View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12073_high_1 (Length: 695)

Name: NF12073_high_1
Description: NF12073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12073_high_1
NF12073_high_1
[»] chr3 (49 HSPs)
chr3 (12-403)||(25574711-25575102)
chr3 (12-401)||(48086729-48087118)
chr3 (12-401)||(39415232-39415621)
chr3 (405-678)||(25574366-25574635)
chr3 (16-333)||(47560188-47560509)
chr3 (12-252)||(42947563-42947801)
chr3 (12-252)||(35485443-35485682)
chr3 (12-252)||(53824490-53824731)
chr3 (12-252)||(44833623-44833863)
chr3 (268-400)||(2182556-2182688)
chr3 (12-252)||(16967624-16967859)
chr3 (195-395)||(49742092-49742293)
chr3 (43-252)||(2325283-2325491)
chr3 (187-381)||(23029554-23029749)
chr3 (187-381)||(41649853-41650048)
chr3 (195-333)||(6755709-6755847)
chr3 (12-223)||(42993739-42993954)
chr3 (195-333)||(6462950-6463088)
chr3 (174-284)||(50561447-50561557)
chr3 (187-333)||(49501517-49501664)
chr3 (50-280)||(8628438-8628668)
chr3 (20-114)||(42385478-42385572)
chr3 (192-288)||(49303208-49303305)
chr3 (191-333)||(14995140-14995283)
chr3 (43-289)||(32211122-32211366)
chr3 (191-339)||(7956251-7956399)
chr3 (187-285)||(2447597-2447696)
chr3 (294-402)||(34440684-34440792)
chr3 (48-131)||(25886189-25886272)
chr3 (18-92)||(7955490-7955564)
chr3 (328-402)||(39417921-39417995)
chr3 (195-291)||(25745132-25745229)
chr3 (297-402)||(37282820-37282925)
chr3 (307-370)||(36182825-36182888)
chr3 (328-402)||(53561051-53561125)
chr3 (6-129)||(25744933-25745057)
chr3 (328-400)||(37280603-37280675)
chr3 (49-129)||(42948916-42948996)
chr3 (27-94)||(53825783-53825853)
chr3 (307-370)||(36182788-36182851)
chr3 (159-252)||(42387715-42387807)
chr3 (301-339)||(7956361-7956399)
chr3 (301-339)||(29523213-29523251)
chr3 (335-400)||(23030656-23030721)
chr3 (294-339)||(29523206-29523251)
chr3 (239-291)||(33448638-33448691)
chr3 (264-305)||(37282183-37282224)
chr3 (328-401)||(49499655-49499728)
chr3 (270-370)||(45801924-45802024)
[»] chr1 (47 HSPs)
chr1 (12-402)||(41871618-41872009)
chr1 (15-401)||(48566645-48567030)
chr1 (12-307)||(49597173-49597467)
chr1 (12-394)||(39222596-39222978)
chr1 (12-259)||(46178669-46178915)
chr1 (12-401)||(46923664-46924054)
chr1 (12-364)||(21482829-21483182)
chr1 (12-344)||(3659988-3660320)
chr1 (12-288)||(11012135-11012413)
chr1 (12-236)||(47485603-47485825)
chr1 (43-252)||(50065661-50065869)
chr1 (12-280)||(18171775-18172043)
chr1 (12-234)||(30308400-30308622)
chr1 (191-331)||(47983638-47983778)
chr1 (36-252)||(39650396-39650609)
chr1 (12-135)||(27033083-27033206)
chr1 (195-333)||(5770556-5770694)
chr1 (43-253)||(9343531-9343721)
chr1 (49-280)||(26013527-26013762)
chr1 (191-290)||(18843968-18844067)
chr1 (187-333)||(30858451-30858598)
chr1 (187-333)||(1671312-1671458)
chr1 (187-333)||(7014759-7014906)
chr1 (187-333)||(33686529-33686676)
chr1 (53-333)||(23602806-23603090)
chr1 (199-332)||(20447122-20447255)
chr1 (199-332)||(20532885-20533018)
chr1 (266-404)||(30308262-30308398)
chr1 (195-333)||(5766817-5766955)
chr1 (187-291)||(43138634-43138739)
chr1 (187-333)||(22605393-22605540)
chr1 (328-403)||(48569402-48569477)
chr1 (334-402)||(49597111-49597179)
chr1 (195-333)||(12926782-12926921)
chr1 (328-401)||(18169181-18169254)
chr1 (206-401)||(10308360-10308555)
chr1 (276-342)||(50907240-50907306)
chr1 (187-289)||(15399068-15399171)
chr1 (301-339)||(41871681-41871719)
chr1 (159-246)||(45690896-45690983)
chr1 (23-99)||(45690426-45690505)
chr1 (328-388)||(39225206-39225266)
chr1 (27-99)||(50067008-50067083)
chr1 (48-96)||(3782092-3782140)
chr1 (18-93)||(5767417-5767495)
chr1 (356-400)||(7015054-7015098)
chr1 (190-285)||(49150547-49150643)
[»] chr8 (31 HSPs)
chr8 (12-403)||(34471403-34471794)
chr8 (12-394)||(23542553-23542936)
chr8 (197-394)||(43693561-43693758)
chr8 (12-236)||(43635323-43635545)
chr8 (12-252)||(28704040-28704279)
chr8 (20-134)||(4639922-4640036)
chr8 (16-135)||(10829640-10829759)
chr8 (192-333)||(5913106-5913248)
chr8 (18-287)||(43835138-43835411)
chr8 (187-394)||(1217685-1217893)
chr8 (187-253)||(2766848-2766914)
chr8 (202-339)||(4759208-4759346)
chr8 (328-401)||(43692342-43692415)
chr8 (187-333)||(35161562-35161707)
chr8 (187-333)||(42182615-42182762)
chr8 (187-333)||(9039620-9039767)
chr8 (197-290)||(4322694-4322788)
chr8 (196-289)||(3964008-3964100)
chr8 (247-333)||(15743234-15743321)
chr8 (32-97)||(3964184-3964249)
chr8 (16-77)||(6253936-6253996)
chr8 (275-342)||(20520413-20520480)
chr8 (354-395)||(37226992-37227033)
chr8 (301-370)||(39046611-39046680)
chr8 (23-94)||(43636531-43636605)
chr8 (148-227)||(4639835-4639914)
chr8 (192-250)||(15739697-15739755)
chr8 (301-339)||(34471692-34471730)
chr8 (359-395)||(4322589-4322625)
chr8 (356-400)||(4412597-4412641)
chr8 (303-343)||(20669802-20669842)
[»] chr4 (75 HSPs)
chr4 (16-400)||(38131326-38131707)
chr4 (12-403)||(21712976-21713367)
chr4 (12-390)||(49065357-49065740)
chr4 (12-333)||(42038969-42039295)
chr4 (108-401)||(27761024-27761330)
chr4 (14-289)||(32935683-32935960)
chr4 (72-257)||(31823039-31823225)
chr4 (13-285)||(1227749-1228023)
chr4 (12-285)||(31936135-31936407)
chr4 (12-252)||(47043630-47043868)
chr4 (12-333)||(2777929-2778231)
chr4 (12-252)||(46814051-46814288)
chr4 (12-252)||(886840-887079)
chr4 (12-252)||(14329020-14329261)
chr4 (12-252)||(36174220-36174459)
chr4 (199-370)||(9242917-9243088)
chr4 (12-252)||(28796819-28797059)
chr4 (12-252)||(33161827-33162067)
chr4 (43-207)||(46567339-46567506)
chr4 (12-135)||(53266085-53266207)
chr4 (268-400)||(31822927-31823059)
chr4 (48-288)||(14990156-14990395)
chr4 (187-333)||(42118929-42119076)
chr4 (12-82)||(27760952-27761022)
chr4 (187-339)||(43502270-43502423)
chr4 (187-394)||(34939344-34939552)
chr4 (174-333)||(13856035-13856193)
chr4 (192-402)||(54703523-54703734)
chr4 (159-280)||(372703-372824)
chr4 (187-291)||(52789392-52789497)
chr4 (12-135)||(16524893-16525014)
chr4 (28-129)||(13867633-13867733)
chr4 (197-341)||(14289656-14289800)
chr4 (174-329)||(13867757-13867910)
chr4 (187-333)||(37694497-37694644)
chr4 (18-215)||(18413993-18414190)
chr4 (187-291)||(33985434-33985539)
chr4 (178-287)||(49261760-49261871)
chr4 (275-394)||(21058683-21058802)
chr4 (187-285)||(51242813-51242912)
chr4 (159-252)||(12572565-12572656)
chr4 (195-333)||(24608148-24608286)
chr4 (328-400)||(31825856-31825928)
chr4 (195-289)||(40962687-40962782)
chr4 (187-285)||(54808989-54809088)
chr4 (328-402)||(21710698-21710772)
chr4 (159-252)||(53265990-53266081)
chr4 (18-130)||(372831-372946)
chr4 (43-131)||(40221103-40221191)
chr4 (28-119)||(13855911-13856001)
chr4 (202-288)||(47020065-47020152)
chr4 (189-282)||(45042996-45043090)
chr4 (328-402)||(49063138-49063212)
chr4 (189-263)||(52032689-52032763)
chr4 (294-339)||(850627-850672)
chr4 (331-379)||(27758822-27758870)
chr4 (326-385)||(32938859-32938918)
chr4 (23-101)||(49261601-49261682)
chr4 (272-370)||(9958174-9958272)
chr4 (294-400)||(25146874-25146980)
chr4 (301-403)||(26973304-26973406)
chr4 (301-339)||(38131387-38131425)
chr4 (277-343)||(39463072-39463138)
chr4 (47-92)||(40962537-40962582)
chr4 (317-401)||(157088-157172)
chr4 (342-394)||(33983762-33983814)
chr4 (275-339)||(42563153-42563217)
chr4 (23-97)||(3394650-3394727)
chr4 (294-401)||(48577401-48577508)
chr4 (21-94)||(33163181-33163257)
chr4 (342-403)||(36046039-36046100)
chr4 (23-91)||(36173104-36173175)
chr4 (187-278)||(779441-779533)
chr4 (328-400)||(38132994-38133066)
chr4 (321-401)||(54185085-54185165)
[»] chr7 (38 HSPs)
chr7 (12-401)||(41219186-41219575)
chr7 (143-401)||(18239349-18239607)
chr7 (12-304)||(37523967-37524260)
chr7 (214-399)||(27874038-27874222)
chr7 (197-402)||(39476414-39476619)
chr7 (12-252)||(1536887-1537126)
chr7 (12-333)||(29714254-29714575)
chr7 (171-333)||(8260834-8260997)
chr7 (12-289)||(21153753-21154032)
chr7 (12-114)||(48218491-48218593)
chr7 (28-256)||(26502087-26502314)
chr7 (28-256)||(26590400-26590627)
chr7 (12-252)||(31825869-31826107)
chr7 (12-110)||(18239238-18239336)
chr7 (12-135)||(34354224-34354347)
chr7 (16-222)||(38791072-38791281)
chr7 (187-370)||(3742355-3742534)
chr7 (187-333)||(39283944-39284091)
chr7 (197-304)||(34354385-34354492)
chr7 (187-400)||(4035137-4035351)
chr7 (6-131)||(2913112-2913236)
chr7 (187-294)||(14678298-14678406)
chr7 (187-306)||(37449984-37450104)
chr7 (174-281)||(35126209-35126316)
chr7 (50-203)||(8725726-8725880)
chr7 (159-220)||(48212008-48212069)
chr7 (200-280)||(21613032-21613112)
chr7 (187-259)||(33802972-33803044)
chr7 (294-400)||(38455005-38455111)
chr7 (203-287)||(40144784-40144869)
chr7 (226-287)||(30362750-30362812)
chr7 (328-370)||(30859782-30859824)
chr7 (301-339)||(38455066-38455104)
chr7 (169-257)||(2914620-2914708)
chr7 (23-94)||(20377846-20377920)
chr7 (275-339)||(21066283-21066347)
chr7 (23-94)||(26500962-26501035)
chr7 (23-94)||(26591678-26591751)
[»] chr6 (22 HSPs)
chr6 (12-400)||(319113-319500)
chr6 (14-354)||(13312520-13312864)
chr6 (12-252)||(14153552-14153790)
chr6 (17-252)||(16444465-16444697)
chr6 (12-223)||(35053532-35053743)
chr6 (11-280)||(24173565-24173836)
chr6 (20-252)||(14830590-14830820)
chr6 (187-317)||(23912236-23912366)
chr6 (16-134)||(11718464-11718582)
chr6 (187-291)||(11599016-11599121)
chr6 (190-333)||(30634103-30634247)
chr6 (159-254)||(2419755-2419849)
chr6 (187-288)||(3515203-3515305)
chr6 (300-400)||(4362412-4362512)
chr6 (187-280)||(17399041-17399135)
chr6 (23-94)||(35054777-35054848)
chr6 (27-97)||(17399213-17399283)
chr6 (43-97)||(23912082-23912136)
chr6 (294-339)||(7526807-7526852)
chr6 (328-394)||(11599984-11600050)
chr6 (199-257)||(11718655-11718713)
chr6 (238-291)||(9521409-9521462)
[»] chr5 (41 HSPs)
chr5 (7-318)||(41758518-41758829)
chr5 (12-377)||(6427195-6427558)
chr5 (13-400)||(7083780-7084171)
chr5 (43-381)||(1172777-1173116)
chr5 (12-288)||(25898634-25898913)
chr5 (12-236)||(40016994-40017216)
chr5 (12-331)||(28784569-28784900)
chr5 (12-252)||(3461224-3461463)
chr5 (27-333)||(16100835-16101137)
chr5 (12-236)||(1974370-1974593)
chr5 (14-333)||(11125597-11125916)
chr5 (12-252)||(6270807-6271044)
chr5 (44-285)||(10532795-10533016)
chr5 (12-101)||(20202493-20202582)
chr5 (187-333)||(1081873-1082020)
chr5 (16-114)||(39223078-39223176)
chr5 (35-223)||(4846678-4846866)
chr5 (187-291)||(2786729-2786834)
chr5 (187-291)||(18172120-18172225)
chr5 (188-280)||(10399251-10399343)
chr5 (298-400)||(8688104-8688206)
chr5 (12-135)||(22706413-22706538)
chr5 (187-289)||(40033986-40034090)
chr5 (187-333)||(12144001-12144148)
chr5 (196-286)||(2599801-2599891)
chr5 (187-288)||(7662189-7662291)
chr5 (43-287)||(19043886-19044132)
chr5 (187-291)||(43147411-43147516)
chr5 (187-314)||(34954022-34954150)
chr5 (12-82)||(4846581-4846651)
chr5 (197-321)||(20202605-20202728)
chr5 (18-131)||(9883721-9883837)
chr5 (294-400)||(2740501-2740607)
chr5 (43-97)||(10399119-10399173)
chr5 (159-252)||(19401788-19401879)
chr5 (328-392)||(7081436-7081500)
chr5 (339-370)||(7634092-7634123)
chr5 (328-394)||(7661176-7661242)
chr5 (328-394)||(41757992-41758058)
chr5 (302-338)||(19401897-19401933)
chr5 (328-400)||(34954937-34955009)
[»] chr2 (39 HSPs)
chr2 (144-401)||(29908389-29908646)
chr2 (12-261)||(25685864-25686113)
chr2 (12-261)||(24937208-24937457)
chr2 (16-394)||(29132449-29132828)
chr2 (12-285)||(13785046-13785318)
chr2 (12-365)||(8556160-8556513)
chr2 (12-252)||(12967418-12967656)
chr2 (12-252)||(22495715-22495953)
chr2 (15-252)||(11713156-11713395)
chr2 (203-394)||(12874136-12874327)
chr2 (12-252)||(18394604-18394851)
chr2 (159-333)||(6903674-6903847)
chr2 (12-114)||(42121656-42121758)
chr2 (12-114)||(2155080-2155182)
chr2 (187-333)||(4616623-4616770)
chr2 (187-394)||(32737857-32738065)
chr2 (187-402)||(41192368-41192584)
chr2 (36-288)||(28266006-28266261)
chr2 (187-260)||(20149581-20149654)
chr2 (187-333)||(5814520-5814668)
chr2 (187-291)||(34619886-34619991)
chr2 (187-322)||(37057165-37057301)
chr2 (187-332)||(5290686-5290831)
chr2 (187-291)||(1887915-1888020)
chr2 (335-400)||(43837507-43837572)
chr2 (187-314)||(6728592-6728720)
chr2 (187-291)||(21083765-21083869)
chr2 (331-400)||(42242082-42242151)
chr2 (328-400)||(5813656-5813728)
chr2 (23-97)||(20149424-20149493)
chr2 (300-400)||(11815454-11815554)
chr2 (230-287)||(37891765-37891823)
chr2 (294-399)||(28030427-28030532)
chr2 (202-291)||(26257775-26257866)
chr2 (187-253)||(2195153-2195218)
chr2 (43-129)||(16710088-16710174)
chr2 (159-252)||(42121781-42121872)
chr2 (241-333)||(16710243-16710335)
chr2 (328-400)||(32733934-32734006)
[»] scaffold1455 (1 HSPs)
scaffold1455 (12-256)||(15-258)
[»] scaffold0861 (1 HSPs)
scaffold0861 (12-394)||(3521-3918)
[»] scaffold0223 (1 HSPs)
scaffold0223 (16-286)||(15896-16168)
[»] scaffold0217 (1 HSPs)
scaffold0217 (170-333)||(25553-25717)
[»] scaffold0753 (1 HSPs)
scaffold0753 (199-291)||(3995-4088)
[»] scaffold0051 (2 HSPs)
scaffold0051 (187-321)||(20060-20195)
scaffold0051 (336-400)||(21114-21178)
[»] scaffold1700 (1 HSPs)
scaffold1700 (18-94)||(941-1020)
[»] scaffold0007 (1 HSPs)
scaffold0007 (270-370)||(232408-232508)
[»] scaffold1212 (1 HSPs)
scaffold1212 (308-343)||(1801-1836)


Alignment Details
Target: chr3 (Bit Score: 335; Significance: 0; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 12 - 403
Target Start/End: Complemental strand, 25575102 - 25574711
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25575102 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtat 25575003  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    ||||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25575002 gttataaccaccataaacgtggtcaaaaaaacgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 25574903  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtta 311  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  25574902 tcttcagttctgaccaccgaccaacgtgcgtgagttaactcgcgcataggccagtggtgcgtgacttaagtcacacagaggttacaaggtgcacaagtta 25574803  T
Q  312 agtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattcttt 403  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  25574802 agtcacgcggcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgaccaaaatgtgctgagtgaagagcaacattcttt 25574711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 12 - 401
Target Start/End: Complemental strand, 48087118 - 48086729
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48087118 agagaaatagagggagagagtgaagagggggagaaagtgagatggtgtgaggaaatagggaagtatggaggggtatttataggtgggaatggtagtgtag 48087019  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48087018 gttatatccaccataaatgtggtcaaaaaaatgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 48086919  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtta 311  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  48086918 tagtcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggccagtggtgcgtgacttaagtcatgcagaggttataaggtgcgcaagtta 48086819  T
Q  312 agtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  48086818 agtcacgcagtgtgacttaacttgcgcaagggtatttttgacatggctgcagggcgcaatcaaaatgtgctaggtgaagagcagcattct 48086729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 12 - 401
Target Start/End: Complemental strand, 39415621 - 39415232
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39415621 agagaaatagagggagagagtgaggagggggagaaagtgagatggtgtgaggaaatagggaagtatggaggggtatttataggtgggaatggtagtgtag 39415522  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    |||||||||||||||||| |||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39415521 gttataaccaccataaatatggtcaaaaaaacgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 39415422  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtta 311  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  39415421 tcttcagttctaaccatcggccaacgtgcgtgagttaactcacgcacaggccagtggtgcgtgacttaagtcacgcagaggttataaggtgcgcaagtta 39415322  T
Q  312 agtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    ||||||||||| |||||||| ||| |||||| |||||||| ||||| |||||| ||||| |||||||| ||| |||||||||| ||||||    
T  39415321 agtcacgcagcgtgacttaatttgtgcaaggccatttttggcatggttgcaggacgcgagcaaaatgtactgggtgaagagcaacattct 39415232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 405 - 678
Target Start/End: Complemental strand, 25574635 - 25574366
Alignment:
Q  405 aagaatgaccaccttcaatccatgcaaatattggctttgcatctttaggattacagtttttaagcggtgctccacatagttctctatattgccatcgatg 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25574635 aagaatgaccaccttcaatccatgcaaatattggctttgcatctttaggattacagtttttaagcggtgctccacatagttctctatattgccatcgatg 25574536  T
Q  505 catnnnnnnntttgaagttgagtacccttcagaatatgtttactaaaacagttgaagagccaaatttggaggaattccaccgtaaagtttagtattcgat 604  Q
    |||       || |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25574535 cataaaaaaatt-gaagttgagtacccttcagaatttgtttgctaaaacagttgaagagccaaatttggaggaattccaccgtaaagtttagtattcgat 25574437  T
Q  605 aaatcaagggaattttgaattttcatacctccaactgtgttgtttggtattgttagtcaaaatgagataagttc 678  Q
    |||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||    
T  25574436 aaatcaagggaattttgaattttcatacctccaactg---tttttggtattgttagtcaaaatgagataagttc 25574366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 16 - 333
Target Start/End: Original strand, 47560188 - 47560509
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtta 115  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||||||||||||| ||||     ||||||||||||||| |||||||    
T  47560188 aaatagagggagagagtgaggagggagagaaagtgatatggtgtaaggaaatagggaagtatggaggggtat-----ggtgggaatggtagtctaggtta 47560282  T
Q  116 taaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt-----agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||||||||||||||||||||       |||||||| || ||     | ||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  47560283 taaccaccataaatgtggtcaaaaaaacgtgtaaacttggtaaaaaaaaaaacgtgtagattgaaggttgaaaacctgatcaccgtccaaaacacgtttg 47560382  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgc----gtgacttaagtcacgcagaggttacaaggtgcgca 306  Q
    ||| | || ||   ||||||||||||||||||||||||| ||| ||  | |  ||||||||    |||||||||||||||||||  ||| |||||| |      
T  47560383 ttcgtgagctcatgccaccggccaacgtgcgtgagttaaatcgtgcccaagtcagtggtgcgtgagtgacttaagtcacgcagaacttataaggtgtgtg 47560482  T
Q  307 agttaagtcacgcagcatgacttaact 333  Q
    ||||||||||||| || ||||||||||    
T  47560483 agttaagtcacgcggcgtgacttaact 47560509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 42947801 - 42947563
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  42947801 agagaaatagagggagagagtgagcagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 42947702  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||| ||       |||||||| |  |||  |||| |||||||||||| |||||||| ||||||||   ||||||||||||||    
T  42947701 gttgtaaacaccattaatgtgatc-aaaaaacgtgtaaaatagtgttaaaaatgtgtggattgaatgttgaaaaactgaccacataccaaaaaacgtttg 42947603  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||||||||||  |||||||||||  ||||||||||||||    
