacatttgtatttgatttgaatctaagtagaat 14071132  T

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Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 470 - 530
Target Start/End: Original strand, 14073859 - 14073919
Alignment:
Q  470 attttaagcattgtattttggtactataaacatctgtgtttgatttgaatctaaggagaat 530  Q
    |||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||| |||||    
T  14073859 attttaagcattgtattttgttaccataaacatttgtatttgatttgaatctaagtagaat 14073919  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 562
Target Start/End: Original strand, 14069500 - 14069593
Alignment:
Q  470 attttaagcattgtattttggtactataaacatctgtgtttgatttgaatctaaggagaatcat-gtcaacctttggattttttctctatgatt 562  Q
    ||||||||||||| |||||| ||| |||||||| ||  ||| ||||||||||||| |||||  | ||||||||||| |||||| ||||||||||    
T  14069500 attttaagcattgcattttgttacaataaacatttgcatttaatttgaatctaagtagaattttagtcaacctttgaatttttgctctatgatt 14069593  T

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Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 14073726 - 14073811
Alignment:
Q  175 agtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatgggaagaaagtcatggttcgtaaaagtcaattattatgag 260  Q
    |||||||||||||  ||  | |||||||||||||| ||||||||||||   || | |||||||||||||||||||| | |||||||    
T  14073726 agtttatgaaaaagggatcttatgaaaatattgtgtagttgaaaatggagggataatcatggttcgtaaaagtcaaattttatgag 14073811  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 14069378 - 14069426
Alignment:
Q  175 agtttatgaaaaatagaagtcatgaaaatattgtggagttgaaaatggg 223  Q
    ||||||||||||   || |||||||||||||||||||||| ||||||||    
T  14069378 agtttatgaaaaggggatgtcatgaaaatattgtggagttcaaaatggg 14069426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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