View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12071_low_1 (Length: 1183)
Name: NF12071_low_1
Description: NF12071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12071_low_1 |
 | |
|
| [»] scaffold0613 (1 HSPs) |
| | |
|
| [»] scaffold0134 (1 HSPs) |
| | |
|
| [»] scaffold0054 (5 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 711; Significance: 0; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 711; E-Value: 0
Query Start/End: Original strand, 18 - 882
Target Start/End: Complemental strand, 9603073 - 9602197
Alignment:
| Q |
18 |
catatgtcttatcttcatggatttggttacgacgaccttagaaatgattataatgtcatatgttacataactattacgggtcaacacactagctatggac |
117 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9603073 |
catacgtcttatcttcatggatttggttacgacgaccttagaaatgattataatgtcatatgttacataactattacgggtcaacacgctagctatggac |
9602974 |
T |
|
| Q |
118 |
atatgtctttagatccaatttgggtgaaatatagcttaagaactaactcgtggaaaaggatacttatttttgacatgccttgttccttggcacatattga |
217 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
9602973 |
atatgtctttagacccaatttgggtgaaatatagcttaagaactaactcgtggaaaaggatacttatttttgacatgccttattccttggcacttattga |
9602874 |
T |
|
| Q |
218 |
cggcagtcaagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaat |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9602873 |
cggcagtcaagtctacatggatggtgtgtgtcattggttgtgggaagaagatgaagatagtcaagatggaagatggttggtatcattttacttgagcaat |
9602774 |
T |
|
| Q |
318 |
gaggtattcttcataacacccataccctcgtacttagatgattgtttcaaagctttgtggataaacttggtggtgttaaatgggtccgtttcattgatct |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9602773 |
gaggtattcttcataacacccataccctcgtacttagatgattgtttcaaagcattgtggataaacttggtggtgttaaatgggtccgtttcattgatct |
9602674 |
T |
|
| Q |
418 |
catatcataaagagacgaataattttcaaatatcaattttgg-----tggtgttaaatggattcgtggaccaaactctttattgttggatcgttgtcttt |
512 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | || || ||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9602673 |
catatcataaagagacgaataattttcaaatatcaattttgggtgaatacggtataaaggagtcgtggaccaaactctttaatgttggatcgttgtcttg |
9602574 |
T |
|
| Q |
513 |
cattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgatttaagtactcagtcgattttg |
612 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
|
|
| T |
9602573 |
cattgagcgtcctatcggggttgggatgaaaggagaaatatttgtcatcagagaagataaagaagtagtttgtcttgatttaagtactcaatcggttgtg |
9602474 |
T |
|
| Q |
613 |
gagctttcttacaaagaagtgaattctatt-------ggtcgaatactaatatacagggaaaacattattccaatcggaggaataagtaattatttattt |
705 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
9602473 |
gagctttcttacaaagaagtgaattctattgatcgtcgatcgaatactaatatacaaggaaaacattcttccaatcggaggaataagtaattagttattt |
9602374 |
T |
|
| Q |
706 |
ttcttgttttcaccaggagcaaaatgcaaaatgattgcagtgattgggatattacgttgtatgcaaagtgtcttgtcaattggtaccccggagatttctt |
805 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9602373 |
ttcttgttttcaccaggagcaaaatgcaaaatgattgcagtgattgggatattaccttgtatgcaaagtgtcttgtcaattggaaccccggagatttctt |
9602274 |
T |
|
| Q |
806 |
aaattggtagcgggccattatccttgtatcgtcgctgatgcatatatggttttgtttttggctcatctggtgctgtt |
882 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9602273 |
aaatcggtagcgggccattatccttgtatcgtcgctgatgcatatatggttttgtttttggctcatctggtgctgtt |
9602197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 26 - 987
Target Start/End: Complemental strand, 9594262 - 9593315
Alignment:
| Q |
26 |
ttatcttcatggatttggttacgacgaccttagaaatgattataatgtcatatgttacataactattacgggtcaacacactagctatggacatatgtct |
125 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||| | ||| |||||||||||| ||||||||| |||| |||| | |||||||| |||||||| |
|
|
| T |
9594262 |
ttatcttcatggatttggttacgacaatcttagaaatgactctaaggtcatatgttacgtaactattaggggtgaacatgatggctatggagatatgtct |
9594163 |
T |
|
| Q |
126 |
ttagatccaatttgggtgaaatatagcttaagaactaactcgtggaaaaggatactta---tttttgacatgccttgttccttggcacatattgacggca |
222 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||| ||||||||||| |
|
|
| T |
9594162 |
ttagacccaatttgggtgatatatagcttaagaactaactcgtgga---ggatacttaatgtttttggcatgccttgttcattggcacgtattgacggca |
9594066 |
T |
|
| Q |
223 |
gtcaagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgaggt |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||| |||| || ||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
9594065 |
ctcaagtctacatggatggtgtgtgtcattggttggctgaagaagttgatgataccttggagggaccatgtttggtatccttttacttgagcaatgaggt |
9593966 |
T |
|
| Q |
323 |
attcttcataacacccataccctcgtacttagatgattgtttcaaa------gctttgtggataaacttggtggtgttaaatgggtccgtttcattgatc |
416 |
Q |
| |
|
||||||||||||||||| ||||| ||||| |||||||||||| | || ||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
9593965 |
gttcttcataacacccattccctcatacttggatgattgtttcgatcttcacgcattgtggataaacttggtggtgttaaatgggtcctttgcattgatc |
9593866 |
T |
|
| Q |
417 |
tcatatcataaagagacgaataattttcaaatatcaattttggtggt-----gttaaatggattcgtggaccaaactctttattgttggatcgttgtctt |
511 |
Q |
| |
|
||||||||||||||||| | ||||||||| ||||||||||||| | || || ||| ||||||||||| |||| ||||| ||| ||||||||| |
|
|
| T |
9593865 |
tcatatcataaagagacaactaattttcagatatcaattttgggtgaatacggtataaaggaatcgtggaccaatttcttcattgtcggaccgttgtctt |
9593766 |
T |
|
| Q |
512 |
tcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgatttaagtactcagtcgatttt |
611 |
Q |
| |
|
||||||||||||| ||||| || || || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| ||||| | |
|
|
| T |
9593765 |
tcattgagcgtcccatcggagtgggtacgaaaggagaaatattcttcatcagagaagataaagaactagtttgtcttgatttaaatactcaaacgattgt |
9593666 |
T |
|
| Q |
612 |
ggagctttcttacaaagaagtgaattctattggtcgaatactaatatacagggaaaacattattccaatcggaggaataagtaattatttatttttcttg |
711 |
Q |
| |
|
| ||||| ||| |||| ||||||||||||||| ||| ||| ||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||| |||| |
|
|
| T |
9593665 |