T  42947602 ttcttcagttctg--caccggccaactagcgtgagttaactc 42947563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 35485682 - 35485443
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  35485682 agagaaatagagggagagagtgacgagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 35485583  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||||||       |||||||| |  |||  ||||||||||||||||| |||||||| ||||  || | ||||||||||||||    
T  35485582 gttgtaaacaccattaatgtggtcaaaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgatgacagaccaaaaaacgtttg 35485483  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||| |||||||  ||||| |||||  ||| ||||||||||    
T  35485482 ttctttagttctg--caccgaccaactggcgcgagttaactc 35485443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 53824731 - 53824490
Alignment:
Q  12 agagaaatagagggagagagtgaggagggg---aagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtg 108  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||     
T  53824731 agagaaatagagggagagagtgaggagggggagaagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagta 53824632  T
Q  109 taggttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgt 207  Q
    |||||| ||| ||| || |||||||||       |||||||| |  |||  ||||||||||||||||| |||||||| ||||||||   |||||||||||    
T  53824631 taggttgtaaacacgattaatgtggtc-aaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacaaaccaaaaaacgt 53824533  T
Q  208 ttgttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||||||||||  |||||||||||  ||| ||||||||||    
T  53824532 ttgttcttcagttctg--caccggccaactggcgcgagttaactc 53824490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 44833863 - 44833623
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||  |||||||||||||  ||||||||| |||    
T  44833863 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggagcggtatttataggtgcaaatggtagtatag 44833764  T
Q  112 gttataaccaccataaatgtggt-cnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||| ||| |||||| ||| ||||         |||||||| |  |||  ||||||||||||||||| |||||||| ||||||||   |||||||||||||    
T  44833763 gttgtaaacaccattaatatggtaaaaaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacataccaaaaaacgttt 44833664  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||||||||  |||||||||||  ||||||||||||||    
T  44833663 gttcttcagttctg--caccggccaactagcgtgagttaactc 44833623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 268 - 400
Target Start/End: Original strand, 2182556 - 2182688
Alignment:
Q  268 gtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcg 367  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| || |    
T  2182556 gtgcgtgacttaaatcaagcagaggttataaggtgcgcaagttaagtcacgcagcgtgacttaacttacgcaagggcatttttaacatggctgcatggtg 2182655  T
Q  368 cgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    ||| ||||||||| || ||||||||||||||||    
T  2182656 cgagcaaaatgtgttgggtgaagagcagcattc 2182688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 16967624 - 16967859
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||| ||||||||||| |||||| ||||||||| || |||||| ||| |||||||||||||||| |||||||||| ||||||||||||| |||    
T  16967624 agagaaatagatggagagagtgaagagggggagaaagtgatattgtgtgacgaattagggaagtatggaggggtatttatagatgggaatggtagtatag 16967723  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    ||| ||| || ||| | |||||||       |||||||||  |||  ||||||||||||||||| |||||||| ||||||||   | |||||||||||||    
T  16967724 gttgtaaacaacattagtgtggtc-aaaaaacgtgtaaag--tgttaaaaacgtgtggattgaatgttgaaaaactgaccacaaacaaaaaaacgtttgt 16967820  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||||||  |||||||||||  ||| ||||||||||    
T  16967821 tcttcagttctg--caccggccaactggcgcgagttaactc 16967859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 195 - 395
Target Start/End: Original strand, 49742092 - 49742293
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcagaggt 293  Q
    |||||| |||||||||| ||||||||   |||||||| |||| ||||  ||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  49742092 gtccaagaaacgtttgtgcttcagtttctaccaccgggcaacttgcgcaagttaactcgcgcatagactcagtggtgcgtgacttaagtcacgcagagct 49742191  T
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagc 393  Q
    |   |||||||  ||||||||||||| || |||||||||| |||||||| |||||||| ||||||||||||| ||||  |||||||||   |||||||||    
T  49742192 tgtgaggtgcgtgagttaagtcacgctgcgtgacttaactagcgcaaggacatttttggcatggctgcagggtgcgagtaaaatgtgcatggtgaagagc 49742291  T
Q  394 ag 395  Q
    ||    
T  49742292 ag 49742293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 43 - 252
Target Start/End: Original strand, 2325283 - 2325491
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatgg-aggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnn 141  Q
    ||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| | |||| ||| |||||| ||||| |||          
T  2325283 agaaagtgatatggtgtgaggaattaggaaagtatgggaggagtatttataggtgggaatggtagtattggttgtaaacaccattaatgttgtcaaaaaa 2325382  T
Q  142 ncgtgtaaagtt-tgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgc 240  Q
     |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||||  |||||||||||  ||    
T  2325383 -cgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgtttgttcttcagttctg--caccggccaactagc 2325479  T
Q  241 gtgagttaactc 252  Q
    ||||||||||||    
T  2325480 gtgagttaactc 2325491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 187 - 381
Target Start/End: Complemental strand, 23029749 - 23029554
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||| |  |||||||   |||||||||||||  | |  ||||||||| |||||||||| |||||||| |||||||||||||    
T  23029749 tgactaccgtccaagaaacgtttctgtttcagtttctaccaccggccaactagggcaagttaactcccgcataggctcagtggtgcatgacttaagtcac 23029650  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgc 381  Q
    ||| || |||  || ||||  ||||||||||||| || |||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  23029649 gcaaagcttatgagatgcgtgagttaagtcacgctgcgtgacttaactagcgcaagggcatttttggcatggctgcagggcgcgagcaaaatgtgc 23029554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 187 - 381
Target Start/End: Complemental strand, 41650048 - 41649853
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||| ||||| |||||||| | ||||||||||||| ||||  | |||||||||||||||||| ||| ||||||||||||||||||    
T  41650048 tgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaaattaactcgcgcataggctcagtagtgcgtgacttaagtcac 41649949  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgc 381  Q
     ||||| ||   ||||| |  |||||| || ||| || |||||||| || |||||| |||||||||||||||||||||||||||| ||||||||||    
T  41649948 acagagcttgtgaggtgtgtgagttaaatctcgctgcgtgacttaatttacgcaagagcatttttgacatggctgcagggcgcgagcaaaatgtgc 41649853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 6755709 - 6755847
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggtt 294  Q
    ||||||||||||| ||||||| || ||| ||||||||||||| |||||||||||||||||||| | || ||||||| |||||||||||||| || || ||    
T  6755709 gtccaaaaaacgtgtgttcttgagctctaaccaccggccaacttgcgtgagttaactcgcgcacatgccagtggtgtgtgacttaagtcacacaaagctt 6755808  T
Q  295 acaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | ||||||||  |||||||||||||||| ||||||||||    
T  6755809 ataaggtgcgtgagttaagtcacgcagcgtgacttaact 6755847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 42993954 - 42993739
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatt--tataggtgggaatggtagtgt 109  Q
    ||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||  ||||||||| ||||||||| |    
T  42993954 agagaaataaagggagagagcgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttatataggtggaaatggtagtat 42993855  T
Q  110 aggttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtc--caaaaaacg 206  Q
    ||||| ||| || ||| ||||||||        |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | |   |||||||     
T  42993854 aggttgtaaacatcattaatgtggt-ttaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagacaaaaaaaaact 42993756  T
Q  207 tttgttcttcagttctg 223  Q
    |||||||||||||||||    
T  42993755 tttgttcttcagttctg 42993739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 6463088 - 6462950
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggtt 294  Q
    ||||||||||| ||||||||| || | | ||||||||||||| ||||||||||||||| | || | || |||||||||||||||||||||| || || ||    
T  6463088 gtccaaaaaacatttgttcttgagctttaaccaccggccaacttgcgtgagttaactcacacacatgccagtggtgcgtgacttaagtcacacaaagctt 6462989  T
Q  295 acaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | ||||||||  |||||||||||||| | ||||||||||    
T  6462988 ataaggtgcgtgagttaagtcacgcaacgtgacttaact 6462950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 50561557 - 50561447
Alignment:
Q  174 aaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgt 273  Q
    ||||||||||| ||||||||||||||||||| || | ||||| || || |||||||| |||||  ||||||||||||||||||| |||| |||||||| |    
T  50561557 aaggttgaaaaactgaccaccgtccaaaaaatgtgtattcttgagctcagaccaccgaccaacccgcgtgagttaactcgcgcacaggcaagtggtgcat 50561458  T
Q  274 gacttaagtca 284  Q
    |||||||||||    
T  50561457 gacttaagtca 50561447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 49501517 - 49501664
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||| ||||| ||||  ||||||||| |||||| ||| ||||||||||||||||||||||    
T  49501517 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccgaccaacttgcgcaagttaactcacgcataagctcagtggtgcgtgacttaagtcac 49501616  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||| ||   |||||||  ||||||||| ||| |  ||||||||||    
T  49501617 gcagagcttgtgaggtgcgtgagttaagtctcgctgtgtgacttaact 49501664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 50 - 280
Target Start/End: Complemental strand, 8628668 - 8628438
Alignment:
Q  50 gagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnncgtgtaa 149  Q
    ||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||| |||  | ||| ||||||||        ||||||     
T  8628668 gagatagtgtgagtaaatagggaagtatggagggatatttataggtgggaatggtagtataggttgtaaatatcattaatgtggtaaaaaaaacgtgtat 8628569  T
Q  150 agtttgt-agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagtta 248  Q
    | |   | | ||||||||| ||||||| |||||||| |||||||  | | ||||| | |||||||||||||||||| |||||||| || |||||||||||    
T  8628568 aatggataaaaaaacgtgtagattgaatgttgaaaaactgaccaaagactaaaaatcctttgttcttcagttctgatcaccggcc-acctgcgtgagtta 8628470  T
Q  249 actcgcgcataggctagtggtgcgtgacttaa 280  Q
    ||| || ||    | |||||||||||||||||    
T  8628469 acttgcccaccaaccagtggtgcgtgacttaa 8628438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 42385478 - 42385572
Alignment:
Q  20 agagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtt 114  Q
    |||| ||||||| ||||||||| ||||||||| ||| ||| ||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  42385478 agagagagagagagaggagggggagaaagtgatatgatgtcaggaattagggaagtatggatgagtatttataggtggaaatggtagtataggtt 42385572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 192 - 288
Target Start/End: Complemental strand, 49303305 - 49303208
Alignment:
Q  192 accgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgca 288  Q
    ||||||| | |||||||||| |||||||| | ||||||||||||| |||| ||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  49303305 accgtcctagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcgagttaactcgcgcagaggctcagtggtgtgtgacttaagtcacgca 49303208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 14995283 - 14995140
Alignment:
Q  191 caccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgc-ataggctagtggtgcgtgacttaagtcacgcag 289  Q
    ||||||||||||||| | ||||||||||||||| | || |||||| |||||||||||||||||||| | | |  ||||||| ||||||||| |||| ||     
T  14995283 caccgtccaaaaaacatgtgttcttcagttctggctactggccaatgtgcgtgagttaactcgcgcaaaatgtcagtggtgtgtgacttaactcacacaa 14995184  T
Q  290 aggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    || ||| |||||| |  ||||||||||||| || ||||||||||    
T  14995183 agattataaggtgtgttagttaagtcacgctgcgtgacttaact 14995140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 43 - 289
Target Start/End: Complemental strand, 32211366 - 32211122
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnn 142  Q
    |||| ||||||| |||||| ||||| ||||||| | |||| ||||    || ||||||||||||| ||||||||||| ||||||||||| |||           
T  32211366 agaatgtgagatagtgtgaagaaatggggaagttttgaggggtat----agatgggaatggtagtataggttataactaccataaatgtagtcaaaaaaa 32211271  T
Q  143 cgtgtaaagtttgt-agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgacc-accggccaacgtgc 240  Q
    |||||||||  ||| | ||||| ||| ||||||| |||||||| |||||||  ||||||||||| | |||| || || |||| || |||||||| | |||    
T  32211270 cgtgtaaagcgtgtaaaaaaacatgtagattgaatgttgaaaagctgaccaaagtccaaaaaacatgtgtttttgagctctggccaaccggccaccatgc 32211171  T
Q  241 gtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcag 289  Q
     |||||||||| |||||  ||| | ||| || |||||||||||||||||    
T  32211170 atgagttaactagcgcaccggccactggagcatgacttaagtcacgcag 32211122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 191 - 339
Target Start/End: Original strand, 7956251 - 7956399
Alignment:
Q  191 caccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcaga 290  Q
    ||||||||||||||||| ||||||||| || ||||| |||  |||| ||| |||||||||||||||| | |  ||||||| ||| ||||| ||||||| |    
T  7956251 caccgtccaaaaaacgtgtgttcttcaattttgacccccgaacaacctgcatgagttaactcgcgcacatgtcagtggtgtgtgtcttaactcacgcaca 7956350  T
Q  291 ggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
       || ||||||||| |||||||||| || || |||||||||| |||||    
T  7956351 ccatataaggtgcgctagttaagtcatgctgcgtgacttaactagcgca 7956399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 2447696 - 2447597
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggc-tagtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||| ||||||| ||||  ||||||||||||||||||| ||||| |||||||||||| ||||    
T  2447696 tgactaccgtccaagaaacgtttgtgcttcagtttttaccactggccaacttgcgccagttaactcgcgcataggcttagtgttgcgtgacttaactcac 2447597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 294 - 402
Target Start/End: Original strand, 34440684 - 34440792
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagc 393  Q
    ||||| |||| ||||||||| ||||| ||||||||||||||||||| ||| | ||| | ||  |||||| ||||||| | ||| ||||||| ||||||||    
T  34440684 tacaacgtgcacaagttaagacacgctgcatgacttaacttgcgcaggggtaatttaggcaacgctgcaaggcgcgaacgaaaagtgctgaatgaagagc 34440783  T
Q  394 agcattctt 402  Q
    |||||||||    
T  34440784 agcattctt 34440792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 25886272 - 25886189
Alignment:
Q  48 gtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgt 131  Q
    |||||||||||||||||||| | ||||| ||||||  |||||||||||||||||| ||   ||||||||||| |||||||||||    
T  25886272 gtgagatggtgtgaggaaatggagaagtttggagggatatttataggtgggaatgataagataggttataactaccataaatgt 25886189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 7955490 - 7955564
Alignment:
Q  18 atagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttata 92  Q
    |||||||||| ||||||||||||  |||| |||||||||||||||||||| | ||||| | |||| |||||||||    
T  7955490 atagagggagggagtgaggagggtgagaatgtgagatggtgtgaggaaatggagaagtttagaggtgtatttata 7955564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 39417921 - 39417995
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattctt 402  Q
    |||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||  | ||||||||||| ||||||    
T  39417921 ttaactagcgcaagggtatttttggcatggctggagggcgcgagcaaaatgtggagggtgaagagcagaattctt 39417995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 25745132 - 25745229
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgaccac-cggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagag 291  Q
    ||||||||| ||| ||||||| || ||||||||  |||||||| |||||||||||||||| |||  ||| |  || ||||||||||||||||||||||    
T  25745132 gtccaaaaaccgtgtgttcttgagctctgaccaatcggccaacctgcgtgagttaactcgtgcagcggccaaaggagcgtgacttaagtcacgcagag 25745229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 402
Target Start/End: Original strand, 37282820 - 37282925
Alignment:
Q  297 aaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagc 396  Q
    ||||||||| | ||||||||| | || |||||||||| |||||||||||| ||||  |||  ||||||||||||   | |||||||| |||||||||||     
T  37282820 aaggtgcgctacttaagtcacactgcgtgacttaactagcgcaagggcatatttggaatgcttgcagggcgcgagtgatatgtgctgggtgaagagcaga 37282919  T
Q  397 attctt 402  Q
    ||||||    
T  37282920 attctt 37282925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 36182825 - 36182888
Alignment:
Q  307 agttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcga 370  Q
    |||||||||||||||| ||||||||||  |||| || |||||| |||||||||| |||||||||    
T  36182825 agttaagtcacgcagcgtgacttaactcacgcagggtcattttggacatggctgtagggcgcga 36182888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 53561125 - 53561051
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattctt 402  Q
    |||||||||| |||| |||||||| |||||||| | || |||| |||||||||  ||||||||||||| ||||||    
T  53561125 ttaacttgcggaaggacatttttgccatggctgtatggggcgagcaaaatgtgtagagtgaagagcagaattctt 53561051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 25744933 - 25745057
Alignment:
Q  6 agaagcagagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaat-agggaagtatggaggagtatttataggtgggaatggt 104  Q
    ||||| |||| ||||| |||||||||||||||| |   ||| |||||||||||| || ||||  |||||||  ||||| ||||||||| ||||||||  |    
T  25744933 agaagaagagtaatagggggagagagtgaggagagcttgaatgtgagatggtgtaagaaaatgggggaagttaggaggggtatttataagtgggaataat 25745032  T
Q  105 agtgtaggttataaccaccataaat 129  Q
    |   ||||||||||| |||||||||    
T  25745033 aaaataggttataactaccataaat 25745057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 400
Target Start/End: Complemental strand, 37280675 - 37280603
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||||||||||||||| ||||||| |   |||||||||||||| || ||||||| | ||||||||||| ||||    
T  37280675 ttaacttgcgcaagggtatttttggctatgctgcagggcgcgagcagaatgtgcagggtgaagagcagaattc 37280603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 42948996 - 42948916
Alignment:
Q  49 tgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaat 129  Q
    ||||||||||||||||||| ||||||| | |||| ||||||||||| ||  || ||||  ||||||||| | |||||||||    
T  42948996 tgagatggtgtgaggaaatggggaagtttagaggtgtatttatagggggagattgtagcataggttatatctaccataaat 42948916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 53825853 - 53825783
Alignment:
Q  27 gagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatagg 94  Q
    ||||||||||||| ||   |||| |||||||||||||||||||| ||||||| | |||| |||||||||||    
T  53825853 gagagtgaggaggagagtgagaatgtgagatggtgtgaggaaatggggaagtttagaggtgtatttatagg 53825783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 370
Target Start/End: Complemental strand, 36182851 - 36182788
Alignment:
