View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12072_low_12 (Length: 221)
Name: NF12072_low_12
Description: NF12072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12072_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 45 - 207
Target Start/End: Complemental strand, 30400395 - 30400233
Alignment:
| Q |
45 |
tccaatcacattataagcataatgaagaaataacgagataagaaaaagttgaaaaaacagtaacattatgaaaattaaggaacaacctgctcctcattat |
144 |
Q |
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| T |
30400395 |
tccaatcaaattataagcataatgaagaaataacaagataagaaaaagttgaaaaaacagtaacattatgaaaattaaggaacaacctgttcctcattat |
30400296 |
T |
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| Q |
145 |
cactgtcttgagatccagaacatgttccaagacaagaagaatgaaaccctttcagtccctttg |
207 |
Q |
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| T |
30400295 |
cactgtcatgagatccagaacatgttccaagacaagaagaatgaaaccctttcagtccctttg |
30400233 |
T |
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