View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12071_low_6 (Length: 648)

Name: NF12071_low_6
Description: NF12071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12071_low_6
NF12071_low_6
[»] chr1 (18 HSPs)
chr1 (289-631)||(31032929-31033269)
chr1 (1-288)||(30950750-30951054)
chr1 (59-296)||(29799070-29799305)
chr1 (61-140)||(44961470-44961548)
chr1 (61-140)||(1600569-1600650)
chr1 (61-135)||(10406174-10406247)
chr1 (61-135)||(11142697-11142770)
chr1 (75-140)||(15757758-15757822)
chr1 (171-264)||(23614402-23614495)
chr1 (61-140)||(19313401-19313479)
chr1 (135-198)||(29357169-29357232)
chr1 (137-256)||(47367639-47367757)
chr1 (75-140)||(10620145-10620209)
chr1 (61-135)||(10177922-10177995)
chr1 (53-118)||(28403128-28403192)
chr1 (61-135)||(23614656-23614729)
chr1 (59-129)||(33240877-33240946)
chr1 (151-200)||(19313217-19313266)
[»] chr7 (19 HSPs)
chr7 (1-288)||(28491167-28491471)
chr7 (1-288)||(13465310-13465614)
chr7 (59-288)||(25439580-25439806)
chr7 (136-266)||(37202571-37202700)
chr7 (61-140)||(46211663-46211741)
chr7 (61-140)||(758911-758989)
chr7 (61-140)||(29715831-29715909)
chr7 (61-140)||(48609091-48609169)
chr7 (59-140)||(37202823-37202903)
chr7 (75-140)||(39719961-39720025)
chr7 (61-118)||(83617-83673)
chr7 (135-252)||(25591918-25592035)
chr7 (158-204)||(29716051-29716097)
chr7 (59-140)||(34659394-34659474)
chr7 (135-263)||(45855342-45855470)
chr7 (144-198)||(27097050-27097104)
chr7 (144-198)||(27181199-27181253)
chr7 (135-289)||(40253844-40253998)
chr7 (4-33)||(25439537-25439566)
[»] chr3 (11 HSPs)
chr3 (1-289)||(40763664-40763969)
chr3 (59-288)||(20843204-20843432)
chr3 (66-289)||(3458100-3458324)
chr3 (151-264)||(16152063-16152176)
chr3 (61-140)||(17652973-17653051)
chr3 (75-140)||(21296014-21296078)
chr3 (75-140)||(46823886-46823950)
chr3 (4-52)||(20843132-20843180)
chr3 (135-263)||(19795412-19795540)
chr3 (61-135)||(16152317-16152390)
chr3 (144-198)||(29123428-29123482)
[»] chr6 (13 HSPs)
chr6 (1-289)||(1780584-1780889)
chr6 (61-140)||(29363531-29363609)
chr6 (158-266)||(29486224-29486332)
chr6 (59-136)||(24428827-24428903)
chr6 (61-140)||(34729857-34729935)
chr6 (135-263)||(904223-904352)
chr6 (135-263)||(33224522-33224650)
chr6 (135-265)||(22956637-22956766)
chr6 (135-265)||(23831626-23831755)
chr6 (142-212)||(24428622-24428692)
chr6 (135-195)||(8560093-8560153)
chr6 (226-264)||(27673842-27673880)
chr6 (59-140)||(29486475-29486554)
[»] chr8 (19 HSPs)
chr8 (1-288)||(12491418-12491722)
chr8 (135-288)||(6115131-6115284)
chr8 (62-140)||(38172793-38172870)
chr8 (61-135)||(38699750-38699823)
chr8 (143-265)||(41570189-41570311)
chr8 (60-133)||(13541419-13541491)
chr8 (60-133)||(13682982-13683054)
chr8 (135-288)||(32415644-32415797)
chr8 (60-140)||(18881858-18881937)
chr8 (75-140)||(4072227-4072291)
chr8 (75-140)||(21441593-21441657)
chr8 (75-140)||(41323181-41323245)
chr8 (135-219)||(1233756-1233840)
chr8 (61-129)||(43115234-43115301)
chr8 (90-132)||(33613707-33613749)
chr8 (135-219)||(13641112-13641196)
chr8 (135-219)||(13741524-13741608)
chr8 (94-140)||(41570441-41570487)
chr8 (135-192)||(38172982-38173039)
[»] chr2 (19 HSPs)
chr2 (1-288)||(16546206-16546510)
chr2 (59-277)||(45655963-45656180)
chr2 (59-186)||(39070211-39070338)
chr2 (59-199)||(37614532-37614674)
chr2 (172-287)||(39070355-39070459)
chr2 (59-140)||(42799173-42799253)
chr2 (465-551)||(30760458-30760544)
chr2 (460-557)||(13534994-13535092)
chr2 (152-291)||(26180406-26180544)
chr2 (464-531)||(30758317-30758384)
chr2 (1-52)||(42799097-42799148)
chr2 (61-127)||(4435287-4435352)
chr2 (4-52)||(45655891-45655939)
chr2 (135-289)||(8230376-8230531)
chr2 (17-52)||(39070152-39070187)
chr2 (142-212)||(42799349-42799420)
chr2 (135-288)||(35524913-35525066)
chr2 (2-51)||(37614699-37614748)
chr2 (1-29)||(39069991-39070019)
[»] chr4 (19 HSPs)
chr4 (4-288)||(22785880-22786180)
chr4 (59-277)||(6016827-6017044)
chr4 (59-277)||(2407018-2407236)
chr4 (151-264)||(48861760-48861873)
chr4 (135-263)||(21790525-21790652)
chr4 (61-140)||(8745700-8745778)
chr4 (61-140)||(48841184-48841262)
chr4 (62-140)||(52628294-52628371)
chr4 (1-52)||(6016752-6016803)
chr4 (4-46)||(2407266-2407308)
chr4 (62-140)||(54165954-54166031)
chr4 (75-140)||(43892522-43892586)
chr4 (162-257)||(48840949-48841043)
chr4 (135-205)||(52628100-52628170)
chr4 (135-288)||(8762829-8762982)
chr4 (135-219)||(16608578-16608662)
chr4 (63-140)||(21790774-21790851)
chr4 (61-135)||(48862014-48862087)
chr4 (142-198)||(54166160-54166216)
[»] chr5 (13 HSPs)
chr5 (59-277)||(40528175-40528392)
chr5 (136-277)||(16908840-16908979)
chr5 (61-140)||(34034105-34034183)
chr5 (61-140)||(41640054-41640132)
chr5 (75-140)||(13517580-13517644)
chr5 (75-140)||(17768976-17769040)
chr5 (61-135)||(17695896-17695969)
chr5 (135-205)||(22098943-22099013)
chr5 (178-264)||(34033839-34033925)
chr5 (135-293)||(3498684-3498842)
chr5 (238-288)||(7008761-7008811)
chr5 (135-197)||(19949035-19949097)
chr5 (59-139)||(16908639-16908717)
[»] scaffold0795 (1 HSPs)
scaffold0795 (419-588)||(5023-5190)
[»] scaffold0361 (1 HSPs)
scaffold0361 (135-275)||(6917-7056)
[»] scaffold0186 (1 HSPs)
scaffold0186 (60-140)||(22726-22805)
[»] scaffold0005 (1 HSPs)
scaffold0005 (61-140)||(292254-292332)
[»] scaffold0481 (1 HSPs)
scaffold0481 (67-140)||(6701-6773)
[»] scaffold0110 (1 HSPs)
scaffold0110 (135-197)||(7097-7159)
[»] scaffold0002 (2 HSPs)
scaffold0002 (59-139)||(428348-428426)
scaffold0002 (135-198)||(428548-428611)


Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-153; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 289 - 631
Target Start/End: Original strand, 31032929 - 31033269
Alignment:
Q  289 cttgtaactgtcacaatcccacacctatgccttaatctctttcaacagaaaaggtctaataagattagctccatcctccatagaaattgttttaaaggat 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31032929 cttgtaactgtcacaatcccacacctatgccttaatctctttcaacacaaaaggtctaataagattagctccattctccatagaaattgttttaaaggat 31033028  T
Q  389 atattccctacatctgatctagacaacattacctctataaaatgtgactgaaaaatgttgaaacattgcgttcctcaccccttccacaccctcgatctga 488  Q
    | || ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  31033029 agatcccctacacctgatctagacaacattacctctataaaatgtgactg-aaaatgttgaaatattgtgttcctcaccccttccacaccctcgatatga 31033127  T
Q  489 acaccattaacattattagagataatcacattcgaccttctccgagaggacatcaccccatggaaaaaatttagaattgacatcaacttcctttaaccaa 588  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  31033128 acaccattaacattattagagataatcgcattcaaccttctctgagaggacatcatcccgtgg-aaaaatttagaattgacatcaacttcctttaaccaa 31033226  T
Q  589 tctattctaagttttttgcgactgaatacctgaatgcaatttg 631  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31033227 tctattctaagttttttgcgactgaatacctgaatgcaatttg 31033269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 30950750 - 30951054
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat-----------------gtttcttaaatagattaatgatgtcttttcc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||  ||||||||||||| ||||||||| |    
T  30950750 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaattttatccataattgaccgtttactaaatagattaataatgtctttttc 30950849  T
Q  84 aatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctccatgttt 183  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||    
T  30950850 aatgtaaaacaaataggttatttgcaagaaactcaatgtccatttaatttgtttatgttaattttcggcaactgaatttgtttggggatgctcaatgttt 30950949  T
Q  184 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggatgcgc 283  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30950950 attatttggggtactcgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggctgcgc 30951049  T
Q  284 ccctg 288  Q
    |||||    
T  30951050 ccctg 30951054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 59 - 296
Target Start/End: Original strand, 29799070 - 29799305
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactga 158  Q
    ||||| ||||||| |||||||| ||||||||||  |||||||||||||| |||||||||||| | ||||||||||||||||| || |||| |||||||||    
T  29799070 taaattgattaataatgtctttcccaatgtaaac-aaataggttatttgtaagaaactcaatatccatttaatttgtttatgctagtttttggcaactga 29799168  T
Q  159 atttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggct 258  Q