gaagcttgcttgcaaaaaagtgaattctattgatcggatattaatatacaaggaaaacattcttccaattggaggaataagtaattagttattttccttg |
9593566 |
T |
|
| Q |
712 |
ttttcaccaggagcaaaatgcaaaatgattgcagtgattgggatattacgttgtatgcaaagtgtcttgtcaattggta-ccccggagatttcttaaatt |
810 |
Q |
| |
|
|||||||||||||||| |||||| | |||||||| ||||||| ||||||||||||||||||||||||||| | ||| |||||| ||| ||| |
|
|
| T |
9593565 |
ttttcaccaggagcaa-------aatgatcgtggtgattggaatattaccttgtatgcaaagtgtcttgtcaattggaattccctgagattgcttgaatc |
9593473 |
T |
|
| Q |
811 |
ggtagcgggccattatccttgtatcgtcgctgatgcatatatggttttgtttttggctcatctggtgctgtttttctggtttgtggttactgtttggcag |
910 |
Q |
| |
|
||||||||| |||||||||||||| || ||| |||| ||| ||||||||||||| ||||||| || |||| ||||||||||| |
|
|
| T |
9593472 |
ggtagcgggtcattatccttgtattgttgctcatgcttatgtggttttgttttttgctcatc-------------------tgcggttgctgtttggcag |
9593392 |
T |
|
| Q |
911 |
tgggggttctggaagtttcttgggtcgatcccaccgtttttctgtcgagcctccaggcttgttttgtgcggcttcct |
987 |
Q |
| |
|
|||||||||||||||| ||||| ||| |||||||||||||| ||| ||| | |||||||||||||||||||||||| |
|
|
| T |
9593391 |
tgggggttctggaagtgtcttgagtctatcccaccgtttttatgtgcagctttcaggcttgttttgtgcggcttcct |
9593315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 26 - 999
Target Start/End: Complemental strand, 9582469 - 9581509
Alignment:
| Q |
26 |
ttatcttcatggatttggttacgacgaccttagaaatgattataatgtcatatgttacataactattacgggtcaacacactagctatggacatatgtct |
125 |
Q |
| |
|
|||||||||||||||||| |||||| | ||||||||||| ||||| ||||| ||| || |||||||||||||| ||||| || |||||||| ||||||| |
|
|
| T |
9582469 |
ttatcttcatggatttggctacgacaatcttagaaatgactataaggtcatctgtcacgtaactattacgggtgaacacgctggctatggatgtatgtct |
9582370 |
T |
|
| Q |
126 |
ttagatccaatttgggtgaaatatagcttaagaactaactcgtggaaaaggatactta---tttttgacatgccttgttccttggcacatattgacggca |
222 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| ||| | |||||||||||| ||||||| ||||||||||| |
|
|
| T |
9582369 |
ttagacccaatttgggtgatatatagcttaagaactaactcgtgga---ggatacttgatgtttctagcatgccttgttcattggcacgtattgacggca |
9582273 |
T |
|
| Q |
223 |
gtcaagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgaggt |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||| |||| | || ||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
9582272 |
ctcaagtctacatggatggtgtgtgtcattggttggctgaagaagttgatgataccctggagggaccatgtgtggtatcattttacttgagcaatgagga |
9582173 |
T |
|
| Q |
323 |
attcttcataacacccataccctcgtacttagatgattgtttcaaagct------ttgtggataaacttggtggtgttaaatgggtccgtttcattgatc |
416 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||| |||||||||||||||| || |||||||| |
|
|
| T |
9582172 |
attcttcataacatacataccctcatacttagatgattgtttcaatcttcacaccttgtggataaacttggcggtgttaaatgggtccattgcattgatc |
9582073 |
T |
|
| Q |
417 |
tcatatcataaagagacgaataattttcaaatatcaattttggtggt-----gttaaatggattcgtggaccaaactctttattgttggatcgttgtctt |
511 |
Q |
| |
|
||||||||| ||||||||| |||||||| ||||||||||||| | || || ||| || |||||||||||||| || |||||| ||||||||| |
|
|
| T |
9582072 |
tcatatcatgaagagacgacaaattttcacatatcaattttgggtgaatacggtataaaggagtcatggaccaaactcttcatggttggaccgttgtctt |
9581973 |
T |
|
| Q |
512 |
tcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgatttaagtactcagtcgatttt |
611 |
Q |
| |
|
||||||||||||||| || || || || |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| | |
|
|
| T |
9581972 |
gcattgagcgtcctattggagtgggaacgaaaggagaaatattcgtcatcagacaagataaagaactagtttgtcttgatttaagtactcaaatgattgt |
9581873 |
T |
|
| Q |
612 |
ggagctttcttacaaagaagtgaattctattggtcgaatactaatatacagggaaaacattattccaatcggaggaataagtaattatttatttttcttg |
711 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||| ||| |||| |||| || ||||||| ||||||| ||||||||||||||||| |||||||| |
|
|
| T |
9581872 |
ggagcttgcttacaaagaagtgaattctattgatcggatagtaatgtacaagg-aaacattcttccaattggaggaataagtaattagttattttt---- |
9581778 |
T |
|
| Q |
712 |
ttttcaccaggagcaaaatgcaaaatgattgcagtgattgggatattacgttgtatgcaaagtgtcttgtcaattggtaccccggagatttcttaaattg |
811 |
Q |
| |
|
||||||| | |||||||||| |||||||||||||||| || ||| |||||||||||||||||| | | || ||||| ||| ||| | |
|
|
| T |
9581777 |
-----accagga-------gtaaaatgattgtggtgattgggatattaccttatatacaaagtgtcttgtcaatttgaattccagagatcgcttgaatcg |
9581690 |
T |
|
| Q |
812 |
gtagcgggccattatccttgtatcgtcgctgatgcatatatggttttgtttttggctcatctggtgctgtttttctggtttg-tggttactgtttggcag |
910 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||| | | ||||| || |||||||||||||||||||| ||||||||| || || | |||||| | |
|
|
| T |
9581689 |
gtagcaggccattgtccttgtatcgtcgctgatgattctgtggttctg-ttttggctcatctggtgctg-ttttctggtctgctgttgcctgtttttc-- |
9581594 |
T |
|
| Q |
911 |
tgggggttctggaagtttcttgggtcgatcccaccgtttttctgtcgagcctccaggcttgttttgtgcggcttccttgcagcctagca |
999 |
Q |
| |
|
||| |||||||||||| ||||||||||||||||||||||||| ||| | |||||||||| |||| ||||||||||| |||||||| |
|
|
| T |
9581593 |
tgg----tctggaagtttcctgggtcgatcccaccgtttttctgtgcagcgttcaggcttgttgtgtgtggcttccttgcggcctagca |
9581509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 26 - 999
Target Start/End: Complemental strand, 9588164 - 9587204
Alignment:
| Q |
26 |
ttatcttcatggatttggttacgacgaccttagaaatgattataatgtcatatgttacataactattacgggtcaacacactagctatggacatatgtct |
125 |
Q |
| |
|
|||||||||||||||||| |||||| | ||||||||||| ||||| ||||| ||| || |||||||||||||| ||||| || |||||||| ||||||| |
|
|
| T |
9588164 |
ttatcttcatggatttggctacgacaatcttagaaatgactataaggtcatctgtcacgtaactattacgggtgaacacgctggctatggatgtatgtct |
9588065 |
T |
|
| Q |
126 |
ttagatccaatttgggtgaaatatagcttaagaactaactcgtggaaaaggatactta---tttttgacatgccttgttccttggcacatattgacggca |
222 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| ||| | |||||||||||| ||||||| ||||||||||| |
|
|
| T |
9588064 |
ttagacccaatttgggtgatatatagcttaagaactaactcgtgga---ggatacttgatgtttctagcatgccttgttcattggcacgtattgacggca |
9587968 |
T |
|
| Q |
223 |
gtcaagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgaggt |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||| |||| | || ||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