Q  307 agttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcga 370  Q
    ||||||||||||| || ||||||||||  |||| || |||||| ||||||||| ||||||||||    
T  36182851 agttaagtcacgctgcgtgacttaactcacgcagggtcattttggacatggctacagggcgcga 36182788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 42387715 - 42387807
Alignment:
Q  159 aaaacgtgt-ggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||| |||||||| |||||||| |||| ||| | | ||||||   ||||||||||||||||  |||||||||||  ||||||||||||||    
T  42387715 aaaacgtgttggattgaatgttgaaaaactgatcacagacaaaaaaaaaattgttcttcagttctg--caccggccaactagcgtgagttaactc 42387807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 7956399 - 7956361
Alignment:
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  7956399 tgcgctagttaagtcacgcagcatgacttaactagcgca 7956361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 29523251 - 29523213
Alignment:
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  29523251 tgcgcaagttaagtcacgctgcatgtcttaacttgcgca 29523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 400
Target Start/End: Original strand, 23030656 - 23030721
Alignment:
Q  335 gcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    ||||| ||||||||| | ||||||||||||| |||| | ||||||| || ||||||||||| ||||    
T  23030656 gcgcatgggcattttgggcatggctgcagggtgcgagcgaaatgtgttgggtgaagagcagaattc 23030721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 29523206 - 29523251
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||| |||||||||||||| || ||||| ||||||||||||||||    
T  29523206 tacaacgtgcgcaagttaagacatgcagcgtgacttaacttgcgca 29523251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 33448691 - 33448638
Alignment:
Q  239 gcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcagag 291  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||||| ||||    
T  33448691 gcgtgagttaactcgcgcgaaggctcaatggtgcgtgacttaagtcacgtagag 33448638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 37282183 - 37282224
Alignment:
Q  264 agtggtgcgtgacttaagtcacgcagaggttacaaggtgcgc 305  Q
    ||||||||||||||||||||||||| || ||| |||||||||    
T  37282183 agtggtgcgtgacttaagtcacgcaaagcttataaggtgcgc 37282224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 401
Target Start/End: Complemental strand, 49499728 - 49499655
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    |||||| ||||| ||||||||| | ||||||||||||| |||| | ||||||| || |||||||| || |||||    
T  49499728 ttaactagcgcaggggcattttgggcatggctgcagggtgcgaacgaaatgtgttgggtgaagagtagaattct 49499655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 270 - 370
Target Start/End: Original strand, 45801924 - 45802024
Alignment:
Q  270 gcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcg 369  Q
    ||||||||||||||||||| |   ||||| |||||  |||||||||| |  || ||||||||||  |||||||| | ||| | |||||||||||| ||||    
T  45801924 gcgtgacttaagtcacgcataaaatacaacgtgcgttagttaagtcatgttgcgtgacttaactaacgcaagggtaatttaggcatggctgcaggacgcg 45802023  T
Q  370 a 370  Q
    |    
T  45802024 a 45802024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 12 - 402
Target Start/End: Complemental strand, 41872009 - 41871618
Alignment:
Q  12 agagaaatagagggagagagtgaggagggg-aagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgta 110  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41872009 agagaaatagagggagagagtgaggagggggaaaaaagtgagatggtgtgaggaaatagggaagtatggaggggtatttataggtgggaatggtagtgta 41871910  T
Q  111 ggttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    |||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41871909 ggttataaccaccataaatgtggtcaaaaaaacatgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 41871810  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtt 310  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  41871809 ttcttcagttcttaccaccggccaacgtgcgtgagttaactcgcgcataggccagtggtgcgttacttaagtcacacagaggttataaggtgcgcaagtt 41871710  T
Q  311 aagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattctt 402  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||  ||||||||||||||||||    
T  41871709 aagtcatgcagcgtgacttaacttgcgcaagggcatttttggcatggctgtagggcgcgagcaaaatgtgctcggtgaagagcagcattctt 41871618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 15 - 401
Target Start/End: Complemental strand, 48567030 - 48566645
Alignment:
Q  15 gaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtt 114  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  48567030 gaaatagagggagagagtgacgagcgggagaaagtgagatggtgtgaggaaatagggaaatatggaggggtatttataggtgggaatggtagtgtaggtt 48566931  T
Q  115 ataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttct 214  Q
    |||||||||||||||||||||       | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48566930 ataaccaccataaatgtggtcaaaaaaacatgtaaagtttgtagaaaacatgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttct 48566831  T
Q  215 tcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||| |||||  |||||||||||    
T  48566830 tcagttctgaccaccagccaacgtgcgtgagttaactcgcgcataggccagtaatgcgtgacttaagtcacgcaaaggttataaggtctgcaagttaagt 48566731  T
Q  315 cacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    |||||| | ||||||||||| ||||||  |||||||  ||||||||||   | ||| |||||||||||| ||||| |||||||||||    
T  48566730 cacgcaacgtgacttaacttacgcaagaacatttttagcatggctgcataacacgagcaaaatgtgctgggtgaa-agcagcattct 48566645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 12 - 307
Target Start/End: Complemental strand, 49597467 - 49597173
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  49597467 agagaaacatagggagagagtgaggagggggagaaagtgagatggtgtgaggaaatagggaagtatggaggggtatttataggtgggaatggtggtgtag 49597368  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49597367 gttataaccaccataaatgtggtcaaaaaat-gtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaatcgtttgt 49597269  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaa 307  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||| ||| |||||||    
T  49597268 tctttagttctgaccaccgaccaacgtgcgtgagttaactcgcgcataggccagtggtgcgtgacttaagtcacgctgaagttataagatgcgcaa 49597173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 12 - 394
Target Start/End: Complemental strand, 39222978 - 39222596
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||    
T  39222978 agagaaatagagggagagagtgaggaggaggagaaagtgagatggtgtgaggaattagggaagtatggaggggtatttatacgtgggaatggtagtatag 39222879  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttg-tagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    |||  ||  ||||| |||||||||        ||||||| |||| || |||||||||||| |||| |||| ||| |||| ||  | ||||||||||||||    
T  39222878 gttgaaaataccattaatgtggtcaaaaaat-gtgtaaaatttggtaaaaaacgtgtggaatgaatgttggaaaactgatcaaggaccaaaaaacgtttg 39222780  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtt 310  Q
    |||||||| ||||||||||| |||  ||||||||||||||||| |||||||| | ||||||||||||||||||||||| || ||| |||| |||| ||||    
T  39222779 ttcttcagctctgaccaccgaccatggtgcgtgagttaactcgtgcataggccattggtgcgtgacttaagtcacgcatagattataaggcgcgctagtt 39222680  T
Q  311 aagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    ||||||||| || |||||||||| |||||||| |||||||| |||||||||||||||||| |||||||||| | ||||||||||    
T  39222679 aagtcacgctgcgtgacttaactagcgcaaggacatttttggcatggctgcagggcgcgagcaaaatgtgcagggtgaagagca 39222596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 12 - 259
Target Start/End: Complemental strand, 46178915 - 46178669
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  46178915 agagaaatagagggagagagtgaggagggggagaaagtgagatcgtgtgaagaaatagggaagtatggagggatatttataggtggaaatggtagtgtag 46178816  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    |||||||| ||||||||| |||||       |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  46178815 gttataac-accataaatatggtcaaaaaaacgtgtaaagtttgtagaaaaagtgtggattgaaggttgaaaacctgaccaccggccaaaaaacgtttgt 46178717  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcata 259  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  46178716 tcttcagttctgaccaccggtcaacatgcgtgagttaactcgcgcata 46178669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 12 - 401
Target Start/End: Complemental strand, 46924054 - 46923664
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||   |||||||||||||||||| |||| |||    
T  46924054 agagaaatagagggagagagtgaggaggaggagaaagtgagatggtgtgaggaattagggaagtatggagagatatttataggtgggaatgatagtatag 46923955  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaac--gtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||| |||  ||||| |||||||||       |||||||| || ||| ||||   ||||||| |||| |||| ||| |||| ||  | |||||||| ||||    
T  46923954 gttgtaaataccattaatgtggtcaaaaaa-cgtgtaaatttggtaaaaaaaatgtgtggaatgaatgttggaaaactgatcaaggaccaaaaaatgttt 46923856  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagt 309  Q
    ||||||||  |||||||||||| ||  |||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||| ||||||||| |||    
T  46923855 gttcttcatctctgaccaccggacatggtgcgtgagttaactcgcgcataggccattggtgcgtgacttaagtcacgcatagattataaggtgcgctagt 46923756  T
Q  310 taagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    |||||||||  || |||| ||||| ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||| |||||    
T  46923755 taagtcacgttgcgtgacgtaactagcgcaagggcatttttggcatggctgcagggcgcgagcaaaatgtgcagggtgaagagcagaattct 46923664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 12 - 364
Target Start/End: Complemental strand, 21483182 - 21482829
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||    
T  21483182 agagaaatagagggagagagtgaggaggaggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttatatgtgggaatggtagtatag 21483083  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttg-tagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| |||  ||||| |||||||||        |||||||  ||| || |||||||||||| |||| |||||||| |||||||  | | |||||| |||||    
T  21483082 gttgtaaataccattaatgtggtcaaaaaaatgtgtaaaacttggtaaaaaacgtgtggaatgaatgttgaaaaactgaccaaagactaaaaaaagtttg 21482983  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtt 310  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| |  ||||    
T  21482982 ttcttcagctctgaccatcggccaacgtgcgtgagttaactcgtgcataggctagtggtgcgtgacttaagtcacgcagagcttataaggtgtgttagtt 21482883  T
Q  311 aagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagg 364  Q
    ||||||||| || |||||||| |  ||||| ||||| || |  |||||||||||    
T  21482882 aagtcacgctgcgtgacttaattaacgcaaaggcatattaggaatggctgcagg 21482829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 12 - 344
Target Start/End: Original strand, 3659988 - 3660320
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| |||    
T  3659988 agagaaatagaggaagagagtgaggaggaggagaaagtgagatggtatgagaaattagggaagtatggaggagtatttataggtgggaatggtagtatag 3660087  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt--agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||| |||  ||||| |||||||||        ||||||| ||||   | |||||||||||| |||| |||||||| | |||||  | | |||||||||||    
T  3660088 gttgtaaataccattaatgtggtcaaaaat--gtgtaaaatttggtaaaaaaacgtgtggaatgaatgttgaaaaaccgaccaaagacaaaaaaacgttt 3660185  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagt 309  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||| |||    
T  3660186 gttcttcagctctgaccaccggccaaggtgcgtgagttaactcgcgcataggccaatggtgcgtgacttaagtcacgcagagcttataaggtgcgctagt 3660285  T
Q  310 taagtcacgcagcatgacttaacttgcgcaagggc 344  Q
    |||||||||| |   ||||||||| ||||||||||    
T  3660286 taagtcacgctgtgcgacttaactagcgcaagggc 3660320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 12 - 288
Target Start/End: Complemental strand, 11012413 - 11012135
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  11012413 agagaaatagagggagagagtgagaagggagagaaagtgatatggtgtgaggaaatagggaagtatgaaagggtatttataggtgggaatggtagtgtag 11012314  T
Q  112 gttataaccaccataaatgtggt-cnnnnnnncgtgtaaagtttgtagaa-aacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    |||||||||||||||||||||||         ||||||||| ||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  11012313 gttataaccaccataaatgtggtaaaaaaaaacgtgtaaaggttgtaaaagaacgtgtggattgaaagttgaaaacttgaccaccgtccaaaaaacgttt 11012214  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgca 288  Q
    |||| | || ||  ||||||||||||||||||||||||||||| |||  |||| ||||||| | ||||||| |||||||    
T  11012213 gttcatgagctcataccaccggccaacgtgcgtgagttaactcacgcccaggccagtggtgtgcgacttaactcacgca 11012135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 47485825 - 47485603
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  47485825 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 47485726  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||||||        ||||||| |  |||  ||||||||||||||||| |||||||| ||||||||   |||||||||| |||    
T  47485725 gttgtaaacaccattaatgtggtcaaaaaaa-gtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacataccaaaaaacggttg 47485627  T
Q  211 ttcttcagttctgaccaccggccaac 236  Q
    |||||||||||||  |||||||||||    
T  47485626 ttcttcagttctg--caccggccaac 47485603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 43 - 252
Target Start/End: Complemental strand, 50065869 - 50065661
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnn 142  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||| |||||||||           
T  50065869 agaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaaa 50065770  T
Q  143 cgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcg 241  Q
    ||| |||| |  |||  ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||||  ||||||||||| ||||    
T  50065769 cgtataaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgtttgttcttcagttctg--caccggccaacctgcg 50065672  T
Q  242 tgagttaactc 252  Q
    |||||||||||    
T  50065671 tgagttaactc 50065661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 12 - 280
Target Start/End: Original strand, 18171775 - 18172043
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||| |||||||||||||| |||    
T  18171775 agagaaatagagggagagagtgaggagggggagaaagtgagatggtgtgaggaattagggaagtatggagggatatttataagtgggaatggtagtatag 18171874  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttg--tagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||| ||| |||||| ||| |||||       |||||||| ||||   | |||||||||| | |||| |||||||| |||||||  | || || |||||||    
T  18171875 gttgtaaacaccattaatatggtc-aaaaaacgtgtaaaatttggcaaaaaaacgtgtgaaatgaatgttgaaaa-ctgaccaaagacccaagaacgttt 18171972  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaa 280  Q
    |||||||||  || |||||| |||||  ||||||| |||||||| ||||| |  | |||||| ||||||||    
T  18171973 gttcttcagagctaaccaccagccaagctgcgtgatttaactcgtgcataagacactggtgcctgacttaa 18172043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 12 - 234
Target Start/End: Complemental strand, 30308622 - 30308400
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||| |||||||||||||| | ||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||||||| |||    
T  30308622 agagaaatagaggaagagagtgaggaggaggagaaagtgagaaggtgtgaggaattagggaagtattgaggggtatttataggtgggaatggtagtatag 30308523  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagttt-gtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| |||  ||||| |||||||||       ||| |||| ||| ||| |||| ||||||| |||| |||| ||| |||| ||  | ||||||||| ||||    
T  30308522 gttgtaaataccattaatgtggtc-aaaaaacgtataaaatttggtaaaaaatgtgtggaatgaatgttggaaaactgatcaaagaccaaaaaacatttg 30308424  T
Q  211 ttcttcagttctgaccaccggcca 234  Q
    |||||||| ||| |||||||||||    
T  30308423 ttcttcagctcttaccaccggcca 30308400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 47983778 - 47983638
Alignment:
Q  191 caccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcaga 290  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| | || ||||||  ||||||||| |||||||||    
T  47983778 caccgtccaaaaaacgtgtgttctttagttctgaccaccggccaacgtgcgtcagttaactcgcgcacatgccagtggtaagtgacttaactcacgcaga 47983679  T
Q  291 ggttacaaggtgcgcaagttaagtcacgcagcatgacttaa 331  Q
       || ||||||||  ||||||||||||| || ||||||||    
T  47983678 acatataaggtgcgttagttaagtcacgctgcgtgacttaa 47983638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 36 - 252
Target Start/End: Complemental strand, 39650609 - 39650396
Alignment:
Q  36 gaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtc 135  Q
    |||||| ||||| ||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||| |||| || ||| ||| |||||| ||| ||||     
T  39650609 gagggggagaaaatgatatggtgtgaggaattagggaagtatgaaggggtatttataggtgggaatgatagtatatgttgtaaacaccattaatatggt- 39650511  T
Q  136 nnnnnnncgtgtaaagtt-tgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggcca 234  Q
           |||||||| |  |||  |||| |||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||||  |||||||||    
T  39650510 -aaaaaacgtgtaaaatagtgttaaaaatgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgtttgttcttcagttctg--caccggcca 39650414  T
Q  235 acgtgcgtgagttaactc 252  Q
    ||  || |||||||||||    
T  39650413 actagcatgagttaactc 39650396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 27033206 - 27033083
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| || || ||||||| | |||||||||||||| ||||||||||||| ||||| |||| |||    
T  27033206 agagaaatagagggagagagtgaggagggggagaaagtgatatcgtatgaggaattcgggaagtatggaggggtatttataggtgagaatgatagtatag 27033107  T
Q  112 gttataaccaccataaatgtggtc 135  Q
    ||||||| || ||| || ||||||    
T  27033106 gttataaacatcattaacgtggtc 27033083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 5770556 - 5770694
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggtt 294  Q
    ||||| ||||||| |||| || || ||| ||||||||||| | ||||||||||| |||||||| |||| |||||||||||||||||| |||||| || ||    
T  5770556 gtccataaaacgtgtgtttttgagctctaaccaccggccaccttgcgtgagttagctcgcgcacaggccagtggtgcgtgacttaagccacgcaaagctt 5770655  T
Q  295 acaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | ||||||||  |||||||||||||||| ||||||||||    
T  5770656 ataaggtgcgtgagttaagtcacgcagcgtgacttaact 5770694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 43 - 253
Target Start/End: Complemental strand, 9343721 - 9343531
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnn 142  Q
    |||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||| ||||||||||||              
T  9343721 agaaggtgatatggtgtgaggaaatagggaagtatggagggatatttataggtgggaatgatagtataggttataactaccataaatgtg---------- 9343632  T
Q  143 cgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgt 242  Q
       ||||       | |||||||||  |||||||||||||||||||||||||||||||||||||| || |||| || || || ||||||  ||| |||||    
T  9343631 ---gtaa-------aaaaaacgtgtaaattgaaggttgaaaacctgaccaccgtccaaaaaacgtgtgctcttgagctcggatcaccggttaacctgcgt 9343542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 49 - 280
Target Start/End: Original strand, 26013527 - 26013762
Alignment:
