View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12068_high_8 (Length: 257)
Name: NF12068_high_8
Description: NF12068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12068_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 12875614 - 12875834
Alignment:
| Q |
17 |
agacaagctacacaattacttaatattatttgaaggacatgatacatattataggatatatataatcaaaggaccaagaaatataataaaaattcacgtt |
116 |
Q |
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| T |
12875614 |
agacaagctgcacaattacttaatattatttgaaggacatgatacatattataggatatatataatcaaaggaccaagaaatataataaaaattcatgtt |
12875713 |
T |
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| Q |
117 |
gagaaggtgagaagagaaagtgtgttataaactgtattgacgatgacatacatgtggtcaacaacttgctaatcaagaaggtttaggaccattcttttgg |
216 |
Q |
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| T |
12875714 |
gagaaggtgagaagagaaagtgtgttataaactgtattgacgatgacatacatgtggtcaacaacttgctaatcaagaaggtttaggaccattcttttgg |
12875813 |
T |
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| Q |
217 |
gaattaaatggccaagggtcc |
237 |
Q |
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| T |
12875814 |
gaattaaatggccaagggtcc |
12875834 |
T |
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