    |||| |||||  || ||| |||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||||| ||||||||||||||    
T  29799169 atttatttggagtaactcaatgtttattatttggggtagccgaatataaatttataccaaccaattaaagattaatatatttttt-gggtagccaaggct 29799267  T
Q  259 accccttgtcaatgaagggatgcgcccctgcttgtaac 296  Q
    |||||||| |||||||||| | ||||||||||| ||||    
T  29799268 accccttgccaatgaagggctacgcccctgcttttaac 29799305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 44961548 - 44961470
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  44961548 aatagattaatgatgtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtccatttaatttgtctatg 44961470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 1600569 - 1600650
Alignment:
Q  61 aatagattaatgatg---tcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||||||||||   ||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  1600569 aatagattaatgatgatttcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtccatttaatttgtctatg 1600650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 10406174 - 10406247
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgt 135  Q
    ||||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||| ||| |||||| |||||    
T  10406174 aatagattaataatgttttttcgaatgtaaa-taaataggttatttgcaagaaactcactgtccatttagtttgt 10406247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 11142770 - 11142697
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgt 135  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||| |||||||||||| ||| ||||||||||||    
T  11142770 aatagattaataatgtcttttcaaatgtaaa-tgaataggttattcgcaagaaactcattgtccatttaatttgt 11142697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 15757822 - 15757758
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  15757822 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 15757758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 264
Target Start/End: Complemental strand, 23614495 - 23614402
Alignment:
Q  171 tagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctacccct 264  Q
    |||||| ||||||||||||| ||||||||| |||| ||| || ||| | | ||| |||| |||||  |||||||||||||||||||||||||||    
T  23614495 tagctcaatgtttattatttagggtagccggatataaatatataccgattaattcaagaataatactttttttggggtagccaaggctacccct 23614402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 19313479 - 19313401
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||| | |  ||||||||||| ||||    
T  19313479 aatagattaataatgtcttttcaaatgtaaa-taaataagttatttgcaagaaactcactatctatttaatttgtctatg 19313401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 29357232 - 29357169
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagc 198  Q
    |||||||||||||||||||||| || || |||||| |||||| || ||||||||||||||||||    
T  29357232 tttatgttaattttcggcaactaaacttatttggggtagctcaatatttattatttggggtagc 29357169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 256
Target Start/End: Complemental strand, 47367757 - 47367639
Alignment:
Q  137 tatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatat 236  Q
    |||| ||||||||| ||| || || |||||||| |||||| |||||||||||||| ||||||  ||||| |||  | ||||||| ||| || | ||| ||    
T  47367757 tatgctaattttcgacaattggatatgtttggggtagctcaatgtttattatttgaggtagcaaaatataaatacataccaactaattcaacaataa-at 47367659  T
Q  237 attttttggggtagccaagg 256  Q
    ||||||||||||||||||||    
T  47367658 attttttggggtagccaagg 47367639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 10620209 - 10620145
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||| ||||||||||| ||| |||||||||||| ||||    
T  10620209 gtcttttcaaatgtaaa-taaataggttattttcaagaaactcattgtacatttaatttgtctatg 10620145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 10177995 - 10177922
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgt 135  Q
    ||||||||||| |||| ||||| ||||| || ||||||||||||||||||||||||||  || |||||| |||||    
T  10177995 aatagattaataatgttttttcaaatgtgaa-taaataggttatttgcaagaaactcaccgtccatttagtttgt 10177922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 28403192 - 28403128
Alignment:
Q  53 gtttcttaaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactca 118  Q
    |||| |||||||||| ||| ||||||||| |||||||||  |||||||||||||||| ||||||||    
T  28403192 gtttattaaatagatcaataatgtctttttcaatgtaaac-aaataggttatttgcatgaaactca 28403128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 23614729 - 23614656
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgt 135  Q
    ||||||||||| ||| |||||  |||||||| |||||| ||||||||||||||||||| |||   ||||||||||    
T  23614729 aatagattaataatgactttttaaatgtaaa-taaatatgttatttgcaagaaactcattgtctgtttaatttgt 23614656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 33240877 - 33240946
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcattta 129  Q
    ||||||||||||| |||| |||||||||||||| | ||||||| |||| ||| ||| ||||||| ||||||    
T  33240877 taaatagattaataatgtattttccaatgtaaact-aataggtcattttcaataaattcaatgtccattta 33240946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 19313266 - 19313217
Alignment:
Q  151 gcaactgaatttgtttgggatagctccatgtttattatttggggtagccg 200  Q
    ||||| |||| |||||||| |||||| || ||||||||||||||||||||    
T  19313266 gcaacggaatgtgtttggggtagctcaatatttattatttggggtagccg 19313217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 213; Significance: 1e-116; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 28491471 - 28491167
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat-----------------gtttcttaaatagattaatgatgtcttttcc 83  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||                 ||||  ||||||||||||| |||||||||||    
T  28491471 ttgacaatagctatttaaaaaatttgtgtaaaatgcatttcaagaaaccaattttatccataattgaccgtttactaaatagattaataatgtcttttcc 28491372  T
Q  84 aatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctccatgttt 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28491371 aatgtaaaataaataggttatttgcaagaaactcaatgtccatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctcaatgttt 28491272  T
Q  184 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggatgcgc 283  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28491271 attatttggggtagccgagtatcaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggctgcgc 28491172  T
Q  284 ccctg 288  Q
    |||||    
T  28491171 ccctg 28491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 13465614 - 13465310
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat-----------------gtttcttaaatagattaatgatgtcttttcc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||  ||||||||||||| |||||||||||    
T  13465614 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaattttatccataattgaccgtttactaaatagattaataatgtcttttcc 13465515  T
Q  84 aatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctccatgttt 183  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||| || |||||| |||||     
T  13465514 aatgtaaaacaaataggttatttgcaagaaactcaatgtccatttaatttgtttatgttaaatttcggaaactgaatttgtttagggtagctcaatgtta 13465415  T
Q  184 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggatgcgc 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  13465414 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggttgcac 13465315  T
Q  284 ccctg 288  Q
    |||||    
T  13465314 ccctg 13465310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 59 - 288
Target Start/End: Original strand, 25439580 - 25439806
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactga 158  Q
    ||||||||||||| |||||||||||||||||||| |||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25439580 taaatagattaataatgtcttttccaatgtaaaacaaataggtt---tgcaagaaactcaatgtccatttaatttgtttatgttaattttcggcaactga 25439676  T
Q  159 atttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggct 258  Q
    ||||||| ||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25439677 atttgttcggggtagctcaatatttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggct 25439776  T
Q  259 accccttgtcaatgaagggatgcgcccctg 288  Q
    ||||||||||||||||||| ||||||||||    
T  25439777 accccttgtcaatgaagggctgcgcccctg 25439806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 37202700 - 37202571
Alignment:
Q  136 ttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaata 235  Q
    ||||||||||||||| ||||| |||||||||| ||| |||  || |||||||||||||| ||| | |||| ||| || ||||||  ||| |||| |||||    