Q  49 tgagatggtgtgaggaaatagggaagtatggaggagtattt-ataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnncgtgt 147  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||| ||||| |||| || |||||||| | ||||||||| |||       |||||    
T  26013527 tgagatggtgtgaggaaatagggaagtatggagaggtattttataggtgagaatgatagtataagttataacaaacataaatgtagtcaaaaaa-cgtgt 26013625  T
Q  148 aaagttt-gtagaaaa---cgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtg 243  Q
    ||| ||| ||| ||||   | ||||||||||| |||||| | | |||||  ||| |||||| ||||||||||||||||||||||||||  ||||| || |    
T  26013626 aaaattttgtaaaaaaaaacatgtggattgaatgttgaataaccgaccaaagtctaaaaaatgtttgttcttcagttctgaccaccgggtaacgtacgcg 26013725  T
Q  244 agttaactcgcgcataggctagtggtgcgtgacttaa 280  Q
    ||||||| |||||| ||   |||||||||||||||||    
T  26013726 agttaacccgcgcacagatcagtggtgcgtgacttaa 26013762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 18843968 - 18844067
Alignment:
Q  191 caccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcaga 290  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |  | ||||||| |||||||||||||||||||    
T  18843968 caccgtctaaaaaacgtgtgttcttcagttctgatcaccggccaacgtgcgtgagttaacttgcgcacataccagtggtgtgtgacttaagtcacgcaga 18844067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 30858598 - 30858451
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||| |||| |||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||| | ||||| | ||||   |||||||||||||    
T  30858598 tgaccatcgtctaaaaaacgtttgttcttcagctttgaccaccggccaacttgcgcgagttaactcgcgtagaggctcaatggtttatgacttaagtcac 30858499  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
     ||||| ||  ||||||||  ||||||||||||| |||||||||||||    
T  30858498 acagagcttgtaaggtgcgtgagttaagtcacgctgcatgacttaact 30858451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 1671312 - 1671458
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||| ||||||||||||| ||||| |||||| |||||||||||||      
T  1671312 tgaccaccgtccaaaa-acgtttgttcttcagttttgaccaccgaccaacttgcgtgcgttaactcgcgcagaggctcagtggttcgtgacttaagtcct 1671410  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    ||| |  ||  ||||||||  | ||||||||||| || ||||||||||    
T  1671411 gcaaaacttgtaaggtgcgtgaattaagtcacgctgcgtgacttaact 1671458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 7014759 - 7014906
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggc-tagtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||||||||| ||||  |||||||||||||||| || |||||||||||||||||||||||    
T  7014759 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcatatgcttagtggtgcgtgacttaagtcac 7014858  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | |||| ||   |||||||  ||||||||| ||| |  ||||||||||    
T  7014859 gtagagcttgtgaggtgcgtgagttaagtctcgctgtgtgacttaact 7014906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 33686529 - 33686676
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||| ||||| |||||||| | ||||||||||||| | ||  |||||||||||||||||||| ||||||||||||||||||||||    
T  33686529 tgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttacgcaagttaactcgcgcataggctcagtggtgcgtgacttaagtcac 33686628  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    ||| || ||   |||||||  ||||||||| ||| || ||||||||||    
T  33686629 gcaaagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaact 33686676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 53 - 333
Target Start/End: Original strand, 23602806 - 23603090
Alignment:
Q  53 atggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnnc-gtgtaaag 151  Q
    ||||||||||||||| ||||||| | ||||  |||||||||||| ||||||||   ||||||||||| ||||||||| | ||          |||||||     
T  23602806 atggtgtgaggaaatggggaagtttagagggatatttataggtgagaatggtaacataggttataactaccataaatctagtaaaaaaaaaagtgtaaaa 23602905  T
Q  152 tttgtagaaaa-cgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccacc-ggccaacgtgcgtgagttaa 249  Q
     ||||| |||| ||||| ||||||| ||||||||  ||||||    ||||||||||| ||||||| || |||||| | | ||||||| |||| |||||||    
T  23602906 gttgtaaaaaaacgtgtagattgaaagttgaaaagatgaccaaataccaaaaaacgtgtgttcttgagctctgactaactggccaacctgcgcgagttaa 23603005  T
Q  250 ctcgcgcataggctagtggtgcgtgacttaagtcacgcagaggt-tacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||||| | |||||| |||||||||||||||||||| ||| | ||  || ||| | |||||||||||||| | ||||||||||    
T  23603006 ctcgcgcacaagctagttgtgcgtgacttaagtcacgctgagatatattagatgcacgagttaagtcacgcaacgtgacttaact 23603090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 20447255 - 20447122
Alignment:
Q  199 aaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcagaggttaca 297  Q
    |||||| ||||||||||||||||||||||||| |||||  ||||||||||||||||||  ||||| || ||||||| |||||||||||||| | | || |    
T  20447255 aaaaaaagtttgttcttcagttctgaccaccgaccaactagcgtgagttaactcgcgcgaaggctcaggggtgcgtaacttaagtcacgca-aagctata 20447157  T
Q  298 aggtgcgcaagttaagtcacgcagcatgacttaac 332  Q
    | ||| |  |||||||||||||||| |||||||||    
T  20447156 acgtgtgtgagttaagtcacgcagcgtgacttaac 20447122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 20533018 - 20532885
Alignment:
Q  199 aaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcagaggttaca 297  Q
    |||||| ||||||||||||||||||||||||| |||||  ||||||||||||||||||  ||||| || ||||||| |||||||||||||| | | || |    
T  20533018 aaaaaaagtttgttcttcagttctgaccaccgaccaactagcgtgagttaactcgcgcgaaggctcaggggtgcgtaacttaagtcacgca-aagctata 20532920  T
Q  298 aggtgcgcaagttaagtcacgcagcatgacttaac 332  Q
    | ||| |  |||||||||||||||| |||||||||    
T  20532919 acgtgtgtgagttaagtcacgcagcgtgacttaac 20532885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 30308398 - 30308262
Alignment:
Q  266 tggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcaggg 365  Q
    ||||||||||||||||||||  | | |||| ||||||| |  |||||||||||| || ||||||||||  |||||   |||||||| |||||||||||||    
T  30308398 tggtgcgtgacttaagtcac--ataagttataaggtgcactggttaagtcacgctgcgtgacttaactaacgcaaaaacatttttggcatggctgcaggg 30308301  T
Q  366 cgcgatcaaaatgtgctgagtgaagagcagcattcttta 404  Q
    ||||| |||||||||| | ||||||||| | ||||||||    
T  30308300 cgcgagcaaaatgtgcagggtgaagagctgaattcttta 30308262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 5766817 - 5766955
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggtt 294  Q
    |||||||||| || |||| || || ||| |||||||| || | || ||||||||||||||||| |||| |||||||||||||||||| |||||| || ||    
T  5766817 gtccaaaaaaagtgtgtttttaagctctaaccaccggtcaccttgtgtgagttaactcgcgcacaggccagtggtgcgtgacttaagccacgcaaagctt 5766916  T
Q  295 acaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | |||||| |  ||||||| || ||||| ||||||||||    
T  5766917 ataaggtgtgtgagttaagccatgcagcgtgacttaact 5766955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 43138634 - 43138739
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | | ||||||||||  ||||  |||||||||||||||||||| ||||||||| ||||||| ||||    
T  43138634 tgactaccgtccaagaaacgtttgtgcttcagtttttatcaccggccaatttgcgcaagttaactcgcgcataggctcagtggtgcgcgacttaaatcac 43138733  T
Q  286 gcagag 291  Q
    ||||||    
T  43138734 gcagag 43138739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 22605540 - 22605393
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    ||||||||||||||||||||| | |||||||||| | ||||||||| ||| ||||  |||||||||| | | ||||| | ||||||||||||||||||||    
T  22605540 tgaccaccgtccaaaaaacgtatattcttcagtttttaccaccggctaacttgcgcaagttaactcgtgtagaggctcaatggtgcgtgacttaagtcac 22605441  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | |||| ||   |||||||  | ||||||||||| ||  |||||||||    
T  22605440 gtagagcttgtgaggtgcgtgacttaagtcacgctgcgcgacttaact 22605393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 403
Target Start/End: Original strand, 48569402 - 48569477
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattcttt 403  Q
    |||||| ||||||||||||||||| |||||| ||||||||||| |||||||||| | ||||||||||| |||||||    
T  48569402 ttaactagcgcaagggcatttttggcatggcagcagggcgcgagcaaaatgtgcagggtgaagagcagaattcttt 48569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 49597179 - 49597111
Alignment:
Q  334 tgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattctt 402  Q
    ||||||| | |||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  49597179 tgcgcaaagacatttttggcatggctgcagggcgcgagcaaaatgtactgcgtgaagagcagcattctt 49597111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 12926921 - 12926782
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcagaggt 293  Q
    |||||| |||||||||| |||||||| | ||||   |||||| ||||  |||||||||||||||||||| |||||||| ||||||||||| ||||||| |    
T  12926921 gtccaagaaacgtttgtgcttcagtttttaccattagccaacttgcgcaagttaactcgcgcataggctcagtggtgcatgacttaagtcgcgcagagct 12926822  T
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |   ||||||   ||||||||| ||| || ||||||||||    
T  12926821 tgtgaggtgcatgagttaagtctcgctgcgtgacttaact 12926782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 328 - 401
Target Start/End: Complemental strand, 18169254 - 18169181
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    |||||||||||||| | ||||||| ||||||||||||| |||| |||||||||| | ||||||||||| |||||    
T  18169254 ttaacttgcgcaagagtatttttggcatggctgcagggtgcgagcaaaatgtgcagggtgaagagcagaattct 18169181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 206 - 401
Target Start/End: Complemental strand, 10308555 - 10308360
Alignment:
Q  206 gtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgc 305  Q
    |||||| |||||||  | ||||||||||||| ||||  ||||||||| |||| | || |||||||||||||||||||||| || || ||   |||||||     
T  10308555 gtttgtgcttcagtgtttaccaccggccaacttgcgcaagttaactcacgcacatgccagtggtgcgtgacttaagtcacacaaagcttgtgaggtgcgt 10308456  T
Q  306 aagttaagtcacgcagcatgacttaacttgcgcaagggcat-ttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
     ||||||||| ||| || ||||||||||  |||| ||  || ||| || |  | |||||||||||| |||||||||| | ||||||||||| |||||    
T  10308455 gagttaagtctcgctgcgtgacttaactcacgcagggttatatttagaaaatg-tgcagggcgcgagcaaaatgtgcagggtgaagagcagaattct 10308360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 50907306 - 50907240
Alignment:
Q  276 cttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagg 342  Q
    ||||||||||||| |||   ||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  50907306 cttaagtcacgcataggactcaacgtgcgcatgttaagtcacgcatcatgacttaacttgcgcaagg 50907240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 15399171 - 15399068
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||| | |||||||||| ||||| || | ||||||  ||||| ||||| |||||||||||||| || ||  |||||||||||||||| ||||    
T  15399171 tgacaaccgtcccataaacgtttgtgcttcaatttttaccaccatccaacttgcgtaagttaactcgcgcagagactcggtggtgcgtgacttaactcac 15399072  T
Q  286 gcag 289  Q
    ||||    
T  15399071 gcag 15399068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 41871681 - 41871719
Alignment:
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  41871681 tgcgcaagttaagtcacgctgcatgacttaacttgcgca 41871719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 45690896 - 45690983
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccac-cgtccaaaaaacg-tttgttcttcagttctgaccaccggccaacgtgcgtgagt 246  Q
    ||||||||||||||||| |||||||| ||||||||  ||| |||||||| ||| |||||||||||||  |||||||||||  ||||||||    
T  45690896 aaaacgtgtggattgaatgttgaaaaactgaccacgggtcaaaaaaacgttttattcttcagttctg--caccggccaactagcgtgagt 45690983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 45690426 - 45690505
Alignment:
Q  23 gggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtggga 99  Q
    ||||||||||||||||| ||   |||| |||||||| ||||||||||| ||||||| | |||| ||||||||||| ||||    
T  45690426 gggagagagtgaggaggagagtgagaatgtgagatgatgtgaggaaatggggaagtttagaggtgtatttatagggggga 45690505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 39225206 - 39225266
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtga 388  Q
    |||||| ||||||| |||||||| ||||||||||||| ||||| |||||| | ||||||||    
T  39225206 ttaactagcgcaagagcatttttaacatggctgcaggacgcgagcaaaatatactgagtga 39225266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 50067083 - 50067008
Alignment:
Q  27 gagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtggga 99  Q
    ||||||||||||| ||   |||| |||||||||||||||||||| ||||||| | |||  ||||||||||| ||||    
T  50067083 gagagtgaggaggagagtgagaatgtgagatggtgtgaggaaatggggaagtttagagatgtatttatagggggga 50067008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 3782140 - 3782092
Alignment:
Q  48 gtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtg 96  Q
    ||||||||||||||| ||||  |||||| |||||| |||||||||||||    
T  3782140 gtgagatggtgtgagaaaatgaggaagtttggaggggtatttataggtg 3782092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 5767417 - 5767495
Alignment:
Q  18 atagagggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatag 93  Q
    |||| |||||||||| |||||| ||   |||| ||||||||||||||| |||| ||||||| |||| | ||||||||||    
T  5767417 atagggggagagagtcaggaggagagtgagaatgtgagatggtgtgagaaaatggggaagtttggaagtgtatttatag 5767495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 356 - 400
Target Start/End: Original strand, 7015054 - 7015098
Alignment:
Q  356 ggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    ||||||||||||||| |||||||||||| ||| ||||||| ||||    
T  7015054 ggctgcagggcgcgagcaaaatgtgctgggtggagagcagaattc 7015098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 49150643 - 49150547
Alignment:
Q  190 ccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    ||||||||| | |||||||| | ||| |||| | ||||||||||||  ||||  ||| ||| |||||| ||||| ||||||||||||||||| ||||    
T  49150643 ccaccgtcccagaaacgtttatgcttaagtttttaccaccggccaatttgcgcaagtcaacgcgcgcagaggctcagtggtgcgtgacttaactcac 49150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 12 - 403
Target Start/End: Original strand, 34471403 - 34471794
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  34471403 agagaaatagagggagagagtgaggagggggagaaagtgagatgatgtgaggaaataggaaagtatggaggggtatttataggtgggaatggtagtgtag 34471502  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncg-tgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||||||||||||||||||||||||        | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34471503 gttataaccaccataaatgtggtcaaaaaaaaggtgtaaagtttgtagaaaatgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 34471602  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtt 310  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| || ||| ||||||||||||||    
T  34471603 ttcttcagttctaaccaccggccaacgtgcgtgagttaactcgcgcata-gccaatggtgcgtgacttaagtcacgcatagtttataaggtgcgcaagtt 34471701  T
Q  311 aagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattcttt 403  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||  || |||||||||| ||||||||    
T  34471702 aagtcacgcagcgtgacttaacttgcgcaaagacatttttgacatggctgcagggcgcgagcaaaatgtattgggtgaagagcaacattcttt 34471794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 12 - 394
Target Start/End: Original strand, 23542553 - 23542936
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||| |||| ||     
T  23542553 agagaaatagagggagagagtgaggagggggagatagtgatatgatgtgaggaattagggaagtatggaggggtatttataggtgggaatgatagtataa 23542652  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt--agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||| |||  | ||| ||| |||||       |||||||| ||||   | |||| ||||||| |||| |||||||| |||||||  | | |||||| ||||    
T  23542653 gttgtaaatatcattaatatggtcaaaaaa-cgtgtaaaatttggtaaaaaaatgtgtggagtgaatgttgaaaaactgaccaaagacaaaaaaatgttt 23542751  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagt 309  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| | |||| |  | |    
T  23542752 gttcttcagttctgaccaccgaccaacgtgcatgagttaactcgcgcataggccagtggtgcgtgaattaagtcacgcagagcttatacggtgtgttatt 23542851  T
Q  310 taagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    ||||||||||||  ||||||| ||  ||| |||| || || |  ||||||||||||||||| | |||||||||| ||||||||||    
T  23542852 taagtcacgcagtgtgacttacctaacgcgagggtatattaggaatggctgcagggcgcgagcgaaatgtgctgggtgaagagca 23542936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 197 - 394
Target Start/End: Original strand, 43693561 - 43693758
Alignment:
Q  197 ccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttac 296  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||| || | |||||||||| ||||||||| || || |||     
T  43693561 ccaaaaaacgtttgttcttcagctctgaccaccggccatggtgcgtgagtttactcgcgcataagccattggtgcgtgaattaagtcacacatagattat 43693660  T
Q  297 aaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    ||||||||| ||||||||||||| || |||| ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| | ||||||||||    
T  43693661 aaggtgcgctagttaagtcacgctgcgtgacctaactagcgcaaggacatttttggcatggctgcagggcgcgagcaaaatgtgcagggtgaagagca 43693758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 43635545 - 43635323
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  43635545 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 43635446  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgt-aaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||||||        |||| |||   |||  ||||||||||||||||| |||||||| ||||||||    |||||||||||||    
T  43635445 gttgtaaacaccattaatgtggtcaaaaaaa-gtgtgaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacaaatcaaaaaacgtttg 43635347  T
Q  211 ttcttcagttctgaccaccggccaac 236  Q
    |||||||||||||  |||||||||||    
T  43635346 ttcttcagttctg--caccggccaac 43635323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 28704279 - 28704040
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  28704279 agagaaatagagggagagagtgaagagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 28704180  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtcc-aaaaaacgttt 209  Q
    ||||||| |||||| ||| |||||       |||| ||| |  |||  ||||||||||||||||| |||||||| ||| |||| | || |||||||||||    
T  28704179 gttataaacaccattaatatggtc-aaaaaacgtgaaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgtccacagaccaaaaaaacgttt 28704081  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||||| |||||  |||||||||||  ||| ||||||||||    
T  28704080 gttcttcaattctg--caccggccaactggcgcgagttaactc 28704040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 4640036 - 4639922
Alignment:
Q  20 agagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataac 119  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||| | |||||| |||     
T  4640036 agagagagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggattggtaatataggttgtaaa 4639937  T
Q  120 caccataaatgtggt 134  Q
    |||||| ||||||||    
T  4639936 caccatcaatgtggt 4639922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 10829759 - 10829640
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtta 115  Q
    |||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||| |||| ||||   |||||||||||||||||||||| |||||||    
T  10829759 aaatagagggagagagtgaggatggagagaaagtgatatggtgtgaggaaatagggaggtatagagggaaatttataggtgggaatggtagtataggtta 10829660  T