9587967 |
ctcaagtctacatggatggtgtgtgtcattggttggctgaagaagttgatgataccctggagggaccatgtgtggtatcattttacttgagcaatgagga |
9587868 |
T |
|
| Q |
323 |
attcttcataacacccataccctcgtacttagatgattgtttcaaagct------ttgtggataaacttggtggtgttaaatgggtccgtttcattgatc |
416 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||| |||||||||||||||| || |||||||| |
|
|
| T |
9587867 |
attcttcataacatacataccctcatacttagatgattgtttcaatcttcacaccttgtggataaacttggcggtgttaaatgggtccattgcattgatc |
9587768 |
T |
|
| Q |
417 |
tcatatcataaagagacgaataattttcaaatatcaattttggtggt-----gttaaatggattcgtggaccaaactctttattgttggatcgttgtctt |
511 |
Q |
| |
|
||||||||| ||||||||| |||||||| ||||||||||||| | || || ||| || |||||||||||||| || |||||| ||||||||| |
|
|
| T |
9587767 |
tcatatcatgaagagacgacaaattttcacatatcaattttgggtgaatacggtataaaggagtcatggaccaaactcttcatggttggaccgttgtctt |
9587668 |
T |
|
| Q |
512 |
tcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgatttaagtactcagtcgatttt |
611 |
Q |
| |
|
||||||||||||||| || || || || |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| | |
|
|
| T |
9587667 |
gcattgagcgtcctattggagtgggaacgaaaggagaaatattcgtcatcagacaagataaagaactagtttgtcttgatttaagtactcaaatgattgt |
9587568 |
T |
|
| Q |
612 |
ggagctttcttacaaagaagtgaattctattggtcgaatactaatatacagggaaaacattattccaatcggaggaataagtaattatttatttttcttg |
711 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||| ||| |||| |||| || ||||||| ||||||| ||||||||||||||||| |||||||| |
|
|
| T |
9587567 |
ggagcttgcttacaaagaagtgaattctattgatcggatagtaatgtacaagg-aaacattcttccaattggaggaataagtaattagttattttt---- |
9587473 |
T |
|
| Q |
712 |
ttttcaccaggagcaaaatgcaaaatgattgcagtgattgggatattacgttgtatgcaaagtgtcttgtcaattggtaccccggagatttcttaaattg |
811 |
Q |
| |
|
||||||| | |||||||||| |||||||||||||||| || ||| |||||||||||||||||| | | || ||||| ||| ||| | |
|
|
| T |
9587472 |
-----accagga-------gtaaaatgattgtggtgattgggatattaccttatatacaaagtgtcttgtcaatttgaattccagagatcgcttgaatcg |
9587385 |
T |
|
| Q |
812 |
gtagcgggccattatccttgtatcgtcgctgatgcatatatggttttgtttttggctcatctggtgctgtttttctggtttg-tggttactgtttggcag |
910 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||| | | ||||| || |||||||||||||||||||| ||||||||| || || | |||||| | |
|
|
| T |
9587384 |
gtagcaggccattgtccttgtatcgtcgctgatgattctgtggttctg-ttttggctcatctggtgctg-ttttctggtctgctgttgcctgtttttc-- |
9587289 |
T |
|
| Q |
911 |
tgggggttctggaagtttcttgggtcgatcccaccgtttttctgtcgagcctccaggcttgttttgtgcggcttccttgcagcctagca |
999 |
Q |
| |
|
||| |||||||||||| ||||||||||||||||||||||||| ||| | |||||||||| |||| ||||||||||| |||||||| |
|
|
| T |
9587288 |
tgg----tctggaagtttcctgggtcgatcccaccgtttttctgtgcagcgttcaggcttgttgtgtgtggcttccttgcggcctagca |
9587204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 24 - 705
Target Start/End: Original strand, 9568781 - 9569473
Alignment:
| Q |
24 |
tcttatcttcatggatttggttacgacgaccttagaaatgattataatgtcatatgttacataactattacgggtcaacacactagctatggacatatgt |
123 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||| || |||||| |||| | ||| || | || || ||||| |
|
|
| T |
9568781 |
tcttatcttcatggatttggttacgatgaacttagaaatgactataatgtcatttgttatgtatctattatgggtgagcacgctggttacggtgatatga |
9568880 |
T |
|
| Q |
124 |
ctttagatccaatttgggtgaaatatagcttaagaactaactcgtggaaaaggatactta---tttttgacatgccttgttccttggcacatattgacgg |
220 |
Q |
| |
|
||||||| || | ||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||| ||||||||| |
|
|
| T |
9568881 |
ctttagacccgttctggaagatatatagcttaagaactaactcgtgga---ggatacttgatgtttttgacatgccttattctttggcatgtattgacgg |
9568977 |
T |
|
| Q |
221 |
cagtcaagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgag |
320 |
Q |
| |
|
|| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9568978 |
cactcaagtctacatgaatggtgtgtgtcattggttgtgtgaagaagaagaagatagtcaggatggaccatgtttggtatcattttacttgagcaatgag |
9569077 |
T |
|
| Q |
321 |
gtattcttcataacacccataccctcgtacttagatgattgtttcaa------agctttgtggataaacttggtggtgttaaatgggtccgtttcattga |
414 |
Q |
| |
|
|||||||||||||||| | ||||| ||||| |||||||||||| | ||| |||||||||||||||||||||||||| ||| || || | |||| |
|
|
| T |
9569078 |
aaattcttcataacacccgttccctcatacttggatgattgtttcgatgttcaagcattgtggataaacttggtggtgttaaacggggccattgcgttga |
9569177 |
T |
|
| Q |
415 |
tctcatatcataaagagacgaataattttcaaatatcaattttgg-------tggtgttaaatggattcgtggaccaaactctttattgttggatcgttg |
507 |
Q |
| |
|
||||||||||| ||||||||| ||||||||| ||||| ||||||| ||| |||| ||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
9569178 |
tctcatatcatgaagagacgactaattttcacatatcgattttgggtgaatatggcattaa--ggaatcgtggaccaaactcttccttgttggaccgttg |
9569275 |
T |
|
| Q |
508 |
tctttcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgatttaagtactcagtcga |
607 |
Q |
| |
|
|||| |||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| || |
|
|
| T |
9569276 |
tcttgcattgagcgtcctatcggagtggggacaaaaggagaaatattcgtcatcagaaaagataaagagctagtttgtattgatttaagtactcaaatga |
9569375 |
T |
|
| Q |
608 |
ttttggagctttcttacaaagaagtgaattctattggtcgaatactaatatacagggaaaacattattccaatcggaggaataagtaattatttattt |
705 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||| | | ||| ||||||||| |||||| ||| ||||||| ||||||||||||||||| |||||| |
|
|
| T |
9569376 |
ttgtggagcttgtttacaaagaagtgaattctattgataggatagtaatatacaaggaaaatattcttccaattggaggaataagtaattagttattt |
9569473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 25 - 365
Target Start/End: Original strand, 9573913 - 9574253
Alignment:
| Q |
25 |
cttatcttcatggatttggttacgacgaccttagaaatgattataatgtcatatgttacataactattacgggtcaacacactagctatggacatatgtc |
124 |
Q |
| |
|
|||||||||||||||||||||| ||| | ||||||||||| ||| ||||| | ||||| || |||| | |||| ||| | ||||||| ||| ||||||| |
|
|
| T |
9573913 |
cttatcttcatggatttggttatgacaatcttagaaatgactattatgtcttttgttatgtatctatcaagggtgaacgcgctagctacggaaatatgtc |
9574012 |
T |
|
| Q |
125 |