T  37202700 ttatgttaattttcgacaactaaatttgtttgagatggcttaatatttattatttggggcagcaggatataaatatataccaaccaattgaagaataata 37202601  T
Q  236 tattttttggggtagccaaggctaccccttg 266  Q
    |||||||| ||||||||||||||||||||||    
T  37202600 tatttttt-gggtagccaaggctaccccttg 37202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 46211663 - 46211741
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  46211663 aatagattaataatgtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 46211741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 758989 - 758911
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||| |||||||||||| ||||    
T  758989 aatagattaataatgtcttttcaaatgtaaa-taaatagattatttgcaagaaactcattgtacatttaatttgtctatg 758911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 29715831 - 29715909
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||||  || |||||||||||| ||||    
T  29715831 aatagattaataatgtcttttcaaatgtaaa-taaataggttatttacaagaaactcaccgtccatttaatttgtctatg 29715909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 48609091 - 48609169
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||| ||||| ||||| || |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  48609091 aatagattaataatgtgttttcaaatgttaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 48609169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 37202903 - 37202823
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||||| |||| |||||  |||||||  |||||| |||||||||||||||| ||||| |||||||||||||||||    
T  37202903 taaatagattaataatgttttttctgatgtaaac-aaatagattatttgcaagaaactgaatgtccatttaatttgtttatg 37202823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 39720025 - 39719961
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  39720025 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 39719961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 83617 - 83673
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactca 118  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||||    
T  83617 aatagattaataatgtcttttcaaatgtaaa-taaataggttatttacaagaaactca 83673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 25592035 - 25591918
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||  |||| |||||||||| ||||||||  |||||| || |||||||||||||||||| | ||||  ||  | ||||||| ||  |||| ||||    
T  25592035 tttatgttgttttttggcaactgaacttgtttggagtagctcaatatttattatttggggtagctggatatagatacataccaactaatacaagaataat 25591936  T
Q  235 atattttttggggtagcc 252  Q
    || |||||||||||||||    
T  25591935 attttttttggggtagcc 25591918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 29716051 - 29716097
Alignment:
Q  158 aatttgtttgggatagctccatgtttattatttggggtagccgaata 204  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||    
T  29716051 aatttgtttggggtagctcaatatttattatttggggtagccgaata 29716097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 34659474 - 34659394
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||||| |||| ||||  |||||||| ||| || ||||||||||| ||||||| | | |||||||||||||||||    
T  34659474 taaatagattaataatgtatttttaaatgtaaactaa-taagttatttgcaataaactcattatccatttaatttgtttatg 34659394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 45855470 - 45855342
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    |||||||||||||||| ||||  || || |||||| |||||| || ||||||||||||||||||  ||||| ||| || ||| ||  ||| |||| || |    
T  45855470 tttatgttaattttcgacaaccaaacttatttggggtagctcaatatttattatttggggtagctaaatataaatatataccgaccaattcaagaatatt 45855371  T
Q  235 atattttttggggtagccaaggctacccc 263  Q
     | | |||||||||||| | |||||||||    
T  45855370 ttttcttttggggtagcaagggctacccc 45855342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 27097104 - 27097050
Alignment:
Q  144 attttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagc 198  Q
    ||||||| ||||  |||||||||||| |||||| || ||||||||||||||||||    
T  27097104 attttcgacaaccaaatttgtttggggtagctcaatatttattatttggggtagc 27097050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 27181199 - 27181253
Alignment:
Q  144 attttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagc 198  Q
    ||||||| ||||  |||||||||||| |||||| || ||||||||||||||||||    
T  27181199 attttcgacaaccaaatttgtttggggtagctcaatatttattatttggggtagc 27181253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 289
Target Start/End: Original strand, 40253844 - 40253998
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||||||||   ||| | ||||| |||||| |||||  || ||| ||||||||| ||||  ||||| ||   | |||||| |||| ||||  |||    
T  40253844 tttatgttaatttttaacaaataaatttatttggggtagctaaatattttttatttgggatagctaaatataaaaacataccaacatattcaagaacaat 40253943  T
Q  235 atattttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccctgc 289  Q
    || |||||||||||||||| ||||||| | ||  ||||||||||  |||||||||    
T  40253944 attttttttggggtagccatggctacctcatgctaatgaagggaaccgcccctgc 40253998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 25439537 - 25439566
Alignment:
Q  4 acaatagctatttaaaaaagttgtgtaaaa 33  Q
    ||||||||||||||||||||||||||||||    
T  25439537 acaatagctatttaaaaaagttgtgtaaaa 25439566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 40763969 - 40763664
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat-----------------gtttcttaaatagattaatgatgtcttttcc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||  ||||||||||||| |||| ||||||    
T  40763969 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaattttatccataattgaccgtttactaaatagattaataatgttttttcc 40763870  T
Q  84 aatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctccatgttt 183  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  40763869 aatgtaaaacaaataggttatttgcaagaaactcaatgtccatttaatttgtttatgttaattttcgacaactgaatttgtttgggatagctcaatgttt 40763770  T
Q  184 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggatgcgc 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  40763769 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtaaccaaggctacctcttgtcaatgaagggttgcgc 40763670  T
Q  284 ccctgc 289  Q
    ||||||    
T  40763669 ccctgc 40763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 59 - 288
Target Start/End: Original strand, 20843204 - 20843432
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactga 158  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||||| ||||||| ||||||||| ||  ||||| |||||||    
T  20843204 taaatagattaataatgtcttttccaatgtaaac-aaataggttatttgcaagaaattcaatgtccatttaaattgtttatgctagctttcgacaactga 20843302  T
Q  159 atttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggct 258  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| || |||||| ||||||  |||||| ||||||||||||||||||||||||||||||    
T  20843303 atttgtttggggtagctcaatgtttattatttggggtagccgaaaataaatttataccaaccaattaaatattaatatattttttggggtagccaaggct 20843402  T
Q  259 accccttgtcaatgaagggatgcgcccctg 288  Q
    |||||||| |||| ||||| | ||||||||    
T  20843403 accccttgccaataaagggctacgcccctg 20843432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 66 - 289
Target Start/End: Original strand, 3458100 - 3458324
Alignment:
Q  66 attaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtt 165  Q
    |||||| ||||||| |||| ||||||  ||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||  |    
T  3458100 attaataatgtcttctccagtgtaaac-aaataagttatttgcaagaaactcaatatccatttaatttgtttatgctaattttcggcaactgaatttact 3458198  T
Q  166 tggg--atagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctacccc 263  Q
    ||||  ||| ||| || |||||||| |||||||||||||||| |||||| |||||   |||||||||||||||||||||| |||||||||||||||||      
T  3458199 tggggtatatctcaatatttattatatggggtagccgaatataaatttagaccaaacaattaaagattaatatatttttttgggtagccaaggctacctg 3458298  T
Q  264 ttgtcaatgaagggatgcgcccctgc 289  Q
    ||| |||||||||| | |||||||||    
T  3458299 ttgccaatgaagggctacgcccctgc 3458324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 16152176 - 16152063
Alignment:
Q  151 gcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtag 250  Q
    |||||| || || |||||| |||||| ||||||||||||||||||||||| |||| ||| || ||| | | ||| |||| |||||  |||||||||||||    
T  16152176 gcaactaaacttatttggggtagctcaatgtttattatttggggtagccggatataaatatataccgattaattcaagaataatactttttttggggtag 16152077  T