Q  116 taaccaccataaatgtggtc 135  Q
    |||  | ||| |||||||||    
T  10829659 taaatatcattaatgtggtc 10829640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 5913106 - 5913248
Alignment:
Q  192 accgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcaga 290  Q
    ||||||| | |||||||||| |||||||| | ||||||||||||| |||| |||||||||||| || ||||| | ||||| |||||||||||||||||||    
T  5913106 accgtcccagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcgagttaactcgcacagaggctcaatggtgtgtgacttaagtcacgcaga 5913205  T
Q  291 ggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | ||   |||||||  ||||||||||||| |  ||||||||||    
T  5913206 gcttgtgaggtgcgtgagttaagtcacgcggtgtgacttaact 5913248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 287
Target Start/End: Original strand, 43835138 - 43835411
Alignment:
Q  18 atagagggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtt 114  Q
    |||| ||| ||||||||||||| ||   |||| || ||||||||||| ||||| ||||||| || |   ||||||||||||| ||||||||   || |||    
T  43835138 atagggggggagagtgaggaggagagtgagaatgttagatggtgtgaagaaatggggaagtttgcaaaggtatttataggtgagaatggtaacatatgtt 43835237  T
Q  115 ataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaa-cgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttc 213  Q
     |||| || |||||||| ||        ||||||||  ||||| |||| ||||| || | |||||||||||||| ||||||||||||||||||| |||||    
T  43835238 ttaactacaataaatgtagtaaaaaaaacgtgtaaaacttgtaaaaaatcgtgtagaatcaaggttgaaaacctaaccaccgtccaaaaaacgtgtgttc 43835337  T
Q  214 ttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgc 287  Q
    || || || | | |||| ||||| | | ||| |||||||||||| || |  |||||||||||||||||||||||    
T  43835338 ttgagctcaggctaccgaccaacctacatgaattaactcgcgcacagaccggtggtgcgtgacttaagtcacgc 43835411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 187 - 394
Target Start/End: Complemental strand, 1217893 - 1217685
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||| | ||||||||||  ||||||| | ||||||||||||| ||||  ||| |||||||||| |||||  |||||||||||||||||||||    
T  1217893 tgaccaccgtcccagaaacgtttgtgtttcagtttttaccaccggccaacttgcgcaagtcaactcgcgcagaggctcggtggtgcgtgacttaagtcac 1217794  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgag 385  Q
     || || ||   |||||||  |||||||||||||| | ||||||||||  | || ||  || ||||  |    |||||||||||| | ||||||||||||    
T  1217793 acaaagcttgtgaggtgcgtgagttaagtcacgcaacgtgacttaactcacacagggttatatttggaaaacatgcagggcgcgagcgaaatgtgctgag 1217694  T
Q  386 tgaagagca 394  Q
    |||||||||    
T  1217693 tgaagagca 1217685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 2766848 - 2766914
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcg 253  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||    
T  2766848 tgaccaccgtccaaaaaacgtttgttcttcagttttgaccactggccaacttgcgtgcgttaactcg 2766914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 4759208 - 4759346
Alignment:
Q  202 aaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcagaggttacaagg 300  Q
    |||||||||| |||||||| | ||||||| ||||| ||||  |||||||||||||| ||||| |||||||| ||||||||||||||||||| ||   |||    
T  4759208 aaacgtttgtgcttcagtttttaccaccgtccaacttgcgcaagttaactcgcgcagaggctcagtggtgcatgacttaagtcacgcagagcttgtgagg 4759307  T
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||   |||||||||||  || ||||||||||| ||||    
T  4759308 tgcgtgtgttaagtcacgttgcgtgacttaacttacgca 4759346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 328 - 401
Target Start/End: Complemental strand, 43692415 - 43692342
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||| |||| | ||||||||||| |||||    
T  43692415 ttaactagcgcaagggcatttttgacatggctgcagggcgcgaacaaaacgtgcagggtgaagagcagtattct 43692342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 35161707 - 35161562
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| |||||| || |||||||||| |||||||| | |||||||| |||| ||||  |||||||||||||||||||| ||||||||||||| ||||||||    
T  35161707 tgactaccgtctaagaaacgtttgtgcttcagtttt-accaccggtcaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgac-taagtcac 35161610  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||| ||   ||||| |   |||||||| ||| |||||||||||||    
T  35161609 gcagagcttgtgaggtgggtgtgttaagtctcgctgcatgacttaact 35161562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 42182762 - 42182615
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||  ||| |||||||||||| |||||||| | ||||||||||||| ||||  |||||||||||| | || || |||||||||||||||| |||||    
T  42182762 tgaccactatcccaaaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgtagagactcagtggtgcgtgacttaggtcac 42182663  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | |||| ||   || ||||  |||||||||||||||  ||||||||||    
T  42182662 gtagagcttgtgagatgcgtgagttaagtcacgcagtgtgacttaact 42182615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 9039767 - 9039620
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||| ||||| |||||||||| ||  |||| | ||||||||||||| ||||  |||||||||||||| ||| | ||||||| ||||||||||||||    
T  9039767 tgactaccatccaagaaacgtttgtgctgtagtttttaccaccggccaacttgcgcaagttaactcgcgcagaggttcagtggtgtgtgacttaagtcac 9039668  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    ||| |||||   |||||||  ||||||| ||||| || || |||||||    
T  9039667 gcaaaggttgtgaggtgcgtgagttaaggcacgctgcgtggcttaact 9039620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 4322788 - 4322694
Alignment:
Q  197 ccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcaga 290  Q
    |||| |||| ||||| |||||||| | |||||||| |||| ||||  |||||||||||||||||||| ||||||||||||| ||||| |||||||    
T  4322788 ccaagaaacatttgtgcttcagtttttaccaccggtcaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacctaagttacgcaga 4322694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 3964100 - 3964008
Alignment:
Q  196 tccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcag 289  Q
    |||||||||| | ||||||| || ||| ||||||||||||| |||||||||||||||||| | || | |||| |||||||||||| ||||||||    
T  3964100 tccaaaaaacatgtgttcttgagctctaaccaccggccaacttgcgtgagttaactcgcggacagac-agtgatgcgtgacttaattcacgcag 3964008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 15743234 - 15743321
Alignment:
Q  247 taactcgcgcataggct-agtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||   |||||||  |||||||||  || || ||||||||||    
T  15743234 taactcgcgcataggctcagtggtgcgtgacttaagtcacgcagagcttgtgaggtgcgtgagttaagtcttgctgcgtgacttaact 15743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 3964249 - 3964184
Alignment:
Q  32 tgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgg 97  Q
    |||||||||  |||| ||||||||||||||||||||  |||||| |||||| ||||||||||||||    
T  3964249 tgaggagggtgagaatgtgagatggtgtgaggaaatgaggaagtttggaggggtatttataggtgg 3964184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 6253996 - 6253936
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtat 77  Q
    |||||||||||||||||||| ||||  ||||| ||| |||||||||||||||||||||||||    
T  6253996 aaatagagggagagagtgag-agggagagaaaatgatatggtgtgaggaaatagggaagtat 6253936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 20520480 - 20520413
Alignment:
Q  275 acttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagg 342  Q
    |||||||||||||| |||   ||| ||||||| |||||||||| |||| |||||||||||||||||||    
T  20520480 acttaagtcacgcataggactcaacgtgcgcatgttaagtcacacagcgtgacttaacttgcgcaagg 20520413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 354 - 395
Target Start/End: Complemental strand, 37227033 - 37226992
Alignment:
Q  354 atggctgcagggcgcgatcaaaatgtgctgagtgaagagcag 395  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  37227033 atggctgcagggcgcgagcaaaatgtgctgggtgaagagcag 37226992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 39046680 - 39046611
Alignment:
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcga 370  Q
    |||| ||||||||||| ||||| |||||||||||| ||| ||| ||||| | |||||||||||| |||||    
T  39046680 tgcgtaagttaagtcatgcagcgtgacttaacttgtgcaggggtattttcgtcatggctgcaggacgcga 39046611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 43636605 - 43636531
Alignment:
Q  23 gggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatagg 94  Q
    ||||||||||||||||| ||   |||| |||||||||||||||||||  ||||||| | |||| |||||||||||    
T  43636605 gggagagagtgaggaggagagtgagaatgtgagatggtgtgaggaaaaggggaagtttagaggtgtatttatagg 43636531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 4639914 - 4639835
Alignment:
Q  148 aaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgacca 227  Q
    ||||| |||| ||||||| |||||| |  |||||||| |||| ||| | ||||||||| ||||||||||| |||||||||    
T  4639914 aaagtgtgtaaaaaacgtatggattaactgttgaaaaactgatcacagaccaaaaaacatttgttcttcaattctgacca 4639835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 15739697 - 15739755
Alignment:
Q  192 accgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaac 250  Q
    ||||||||| |||||||||| |||||||| | ||||||||||||| ||||  |||||||    
T  15739697 accgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaac 15739755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 34471730 - 34471692
Alignment:
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  34471730 tgcgcaagttaagtcacgctgcgtgacttaacttgcgca 34471692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 4322625 - 4322589
Alignment:
Q  359 tgcagggcgcgatcaaaatgtgctgagtgaagagcag 395  Q
    |||||||||||| |||||||||| |||||||||||||    
T  4322625 tgcagggcgcgagcaaaatgtgcagagtgaagagcag 4322589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 356 - 400
Target Start/End: Complemental strand, 4412641 - 4412597
Alignment:
Q  356 ggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    ||||||||||||||| |||||||||||| || |||||||| ||||    
T  4412641 ggctgcagggcgcgagcaaaatgtgctgggtaaagagcagaattc 4412597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 20669802 - 20669842
Alignment:
Q  303 cgcaagttaagtcacgcagcatgacttaacttgcgcaaggg 343  Q
    |||| ||||||||||||||| ||||||||||||| ||||||    
T  20669802 cgcatgttaagtcacgcagcgtgacttaacttgcacaaggg 20669842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 400
Target Start/End: Complemental strand, 38131707 - 38131326
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtta 115  Q
    ||||||||||||||||||||||||   |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  38131707 aaatagagggagagagtgaggagg---agaaagtgagatggtgtgagaaaataggtaagtatggaggagtatttataggtggaaatgatagtgtaggtta 38131611  T
Q  116 taaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttctt 215  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  38131610 taaccaccataaatgtggtcaaaaaaacgtgtaaagtttgtagaaaacgtgtgggttgaaggtcgaaaacctgaccaccgtccaaaaaacgtttgttctt 38131511  T
Q  216 cagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtc 315  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  38131510 cagttgtgaccaccggctaacgtgcgtgagttaactcgtgcataggcccgtggtgcgtgacttaagtcacacagaggttagaaggtgcgcaagttaagtc 38131411  T
Q  316 acgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    | ||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||| |||||    
T  38131410 atgcagcgtgacttaacttgcgcaagggcatttttggcatggctgcagggcgcgagcaaaatgtgctgggtgaagagcaacattc 38131326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 12 - 403
Target Start/End: Original strand, 21712976 - 21713367
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| ||||||| |||||||||||| ||| |||| ||||||||||||| ||||| |||    
T  21712976 agagaaatagagggagagagtgaggaggaggagaaagtgagatggtttgaggaattagggaagtatgaaggggtatatataggtgggaattgtagtatag 21713075  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt---agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtt 208  Q
    ||| |||  ||||| |||||||||       |||||||| ||||    | |||||||||||| |||| |||| ||| |||| ||  | ||||||||||||    
T  21713076 gttgtaaataccattaatgtggtcaaaa---cgtgtaaaatttggtaaaaaaaacgtgtggaatgaatgttggaaaactgatcaaggaccaaaaaacgtt 21713172  T
Q  209 tgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaag 308  Q
    |||||||||| |||||||||||||||   |||||||||||||||| |||||||| | |||||||||||||||| |||||| || ||| ||||||||| ||    
T  21713173 tgttcttcagctctgaccaccggccatgttgcgtgagttaactcgtgcataggccattggtgcgtgacttaagccacgcatagattataaggtgcgctag 21713272  T
Q  309 ttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattcttt 403  Q
    |||| |||||| || |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||| |||||||    
T  21713273 ttaaatcacgctgcgtgacttaactagcgcaagggcatttttggcatggctgcagggcgcgagcaaaatgtgcagggtgaagagcagaattcttt 21713367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 12 - 390
Target Start/End: Original strand, 49065357 - 49065740
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||| | | |||| |||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||| |||    
T  49065357 agagaaatagagggagagagtgaggacgaggagaatgtgagatggtgtgaggaattagggaagtatggaagggtatttataggtgggaatggtagtatag 49065456  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt-----agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaa-aac 205  Q
    ||| |||  | ||| |||||||||       | |||||| ||||      | |||||||||||| |||| |||| ||| || | ||  | |||||| |||    
T  49065457 gttgtaaatatcattaatgtggtcaaaaaa-catgtaaaatttggttaaaaaaaaacgtgtggaatgaatgttggaaaactaatcaaggaccaaaaaaac 49065555  T
Q  206 gtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgc 305  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||    
T  49065556 gtttgttcttcagctctgaccaccggccaaggtgcgtgagttaactcgcgcataggccagtggtgcgtgacttaagtcacgcatagtttataaggtgcgc 49065655  T
Q  306 aagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaag 390  Q
     |||||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||    
T  49065656 tagttaagtcacgcaacgtgacttaactagcgcaagggcatttttggcatggctgcagggcgcgagcaaaatgtgcagggtgaag 49065740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 12 - 333
Target Start/End: Complemental strand, 42039295 - 42038969
Alignment:
Q  12 agagaaatagagggagagagtga---ggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtg 108  Q
    |||||||||||||||||||||||   ||||||  ||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||| ||||||||    
T  42039295 agagaaatagagggagagagtgatgaggagggagagaaagtgatatggtgtgaggaaatagagaagtatggatgggtatttataggtgggactggtagtg 42039196  T
Q  109 taggttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaa--cgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacg 206  Q
    ||||||||||||||||||||||||||        |||||||||| |||| ||||  |||||||||||||| |||||||||||| ||||||||||||||||    
T  42039195 taggttataaccaccataaatgtggtaaaaaaaacgtgtaaagtatgtaaaaaaaacgtgtggattgaagattgaaaacctgaacaccgtccaaaaaacg 42039096  T
Q  207 tttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgca 306  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||   |||||  |||| |||||| ||     
T  42039095 tctgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcacaggccagtggtgcgtgacataaggtgcgcagttgttataaggtgtgct 42038996  T
Q  307 agttaagtcacgcagcatgacttaact 333  Q
     |||| ||||||| || ||||||||||    
T  42038995 ggttaggtcacgctgcgtgacttaact 42038969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 108 - 401
Target Start/End: Original strand, 27761024 - 27761330
Alignment:
Q  108 gtaggttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaa------ 201  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||          
T  27761024 gtaggttataaccaccataaatgtggtcaaaaaa-cgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaatctgaccatcgtccaaaaaacgt 27761122  T
Q  202 --------aaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggt 293  Q
            |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27761123 ttgtcaaaaaacgtttgttcttgagttctgactaccggccaacgtgtgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagagat 27761222  T
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagc 393  Q
    || ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||  |||||||| || ||||||||     
T  27761223 tataaggtgcgcaaattaaatcacgcagcgtgacttaacttgcgcaagggcatttttgacatggctgcatagcgcgagtaaaatgtgttgggtgaagagg 27761322  T
Q  394 agcattct 401  Q
    ||||||||    
T  27761323 agcattct 27761330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 14 - 289
Target Start/End: Complemental strand, 32935960 - 32935683
Alignment:
Q  14 agaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggt 113  Q
    |||||||||||||||||||| ||||||| ||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  32935960 agaaatagagggagagagtggggagggggagaaagtgatatgatgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtataggt 32935861  T
Q  114 tataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaa--cgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    ||||| |||||| |||||||||       |||||| | ||  || ||||  ||||| ||||||| |||||||| |||||||  | |||||||||||||||    
T  32935860 tataaacaccattaatgtggtcaaaaaaacgtgtataattgataaaaaaaacgtgtagattgaatgttgaaaaactgaccaaagaccaaaaaacgtttgt 32935761  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcag 289  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  32935760 tcttcagctctggccaccggccaacgtgcgtgagttaactcgcgcataggcaagtggtgcgtgacttaactaacgcag 32935683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 31823225 - 31823039
Alignment:
Q  72 aagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggat 171  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||||| ||||| ||||||||||||||    
T  31823225 aagtatggaggggtatttataggtgggaatgatagtgtaggttataaccaccataaatgtggtcaaaaaaacgtgtaaaatttgttgaaaacgtgtggat 31823126  T
Q  172 tgaa-ggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgca 257  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31823125 tgaaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcacgca 31823039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 13 - 285
Target Start/End: Original strand, 1227749 - 1228023
Alignment:
Q  13 gagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtagg 112  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||||| ||| |||||||||||||| |||| |||| ||||    
T  1227749 gagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagagaagtatgaaggggtatttataggtggaaatgatagtatagg 1227848  T
Q  113 ttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    || ||| |||||| |||||||||       |||||||| |  |||| ||||||||||||||||  |||||||| |||||||| | |||||||||||||||    
T  1227849 ttgtaaacaccattaatgtggtcaaaaaaacgtgtaaaatagtgtaaaaaacgtgtggattgagtgttgaaaaactgaccacagaccaaaaaacgtttgt 1227948  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||||||||||||||||  | ||||||||||||| ||  ||||| | ||||| ||||||||||||||    
T  1227949 tcttcagttctgaccaccggccaactagtgtgagttaactcgtgctaaggctcaatggtgggtgacttaagtcac 1228023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 12 - 285
Target Start/End: Original strand, 31936135 - 31936407
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||||||| || || |||||||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||| | |||    