tttagatccaatttgggtgaaatatagcttaagaactaactcgtggaaaaggatactta---tttttgacatgccttgttccttggcacatattgacggc |
221 |
Q |
| |
|
|||||| ||| | |||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||| |||||||||| |
|
|
| T |
9574013 |
tttagacccattctgggagatatatagcttaagaactaactcgtgga---ggatacttgatgtttttgacatgccttattcgttggcaggtattgacggc |
9574109 |
T |
|
| Q |
222 |
agtcaagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgagg |
321 |
Q |
| |
|
| |||||| | ||||||||||||||||||||| | ||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
9574110 |
actcaagtttgcatggatggtgtgtgtcattgatagtgtgaagaaggtgaagatagtcaagatcgagcatgtttggtatcattttacttgagcaatgagg |
9574209 |
T |
|
| Q |
322 |
tattcttcataacacccataccctcgtacttagatgattgtttc |
365 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
9574210 |
aattcttcataacacccataccctcatacttagatgatagtttc |
9574253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 690 - 1058
Target Start/End: Original strand, 9569616 - 9569996
Alignment:
| Q |
690 |
aagtaattatttatttttcttgttttcaccaggagcaaaatgcaaaatgattgcagtgattgggatattacgttgtatgcaaagtgtcttgtcaattggt |
789 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
9569616 |
aagtaattagttatttttcttgttttcacgaggagcaaaatg-------attgtggtgattgggatattaccttgtatgcaaagtgtcttgtcta--gga |
9569706 |
T |
|
| Q |
790 |
accccggagatttcttaaattggtagcgggccattatccttgtatcgtcgctgatgcatatatggttttgtttttggctcatc----------------- |
872 |
Q |
| |
|
| || ||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||| ||| |
|
|
| T |
9569707 |
atcctggagattgctttaatcggtagcgggccattatccttgtatcgtcgctgatgcttatgtggttctgt-tttggctaatccaggtctgtttttctgg |
9569805 |
T |
|
| Q |
873 |
-----tggtgctgtttttctggtttgtggttactgtttggcagtgggggttctggaagtttcttgggtcgatcccaccgtttttctgtcgagcctccagg |
967 |
Q |
| |
|
|| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
9569806 |
tctgctgttgctgtctttctggtatgtggttactgtttggcagtgggggttctggaagtttcttcggtcgatcccaccgtttttctgggcagcctccagg |
9569905 |
T |
|
| Q |
968 |
cttgttttgtgcggcttccttgcagcctagcaaactttgctgcggtcgagttttcttctgtttcattgatggagacagttggagtacttgc |
1058 |
Q |
| |
|
|||||||| ||||||||||||| |||| ||||| ||| | || |||| |||||||||||||| |||| |||| |||||| ||||| |||| |
|
|
| T |
9569906 |
cttgttttttgcggcttccttgtggcctggcaaagtttaccgctgtcgtgttttcttctgtttgattggtggatacagttagagtatttgc |
9569996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 226 - 580
Target Start/End: Complemental strand, 54295367 - 54295002
Alignment:
| Q |
226 |
aagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgaggtatt |
325 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||||||| | || |
|
|
| T |
54295367 |
aagtctacatggatggtgtgtgtcattggttgtgtgaagtgcatgaagataatctgcatggaccatgtttggtatcattttacttgagcaatgagatgtt |
54295268 |
T |
|
| Q |
326 |
cttcataacacccataccctcgtacttagatgattgtt------tcaaagctttgtggataaacttggtggtgttaaatgggtccgtttcattgatctca |
419 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||| | |||| |||||||||| ||||| ||| ||||||||| | || ||||||||||| |
|
|
| T |
54295267 |
tttcataacacccatatcctcaaacttagatgattgttttgatgttcaagcattgtggataaccttggcggtactaaatgggtgcattgcattgatctca |
54295168 |
T |
|
| Q |
420 |
tatcataaagagacgaataattttcaaatatcaattttgg-------tggtgttaaatggattcgtggaccaaactctttattgttggatcgttgtcttt |
512 |
Q |
| |
|
|||||| ||||| | | ||||||||| ||||||||||||| ||||| || || |||||||||||||| || ||||||||| ||||||||| |
|
|
| T |
54295167 |
tatcatgaagagtccactaattttcacatatcaattttgggtgaattcggtgt--gatagaatcgtggaccaaacttttcattgttggaccgttgtctta |
54295070 |
T |
|
| Q |
513 |
cattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtag |
580 |
Q |
| |
|
|||||| ||||||||| || ||||| || || ||||||||| || | ||| ||||||||||||||| |
|
|
| T |
54295069 |
tgttgagcatcctatcggagtggggacgaagggggaaatattcttcgtaagaaaagataaagaagtag |
54295002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 774 - 955
Target Start/End: Complemental strand, 9606190 - 9606009
Alignment:
| Q |
774 |
tgtcttgtcaattggtaccccggagatttcttaaattggtagcgggccattatccttgtatcgtcgctgatgcatatatggttttgtttttggctcatct |
873 |
Q |
| |
|
||||||||||||| | | | |||||||| ||| ||| ||||||| ||||||||||||||||||| |||||||| ||| | || |||||||||||||||| |
|
|
| T |
9606190 |
tgtcttgtcaattagaatctcggagattgcttgaatcggtagcgagccattatccttgtatcgttgctgatgcttatgtccttctgtttttggctcatct |
9606091 |
T |
|
| Q |
874 |
ggtgctgtttttctggtttgtggttactgtttggcagtgggggttctggaagtttcttgggtcgatcccaccgtttttctgt |
955 |
Q |
| |
|
| ||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
9606090 |
gttgctgcttttctggtctgtggttgctgtttggcggtgggggttctggaagtttcttgggtcaatcccactgtttttctgt |
9606009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 37895836 - 37895910
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgattgttt |
364 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||| ||||| |
|
|
| T |
37895836 |
atgtttggtatcattttacctgagcaatgaggtgttcttcgtaacacccataccctcagacttagatgactgttt |
37895910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 366 - 459
Target Start/End: Original strand, 37897882 - 37897975
Alignment:
| Q |
366 |
aaagctttgtggataaacttggtggtgttaaatgggtccgtttcattgatctcatatcataaagagacgaataattttcaaatatcaattttgg |
459 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||| |||| || ||||| ||||||||||| ||||||||| || |||||| ||||| |||||| |
|
|
| T |
37897882 |
aaagctttgtggataaacttggcggtgttatatgagtccattgcattgttctcatatcatgaagagacgactacttttcacgtatcagttttgg |
37897975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 225 - 328
Target Start/End: Original strand, 37897699 - 37897805
Alignment:
| Q |
225 |
caagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaaga---tagtcaagatggaagatgtttggtatcattttacttgagcaatgagg |
321 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||| | |||||| |||| |||| |||||||||||||||||||| | |
|
|
| T |
37897699 |
caagtctacttggatggagtgtgtcattggttgtgtaaagaagatgaagaagatagccctgatggaccatgtctggtgtcattttacttgagcaatgatg |
37897798 |