Q  251 ccaaggctacccct 264  Q
    ||||||||||||||    
T  16152076 ccaaggctacccct 16152063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 17652973 - 17653051
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| ||||| || |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  17652973 aatagattaataatgtcttttcaaatgttaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 17653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 21296078 - 21296014
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  21296078 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 21296014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 46823950 - 46823886
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  46823950 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 46823886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 20843132 - 20843180
Alignment:
Q  4 acaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat 52  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  20843132 acaatagctatttaaaaaagttgggtaaaatgcatttcaagaagccaat 20843180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 19795540 - 19795412
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    |||||||||||||||| ||||  || ||||||||| |||||| || |||||||||||| |||||  ||||| ||| || ||||||  ||| |||| || |    
T  19795540 tttatgttaattttcgacaaccaaacttgtttggggtagctcaatatttattatttggagtagctaaatataaatatataccaaccaattcaagaatatt 19795441  T
Q  235 atattttttggggtagccaaggctacccc 263  Q
     | | |||||||||||| | |||||||||    
T  19795440 ttttattttggggtagcaagggctacccc 19795412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 16152390 - 16152317
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgt 135  Q
    ||||||||||| ||| |||||  |||||||| |||||| ||||||||||||||||||| |||   ||||||||||    
T  16152390 aatagattaataatgactttttaaatgtaaa-taaatatgttatttgcaagaaactcattgtctgtttaatttgt 16152317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 29123482 - 29123428
Alignment:
Q  144 attttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagc 198  Q
    ||||||| ||||  ||||| ||||||||||||| || ||||||||||||||||||    
T  29123482 attttcgacaacgaaatttatttgggatagctcaatatttattatttggggtagc 29123428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-107; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 1780584 - 1780889
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat-----------------gtttcttaaatagattaatgatgtcttttcc 83  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||                 ||||  ||||||||||||| |||||||||||    
T  1780584 ttgacgatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaattttatccataattgaccgtttactaaatagattaataatgtcttttcc 1780683  T
Q  84 aatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctccatgttt 183  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||    
T  1780684 aatgtaaaacaaattggttatttgcaagaaactcaatgtccatttaatttgtttatgttaattttcgacaactgaatttgtttggggtagctcaatgttt 1780783  T
Q  184 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggatgcgc 283  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1780784 attatatggggtagccgaatattaatttacaccaactcattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggctgcgc 1780883  T
Q  284 ccctgc 289  Q
    ||||||    
T  1780884 ccctgc 1780889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 29363531 - 29363609
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  29363531 aatagattaataatgtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 29363609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 29486332 - 29486224
Alignment:
Q  158 aatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggc 257  Q
    ||||| ||||| ||||||| |||||||||||||| |||||||  |||| | |||| |||||   ||| |||| || ||||||||||||||||||||||||    
T  29486332 aatttatttggaatagctcgatgtttattatttgaggtagccagatataattttataccaaacaattgaagaatagtatattttttggggtagccaaggc 29486233  T
Q  258 taccccttg 266  Q
    |||||||||    
T  29486232 taccccttg 29486224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 24428903 - 24428827
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtt 136  Q
    ||||||||||||| ||||||||| |||||| ||  ||||||||||||| ||||||||||||||| |||||||||||||    
T  24428903 taaatagattaataatgtctttttcaatgttaac-aaataggttattttcaagaaactcaatgtccatttaatttgtt 24428827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 34729935 - 34729857
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||  ||||| || |||||||||||||||||||||||||| ||| ||||||| |||| ||||    
T  34729935 aatagattaataatgtctttttaaatgttaa-taaataggttatttgcaagaaactcattgtacatttaacttgtctatg 34729857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 263
Target Start/End: Original strand, 904223 - 904352
Alignment:
Q  135 tttatgttaattttcggcaactgaa-tttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaa 233  Q
    |||||| |||||||||||||   || ||| |||||| |||||| || ||||||||||||||||||  ||| | | |||| | ||||  ||| |||| |||    
T  904223 tttatgctaattttcggcaaaccaagtttatttggggtagctcaatatttattatttggggtagctaaatgtaattttatatcaaccaattcaagaataa 904322  T
Q  234 tatattttttggggtagccaaggctacccc 263  Q
    | |||||||||||||||| |||||||||||    
T  904323 tttattttttggggtagcaaaggctacccc 904352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 33224650 - 33224522
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    |||||||||||||||| ||||  || |||||| || |||||| || ||||||||||||||||||  ||||| ||| || ||||||  ||| |||| || |    
T  33224650 tttatgttaattttcgacaaccaaacttgtttagggtagctcaatatttattatttggggtagctaaatataaatatataccaaccaatttaagaatatt 33224551  T
Q  235 atattttttggggtagccaaggctacccc 263  Q
     | | |||||||||||| | |||||||||    
T  33224550 ttttattttggggtagcaagggctacccc 33224522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 265
Target Start/End: Original strand, 22956637 - 22956766
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||| |||| ||||||| || ||||||||| |||||| || |||||||||||||||||| | ||||  ||  | ||||||| ||  |||| ||||    
T  22956637 tttatgttattttt-ggcaactaaacttgtttggggtagctcaatttttattatttggggtagctggatatagatacataccaactaatacaagaataat 22956735  T
Q  235 atattttttggggtagccaaggctacccctt 265  Q
       |||||| ||||||||||| |||||||||    
T  22956736 tattttttttgggtagccaagactacccctt 22956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 265
Target Start/End: Complemental strand, 23831755 - 23831626
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||| |||| ||||||| || ||||||||| |||||| || |||||||||||||||||| | ||||  ||  | ||||||| ||  |||| ||||    
T  23831755 tttatgttattttt-ggcaactaaacttgtttggggtagctcaatttttattatttggggtagctggatatagatacataccaactaatacaagaataat 23831657  T
Q  235 atattttttggggtagccaaggctacccctt 265  Q
       |||||| ||||||||||| |||||||||    
T  23831656 tattttttttgggtagccaagactacccctt 23831626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 24428692 - 24428622
Alignment:
Q  142 taattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaattta 212  Q
    ||||||||||||||||||||||||| || ||  || ||||||||||||| ||||| ||| |||| ||||||    
T  24428692 taattttcggcaactgaatttgtttagggtaattcaatgtttattatttagggtaaccggatataaattta 24428622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 8560093 - 8560153
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggt 195  Q
    |||||||||||||||||||||  || || |||||| |||||| || |||||||||||||||    
T  8560093 tttatgttaattttcggcaaccaaacttatttggggtagctcaatatttattatttggggt 8560153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 27673880 - 27673842
Alignment:
Q  226 aagattaatatattttttggggtagccaaggctacccct 264  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  27673880 aagaataatattttttttggggtagccaaggctacccct 27673842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 29486554 - 29486475
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| | || | |||| |||||||| | ||||||||||||||||||||||| | ||| || ||||||||||||||    
T  29486554 taaatagattattaatatatttttcaatgtaaga-aaataggttatttgcaagaaact-attgtccaattaatttgtttatg 29486475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 12491722 - 12491418
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat-----------------gtttcttaaatagattaatgatgtcttttcc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||  ||||||||||||| |||| ||||||    