T  31936135 agagaaatagagggagagagtgagggggaga-gaaagtgatatgctgtgaggaaatagggaagtatggaggggtatttataggtgagaatggtaatatag 31936233  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt-agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    |||||||| ||||||||||||| |       |||||||| || || | ||||||||| |||| ||||||||||||||||| | ||| |||||||||| ||    
T  31936234 gttataactaccataaatgtggacaaaaaaacgtgtaaacttggtaaaaaaacgtgtagatt-aaggttgaaaacctgactatcgttcaaaaaacgtgtg 31936332  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcac 285  Q
    || || || || ||||| |||||||| |||||||||||||||||||  |||| ||||||||||||||||||||||    
T  31936333 tttttgagctcagaccatcggccaacctgcgtgagttaactcgcgcccaggccagtggtgcgtgacttaagtcac 31936407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 47043630 - 47043868
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  47043630 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 47043729  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||||||       |||||||| |  |||  ||||||||||||||||| ||||||||  ||||||| | ||||||||||||||    
T  47043730 gttgtaaacaccattaatgtggtc-aaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaattgaccacagaccaaaaaacgtttg 47043828  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||||||||||  |||||||||||  ||| ||||||||||    
T  47043829 ttcttcagttctg--caccggccaactggcgcgagttaactc 47043868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 12 - 333
Target Start/End: Complemental strand, 2778231 - 2777929
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| |||    
T  2778231 agagaaatagagggagagagtgaggagggagagaaaatgatatggtgtgaggaaatagggaagtatgaaggggtatttgtaggtgggaatggtagtatag 2778132  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtcca-aaaaacgtttg 210  Q
    |||||||| |||||||||||||||            |||        |||||| || ||||||||||||||||  | |||||| |||| |||||||||||    
T  2778131 gttataactaccataaatgtggtc------------aaa--------aaaacgcgtagattgaaggttgaaaaggttaccaccatccacaaaaacgtttg 2778052  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtt 310  Q
    || || ||  | |||||||||||||| |||||||||||||||||||| |||| ||||| | ||||||||||| |||||||  ||| ||||||||  ||||    
T  2778051 ttattgaggacagaccaccggccaacttgcgtgagttaactcgcgcacaggccagtggcgtgtgacttaagttacgcagaacttataaggtgcgtgagtt 2777952  T
Q  311 aagtcacgcagcatgacttaact 333  Q
    ||||||||| || ||||||||||    
T  2777951 aagtcacgctgcgtgacttaact 2777929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 46814288 - 46814051
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||    
T  46814288 agagaaatagagggagagagtgaggagggggagaaaatgatatggtgtgaggaattagagaagtatggaggggtatttataggtgggaatggtagtatag 46814189  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||||||       |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | |||||||| |||||    
T  46814188 gttgtaaacaccattaatgtggtc--aaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaatgtttg 46814091  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||||| ||||  |||||| ||||  ||||||||||||||    
T  46814090 ttcttcagctctg--caccgggcaactagcgtgagttaactc 46814051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 886840 - 887079
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  886840 agagaaatagagggagagagtgatgagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 886939  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtc-caaaaaacgttt 209  Q
     || ||| |||||| |||||||||       |||||||| |  |||  |||||||||| |||||| |||||||| |||||||| | |  |||||| ||||    
T  886940 tttgtaaacaccattaatgtggtc-aaaaaacgtgtaaaatagtgttaaaaacgtgtgaattgaatgttgaaaaactgaccacagactaaaaaaatgttt 887038  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||||| ||   ||||||||||  ||||||||||||||    
T  887039 gttcttcagttatg--taccggccaactagcgtgagttaactc 887079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 14329261 - 14329020
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||| |||| |||||||||||||||||||||||| |      
T  14329261 agagaaatagagggagagagtggggaggggcagaaagtgagatggtgtgaggaattatggaagtatagaggggtatttataggtgggaatggtagtatga 14329162  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttg--tagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||| ||| |||||| |||||||||       |||||||| ||||   | ||||| |||||| |||| ||||||||||||| ||  | |||||||| ||||    
T  14329161 gttgtaaacaccattaatgtggtc-aaaaaacgtgtaaaatttggtaaaaaaacatgtggaatgaatgttgaaaacctgatcaaagaccaaaaaatgttt 14329063  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||| ||||| ||||||||||  |||| || |||||||||||||    
T  14329062 gtttttcagctctgaccaccaaccaaggtacgtgagttaactc 14329020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 36174220 - 36174459
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| || || ||||||||||||| |||||||||||||||||||||||| |||    
T  36174220 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgagaaattatggaagtatggaggggtatttataggtgggaatggtagtatag 36174319  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||  |        | |||||| |  |||  |||||||||||||| || |||||||| |||||||| | |||||||||||||     
T  36174320 gttgtaaacaccattaatgtaataaaaaaaacatgtaaaatagtgttaaaaacgtgtggattaaatgttgaaaaactgaccacagaccaaaaaacgtttc 36174419  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||||||||||  |||| ||||||  | ||||||||||||    
T  36174420 ttcttcagttctg--cacctgccaactagtgtgagttaactc 36174459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 199 - 370
Target Start/End: Original strand, 9242917 - 9243088
Alignment:
Q  199 aaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcagaggttaca 297  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||||||||||| ||| |    
T  9242917 aaaaaacgtttgttcttcagttctgactaccggccaacttgcgtgagttaactcgcgga-aggctcagtggtgcgtgacttaagtcacgcagagattata 9243015  T
Q  298 aggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcga 370  Q
    ||||| |  |||||||||||| ||  ||||||||||  |||| ||||||||| | ||||| ||||||||||||    
T  9243016 aggtgtgtgagttaagtcacgtagtgtgacttaactcacgcacgggcattttaggcatggttgcagggcgcga 9243088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 28797059 - 28796819
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaag--tatggaggagtatttataggtgggaatggtagtgt 109  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||  |||||||| |||||||||||||| ||||||||| |    
T  28797059 agagaaataaagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatatggaggggtatttataggtggaaatggtagtat 28796960  T
Q  110 aggttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtt 208  Q
    ||||| ||| |||||| |||||||||        ||||||| |  |||  ||||||||||||||||| |||||||| ||||||||   |||||||| |||    
T  28796959 aggttgtaaacaccattaatgtggtcaaaaaat-gtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacataccaaaaaatgtt 28796861  T
Q  209 tgttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||||||||||||  |||||| ||||  ||| ||||||||||    
T  28796860 tgttcttcagttctg--caccggtcaactggcgcgagttaactc 28796819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 33162067 - 33161827
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||| |||||||||||||| |||||||||| | ||||||| |||||||||| || ||| |||||||||||| ||||||||||||| ||| |||||| |||    
T  33162067 agagcaatagagggagagattgaggaggggtaaaaagtgatatggtgtgagaaattagagaagtatggaggggtatttataggtgagaaaggtagtatag 33161968  T
Q  112 gttataaccaccataaatgtggtcnnnnnnn-cgtgtaaagtt-tgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||| ||| |||||| ||| ||||         |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | |||||||||||||    
T  33161967 gttgtaaacaccattaatatggtaaacaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgttt 33161868  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||||||||  |||||||||||  ||||||||||||||    
T  33161867 gttcttcagttctg--caccggccaactagcgtgagttaactc 33161827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 43 - 207
Target Start/End: Complemental strand, 46567506 - 46567339
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnn 142  Q
    |||| |||| ||||||||||||||||  |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||           
T  46567506 agaacgtgatatggtgtgaggaaatattgaagtatggaggggtatttataagtggaaatggtagtgtaggttataaccaccataaatgtggtcaaaaaaa 46567407  T
Q  143 cgtgtaaagttt---gtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgt 207  Q
    ||||||||| ||     | |||| |||| ||||||  |||||||||||||||||||||||||||||||    
T  46567406 cgtgtaaaggttacaaaaaaaaatgtgtagattgagtgttgaaaacctgaccaccgtccaaaaaacgt 46567339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 53266207 - 53266085
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||| ||| || ||||||| || |||||||||||| ||| |||||||||||||||||||||||| |||    
T  53266207 agagaaatagagggagagagtgaggagggggagaaa-tgatatagtgtgagaaattagggaagtatgaaggggtatttataggtgggaatggtagtatag 53266109  T
Q  112 gttataaccaccataaatgtggtc 135  Q
    ||| ||| |||||| |||||||||    
T  53266108 gttgtaaacaccattaatgtggtc 53266085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 268 - 400
Target Start/End: Complemental strand, 31823059 - 31822927
Alignment:
Q  268 gtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcg 367  Q
    |||||||| |||| ||||||| || ||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||| |||||||||||| ||    
T  31823059 gtgcgtgagttaactcacgcaaagcttataaggtgcgcaagttaagtcacacagcgtggcttaacttgcgcaagggcatttttggcatggctgcaggacg 31822960  T
Q  368 cgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||  ||||| ||||  || |||||||||||||    
T  31822959 cgagtaaaatatgctcggttaagagcagcattc 31822927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 48 - 288
Target Start/End: Original strand, 14990156 - 14990395
Alignment:
Q  48 gtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnncgtgt 147  Q
    ||||||||||||| | |||| ||||||| |||||| ||||||||| ||| |||||||||| ||||||| ||| ||||||||||| |||       |||||    
T  14990156 gtgagatggtgtgggaaaatggggaagtttggaggggtatttataagtgagaatggtagtataggtta-aactaccataaatgtagtcaaaaaa-cgtgt 14990253  T
Q  148 aaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgacc-accggccaacgtgcgtgagt 246  Q
    |||  |||||  |||||||| ||||||||||| |||| |||||||  ||||||||||||| |||| || || ||| ||| |||||||||| |||||||||    
T  14990254 aaaagttgtaagaaacgtgtagattgaaggttaaaaagctgaccaaagtccaaaaaacgtgtgttttttagctctaaccaaccggccaacctgcgtgagt 14990353  T
Q  247 taactcgcgcataggctagtggtgcgtgacttaagtcacgca 288  Q
    ||| ||| |||  |||||  || || ||||||||||||||||    
T  14990354 taattcgtgcaccggctaaaggagcatgacttaagtcacgca 14990395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 42119076 - 42118929
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||| |||||||||||| |||||||| | ||||||||||||| ||||  |||||||||||| | ||||| ||||||||||||||||||||||    
T  42119076 tgaccaccgtcccaaaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgtagaggctcagtggtgcgtgacttaagtcac 42118977  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||  ||   ||||| |  |||||||||||||||| ||||||||||    
T  42118976 gcagaacttgtgaggtgtgtgagttaagtcacgcagcgtgacttaact 42118929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 27760952 - 27761022
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggagg 82  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27760952 agagaaatagagggagagagtgaggagggggagaaagtgagatggtgtgaggaaatagggaagtatggagg 27761022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 43502270 - 43502423
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||||||||| ||||  |||||||||||||||||||| ||||||||| ||||||||||||    
T  43502270 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcgcgacttaagtcac 43502369  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    |||||| ||   ||||||||| ||||| || ||| || | |||||||| |||||    
T  43502370 gcagagcttgtgaggtgcgcatgttaaatctcgctgcgttacttaactcgcgca 43502423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 187 - 394
Target Start/End: Original strand, 34939344 - 34939552
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||| ||| |||||||||| || ||||| | ||||||||||||| ||||  |||||||||||||||||||| |||| |||||||| |||||||     
T  34939344 tgaccaccgttcaagaaacgtttgtgctgcagtttttaccaccggccaacttgcggaagttaactcgcgcataggctcagtgttgcgtgacataagtcat 34939443  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgag 385  Q
    |||||| ||   |||||||   ||||||||||||  | ||||||||||  |||| || ||| ||||| |    |||||||||||| | ||||||||||||    
T  34939444 gcagagcttgtgaggtgcgtgtgttaagtcacgctacgtgacttaactcacgcagggtcatatttgaaaatcatgcagggcgcgagcgaaatgtgctgag 34939543  T
Q  386 tgaagagca 394  Q
    |||||||||    
T  34939544 tgaagagca 34939552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 174 - 333
Target Start/End: Original strand, 13856035 - 13856193
Alignment:
Q  174 aaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgt 273  Q
    ||||||||||| ||||||||| |||||||||| | ||||||| || || |||||||||||||| |||||||||||||| | |||| ||| |||| |||||    
T  13856035 aaggttgaaaagctgaccaccatccaaaaaacctgtgttcttgagctcagaccaccggccaacctgcgtgagttaacttgtgcatcggccagtgatgcgt 13856134  T
Q  274 gacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||||||||||| || | ||  |||||    |||||||||||||||| ||||||||||    
T  13856135 gacttaagtcacgctga-gctattaggtggatgagttaagtcacgcagcgtgacttaact 13856193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 192 - 402
Target Start/End: Complemental strand, 54703734 - 54703523
Alignment:
Q  192 accgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcatagg-ctagtggtgcgtgacttaagtcacgcaga 290  Q
    ||||||||| ||||||||||||||||||| | ||||||| ||||| ||||  ||||||||||| |||||| | ||||||||| |||||||||||||||||    
T  54703734 accgtccaagaaacgtttgttcttcagtttttaccaccgaccaacttgcgcaagttaactcgcacataggcccagtggtgcgcgacttaagtcacgcaga 54703635  T
Q  291 ggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaag 390  Q
    | ||   ||||||| | |||||||| ||| || | ||||||||  |||| ||  || ||||| |    |||||||||||| |||||||||| | ||||||    
T  54703634 gcttgtgaggtgcgtatgttaagtctcgctgcgttacttaactcacgcagggttatatttgaaaaaagtgcagggcgcgagcaaaatgtgcagggtgaag 54703535  T
Q  391 agcagcattctt 402  Q
    ||||| ||||||    
T  54703534 agcagaattctt 54703523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 159 - 280
Target Start/End: Complemental strand, 372824 - 372703
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcat 258  Q
    ||||||||| || | |||||||||||||||| ||||||||||||||||| ||||||| || || |||||||||||||| ||||||  ||||||| ||||     
T  372824 aaaacgtgtagaatcaaggttgaaaacctgatcaccgtccaaaaaacgtgtgttcttgagctcagaccaccggccaacctgcgtggattaactcacgcac 372725  T
Q  259 aggctagtggtgcgtgacttaa 280  Q
    | || |||||||||||||||||    
T  372724 atgccagtggtgcgtgacttaa 372703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 52789497 - 52789392
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||| ||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  52789497 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccgaccaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacttaagtcac 52789398  T
Q  286 gcagag 291  Q
    ||||||    
T  52789397 gcagag 52789392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 16524893 - 16525014
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||| |  |||||||||  ||||||||| ||||||||||||||||| |||||||| | | |||||||||||||| ||||||||| ||     
T  16524893 agagaaatagagggagtg--tgaggagggagagaaagtgatatggtgtgaggaaatagagaagtatgaaagggtatttataggtggaaatggtagtatat 16524990  T
Q  112 gttataaccaccataaatgtggtc 135  Q
    |||||||| | |||||||||||||    
T  16524991 gttataacaatcataaatgtggtc 16525014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 13867633 - 13867733
Alignment:
Q  28 agagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataa 127  Q
    |||||||||||| || ||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||   ||||||||||| || ||||    
T  13867633 agagtgaggaggaga-gaatgtgagatggtgtgaggaaatggggaagtttggaggagtatttataggtgggaatggtaacataggttataactacaataa 13867731  T
Q  128 at 129  Q
    ||    
T  13867732 at 13867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 14289800 - 14289656
Alignment:
Q  197 ccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttac 296  Q
    |||||||| ||||||| ||||| ||||||||||| |||| || | |||||||||||||||||||   ||||||| |||||||||||||| || |  |||     
T  14289800 ccaaaaaatgtttgtttttcagctctgaccaccgaccaaggtacatgagttaactcgcgcatagatcagtggtgtgtgacttaagtcacacatatattat 14289701  T
Q  297 aaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaag 341  Q
    ||||||||| ||||||||||| | |  |||||||||| |||||||    
T  14289700 aaggtgcgctagttaagtcacactgtgtgacttaactagcgcaag 14289656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 174 - 329
Target Start/End: Original strand, 13867757 - 13867910
Alignment:
Q  174 aaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgt 273  Q
    ||||||||||| ||||||||| |||||||||||  |||||||  | || ||||| |||||||| ||||||||||| ||||||||  ||||||||||||||    
T  13867757 aaggttgaaaagctgaccaccatccaaaaaacgcgtgttcttg-gctcagaccatcggccaacttgcgtgagttagctcgcgcaccggctagtggtgcgt 13867855  T
Q  274 gacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgactt 329  Q
    ||||||||||| || || | ||  ||||||   |||||||||||||||| ||||||    
T  13867856 gacttaagtcatgctga-gctattaggtgcatgagttaagtcacgcagcgtgactt 13867910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 37694497 - 37694644
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||| ||||| |||||||| ||| |||||||| | ||||||||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||     
T  37694497 tgaccatcgtcccaaaaacgtctgtgcttcagtttttaccaccggccaacttgcgcaggttaactcgcgtagaggctcagtggtgcgtgacttaagtcat 37694596  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||| ||   |||||||  ||||||||||||| || ||||||||||    
T  37694597 gcagagcttgtgaggtgcgtgagttaagtcacgctgcgtgacttaact 37694644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 18413993 - 18414190
Alignment:
Q  18 atagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttata 117  Q
    |||| |||||||||||||||||  || || |||| ||| |||||| ||||  |||||| ||||||||||| |||||||||||||| ||   |||||||||    
T  18413993 atagggggagagagtgaggaggaaaa-aatgtgaaatgatgtgagaaaatgaggaagtttggaggagtatatataggtgggaatgataacataggttata 18414091  T
Q  118 accaccataaatgtggt-cnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttctt 215  Q
    || ||||||||||| ||         |||||| |  ||||| ||||||||| | |||||||||||||| |||||||||||||||||||| | |||||||    
T  18414092 actaccataaatgtagtaaaaaaaaacgtgtagaagttgtaaaaaacgtgtagcttgaaggttgaaaagctgaccaccgtccaaaaaacatgtgttctt 18414190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 33985434 - 33985539
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggc-tagtggtgcgtgacttaagtcac 285  Q
    |||||||||||||| |||||||||| |||||||| | || |||||||||| ||||  |||||||||||||| |||| | ||| |||||||||||||||||    
T  33985434 tgaccaccgtccaagaaacgtttgtgcttcagtttttactaccggccaacttgcgcaagttaactcgcgcagaggctttgtgttgcgtgacttaagtcac 33985533  T
Q  286 gcagag 291  Q
    ||||||    