T |
|
| Q |
322 |
tattctt |
328 |
Q |
| |
|
| ||||| |
|
|
| T |
37897799 |
tgttctt |
37897805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 106; Significance: 2e-52; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 212 - 599
Target Start/End: Original strand, 29012615 - 29013007
Alignment:
| Q |
212 |
tattgacggcagtcaagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttg |
311 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||| || | || | | ||||||||||||||||||||| |
|
|
| T |
29012615 |
tattgacggcacccaagtctacatggatggagtgtgtcattggttgtctgaagaagat------agcaatgaggaatcatgtttggtatcattttacttt |
29012708 |
T |
|
| Q |
312 |
agcaatgaggtattcttcataacacccataccctcgtacttagatgattgtttcaa------agctttgtggataaacttggtggtgttaaatgggtccg |
405 |
Q |
| |
|
|||||||||| ||||||| ||||||| |||| || | |||| ||||| | | ||| |||||| ||||||||| ||| |||||||||||| |
|
|
| T |
29012709 |
agcaatgaggggttcttcacaacacccttaccgtcagaagtagaggattggtctgatgatttagcattgtggttaaacttggcggtattaaatgggtcca |
29012808 |
T |
|
| Q |
406 |
tttcattgatctcatatcataaagagacgaataattttcaaatatcaattttggtgg-------tgttaaatggattcgtggaccaaactctttattgtt |
498 |
Q |
| |
|
|| ||||| ||||||||||||||||||||| ||||||||| ||||||||||||| || ||| || ||| || |||||||||||||| |||||| |
|
|
| T |
29012809 |
ttgcattggtctcatatcataaagagacgactaattttcacatatcaattttgggggatttcggtgtgaa--ggaatcatggaccaaactcttcattgtt |
29012906 |
T |
|
| Q |
499 |
ggatcgttgtctttcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgatttaagta |
598 |
Q |
| |
|
||| ||||||||| | || ||||||||||||| || ||||| ||||||||||||||| |||||||| ||||| ||||| ||||||| |||||||| |||| |
|
|
| T |
29012907 |
ggaccgttgtcttgcgttaagcgtcctatcggagtggggacgaaaggagaaatattcttcatcagaaaagatgaagaactagtttggcttgatttgagta |
29013006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 229 - 599
Target Start/End: Original strand, 34281712 - 34282093
Alignment:
| Q |
229 |
tctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgaggtattctt |
328 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| || || |||||| || |||| |||||||||||||||||||||||||||||| || | ||| |
|
|
| T |
34281712 |
tctacatggacggtgtgtgtcattggttgtgtgaaaaacataaagataatcccattggaccatgtttggtatcattttacttgagcaatgaagtgtcctt |
34281811 |
T |
|
| Q |
329 |
cataacacccataccctcgtacttagatgattgtt------tcaaagctttgtggataaacttggtggtgttaaatgggtccgtttcattgatctcatat |
422 |
Q |
| |
|
|| |||| |||||||| | || |||||||||||| | ||||| ||||| ||||||||||||||||||||||| | | |||||||||||||| |
|
|
| T |
34281812 |
cacaacagccatacccccagacgtagatgattgttttgatgttaaagcaaagtggaaaaacttggtggtgttaaatgggtacatagcattgatctcatat |
34281911 |
T |
|
| Q |
423 |
cataaagagacgaataattttcaaatatcaattttgg-------tggtgttaaatggattcgtggaccaaactctttattgttggatcgttgtctttcat |
515 |
Q |
| |
|
| ||||||||| | || ||||| |||||||||||| ||| | ||| || ||||||| |||||||||||| |||||| ||||| ||| | | |
|
|
| T |
34281912 |
cgtaaagagacaagtacttttcgtgtatcaattttgggtcaactcggtttcaaa--gaatcgtggatcaaactctttatggttggaccgttgccttacgt |
34282009 |
T |
|
| Q |
516 |
tgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgatttaagtac |
599 |
Q |
| |
|
||||||||||||||| || |||||||| || ||||||||| |||| ||| ||||||||||||| | ||| ||||||| ||||| |
|
|
| T |
34282010 |
tgagcgtcctatcggagtggggacaaagggggaaatattcttcataagaaaagataaagaagtggcttggtttgatttgagtac |
34282093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 225 - 599
Target Start/End: Original strand, 29131098 - 29131483
Alignment:
| Q |
225 |
caagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgaggtat |
324 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| || ||||||| | || |||| |||||||||||||||||||||||||||||| || | |
|
|
| T |
29131098 |
caagtctatatggatggtgtgtgtcattggttgtgtgaaaaacatgaagaaaatcccattggaccatgtttggtatcattttacttgagcaatgaagtgt |
29131197 |
T |
|
| Q |
325 |
tcttcataacacccataccctcgtacttagatgattgtttc------aaagctttgtggataaacttggtggtgttaaatgggtccgtttcattgatctc |
418 |
Q |
| |
|
|| ||| ||||||||||||||| || ||||||||||||| |||| ||||||||||||| ||||| |||| |||| || ||||||| || |
|
|
| T |
29131198 |
tcgtcacaacacccataccctcagacgtagatgattgttttgatgttaaagaaaattggataaacttggcagtgttgaatgtgtccattgcattgatgtc |
29131297 |
T |
|
| Q |
419 |
atatcataaagagacgaataattttcaaatatcaattttgg-------tggtgttaaatggattcgtggaccaaactctttattgttggatcgttgtctt |
511 |
Q |
| |
|
||||||| ||| || | || |||||| ||||||||||||| ||| | ||| || ||||||||||| |||| ||||||||| | |||||| |
|
|
| T |
29131298 |
atatcatgaaggcacaactacttttcacatatcaattttgggtgaatttggcataaaa--gaatcgtggaccaagatcttcattgttggaccattgtctg |
29131395 |
T |
|
| Q |
512 |
tcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgatttaagtac |
599 |
Q |
| |
|
| ||||||||||||| || || ||||||||||||||||||||| || | ||| ||||| ||||| ||||||| |||||||||||||| |
|
|
| T |
29131396 |
gcgttgagcgtcctattggagtggggacaaaaggagaaatattcttcctaagaaaagatgaagaactagtttggcttgatttaagtac |
29131483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 225 - 555
Target Start/End: Original strand, 29145083 - 29145427
Alignment:
| Q |
225 |
caagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagat---agtcaagatggaagatgtttggtatcattttacttgagcaatgagg |
321 |
Q |
| |
|
||||| ||| ||| ||| |||||||||||||||| |||| |||||||||| | || |||||| ||||||||| |||||||||||||| | ||||| |
|
|
| T |
29145083 |
caagtatacctgggtggagtgtgtcattggttgtctgaaaaagatgaagaagaaaatcctgatggaccatgtttggtgtcattttacttgagtagtgagg |
29145182 |
T |
|
| Q |
322 |
tattcttcataacacccataccctcgtacttagatgattgtttc------aaagctttgtggataaacttggtggtgttaaatgggtccgtttcattgat |
415 |
Q |
| |
|
| ||||| |||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||| ||| |||||| | | || ||||||| |
|
|
| T |
29145183 |
tgttcttagtaacacccataccctcagacttagatgattgtttcgatgttgaagcattgtggataaacctggcagtgataaatgatttcattgcattgat |
29145282 |
T |
|
| Q |
416 |
ctcatatcataaagagacgaataattttcaaatatcaattttggtggtgtta-----aatggattcgtggaccaaactctttattgttggatcgttgtct |
510 |
Q |
| |
|