T  12491722 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaattgtatccataattgaccgtttactaaatagattaataatgttttttcc 12491623  T
Q  84 aatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctccatgttt 183  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  12491622 aatgtaaaacaaataggttatttgcaagaaactcaatgtccatttaatttgtttatgttaattttcggcaactgaatttgtttggggcagctcaatgttt 12491523  T
Q  184 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggatgcgc 283  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12491522 gttatttggggtagccgaatattaatttgcaccaacttattaaagattaatatattttttggagtagccaaggctaccccttgtcaatgaagggttgcgc 12491423  T
Q  284 ccctg 288  Q
    |||||    
T  12491422 ccctg 12491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 135 - 288
Target Start/End: Original strand, 6115131 - 6115284
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||| |||| |||||||||| ||||||||| ||| || |||||||||||||  |||||| | ||||  ||  | ||||||| ||  |||| ||||    
T  6115131 tttatgttattttttggcaactgaacttgtttggggtagttcaatgtttattatttatggtagctggatatagatacataccaactaatacaagaataat 6115230  T
Q  235 atattttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccctg 288  Q
    || ||||||||||||||||||||||||||||   |||||| |||| ||||||||    
T  6115231 attttttttggggtagccaaggctaccccttcctaatgaaaggatacgcccctg 6115284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 38172793 - 38172870
Alignment:
Q  62 atagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||||| |||| || ||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  38172793 atagattaataatgtattctccaatgtaaactaa-taggttatttgcaataaactcattgttcatttaatttgtttatg 38172870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 38699750 - 38699823
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgt 135  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| | | ||||||||||||    
T  38699750 aatagattaataatgtcttttcaaatgtaaa-taaataggttatttgcaagaaactcactctccatttaatttgt 38699823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 41570311 - 41570189
Alignment:
Q  143 aattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttt 242  Q
    ||||||||||||||||| || |||||| |||||| || |||||||||||||||||| |||||| |||  | ||| ||  | | ||||  |||||  ||||    
T  41570311 aattttcggcaactgaacttttttggggtagctcaatatttattatttggggtagctgaatataaatacatacctaccaactcaagaaaaatattgtttt 41570212  T
Q  243 tggggtagccaaggctacccctt 265  Q
    |||||||||||||||||||||||    
T  41570211 tggggtagccaaggctacccctt 41570189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 13541419 - 13541491
Alignment:
Q  60 aaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaattt 133  Q
    |||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  13541419 aaatagattaataatatcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtccatttaattt 13541491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 13683054 - 13682982
Alignment:
Q  60 aaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaattt 133  Q
    |||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  13683054 aaatagattaataatatcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtccatttaattt 13682982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 135 - 288
Target Start/End: Complemental strand, 32415797 - 32415644
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||| |||||||| | ||||| ||||| |||||| || ||| |||||||||||||  ||| |||  |||| | |||| ||||||  ||| |||| ||||    
T  32415797 tttatattaatttttgacaacttaatttatttggggtaactcaatgtttattatttaaggttgccagatataagtttataccaaccaattgaagaataat 32415698  T
Q  235 atattttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccctg 288  Q
    ||||||||| |||||||||| | |||||||||||  ||||||| | ||||||||    
T  32415697 atatttttttgggtagccaaagttaccccttgtcgttgaagggctacgcccctg 32415644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 18881937 - 18881858
Alignment:
Q  60 aaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  |||||||| ||||||||    
T  18881937 aaatagattaataatgttttttccaatgtaaac-aaataggttatttgcaagaaactcattgcccatttaatatgtttatg 18881858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 4072227 - 4072291
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  4072227 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 4072291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 21441593 - 21441657
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  21441593 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 21441657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 41323181 - 41323245
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| ||||||| |||||||||||||||||| ||| |||||||||||| ||||    
T  41323181 gtcttttcaaatgtaaa-taaatagtttatttgcaagaaactcattgtacatttaatttgtctatg 41323245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 1233756 - 1233840
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaac 219  Q
    |||||||||||||||||||||  || ||| ||||| |||||| || ||||||||||||||||||  ||||| ||| || ||||||    
T  1233756 tttatgttaattttcggcaaccaaacttgcttggggtagctcaatatttattatttggggtagctaaatataaatatataccaac 1233840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 43115301 - 43115234
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcattta 129  Q
    ||||||||||| |||| ||||| |||||||| |||||| ||||||||||||||||||| ||| ||||||    
T  43115301 aatagattaataatgttttttcaaatgtaaa-taaatatgttatttgcaagaaactcactgtccattta 43115234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 33613749 - 33613707
Alignment:
Q  90 aaataaataggttatttgcaagaaactcaatgttcatttaatt 132  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  33613749 aaataaataggttatttgcaagaaactcattgtccatttaatt 33613707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 13641112 - 13641196
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaac 219  Q
    |||||||||||||||||||||  || ||| ||||| |||||| || ||||||||||| ||||||  ||||| ||| || ||||||    
T  13641112 tttatgttaattttcggcaaccaaacttgcttggggtagctcaatatttattatttgaggtagctaaatataaatatataccaac 13641196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 13741524 - 13741608
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaac 219  Q
    |||||||||||||||||||||  || ||| ||||| |||||| || ||||||||||| ||||||  ||||| ||| || ||||||    
T  13741524 tttatgttaattttcggcaaccaaacttgcttggggtagctcaatatttattatttgaggtagctaaatataaatatataccaac 13741608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 41570487 - 41570441
Alignment:
Q  94 aaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||||||||||||||||| |  ||||||||| ||||||||    
T  41570487 aaataggttatttgcaagaaactcattactcatttaatatgtttatg 41570441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 38172982 - 38173039
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttgg 192  Q
    ||||| |||||||||  ||| |||| ||||||||| |||||| |||||||||||||||    
T  38172982 tttatcttaattttcaacaattgaacttgtttggggtagctcaatgtttattatttgg 38173039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-104; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 16546510 - 16546206
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat-----------------gtttcttaaatagattaatgatgtcttttcc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||  ||||||||||||| |||||||||||    
T  16546510 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaattttatccataattgaccgtttactaaatagattaataatgtcttttcc 16546411  T
Q  84 aatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctccatgttt 183  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  16546410 aatgtaaaacaaataggttatttggaagaaactcaatgtccatttaatttgtttatgttaattttcggcaactgaatttgtttagggtagctcaatgttt 16546311  T
Q  184 attatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggatgcgc 283  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | |||||    
T  16546310 attatttggggtagccgaatataaatttacaccaacttattaaagtttaatatattttttggggtagccaaggctaacccttgtcaatgaagagttgcgc 16546211  T
Q  284 ccctg 288  Q
    |||||    
T  16546210 ccctg 16546206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 59 - 277
Target Start/End: Original strand, 45655963 - 45656180
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactga 158  Q
    ||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||||| | ||||||||| ||  ||||| |||||||    
T  45655963 taaatagattaataatgtctttttcaatgtaaac-aaataggttatttgcaagaaattcaatgtccatttcaattgtttatgctagctttcgacaactga 45656061  T