T  33985534 gcagag 33985539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 49261760 - 49261871
Alignment:
Q  178 ttgaaaacctgaccaccgtccaaaaaacgtttgttctt--cagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtga 275  Q
    |||||||||||||||||||||||||||||| |||||||   || || ||||| |||||||| |||||| ||||||| ||||| | |  ||||||||||||    
T  49261760 ttgaaaacctgaccaccgtccaaaaaacgtgtgttcttgagagctcagaccatcggccaacctgcgtgggttaacttgcgcacatgtcagtggtgcgtga 49261859  T
Q  276 cttaagtcacgc 287  Q
    ||||||||||||    
T  49261860 cttaagtcacgc 49261871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 275 - 394
Target Start/End: Original strand, 21058683 - 21058802
Alignment:
Q  275 acttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaa 374  Q
    |||||||||||||| |||   ||| ||||||| ||||||||||||||| |||||||||||||||||||| | ||| ||||  ||||||||||||||||      
T  21058683 acttaagtcacgcataggactcaacgtgcgcatgttaagtcacgcagcgtgacttaacttgcgcaagggtaatttggacaatgctgcagggcgcgatcgt 21058782  T
Q  375 aatgtgctgagtgaagagca 394  Q
      ||||||| ||||||||||    
T  21058783 tttgtgctgggtgaagagca 21058802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 51242912 - 51242813
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| |||||||||||||||||| | |||||||| ||||||||||||||| ||||  |||||||||||||||||||| ||||||| || || ||||||||    
T  51242912 tgactaccgtccaaaaaacgtttatgcttcagttttgaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgtgtcacataagtcac 51242813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 12572656 - 12572565
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||||||||||| ||| |||| | |||||| | |||||||||||||||||||||||||||  |||||||||||  ||||||||||||||    
T  12572656 aaaacgtgtggattgaatgttaaaaaacagaccacagaccaaaaaacgtttgttcttcagttctg--caccggccaactggcgtgagttaactc 12572565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 24608148 - 24608286
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggtt 294  Q
    ||||||||| ||| |||| || || ||| ||||||||||||| |||||||||||||||||||| |  | |||| |||||||||||| |||| || || ||    
T  24608148 gtccaaaaagcgtgtgtttttgagctctaaccaccggccaacttgcgtgagttaactcgcgcacataccagtgatgcgtgacttaactcacacaaagatt 24608247  T
Q  295 acaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | ||||||||| ||||||||| ||| || | ||||||||    
T  24608248 ataaggtgcgctagttaagtctcgctgcgtaacttaact 24608286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 328 - 400
Target Start/End: Original strand, 31825856 - 31825928
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||| ||||    
T  31825856 ttaactagcgcaagggcatttttggcatggctgcagggcgcgagcaaaatgtgcagggtgaagagcagaattc 31825928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 40962687 - 40962782
Alignment:
Q  195 gtccaaaaaacgtttgttcttcagttctgacca-ccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcag 289  Q
    ||||||||||||| | ||||| || |||||||| ||||||||| |||||||||||||||| ||| | || ||||||| ||||||||| ||||||||    
T  40962687 gtccaaaaaacgtgtattcttgagctctgaccaaccggccaacctgcgtgagttaactcgtgcaaatgccagtggtgtgtgacttaactcacgcag 40962782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 54808989 - 54809088
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| ||| ||||||  ||||||| | ||||||||||||| ||||  |||||||||||||||||||| ||||||| | ||||||||||||    
T  54808989 tgactaccgtccaagaaatgtttgtggttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgtgcgacttaagtcac 54809088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 21710772 - 21710698
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattctt 402  Q
    |||||| |||||||| |||||||| |||||||||||||| ||| |||||||||| | ||||||||||| ||||||    
T  21710772 ttaactagcgcaaggacatttttggcatggctgcagggcacgagcaaaatgtgcagggtgaagagcagtattctt 21710698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 53266081 - 53265990
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||||||| |||||| ||||||||  ||| |||   |||||||||||||||||||||||||||  |||||||||||  ||||||||||||||    
T  53266081 aaaacgtgtgaattgaatgttgaaaaaatgatcacaaaccaaaaaacgtttgttcttcagttctg--caccggccaactagcgtgagttaactc 53265990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 372946 - 372831
Alignment:
Q  18 atagagggagagagtgaggaggggaa-gaaa--gtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtt 114  Q
    |||| ||||||||||||||| | ||| ||||  ||||||||||||||| |||| ||||||| |||||| | ||||||||||||||||||||   || |||    
T  372946 atagggggagagagtgaggaagtgaatgaaaatgtgagatggtgtgagaaaatggggaagtttggaggggaatttataggtgggaatggtaacatatgtt 372847  T
Q  115 ataaccaccataaatg 130  Q
    ||||| || |||||||    
T  372846 ataactacaataaatg 372831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 40221191 - 40221103
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgt 131  Q
    |||| ||||||||||||||||||||  |||||| |||||| | ||||| ||||||||||||||   ||||||||||  |||||||||||    
T  40221191 agaatgtgagatggtgtgaggaaatgaggaagtttggaggggcatttacaggtgggaatggtaacataggttataaataccataaatgt 40221103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 13855911 - 13856001
Alignment:
Q  28 agagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataac 119  Q
    |||||||||||| || ||| ||||||||||||||||||||  |||| | ||||||  |||||||||||||||||||||   |||||||||||    
T  13855911 agagtgaggaggaga-gaatgtgagatggtgtgaggaaatgaggaattttggagggatatttataggtgggaatggtaacataggttataac 13856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 47020152 - 47020065
Alignment:
Q  202 aaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgca 288  Q
    |||||||| | |||||||| | ||||||| ||||| ||||  |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  47020152 aaacgtttttgcttcagtttttaccaccgtccaacttgcgcaagttaactcgcgcagaggctcagtggtgcgtgacttaactcacgca 47020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 282
Target Start/End: Original strand, 45042996 - 45043090
Alignment:
Q  189 accaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagt 282  Q
    |||||||||| |||||||||||| |||||||| | ||||||||||||| | ||  ||||||||| |  | ||||| |||||||||||||||||||    
T  45042996 accaccgtcccaaaaacgtttgtgcttcagtttttaccaccggccaacttacgcaagttaactcacatagaggctcagtggtgcgtgacttaagt 45043090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 49063212 - 49063138
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattctt 402  Q
    |||||||||||||||| ||||||| || |||||||||| |||| |||||||||| |  |||||||||| ||||||    
T  49063212 ttaacttgcgcaagggtatttttggcacggctgcagggtgcgagcaaaatgtgcaggttgaagagcagtattctt 49063138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 52032689 - 52032763
Alignment:
Q  189 accaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct 263  Q
    |||||||||| |||||||||||| ||| |||| | ||||||||||||  ||||  ||||||||||||||||||||    
T  52032689 accaccgtcccaaaaacgtttgtgctttagtttttaccaccggccaatttgcgcaagttaactcgcgcataggct 52032763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 850627 - 850672
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||    
T  850627 tacaacgtgcgcaagttaagacacgcagcatgacttaacttgcgca 850672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 27758870 - 27758822
Alignment:
Q  331 acttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgt 379  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  27758870 acttgcgcaaggacatttttggcatggctgcagggcgcgagcaaaatgt 27758822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 32938859 - 32938918
Alignment:
Q  326 acttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgag 385  Q
    ||||||| |||||||||||||||||| ||||||||||||| || | | ||||||||||||    
T  32938859 acttaacctgcgcaagggcatttttggcatggctgcagggtgcaagcgaaatgtgctgag 32938918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 49261601 - 49261682
Alignment:
Q  23 gggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaat 101  Q
    ||||||||||||||||| ||   |||| |||||||| |||||||||||  |||||| ||||||  |||||||||||||||||    
T  49261601 gggagagagtgaggaggagagtgagaatgtgagatgatgtgaggaaatgaggaagtttggagggatatttataggtgggaat 49261682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 370
Target Start/End: Original strand, 9958174 - 9958272
Alignment:
Q  272 gtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcga 370  Q
    ||||||||||||||||| |   ||||| |||||  ||||||||||||| || ||||||||||  ||||| || | ||| | ||||||||||||||||||    
T  9958174 gtgacttaagtcacgcataaaatacaacgtgcgttagttaagtcacgctgcgtgacttaactaacgcaatggtaatttaggcatggctgcagggcgcga 9958272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 25146980 - 25146874
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagc 393  Q
    ||||| |||||||||||||| ||||  || | |||||||||||||| ||| | ||| | ||  |||||||||||||| | ||| ||| || |||||||||    
T  25146980 tacaacgtgcgcaagttaagacacgttgcgtaacttaacttgcgcaggggtaatttaggcaacgctgcagggcgcgagcgaaaagtgttgggtgaagagc 25146881  T
Q  394 agcattc 400  Q
    |||||||    
T  25146880 agcattc 25146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 26973406 - 26973304
Alignment:
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||| ||||||||||||||||| |||||||||||| |||| || ||||| | ||||| ||||||  |||| | ||| |||| | ||||||||||  ||||    
T  26973406 tgcgtaagttaagtcacgcagcgtgacttaacttgtgcaatggtattttcgtcatggttgcaggatgcgagcgaaaagtgcagggtgaagagcaaaattc 26973307  T
Q  401 ttt 403  Q
    |||    
T  26973306 ttt 26973304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 38131387 - 38131425
Alignment:
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38131387 tgcgcaagttaagtcacgctgcatgacttaacttgcgca 38131425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 39463138 - 39463072
Alignment:
Q  277 ttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaaggg 343  Q
    |||||||||||| |||   ||| ||||||| ||||||||||||||| | ||||||||||||||||||    
T  39463138 ttaagtcacgcataggactcaacgtgcgcatgttaagtcacgcagcgtaacttaacttgcgcaaggg 39463072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 40962537 - 40962582
Alignment:
Q  47 agtgagatggtgtgaggaaatagggaagtatggaggagtatttata 92  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||||    
T  40962537 agtgagatggtgtgaggaaatggggaagtttggaggtgtatttata 40962582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 401
Target Start/End: Original strand, 157088 - 157172
Alignment:
Q  317 cgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    |||||| | ||||||  |||||||||| || |||||||||||||||| |||||| | |||||||||  | ||||||||| |||||    
T  157088 cgcagcgttacttaaggtgcgcaagggtatatttgacatggctgcagagcgcgagcgaaatgtgcttggggaagagcagaattct 157172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 33983814 - 33983762
Alignment:
Q  342 ggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    |||||||| ||||||||||||||| |||| | |||||||||| ||||||||||    
T  33983814 ggcattttggacatggctgcagggtgcgagcgaaatgtgctgggtgaagagca 33983762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 42563153 - 42563217
Alignment:
Q  275 acttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    |||||||||||||| | | |||||  |||||| ||||| ||||||||| ||||||||||||||||    
T  42563153 acttaagtcacgcataagatacaacatgcgcaggttaaatcacgcagcgtgacttaacttgcgca 42563217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 3394650 - 3394727
Alignment:
Q  23 gggagagagtgaggaggggaa---gaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgg 97  Q
    ||||||||||||||||| ||    ||| ||||||||||||||| ||| | |||||||| |||| ||||||||||||||    
T  3394650 gggagagagtgaggaggagagagggaatgtgagatggtgtgagaaaacaaggaagtattgaggggtatttataggtgg 3394727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 48577401 - 48577508
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagc 393  Q
    ||||| |||||||||||||| ||||  || |||||||||||||||| ||| | ||| ||||  |||||||| || || | |||  ||||| |||||||||    
T  48577401 tacaacgtgcgcaagttaagacacgttgcgtgacttaacttgcgcatgggtaatttagacaacgctgcaggacgtgagcgaaaaatgctgggtgaagagc 48577500  T
Q  394 agcattct 401  Q
    | ||||||    
T  48577501 accattct 48577508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 33163257 - 33163181
Alignment:
Q  21 gagggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatagg 94  Q
    ||||||||||||||||||| ||   | || ||||| |||||||||||||| ||||||| | |||| |||||||||||    
T  33163257 gagggagagagtgaggaggagagtgaaaatgtgagttggtgtgaggaaatggggaagtttagaggtgtatttatagg 33163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 36046100 - 36046039
Alignment:
Q  342 ggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattcttt 403  Q
    |||||||| | |||||||||| || |||| | |||||||||||||||||||||  |||||||    
T  36046100 ggcattttgggcatggctgcaaggtgcgagcgaaatgtgctgagtgaagagcataattcttt 36046039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 36173104 - 36173175
Alignment:
Q  23 gggagagagtgaggaggggaa---gaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttat 91  Q
    ||||||||||||||||| ||    ||| |||||||||||||||||||| ||||||| | |||| ||||||||    
T  36173104 gggagagagtgaggaggagagtgggaatgtgagatggtgtgaggaaatggggaagtttagaggtgtatttat 36173175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 779441 - 779533
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgactt 278  Q
    |||||||||||| |||||||||  | ||||| || | ||||||||||||| ||||  |||||||| ||| | ||||| ||| |||||||||||    
T  779441 tgaccaccgtcccaaaaacgttaatgcttcaatttttaccaccggccaacttgcgcaagttaacttgcgaagaggctcagttgtgcgtgactt 779533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 328 - 400
Target Start/End: Original strand, 38132994 - 38133066
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||||| ||| ||||||||||||| |||| |||||| | |||| |||||||| | | ||||||||||| ||||    
T  38132994 ttaactagcgtaagggcatttttggcatgactgcagagtgcgagcaaaatgtacagggtgaagagcagaattc 38133066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 321 - 401
Target Start/End: Complemental strand, 54185165 - 54185085
Alignment:
Q  321 gcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    |||||| |||||| ||||| ||| |||||||  ||| ||||||||||||| | |||  ||||| ||||||||||| |||||    
T  54185165 gcatgagttaactagcgcaggggtatttttggaatgactgcagggcgcgaacgaaaaatgctgggtgaagagcagaattct 54185085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 12 - 401
Target Start/End: Original strand, 41219186 - 41219575
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  41219186 agagaaatagagggagagagtgagcagggggagaaagtgagatggtgtgagaaaatagggaagtaaggaggggtatttataggtgggaatggtagtgtag 41219285  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    ||||||||||||||||||||||||        |||  |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  41219286 gttataaccaccataaatgtggtcaaaaaaatgtgagaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccatacaaaaaacgtttgt 41219385  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtta 311  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  41219386 tcttcagttctgaccaccagccaacgtgcgtgagttaactcgcgcataggccagtgatgcgtgacttaagtcacgcagaggttataagatgcgcaagtta 41219485  T
Q  312 agtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    | ||||||||  | ||||||||||||||| | ||||||||||||||||||| | ||||| |||||| || || |||||||||| ||||||    
T  41219486 aatcacgcagtgtaacttaacttgcgcaatgacatttttgacatggctgcacgacgcgagcaaaatatgttgggtgaagagcaacattct 41219575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 143 - 401
Target Start/End: Original strand, 18239349 - 18239607
Alignment:
Q  143 cgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgt 242  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  18239349 cgtgtaaaggttgtaaaaaatgtgtggattgaaggttgaaaacctgaccaccgttcaaaaaacgtttgttcttcagttctgaccaccgaccaacgtgcgt 18239448  T
Q  243 gagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagg 342  Q
     ||||||||||||||||||| | || ||||||||||||||||| |||| |||| ||||||  |||||||||||||||||| |||||||||||| ||||||    
T  18239449 tagttaactcgcgcataggccattgatgcgtgacttaagtcacacagatgttataaggtgtacaagttaagtcacgcagcgtgacttaacttgtgcaagg 18239548  T
Q  343 gcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    ||||||||  |||||||||||||| ||| |||||| ||||| |||||||||||||||||    
T  18239549 gcatttttagcatggctgcagggctcgagcaaaatatgctgggtgaagagcagcattct 18239607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 12 - 304
Target Start/End: Original strand, 37523967 - 37524260
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||||||| || ||| |||||||||||| |||||||||||||||||||||||| |||    
T  37523967 agagaaatagagggagagagtaaggagggggagaaagtgatatggtgtgagaaattagagaagtatggaggggtatttataggtgggaatggtagtatag 37524066  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt--agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||| |||  ||||| |||||||||       |||||||| ||||   | |||| |||||||||||| |||||||| |||||||  | |||||||||| ||    
T  37524067 gttttaaataccattaatgtggtcaaaaaa-cgtgtaaaatttggtaaaaaaatgtgtggattgaatgttgaaaaactgaccaaagaccaaaaaacggtt 37524165  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcg 304  Q
    || ||||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||    
T  37524166 gtacttcagttctgaccaccagccaacgtgcgtgaggtaactcgcgcacaggccagtggtgcgtgacttaagtcacgcagagcttataaggtgcg 37524260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 214 - 399
Target Start/End: Original strand, 27874038 - 27874222
Alignment:
Q  214 ttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaag 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| | |||||||||||||||    
T  27874038 ttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggtcagtggtgcgtggcttaagtcacgcagaggttatatggtgcgcaagttaag 27874137  T
Q  314 tcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcatt 399  Q
     |||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||    
T  27874138 ccacgcagcgtgacttaacttgcgcaaggacatttttggcatggctgcaggacgcgagcaaaatgtgctg-gtgaagagcagcatt 27874222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 197 - 402
Target Start/End: Complemental strand, 39476619 - 39476414
Alignment:
Q  197 ccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttac 296  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||     
T  39476619 ccaaaaaacgtttgttcttcagctctgaccaccggccatggtgcgtgagttaactcgcgcataggctaatggtgcgtgacttaagtcacgcatagattat 39476520  T
Q  297 aaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagc 396  Q
    ||||||||| ||||||||||||| |||||||||||||  || |||||||||||| ||||||||||| ||||||| |||||||||| | |||||||||||     
T  39476519 aaggtgcgctagttaagtcacgctgcatgacttaactaacgtaagggcatttttaacatggctgcaaggcgcgagcaaaatgtgcagggtgaagagcaga 39476420  T
Q  397 attctt 402  Q
    ||||||    
T  39476419 attctt 39476414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 1536887 - 1537126
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  1536887 agagaaatagagggagagagtgaggagggggagaaagtgacatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 1536986  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtcc-aaaaaacgttt 209  Q
    ||| ||| |||||| |||||||||       |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | || |||||||||||    