|||||||||| || | || | ||||||||| ||||||||||||| | ||| | ||| || |||||||||||||||||| ||||| | | ||| |
|
|
| T |
29145283 |
ctcatatcatgaacaaactactaattttcacatatcaattttgggtggattaggtatgaaggaatcatggaccaaactctttattcttggaccactatct |
29145382 |
T |
|
| Q |
511 |
ttcattgagcgtcctatcggggttgggacaaaaggagaaatattc |
555 |
Q |
| |
|
| |||| ||| ||||||||| ||||||| |||||| ||||||||| |
|
|
| T |
29145383 |
tgcattaagcatcctatcggagttgggataaaaggggaaatattc |
29145427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 225 - 459
Target Start/End: Original strand, 29299865 - 29300108
Alignment:
| Q |
225 |
caagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaaga---tagtcaagatggaagatgtttggtatcattttacttgagcaatgagg |
321 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |||||||| | ||| | | |||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
29299865 |
caagtctacatggatggagtgtgccattggttgtgtgaaaaagatgaaaaacatagccccgctggaccatgtttggtgtcattttacttgagcaatgagg |
29299964 |
T |
|
| Q |
322 |
tattcttcataacacccataccctcgtacttagatgattgtttcaa------agctttgtggataaacttggtggtgttaaatgggtccgtttcattgat |
415 |
Q |
| |
|
| ||| | |||||||| || ||||| || |||||||||||| | ||| |||||||||||||| ||||||||||||||| || | ||||| |
|
|
| T |
29299965 |
tgttccttataacacctatttcctcggacgaagatgattgttttgatgttggagcaaagtggataaacttggctgtgttaaatgggtccattgccttgat |
29300064 |
T |
|
| Q |
416 |
ctcatatcataaagagacgaataattttcaaatatcaattttgg |
459 |
Q |
| |
|
||||| ||| ||| |||||| || |||||| ||||||||||||| |
|
|
| T |
29300065 |
ctcatttcaaaaaaagacgactacttttcacatatcaattttgg |
29300108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 290 - 602
Target Start/End: Complemental strand, 29152352 - 29152029
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgattgtttc------aaagctttgtggataaac |
383 |
Q |
| |
|
|||||||||||||||||||||||||||||| || | | ||| ||||||||||| | | || ||||||| ||||| ||||| |||||||||| |
|
|
| T |
29152352 |
atgtttggtatcattttacttgagcaatgaagtgtccctcacaacacccatactcccagacgtagatgactgttttgatgttaaagcaaagtggataaac |
29152253 |
T |
|
| Q |
384 |
ttggtggtgttaaatgggtccgtttcattgatctcatatcataaagagacgaataattttcaaatatcaattttgg------tggtgttaaatggattcg |
477 |
Q |
| |
|
|||| ||||||||||||||| | |||||||||||||| || ||||||||| || ||||| |||||||||||| | | ||| | || ||| |
|
|
| T |
29152252 |
ttgggtgtgttaaatgggtccatagcattgatctcatataatgaagagacgactacttttcgtgtatcaattttgggtcaactcg-gtttcagagaatcg |
29152154 |
T |
|
| Q |
478 |
tggaccaaactctttattgttggatcgttgtctttcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaag |
577 |
Q |
| |
|
|||| ||||||||| || |||||| ||||| ||| | |||||||||||||||| || |||| ||| || ||||||||| | || ||| |||||||||||| |
|
|
| T |
29152153 |
tggatcaaactcttcatggttggaccgttgccttacgttgagcgtcctatcggagtggggaaaaatggggaaatattctttataagaaaagataaagaag |
29152054 |
T |
|
| Q |
578 |
tagtttgtcttgatttaagtactca |
602 |
Q |
| |
|
||| ||| ||||| | |||||||| |
|
|
| T |
29152053 |
tagcttggtttgatctgagtactca |
29152029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 291 - 598
Target Start/End: Complemental strand, 34278669 - 34278351
Alignment:
| Q |
291 |
tgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgattgtttcaaagcttt------gtggataaact |
384 |
Q |
| |
|
||||||||||||||||||||||||||||| | | ||||| ||||||||| ||| || | ||||||||||||| | | | ||||||||||| |
|
|
| T |
34278669 |
tgtttggtatcattttacttgagcaatgaagcgtccttcacaacacccattcccccggaagtagatgattgttttgatgatagcgcaaagtggataaact |
34278570 |
T |
|
| Q |
385 |
tggtggtgttaaatgggtccgtttcattgatctcatatcataaagagacgaataattttcaaatatcaattttgg-------tggtgttaaatggattcg |
477 |
Q |
| |
|
|||||||||||||||||||| | |||||||| ||||||||||||||| || || ||||| |||| ||||||| ||| | ||| || || |
|
|
| T |
34278569 |
tggtggtgttaaatgggtccatagcattgatcacatatcataaagagatgactacttttcgtgtatcgattttgggtcaactcggtttcaaa--gaatct |
34278472 |
T |
|
| Q |
478 |
tggaccaaactctttattgttggatcgttgtctttcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaag |
577 |
Q |
| |
|
|||| ||||||||| || |||||| ||||| ||| | |||||||||||||||| || |||||||| || |||||||| |||| | | |||||||||||| |
|
|
| T |
34278471 |
tggatcaaactcttcatggttggaccgttgccttacgttgagcgtcctatcggagtggggacaaaggggaaaatattcttcataataaaagataaagaag |
34278372 |
T |
|
| Q |
578 |
tagtttgtcttgatttaagta |
598 |
Q |
| |
|
||| ||| ||||||| |||| |
|
|
| T |
34278371 |
tagcttggtttgatttgagta |
34278351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 475 - 599
Target Start/End: Complemental strand, 32740741 - 32740617
Alignment:
| Q |
475 |
tcgtggaccaaactctttattgttggatcgttgtctttcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaag |
574 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||||| || | |||||||| || || ||||| ||||||||||||||| || | ||| ||||| ||| |
|
|
| T |
32740741 |
tcgtggaccaaactcttcattgttggaccattgtctggtgttcaacgtcctattggagtggggacgaaaggagaaatattcttcctaagaaaagatgaag |
32740642 |
T |
|
| Q |
575 |
aagtagtttgtcttgatttaagtac |
599 |
Q |
| |
|
|| ||||||| ||||||||| |||| |
|
|
| T |
32740641 |
aactagtttggcttgatttatgtac |
32740617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 375 - 455
Target Start/End: Complemental strand, 32744992 - 32744912
Alignment:
| Q |
375 |
tggataaacttggtggtgttaaatgggtccgtttcattgatctcatatcataaagagacgaataattttcaaatatcaatt |
455 |
Q |
| |
|
|||| |||||||| |||||||||||||||| || |||||||||||||| || || |||||| || |||||| ||||||||| |
|
|
| T |
32744992 |
tggagaaacttggcggtgttaaatgggtccattgcattgatctcatattatgaaaagacgactacttttcacatatcaatt |
32744912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 34258477 - 34258359
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgattgtt------tcaaagctttgtggataaac |
383 |
Q |
| |
|
|||||||||||||||| |||| |||||||| || ||||||| |||||| |||||||| ||| | |||||||||| | ||||| |||||||||| |
|
|
| T |
34258477 |
atgtttggtatcatttgacttaagcaatgatgtgttcttcaaaacaccaataccctcatacgttgatgattgttttgatgttaaagcaaagtggataaac |
34258378 |
T |
|
| Q |
384 |
ttggtggtgttaaatgggt |
402 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