Q  159 atttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggct 258  Q
    ||||||||||| |||||| || |||||||||||||||||||||| || |||||| ||||||  |||||| ||||||||||||||||||||||||||||||    
T  45656062 atttgtttggggtagctcaatatttattatttggggtagccgaaaataaatttataccaaccaattaaaaattaatatattttttggggtagccaaggct 45656161  T
Q  259 accccttgtcaatgaaggg 277  Q
    |||||||| ||||||||||    
T  45656162 accccttgccaatgaaggg 45656180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 39070211 - 39070338
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactga 158  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  39070211 taaatagattaataatgtcttttccaatgtaaaacaaataggttatttgcaagaaactcaatgtccatttaatttatttatgttaattttcggcaactga 39070310  T
Q  159 atttgtttgggatagctccatgtttatt 186  Q
    |||||||| || || ||| |||||||||    
T  39070311 atttgtttagggtatctcaatgtttatt 39070338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 37614674 - 37614532
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgta--aaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaact 156  Q
    ||||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||| |||||||  |||||||||||||||| ||||||||| | | |    
T  37614674 taaatagattaataatgtcttttccaatgtagtaaacaaataggttatttgcaagaaattcaatgtctatttaatttgtttatgctaattttcgacgatt 37614575  T
Q  157 gaatttgtttgggatagctccatgtttattatttggggtagcc 199  Q
     |||||| ||||| | |||| ||||||||||||||||||||||    
T  37614574 aaatttgcttggggtggctcaatgtttattatttggggtagcc 37614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 39070355 - 39070459
Alignment:
Q  172 agctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaat 271  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||           |||||||||||||||    
T  39070355 agctcaatgtttattatttgaggtagccgaatataaatttacaccaacttattaaagattaatatattttttgg-----------ctaccccttgtcaat 39070443  T
Q  272 gaagggatgcgcccct 287  Q
    |||||| |||||||||    
T  39070444 gaagggctgcgcccct 39070459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 42799173 - 42799253
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||||    
T  42799173 taaatagattaataatgtcttttccaatgtaaac-aaatagtttatttgcaagaaactcaatgtccatttaatttgtttatg 42799253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 30760458 - 30760544
Alignment:
Q  465 accccttccacaccctcgatctgaacaccattaacattattagagataatcacattcgaccttctccgagaggacatcaccccatgg 551  Q
    ||||||||||||||||| | |||||||||||| |||||| |||| ||||| ||||| |||||||||||| | |||||||| ||||||    
T  30760458 accccttccacaccctctacctgaacaccatttacattaatagaaataatgacatttgaccttctccgaaaagacatcactccatgg 30760544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 460 - 557
Target Start/End: Original strand, 13534994 - 13535092
Alignment:
Q  460 tcctcaccccttccacaccctcgatctgaacaccattaacattattagagataatcacattcga-ccttctccgagaggacatcaccccatggaaaaaa 557  Q
    ||||| |||||||||||||||  ||||||||||| ||||||||| |||| ||||||||| | || || ||||| ||| |||| ||||||||||||||||    
T  13534994 tcctcgccccttccacacccttaatctgaacacctttaacattaatagaaataatcacagttgacccgtctcctagaagacaccaccccatggaaaaaa 13535092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 291
Target Start/End: Complemental strand, 26180544 - 26180406
Alignment:
Q  152 caactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagc 251  Q
    ||||| || ||||||| | |||||| || |||||||||||  |||||   |||| |||  | ||||||| ||| || |||||||||||||||||| ||||    
T  26180544 caactaaacttgtttgaggtagctcaatatttattatttgaagtagctagatataaatacataccaactaattcaaaattaatatattttttggg-tagc 26180446  T
Q  252 caaggctaccccttgtcaatgaagggatgcgcccctgctt 291  Q
    ||||||||| ||||||  |||||||| | |||||||||||    
T  26180445 caaggctactccttgtatatgaagggctacgcccctgctt 26180406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 30758317 - 30758384
Alignment:
Q  464 caccccttccacaccctcgatctgaacaccattaacattattagagataatcacattcgaccttctcc 531  Q
    |||||||||||||||||| | |||||||||||| |||||| |||| ||||| ||||| ||||||||||    
T  30758317 caccccttccacaccctctacctgaacaccatttacattaatagaaataatgacatttgaccttctcc 30758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42799097 - 42799148
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat 52  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  42799097 ttgacaatagctatttaaaaaagttggataaaatgcatttcaagaagccaat 42799148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 4435352 - 4435287
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatt 127  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||| ||||||||||| ||| ||||    
T  4435352 aatagattaataatgtcttttcaaatgtaaa-taaataggttatttacaagaaactcattgtccatt 4435287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 45655891 - 45655939
Alignment:
Q  4 acaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat 52  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||||    
T  45655891 acaatagctatttaaaaaagttgggtaaaatgcatttcaaaaagccaat 45655939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 289
Target Start/End: Original strand, 8230376 - 8230531
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||||||||   ||| | |||||||||||| |||||  || ||| ||||||||||||||  ||||| ||   | |||||| |||| |||| ||||    
T  8230376 tttatgttaatttttaacaaataaatttgtttggggtagctaaatattttttatttggggtagctaaatataaaaacataccaacatattcaagaataat 8230475  T
Q  235 a-tattttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccctgc 289  Q
    | | |||||||||||||||| ||||||| | ||  ||||||||||  |||||||||    
T  8230476 acttttttttggggtagccatggctacctcatgctaatgaagggaaccgcccctgc 8230531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 39070152 - 39070187
Alignment:
Q  17 aaaaaagttgtgtaaaatgcatttcaagaaaccaat 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  39070152 aaaaaagttgtgtaaaatgcatttcaagaaaccaat 39070187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 42799349 - 42799420
Alignment:
Q  142 taattttcggcaactgaatttgtttgggatagctccatgtttattattt-ggggtagccgaatattaattta 212  Q
    |||| ||||| ||||||||||||||||  |||||  ||||||||||||| |||||||| |||||| ||||||    
T  42799349 taatattcggaaactgaatttgtttggtgtagctgaatgtttattatttgggggtagctgaatataaattta 42799420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 288
Target Start/End: Original strand, 35524913 - 35525066
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||||||||   ||| | ||||| |||||| |||||  || ||| ||||||||||||||  ||||| ||   | |||||| |||| ||||  |||    
T  35524913 tttatgttaatttttaacaaataaatttatttggggtagctaaatattttttatttggggtagctaaatataaaaacataccaacatattcaagaaaaat 35525012  T
Q  235 atattttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccctg 288  Q
    |  |||||||||||||||| ||||||| | ||  ||||||||||  ||||||||    
T  35525013 aatttttttggggtagccatggctacctcatgctaatgaagggaaccgcccctg 35525066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 37614748 - 37614699
Alignment:
Q  2 tgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaa 51  Q
    |||||||||  ||| |||||||||| ||||||||||||||||||| ||||    
T  37614748 tgacaatagaaattaaaaaaagttgggtaaaatgcatttcaagaagccaa 37614699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 39069991 - 39070019
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgt 29  Q
    |||||||||||||||||||||||||||||    
T  39069991 ttgacaatagctatttaaaaaagttgtgt 39070019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 1e-76; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 22786180 - 22785880
Alignment:
Q  4 acaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat-----------------gtttcttaaatagattaatgatgtcttttccaat 86  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||                 ||||  ||||||||||||| ||||||||||||||    
T  22786180 acaatagctatttaaaaaagttgggtaaaatgcatttcaagaagccaattttatccataatcgaccgtttactaaatagattaataatgtcttttccaat 22786081  T
Q  87 gtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactgaatttgtttgggatagctccatgtttatt 186  Q
    || ||| ||||||||||||||||||||| ||||||| ||||||| ||||||||| ||  ||||| |||||||||||||||||| |||||| |||||||||    
T  22786080 gt-aaacaaataggttatttgcaagaaattcaatgtccatttaaattgtttatgctagctttcgacaactgaatttgtttggggtagctcaatgtttatt 22785982  T
Q  187 atttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccc 286  Q
