View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12071_low_28 (Length: 263)
Name: NF12071_low_28
Description: NF12071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12071_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 41944921 - 41944673
Alignment:
| Q |
1 |
acgatgatagcaattgtaggctgagacagtatatgagtgaaattttgaggatgcttaaccactatatgaatgctaaaactatgaataatacagtataggt |
100 |
Q |
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| T |
41944921 |
acgatgatagcaattgtaggctgagacagaatatgagtgaaattttgaggatgcttaaccactatatgaatgctaaagctatgaataatgcagtataggt |
41944822 |
T |
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| Q |
101 |
acagcaaagattagagataaatattaattggcaaccacctgctaaaggatgggtccgacttaatacagatgatgcgagtaaggatggaagaagtgcgaga |
200 |
Q |
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| T |
41944821 |
acaacaaagattagagataaatattaattggcaaccacctgctaaaggatgggtccgacttaatacagatgatgcgagtaaggatggaagaagtgcgaga |
41944722 |
T |
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| Q |
201 |
tgtggatgatttattcgagttgagtatggaaaatagtgcagtggttttt |
249 |
Q |
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| T |
41944721 |
tgtggatgatttattcgagttgagtatggaaaatagtgcggtggttttt |
41944673 |
T |
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