34258377 |
ttggcggtgttaaatgggt |
34258359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 23218818 - 23218748
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgatt |
360 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||||||||| || |||||||||||| |
|
|
| T |
23218818 |
atgtttggtgtcattttacttgagcaatgaggtgttcttagtaacacccatactttcaaacttagatgatt |
23218748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 29123978 - 29124032
Alignment:
| Q |
292 |
gtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctc |
346 |
Q |
| |
|
|||||||||| |||||||||||||| || || ||||||||||||||||||||||| |
|
|
| T |
29123978 |
gtttggtatcgttttacttgagcaacgaagtgttcttcataacacccataccctc |
29124032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 25529031 - 25528975
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctc |
346 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||| || ||||||||||| |||| |
|
|
| T |
25529031 |
atgtttggtatcatttaacttgagcaatgaggtgttcgtcctaacacccatatcctc |
25528975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 26090931 - 26090880
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccata |
341 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||| ||||| |||||||||||| |
|
|
| T |
26090931 |
atgtctggtatcatttaacttgagcaatgaggtgttctttataacacccata |
26090880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 32960959 - 32960902
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcg |
347 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||| | |||||||||||| |||| |
|
|
| T |
32960959 |
atgtttggtatcattttatttgagcaatgaggtgttccttgtaacacccatacactcg |
32960902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 379 - 455
Target Start/End: Complemental strand, 25319437 - 25319361
Alignment:
| Q |
379 |
taaacttggtggtgttaaatgggtccgtttcattgatctcatatcataaagagacgaataattttcaaatatcaatt |
455 |
Q |
| |
|
|||||||||||||||||||||||| ||| | ||||||||||||||| || ||| || || |||||| |||||||| |
|
|
| T |
25319437 |
taaacttggtggtgttaaatgggtatgttgctttgatctcatatcatgaaaagatgactacttttcacgtatcaatt |
25319361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 379 - 455
Target Start/End: Complemental strand, 26149130 - 26149054
Alignment:
| Q |
379 |
taaacttggtggtgttaaatgggtccgtttcattgatctcatatcataaagagacgaataattttcaaatatcaatt |
455 |
Q |
| |
|
|||||||||||||||||||||||| ||| | ||||||||||||||| || ||| || || |||||| |||||||| |
|
|
| T |
26149130 |
taaacttggtggtgttaaatgggtatgttgctttgatctcatatcatgaaaagatgactacttttcacgtatcaatt |
26149054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 535 - 594
Target Start/End: Complemental strand, 19697436 - 19697377
Alignment:
| Q |
535 |
gggacaaaaggagaaatattcgtcatcagagaagataaagaagtagtttgtcttgattta |
594 |
Q |
| |
|
||||||||||||||||||||| |||| ||| | || ||||| ||||||||||||||||| |
|
|
| T |
19697436 |
gggacaaaaggagaaatattcttcattagaaagaatgaagaactagtttgtcttgattta |
19697377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 29137227 - 29137278
Alignment:
| Q |
374 |
gtggataaacttggtggtgttaaatgggtccgtttcattgatctcatatcat |
425 |
Q |
| |
|
||||||||||||||||||||||||| |||| || ||||||| ||||||||| |
|
|
| T |
29137227 |
gtggataaacttggtggtgttaaatttgtccattgcattgatatcatatcat |
29137278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 260
Target Start/End: Complemental strand, 32961029 - 32960998
Alignment:
| Q |
229 |
tctacatggatggtgtgtgtcattggttgtgt |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
32961029 |
tctacatggatggtgtgtgtcattggttgtgt |
32960998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 32745081 - 32745027
Alignment:
| Q |
292 |
gtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctc |
346 |
Q |
| |
|
|||||||||| |||||||||||||| || | ||||||||||||||| ||||||| |
|
|
| T |
32745081 |
gtttggtatcgttttacttgagcaaagaagggttcttcataacacccgtaccctc |
32745027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 29137133 - 29137178
Alignment:
| Q |
292 |
gtttggtatcattttacttgagcaatgaggtattcttcataacacc |
337 |
Q |
| |
|
|||||||||| ||||||||||||| ||| || |||||||||||||| |
|
|
| T |
29137133 |
gtttggtatcgttttacttgagcagtgaagtgttcttcataacacc |
29137178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 70; Significance: 6e-31; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 290 - 720
Target Start/End: Original strand, 42446193 - 42446633
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgattgtttcaa------agctttgtggataaac |
383 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||| ||||||||| ||||||| | || | |||||||||| |
|
|
| T |
42446193 |
atgtttggtatcatttgacttgagcaatgatgtattcttcaccacacctataccctcagacttagatggttgtttctatgttggagaatcgtggataaac |
42446292 |
T |
|
| Q |
384 |
ttggtggtgttaaatgggtccgtttcattgatctcatatcataaagagacgaataattttcaaatatcaattttggtgg----tgtta-aatggattcgt |
478 |
Q |
| |
|
||||| |||||||| | |||| || | |||||||||| |||| || ||||| | |||||| ||||||||||||| | || || | ||| || | |
|
|
| T |
42446293 |
ttggttgtgttaaacgagtccattgccttgatctcatttcatgaaaagacggct-tttttcacatatcaattttgggtgaacttgctatcaaggaatcat |
42446391 |
T |
|
| Q |
479 |
ggaccaaactctttattgttggatcgttgtctttcattgagcgtcctatcggggttgggacaaaaggagaaatattcgtcatcagagaagataaagaagt |
578 |
Q |
| |
|
||||||||||| | ||||||||| ||||| || ||||||||||||||| || |||| ||||||||||||||| |||| ||| ||||| |||| | |
|
|
| T |
42446392 |
ggaccaaactcgtcattgttggaccgttgcattgtgttgagcgtcctatcgaagtggggatgaaaggagaaatattcttcattagaaaagatggagaact |
42446491 |
T |
|
| Q |
579 |
agtttgtcttgatttaagtactcagtcgattttggagctttcttacaaagaagtgaattctattggtcgaatactaatatacagggaaaacattattcca |
678 |
Q |
| |
|
|| ||| |||||||||||||| || |||| || |||| ||| |||| || | | ||| || ||| || ||||||||| |||||||||| ||||| |
|
|
| T |
42446492 |
agcttggcttgatttaagtaccaagatgattgaggggcttggttataaaggagggggtcctactgctcgggtaataatatacaaggaaaacattcttcca |
42446591 |
T |
|
| Q |
679 |
atcggaggaataagtaattatttatttttcttgttttcacca |
720 |
Q |
| |