    |||||||||||||||| || |||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  22785981 atttggggtagccgaaaataaatttataccaaccaattaaagattaatatattttttggggtagccaaggctaccccttgccaatgaagggctacgcccc 22785882  T
Q  287 tg 288  Q
    ||    
T  22785881 tg 22785880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 59 - 277
Target Start/End: Original strand, 6016827 - 6017044
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactga 158  Q
    ||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||| ||  ||||| |||||||    
T  6016827 taaatagattaataatgtctttttcaatgtaaac-aaataggttatttgcaagaaactcaatgtacatttaaattgtttatgctagctttcgacaactga 6016925  T
Q  159 atttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggct 258  Q
    ||||||||||| |||||| |||||||||||||||||||||| || || |||||| ||||||  |||||||||||||||| ||||||||||||||||||||    
T  6016926 atttgtttggggtagctcaatgtttattatttggggtagccaaaaataaatttataccaaccaattaaagattaatataatttttggggtagccaaggct 6017025  T
Q  259 accccttgtcaatgaaggg 277  Q
    |||||||| ||||||||||    
T  6017026 accccttgccaatgaaggg 6017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 59 - 277
Target Start/End: Complemental strand, 2407236 - 2407018
Alignment:
Q  59 taaatagattaatgatgtctttt-ccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactg 157  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||| ||||||| ||||||| ||||||||| ||  ||||| ||||||    
T  2407236 taaatagattaataatgtctttttccaatgtaaac-aaataggttatttgcaagaaattcaatgtccatttaaattgtttatgctagctttcgacaactg 2407138  T
Q  158 aatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggc 257  Q
    |||||  ||||| |||||| ||||||||||||||||||||| ||| || |||||| ||||||  ||||||||||||||||||||||| ||||||||||||    
T  2407137 aatttagttggggtagctcaatgtttattatttggggtagctgaaaataaatttataccaaccaattaaagattaatatattttttgaggtagccaaggc 2407038  T
Q  258 taccccttgtcaatgaaggg 277  Q
    ||||||||| ||||||||||    
T  2407037 taccccttgccaatgaaggg 2407018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 48861873 - 48861760
Alignment:
Q  151 gcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtag 250  Q
    |||||| || || |||||| |||||  |||||||||||||||||||||||||||| ||| || ||| | | ||| |||| |||||  |||||||||||||    
T  48861873 gcaactaaacttatttggggtagcttaatgtttattatttggggtagccgaatataaatatataccgattaattcaagaataatactttttttggggtag 48861774  T
Q  251 ccaaggctacccct 264  Q
    ||||||||||||||    
T  48861773 ccaaggctacccct 48861760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 21790652 - 21790525
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    |||||||||||||||||||||||||||| |||  | | |||| || |||||||||| ||||||  |||||| |||||| | |||||  || |||| ||||    
T  21790652 tttatgttaattttcggcaactgaatttatttatggtggctcaatatttattatttagggtagttgaatataaatttataacaactatttgaagaataat 21790553  T
Q  235 atattttttggggtagccaaggctacccc 263  Q
    |||||||||||| || || ||||||||||    
T  21790552 atattttttgggataacc-aggctacccc 21790525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 8745700 - 8745778
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||| | |||||||||| ||| |||||||||||| ||||    
T  8745700 aatagattaataatgtcttttcaaatgtaaa-taaataggttattcgtaagaaactcattgtccatttaatttgtctatg 8745778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 48841262 - 48841184
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| || | | |||||||||||| ||||    
T  48841262 aatagattaataatgtcttttcaaatgtaaa-taaataggttatttgcaagaaacccattatccatttaatttgtctatg 48841184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 52628371 - 52628294
Alignment:
Q  62 atagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||||| || | |||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||| ||||||    
T  52628371 atagattaataatatattttccaatgtaaactaa-taggttatttgcaataaactcattgttcatttaatttatttatg 52628294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6016752 - 6016803
Alignment:
Q  1 ttgacaatagctatttaaaaaagttgtgtaaaatgcatttcaagaaaccaat 52  Q
    |||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  6016752 ttgacaatagctatttaaaaaagttgggtaaaatgcatttcaataagccaat 6016803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 2407308 - 2407266
Alignment:
Q  4 acaatagctatttaaaaaagttgtgtaaaatgcatttcaagaa 46  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  2407308 acaatagctatttaaaaaagttgagtaaaatgcatttcaagaa 2407266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 54165954 - 54166031
Alignment:
Q  62 atagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||||| |||| |||| ||||||||| ||| |||||||||||||| ||||||| ||| |||||||||| ||||||    
T  54165954 atagattaataatgtatttttcaatgtaaactaa-taggttatttgcaataaactcattgtccatttaatttatttatg 54166031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 43892522 - 43892586
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||    
T  43892522 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgcacatttaatttgtctatg 43892586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 48841043 - 48840949
Alignment:
Q  162 tgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggc 257  Q
    |||||||| |||||| ||||||||||||| ||||||||| |||| |||  | ||| ||  |||||||| |||| | ||||||||||||||||||||    
T  48841043 tgtttggggtagctcaatgtttattatttagggtagccggatataaatacataccgacgaattaaagaataat-ttttttttggggtagccaaggc 48840949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 52628170 - 52628100
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatat 205  Q
    ||||| |||||||||  ||| |||| ||||||||| |||||| |||||||||||||| |||||||| ||||    
T  52628170 tttatcttaattttcaacaattgaacttgtttggggtagctcaatgtttattatttgaggtagccggatat 52628100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 288
Target Start/End: Original strand, 8762829 - 8762982
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||||||||   ||| | ||||| |||||| |||||  || ||| ||||||||||||||  ||||| ||  || |||||| |||| ||||  |||    
T  8762829 tttatgttaatttttaacaaataaatttatttggggtagctaaatattttttatttggggtagctaaatataaaaatataccaacatattcaagaacaat 8762928  T
Q  235 atattttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccctg 288  Q
    |  |||||||||||||||| ||||||| | ||  ||||||||||  ||||||||    
T  8762929 actttttttggggtagccatggctacctcatgctaatgaagggaaccgcccctg 8762982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 16608578 - 16608662
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaac 219  Q
    ||||||||||||||||| |||  || || |||||| |||||| || ||||||||||||||||||  ||||| ||| || ||||||    
T  16608578 tttatgttaattttcggtaaccaaacttttttggggtagctcaatatttattatttggggtagctaaatataaatatataccaac 16608662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 21790851 - 21790774
Alignment:
Q  63 tagattaatgatgtcttttccaatgtaaaataaataggttatttgc--aagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||  || ||||||| ||| ||||| |||||||||||    
T  21790851 tagattaataatgtcttttccaa-gtaaa-taaataggttatttgcaaaaaaaactcattgtccattttatttgtttatg 21790774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 48862087 - 48862014
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgt 135  Q
    ||||||||||| ||| |||||  |||||||| |||||| ||||||||||||||||||| |||   ||||||||||    
T  48862087 aatagattaataatgactttttaaatgtaaa-taaatatgttatttgcaagaaactcattgtctgtttaatttgt 48862014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 54166160 - 54166216
Alignment:
Q  142 taattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagc 198  Q
    ||||||| | |||||||| ||||||| | |||||| |||||||||||||||| ||||    
T  54166160 taattttagacaactgaacttgtttgaggtagctcaatgtttattatttgggatagc 54166216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 1e-55; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 59 - 277
Target Start/End: Original strand, 40528175 - 40528392
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatgttaattttcggcaactga 158  Q
    ||||| ||||||| ||||||||| |||||||||  |||||||||||||| |||||||||||| | || |||||||||||||| || ||||||||||||||    
T  40528175 taaattgattaataatgtctttttcaatgtaaac-aaataggttatttgtaagaaactcaatatccacttaatttgtttatgctagttttcggcaactga 40528273  T
Q  159 atttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggct 258  Q
    ||||| ||||| |||||| ||||||||||||| || ||| ||||||| |||||| ||||||  ||||||||||||||||||||||  |||||||||| ||    
T  40528274 atttgcttggggtagctcaatgtttattatttaggatagtcgaatataaatttataccaaccaattaaagattaatatattttttaaggtagccaagact 40528373  T
Q  259 accccttgtcaatgaaggg 277  Q
    | |||||| ||||||||||    
T  40528374 atcccttgccaatgaaggg 40528392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 136 - 277
Target Start/End: Original strand, 16908840 - 16908979
Alignment:
Q  136 ttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaata 235  Q
    |||||||||| |||  |||||||||||||||||| |||||| || ||||||||||| |||||||| |||| ||| || ||||||  | | |||| |||||    
T  16908840 ttatgttaatattcaacaactgaatttgtttggg-tagctcaatatttattatttgaggtagccggatataaatatataccaaccaaatgaagaataata 16908938  T
Q  236 tattttttggggtagccaaggctaccccttgtcaatgaaggg 277  Q
    | ||||||||||||||||||||| ||||||||| ||||||||    
T  16908939 t-ttttttggggtagccaaggctgccccttgtccatgaaggg 16908979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 34034183 - 34034105
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||| ||| |||||||||||| ||||    
T  34034183 aatagattaataatgtcttttcaaatgtaaa-taaataagttatttgcaagaaactcattgtccatttaatttgtctatg 34034105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 41640054 - 41640132
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||| ||| |||||||||||| ||||    
T  41640054 aatagattaataatgtcttttcaaatgtaaa-taaatatgttatttgcaagaaactcattgtacatttaatttgtctatg 41640132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 13517644 - 13517580
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  13517644 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 13517580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 17768976 - 17769040
Alignment:
Q  75 gtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  17768976 gtcttttcaaatgtaaa-taaataggttatttgcaagaaactcattgtacatttaatttgtctatg 17769040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 17695896 - 17695969
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgt 135  Q
    ||||||||||| |||| ||||| |||||||| |||||| ||||||||||||||||||| ||| |||||| |||||    
T  17695896 aatagattaataatgttttttcaaatgtaaa-taaataagttatttgcaagaaactcactgtccatttagtttgt 17695969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 22099013 - 22098943
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatat 205  Q
    ||||| |||||||||| ||||| || ||||||||| |||||| || ||| |||||||||||||||||||||    
T  22099013 tttatcttaattttcgacaactaaacttgtttggggtagctcaatattttttatttggggtagccgaatat 22098943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 34033925 - 34033839
Alignment:
Q  178 atgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaatatattttttggggtagccaaggctacccct 264  Q
    |||||||||| |||||||||||  |||| |||  | ||| ||| ||| |||| |||||| |||||||||||||||||||||||||||    
T  34033925 atgtttattaattggggtagccagatatcaatacataccgactaattcaagaataatattttttttggggtagccaaggctacccct 34033839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 293
Target Start/End: Original strand, 3498684 - 3498842
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    ||||||||||||||   ||| | ||||| |||||| |||||  || ||| ||||||||||||||  ||||| ||   | |||||| |||| |||| ||||    
T  3498684 tttatgttaatttttaacaaataaatttatttggggtagctaaatattttttatttggggtagctaaatataaaaacataccaacatattcaagaataat 3498783  T
Q  235 atattttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccctgcttgt 293  Q
    |  |||||||||||||||| ||||||| | ||  ||||||||||  |||||||| ||||    
T  3498784 actttttttggggtagccatggctacctcatgctaatgaagggaaccgcccctggttgt 3498842  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 7008811 - 7008761
Alignment:
Q  238 ttttttggggtagccaaggctaccccttgtcaatgaagggatgcgcccctg 288  Q
    ||||||| ||||||||||||||||||||  ||||||| |||| ||||||||    
T  7008811 ttttttgaggtagccaaggctaccccttcacaatgaaaggatacgcccctg 7008761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 19949035 - 19949097
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtag 197  Q
    |||||||||||||||| ||||| || || ||||  ||||||| |||||||||||| |||||||    
T  19949035 tttatgttaattttcgacaactaaacttatttgaaatagctcaatgtttattattcggggtag 19949097  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 16908639 - 16908717
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttat 139  Q
    ||||||||||||| |||| |||| |||||| ||| |||||||||| ||| |||||||| | ||| |||||||||| |||||    
T  16908639 taaatagattaataatgtatttttcaatgt-aaacaaataggttacttgaaagaaact-attgtccatttaatttatttat 16908717  T

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Target: scaffold0795 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 419 - 588
Target Start/End: Complemental strand, 5190 - 5023
Alignment:
Q  419 acctctataaaatgtgactgaaaaatgttgaaacattgcgttcctcaccccttccacaccctcgatctgaacaccattaacattattagagataatcaca 518  Q
    |||||| ||||||| ||||||||  |||||||||| ||| |||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||     
T  5190 acctctttaaaatgagactgaaag-tgttgaaacactgcattcctcaccccttccaaaccctcaatctgaacaccattaacattaatcgagataatcacg 5092  T
Q  519 ttcgaccttctccgagaggacatcaccccatggaaaaaatttagaattgacatcaacttcctttaaccaa 588  Q
    ||| ||||||||| ||||||||||||||| |||  |||||||||||||| ||||| | ||||||| ||||    
T  5091 ttcaaccttctcctagaggacatcaccccgtgg-taaaatttagaattggcatcaccctcctttacccaa 5023  T

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Target: scaffold0361 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 135 - 275
Target Start/End: Complemental strand, 7056 - 6917
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagccgaatattaatttacaccaacttattaaagattaat 234  Q
    |||||| ||||||||| ||||| |||||||||||| |||||| || |||||||||| || |||||| |||| |||||| |||||   ||| |||| ||||    
T  7056 tttatgctaattttcgacaactaaatttgtttggg-tagctcaatatttattatttaggttagccggatataaatttataccaaacaattgaagaataat 6958  T
Q  235 atattttttggggtagccaaggctaccccttgtcaatgaag 275  Q
    |||||||| |||||||||||||||||| ||| || ||||||    
T  6957 atatttttgggggtagccaaggctacctcttatctatgaag 6917  T

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Target: scaffold0186 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 22805 - 22726
Alignment:
Q  60 aaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||||||| |||| ||||||||||||||  ||||||||||||||||||||| ||||||  |||||||| ||||||||    
T  22805 aaatagattaataatgttttttccaatgtaaac-aaataggttatttgcaagaaattcaatgcccatttaatatgtttatg 22726  T

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Target: scaffold0005 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 292254 - 292332
Alignment:
Q  61 aatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    |||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||    
T  292254 aatagattaatagtgtcttttcaaatataaa-taaataggttattcgcaagaaactcattgttcatttaatttgtctatg 292332  T

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Target: scaffold0481 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 6773 - 6701
Alignment:
Q  67 ttaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttatg 140  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||| ||| ||| |||||||||||| ||||    
T  6773 ttaataatgtcttttcaaatgtaaa-taaataggttatttgcaagaaattcattgtccatttaatttgtctatg 6701  T

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Target: scaffold0110 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 7097 - 7159
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtag 197  Q
    ||||| |||||||||| |||||||| ||||||||| || ||| ||||||||||||||||||||    
T  7097 tttatcttaattttcgacaactgaacttgtttggggtaactcaatgtttattatttggggtag 7159  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 428348 - 428426
Alignment:
Q  59 taaatagattaatgatgtcttttccaatgtaaaataaataggttatttgcaagaaactcaatgttcatttaatttgtttat 139  Q
    ||||||||||||| |||| ||||||||||| ||  |||||| ||||||| |||||||| | ||| ||||||||||||||||    
T  428348 taaatagattaataatgtattttccaatgt-aagcaaatagattatttgtaagaaact-attgtccatttaatttgtttat 428426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 428548 - 428611
Alignment:
Q  135 tttatgttaattttcggcaactgaatttgtttgggatagctccatgtttattatttggggtagc 198  Q
    ||||| |||||||| | ||||||||||| ||| || |||||| |||||||||||||| ||||||    
T  428548 tttatattaatttttgacaactgaatttatttagggtagctcaatgtttattatttgaggtagc 428611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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