|
|| |||||||||| |||||| || |||||||||||||||||| |
|
|
| T |
42446592 |
attggaggaataattaattaattgtttttcttgttttcacca |
42446633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 555
Target Start/End: Original strand, 7793675 - 7793951
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgattgt------ttcaaagctttgtggataaac |
383 |
Q |
| |
|
||||||| |||| ||||||||||||||||||| |||||||||||||| ||||| || | |||||||||| || ||||||| ||||||||| |
|
|
| T |
7793675 |
atgtttgctatctttttacttgagcaatgaggcgttcttcataacacctataccttcagatgaagatgattgttttaaatttaaagcttcgtggataaat |
7793774 |
T |
|
| Q |
384 |
ttggtggtgttaaatgggtccgtttcattgatctcatatcataaagagacgaataattttcaaatatcaattttgg-------tggtgttaaatggattc |
476 |
Q |
| |
|
||||||||||||||||| | | |||| |||||| ||| |||| ||| ||| |||||||| || ||| | ||||||| ||||| || || || |
|
|
| T |
7793775 |
ttggtggtgttaaatggctacatttccttgatcacatttcatgaagtgactaataatttccatatagccattttggataaattcggtgtgaa--gggatc |
7793872 |
T |
|
| Q |
477 |
gtggaccaaactctttattgttggatcgttgtctttcattgagcgtcctatcggggttgggacaaaaggagaaatattc |
555 |
Q |
| |
|
|||||| |||||||| ||| ||||| | || |||||||| ||||||||||| || || ||||| ||||| ||||||||| |
|
|
| T |
7793873 |
gtggactaaactcttcattattggaccattttctttcatcgagcgtcctattggagtggggacgaaaggggaaatattc |
7793951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 42446072 - 42446150
Alignment:
| Q |
187 |
ttgacatgccttgttccttggcacatattgacggcagtcaagtctacatggatggtgtgtgtcattggttgtgtgaaga |
265 |
Q |
| |
|
|||||||||||| ||| |||| | |||||| |||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42446072 |
ttgacatgccttattctttggaatgtattgagggcacccaagtctacatggatggagtgtgtcattggttgtgtgaaga |
42446150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0613 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0613
Description:
Target: scaffold0613; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 52 - 126
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgattgttt |
364 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
52 |
atgtttggtgtcattttacttgagcaatgaggtgttcttaataacacccataccctcaaacttagatgattgttt |
126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0134 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 16448 - 16374
Alignment:
| Q |
290 |
atgtttggtatcattttacttgagcaatgaggtattcttcataacacccataccctcgtacttagatgattgttt |
364 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
16448 |
atgtttggtgtcattttacttgagcaatgaggtgttcttaataacacccataccctcaaacttagatgattgttt |
16374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 48; Significance: 8e-18; HSPs: 5)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 225 - 551
Target Start/End: Complemental strand, 40100 - 39769
Alignment:
| Q |
225 |
caagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgaggtat |
324 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| ||| || | | |||| |||||| ||||||||||||||||| |||||||| | |
|
|
| T |
40100 |
caagtctacatggatggagtgtgtcattggttgtgtgaaga----gaa--tacccctgctggaccatgtttagtatcattttacttgagaaatgaggtgt |
40007 |
T |
|
| Q |
325 |
tcttcataacacccataccctcgtacttagatgattgtttcaaa------gctttgtggataaacttggtggtgttaaatgggtccgtttcattgatctc |
418 |
Q |
| |
|
||| |||||||||||||||||| | |||||||||||| ||| |||| |||||| |||||| |||||||||||||| |||| |||| | |
|
|
| T |
40006 |
tctgtataacacccataccctcggatgaagatgattgttttaaatttaaagcttcaaagataaatttggtgttgttaaatgggtccatttccttgactgc |
39907 |
T |
|
| Q |
419 |
atatcataaagagacgaataattttcaaatatcaattttggt-------ggtgttaaatggattcgtggaccaaactctttattgttggatcgttgtctt |
511 |
Q |
| |
|
| |||| ||||| | || |||||| ||| ||||||||| || |||| ||| ||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
39906 |
gtttcatcgggagactactacttttcacatagcaattttgggtgaactcggcattaa--ggaatcgtggatcaaactctttactgttggaccgttgtctt |
39809 |
T |
|
| Q |
512 |
tcattgagcgtcctatcggggttgggacaaaaggagaaat |
551 |
Q |
| |
|
| |||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
39808 |
gcgttgagcgtcctatcggagtggggacaaaaggggaaat |
39769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 33749 - 33633
Alignment:
| Q |
225 |
caagtctacatggatggtgtgtgtcattggttgtgtgaagaagatgaagatagtcaagatggaagatgtttggtatcattttacttgagcaatgaggtat |
324 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| ||| || | | |||| |||||| ||||||||||||||||| |||||||| | |
|
|
| T |
33749 |
caagtctacatggatggagtgtgtcattggttgtgtgaaga----gaa--tacccctgctggaccatgtttagtatcattttacttgagaaatgaggtgt |
33656 |
T |
|
| Q |
325 |
tcttcataacacccataccctcg |
347 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
33655 |
tctgtataacacccataccctcg |
33633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 475 - 551
Target Start/End: Complemental strand, 33494 - 33418
Alignment:
| Q |
475 |
tcgtggaccaaactctttattgttggatcgttgtctttcattgagcgtcctatcggggttgggacaaaaggagaaat |
551 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||||||| | |||||||||||||| | || ||||| ||||| ||||| |
|
|
| T |
33494 |
tcgtggaccaaactcttcactgttggaccgttgtcttgcgttgagcgtcctatcagagtggggacgaaaggggaaat |
33418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 656 - 720
Target Start/End: Complemental strand, 39664 - 39600
Alignment:
| Q |
656 |
tatacagggaaaacattattccaatcggaggaataagtaattatttatttttcttgttttcacca |
720 |
Q |
| |
|
|||||| |||||||||| || ||| | ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
39664 |
tatacaaggaaaacattcttgtaattgaaggaataagtaattaattatttttcttgttttcacca |
39600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 656 - 720
Target Start/End: Complemental strand, 33313 - 33249
Alignment:
| Q |
656 |
tatacagggaaaacattattccaatcggaggaataagtaattatttatttttcttgttttcacca |
720 |
Q |
| |
|
|||||| |||||||||| || | || | ||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
33313 |
tatacaaggaaaacattcttgccattgaaggaataagtaattaattatttttcatgttttcacca |
33249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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