T  1536987 gttgtaaacaccattaatgtggtc-aaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaaacgttt 1537085  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||||||||  ||||||||||   ||| ||||||||||    
T  1537086 gttcttcagttctg--caccggccaattggcgcgagttaactc 1537126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 12 - 333
Target Start/End: Complemental strand, 29714575 - 29714254
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||| ||||||||||||||||||||  ||||||||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||| || |||    
T  29714575 agagaaatcgagggagagagtgaggagggagagaaagtgatatggtgtgaggaaataagaaagtatggaggggtatttataggtgggaatggtggtatag 29714476  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaa---aacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtt 208  Q
    |||||| | |||||| |||| |||       |||||||| || ||| ||   ||||||| ||||||| |||||||| | |||||  ||||||||||  |     
T  29714475 gttatagcaaccatagatgttgtc-aaaaaacgtgtaaacttggtaaaaaataacgtgtagattgaaagttgaaaagcagaccaaagtccaaaaaa--ta 29714379  T
Q  209 tgttcttcagttctgacc-accggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaa 307  Q
    |||| || || ||||||| |||||||||| |||||||||||||||||||  | |  |||||||| |||||||||||||||||| | || ||||||||  |    
T  29714378 tgtttttgagctctgaccaaccggccaacctgcgtgagttaactcgcgcccaagtcagtggtgcatgacttaagtcacgcaga-gctataaggtgcgtga 29714280  T
Q  308 gttaagtcacgcagcatgacttaact 333  Q
     |||||||||||||| ||||||||||    
T  29714279 tttaagtcacgcagcgtgacttaact 29714254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 171 - 333
Target Start/End: Complemental strand, 8260997 - 8260834
Alignment:
Q  171 ttgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggt 269  Q
    ||||| |||||||||| |||||  ||  ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  8260997 ttgaatgttgaaaacccgaccaaagtgaaaaaaacgtttgttcatcagttctgaccaccggccaacttgcgtgagttaactcgcgcaaaggctcagtggt 8260898  T
Q  270 gcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||||||||||||||||||| ||| |||||||   |||||||||||||||| ||||||||||    
T  8260897 gcgtgacttaagtcacgcagagattataaggtgcatgagttaagtcacgcagcgtgacttaact 8260834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 12 - 289
Target Start/End: Complemental strand, 21154032 - 21153753
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||| | | |||||||| ||||   |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||    
T  21154032 agagaaatagatgcacagagtgagaagggagggaaagtgatatggtgtgaggaaatagggaagtatggaggggtatttataggcgggaatggtagtatag 21153933  T
Q  112 gttataaccaccataaatgtggt--cnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    ||||||| ||| || ||||||||          |||||| | |  ||| ||||||||| || |||| || ||||| |||| ||  | ||||||||||| |    
T  21153932 gttataaacacaattaatgtggtaaaaaaaaaacgtgtataatgggtaaaaaacgtgtagactgaatgtggaaaaactgagcaaagaccaaaaaacgtct 21153833  T
Q  210 gttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcag 289  Q
    ||||||||| || ||||||||||| |||||||||||||||||| |||| | || ||||||||||||||||| ||||||||    
T  21153832 gttcttcagctccgaccaccggccgacgtgcgtgagttaactcacgcacatgccagtggtgcgtgacttaactcacgcag 21153753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 48218593 - 48218491
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| |||    
T  48218593 agagaaatagagggagagagtgaggagggggagaaagtgagatggtgtgaggaattagggaagtatggaggggtatttataggtgagaatggtagtatag 48218494  T
Q  112 gtt 114  Q
    |||    
T  48218493 gtt 48218491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 26502087 - 26502314
Alignment:
Q  28 agagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataa 127  Q
    |||||||||||||| ||||| ||| ||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||| |||||| ||| ||| || |    
T  26502087 agagtgaggaggggtagaaaatgatatgttgtgaggaattagggaagtatggaggggtatttataggggggaatggtagtataggttgtaaacacaatta 26502186  T
Q  128 atgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgacc 226  Q
    ||||||||        || |||| |  |||  ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||||  |    
T  26502187 atgtggtcaaaaaaatgtataaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgtttgttcttcagttctg--c 26502284  T
Q  227 accggccaacgtgcgtgagttaactcgcgc 256  Q
     ||||||||   || |||||||||||||||    
T  26502285 cccggccaagtagcatgagttaactcgcgc 26502314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 26590627 - 26590400
Alignment:
Q  28 agagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataa 127  Q
    |||||||||||||| ||||| ||| ||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||| |||||| ||| ||| || |    
T  26590627 agagtgaggaggggtagaaaatgatatgttgtgaggaattagggaagtatggaggggtatttataggggggaatggtagtataggttgtaaacacaatta 26590528  T
Q  128 atgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgacc 226  Q
    ||||||||        || |||| |  |||  ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||||  |    
T  26590527 atgtggtcaaaaaaatgtataaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgtttgttcttcagttctg--c 26590430  T
Q  227 accggccaacgtgcgtgagttaactcgcgc 256  Q
     ||||||||   || |||||||||||||||    
T  26590429 cccggccaagtagcatgagttaactcgcgc 26590400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 31825869 - 31826107
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||| || |||| ||||||||||| |||||||||||||| ||||||||| |||    
T  31825869 agagaaatagagggagaaagtgaggagggggagaaagtgatatggtgtgagaaattaggaaagtatggaggggtatttataggtggaaatggtagtatag 31825968  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||||||       |||||||| |  |||  ||||||||||||||||| |||||||| ||||||||   | |||||| || ||    
T  31825969 gttgtaaacaccattaatgtggtc-aaaaaacgtgtaaaatggtgttaaaaacgtgtggattgaatgttgaaaaactgaccacatacaaaaaaatgtctg 31826067  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||| |||||  |||||| ||||  ||| ||||||||||    
T  31826068 ttcttcaattctg--caccggtcaactggcgcgagttaactc 31826107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 18239238 - 18239336
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgta 110  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18239238 agagaaatagagagagtgagtgaggagggggagaaagtgagatggtgtgaggaaatagggaagtatggaggggtatttataggtgggaatgatagtgta 18239336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 34354224 - 34354347
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| |||    
T  34354224 agagaaatagagggagagagtgataagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgagaatggtagtatag 34354323  T
Q  112 gttataaccaccataaatgtggtc 135  Q
    ||| |||  ||||| |||||||||    
T  34354324 gttgtaaagaccattaatgtggtc 34354347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 16 - 222
Target Start/End: Complemental strand, 38791281 - 38791072
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaat--ggtagtgtaggt 113  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||  |||||||||||| ||||  |||||| |||||    
T  38791281 aaatagagggagggagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggagggatatttataggtgagaattaggtagtataggt 38791182  T
Q  114 tataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtcc-aaaaaacgtttgt 211  Q
    | ||| || ||| ||||||||        |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | || |||||||||||||    
T  38791181 tgtaaacatcattaatgtggt-aaaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaaacgtttgt 38791083  T
Q  212 tcttcagttct 222  Q
    |||||||||||    
T  38791082 tcttcagttct 38791072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 187 - 370
Target Start/End: Original strand, 3742355 - 3742534
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||||||||| ||||  ||||||||| |||||||||| ||||    ||||||||||||||    
T  3742355 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcacgcataggctcagtg----gtgacttaagtcac 3742450  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcga 370  Q
     ||||| ||| || |||||| |||||| |||||| |||||||||||||  ||| ||| ||||||||||| |||||||||||||||    
T  3742451 acagagattataaagtgcgctagttaaatcacgctgcatgacttaactgacgc-aggacatttttgacacggctgcagggcgcga 3742534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 39284091 - 39283944
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||| |||||||||||| |||||||| | ||||||| ||||| ||||  | |||||||||| | ||||| ||||||||||||||||||||||    
T  39284091 tgaccaccgtcccaaaaacgtttgtgcttcagtttttaccaccgaccaacttgcgcaaattaactcgcgtagaggctcagtggtgcgtgacttaagtcac 39283992  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||| |||  |||||||  ||||||| ||||| || ||||||||||    
T  39283991 gcagagcttatgaggtgcgtgagttaagccacgctgcgtgacttaact 39283944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 197 - 304
Target Start/End: Original strand, 34354385 - 34354492
Alignment:
Q  197 ccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttac 296  Q
    ||||||||| |||||||||||   |||| |||| ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||  ||     
T  34354385 ccaaaaaacatttgttcttcaacactgatcaccagccaacgtgtgtgagttaactcgcgcataggccagtggtacgtgacttaagtcacgcagagcatat 34354484  T
Q  297 aaggtgcg 304  Q
    ||||||||    
T  34354485 aaggtgcg 34354492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 187 - 400
Target Start/End: Original strand, 4035137 - 4035351
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| |||||| || |||| ||||| |||||||| | ||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  4035137 tgactaccgtctaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacttaagtcac 4035236  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgag 385  Q
    |||| | ||   ||||||   ||||||||| ||| || ||||||||||  |||| ||  || ||||| |    || ||||||||| |||||||||| | |    
T  4035237 gcagggattgtgaggtgcatgagttaagtctcgctgcgtgacttaactcacgcagggttatatttgaaaaaagtgtagggcgcgagcaaaatgtgcaggg 4035336  T
Q  386 tgaagagcagcattc 400  Q
    |||||||||| ||||    
T  4035337 tgaagagcagaattc 4035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 2913112 - 2913236
Alignment:
Q  6 agaagcagagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggta 105  Q
    ||||| |||||||||| ||||||||| ||||||| || ||| ||||||||||||||| ||||  |||||| ||||||  |||||||||||| ||||||||    
T  2913112 agaagaagagaaatagggggagagagcgaggaggaga-gaatgtgagatggtgtgagaaaatgtggaagtttggagggatatttataggtgagaatggta 2913210  T
Q  106 gtgtaggttataaccaccataaatgt 131  Q
     | ||||||||||| |||||||||||    
T  2913211 atataggttataactaccataaatgt 2913236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 14678406 - 14678298
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||||| |||||||||| || ||||| | ||||||||||||| ||||  ||||||||| | || ||||| ||||||||||||||||||||||    
T  14678406 tgaccaccgtccaagaaacgtttgtgctgcagtttttaccaccggccaacttgcgcaagttaactcacacagaggctcagtggtgcgtgacttaagtcac 14678307  T
Q  286 gcagaggtt 294  Q
    | |||||||    
T  14678306 gtagaggtt 14678298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 187 - 306
Target Start/End: Complemental strand, 37450104 - 37449984
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | |||||||| |||| ||||  |||||||||| ||||||||| |||| |||| ||||||||||||    
T  37450104 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggtcaacttgcgcaagttaactcgtgcataggctcagtgatgcgcgacttaagtcac 37450005  T
Q  286 gcagaggttacaaggtgcgca 306  Q
    ||| || ||| ||||||||||    
T  37450004 gcaaagattataaggtgcgca 37449984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 35126209 - 35126316
Alignment:
Q  174 aaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgt 273  Q
    |||||||||||||| |||||||||||||||| || | ||||| || || |||||| ||||||  | |||||||||||||||||| || | ||| ||||||    
T  35126209 aaggttgaaaacctaaccaccgtccaaaaaatgtgtattcttgagctcagaccactggccaatctacgtgagttaactcgcgcacagaccagttgtgcgt 35126308  T
Q  274 gacttaag 281  Q
    ||||||||    
T  35126309 gacttaag 35126316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 8725880 - 8725726
Alignment:
Q  50 gagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnncgtgtaa 149  Q
    ||||||||||||||||||  | |||| |||||| |||||||||||| |||||| ||   ||||||||||| || |||||||| |||       |||||||    
T  8725880 gagatggtgtgaggaaatgagaaagtttggaggggtatttataggttggaatgataacataggttataactacaataaatgtagtcaaaaaatcgtgtaa 8725781  T
Q  150 agtttgtaga-aaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaa 203  Q
    |  ||||| | |||||||| || ||||||||||||| |||||||||||| |||||    
T  8725780 aacttgtaaagaaacgtgtagaatgaaggttgaaaagctgaccaccgtcaaaaaa 8725726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 48212069 - 48212008
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagtt 220  Q
    ||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  48212069 aaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgtttgttcttcagtt 48212008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 21613112 - 21613032
Alignment:
Q  200 aaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaa 280  Q
    ||||||||  |||||||||||||||||||||| |||  |||||||||||||||||||| | || | |||||||||||||||    
T  21613112 aaaaacgtgagttcttcagttctgaccaccggtcaagctgcgtgagttaactcgcgcacatgccaatggtgcgtgacttaa 21613032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 33803044 - 33802972
Alignment:
Q  187 tgaccaccgtccaaaaaa-cgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcata 259  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| |||| |||| | |||||||||||||||    
T  33803044 tgaccaccgtccaaaaaaacgtttgttcttcagttttgaccaccgg-caacttgcgcgcgttaactcgcgcata 33802972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 38455111 - 38455005
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagc 393  Q
    ||||| |||||||||||||| ||||| || |||||||||||||||| ||||| ||| | ||  ||||| |||||  | | ||| |||||| |||||||||    
T  38455111 tacaacgtgcgcaagttaagacacgctgcgtgacttaacttgcgcaggggcaatttaggcaacgctgccgggcgaaagcgaaaagtgctgggtgaagagc 38455012  T
Q  394 agcattc 400  Q
    |||||||    
T  38455011 agcattc 38455005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 40144784 - 40144869
Alignment:
Q  203 aacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgc 287  Q
    ||||||||| |||||||| | ||||||||||||| ||||   ||||| |||| ||||| || ||||||||||||||||||||||||    
T  40144784 aacgtttgtgcttcagtttttaccaccggccaacttgcgcaggttaagtcgcacatagactcagtggtgcgtgacttaagtcacgc 40144869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 30362750 - 30362812
Alignment:
Q  226 caccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgc 287  Q
    ||||| |||||  ||| ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  30362750 caccgaccaactagcgcgagttaactcgcgctaaggctcagtggtgcgtgacttaagtcacgc 30362812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 30859824 - 30859782
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcga 370  Q
    |||||||||||| |||||||||||  |||||||||||||||||    
T  30859824 ttaacttgcgcaggggcatttttggaatggctgcagggcgcga 30859782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 38455066 - 38455104
Alignment:
Q  301 tgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    |||||||||||||||||||||| || |||||||||||||    
T  38455066 tgcgcaagttaagtcacgcagcgtgtcttaacttgcgca 38455104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 2914620 - 2914708
Alignment:
Q  169 gattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgca 257  Q
    |||||||||||||||| |||||||   ||||||||| || |||| || || |||||| | || | ||| |||||||||| |||||||||    
T  2914620 gattgaaggttgaaaagctgaccaaattccaaaaaatgtgtgtttttgagctctgacaaacgactaacatgcgtgagtttactcgcgca 2914708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 20377920 - 20377846
Alignment:
Q  23 gggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatagg 94  Q
    ||||||||||||||||| ||   |||| |||||||||||||| ||||| || |||| | |||| |||||||||||    
T  20377920 gggagagagtgaggaggagagtgagaatgtgagatggtgtgaagaaatgggaaagtttagaggtgtatttatagg 20377846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 21066283 - 21066347
Alignment:
Q  275 acttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    |||||||||||||||||  || ||||||||| |||||| |||||  |||||| ||||||| ||||    
T  21066283 acttaagtcacgcagagtctataaggtgcgctagttaactcacgatgcatgagttaacttacgca 21066347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 26500962 - 26501035
Alignment:
Q  23 gggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatagg 94  Q
    ||||||||||||||||| ||   |||| |||||||| ||||||||||| ||||||| | |||| |||||||||||    
T  26500962 gggagagagtgaggaggagagtgagaatgtgagatg-tgtgaggaaattgggaagtttagaggtgtatttatagg 26501035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 26591751 - 26591678
Alignment:
Q  23 gggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatagg 94  Q
    ||||||||||||||||| ||   |||| |||||||| ||||||||||| ||||||| | |||| |||||||||||    
T  26591751 gggagagagtgaggaggagagtgagaatgtgagatg-tgtgaggaaattgggaagtttagaggtgtatttatagg 26591678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 12 - 400
Target Start/End: Complemental strand, 319500 - 319113
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||| |||||| ||||| ||||||||| ||||||| |||||||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  319500 agagaaatagagggagaaagtgagaagggggagaaagtgacatggtgtaaggaaatagggaagtacggaggtgtatttataggtgggaatggtggtgtag 319401  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  319400 gttataaccaccataaatgtggtaaaaaaaacgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccatccaaaaaacgtttgt 319301  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtta 311  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  319300 tcttcagttctgaccaccacccaacgtgcgtgagttaactcgcgcatagaccagtggtgcatgacttaagtcacacagaggttataaggtgcgcaagtta 319201  T
Q  312 agtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    | | || |||| |||||||||||||||||| ||||||||| |||||||  ||| ||||| ||| ||||| | |||||||||||||||||    
T  319200 aattacacagcgtgacttaacttgcgcaagagcatttttg-catggctataggacgcgagcaatatgtgttaagtgaagagcagcattc 319113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 14 - 354
Target Start/End: Complemental strand, 13312864 - 13312520
Alignment:
Q  14 agaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggt 113  Q
    |||||||||||||||||||||||||||  |||| |||| |||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  13312864 agaaatagagggagagagtgaggagggagagaaggtgatatggtgtgagaaaataggaaagtatggaggagtatttataagtgggaatggtagtttaggt 13312765  T
Q  114 tataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt-----agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtt 208  Q
    |||||| | |||||||||||||       |||||||| ||||      | |||||||||| |||||| |||||| | | |||||  |||||||||| |||    
T  13312764 tataacaaacataaatgtggtcaaaaaa-cgtgtaaaatttggtaaaaaaaaaacgtgtgaattgaatgttgaataaccgaccatagtccaaaaaatgtt 13312666  T
Q  209 tgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaag 308  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||  |||| |||||| ||||||||||||||||||||| ||| ||||||||  ||    
T  13312665 tgttcttcagttctgaccatcggccaacgtacgtgagttaactcgtgcccaggccagtggttcgtgacttaagtcacgcagagcttataaggtgcgttag 13312566  T
Q  309 ttaagtcacgcagcatgacttaacttgcgcaagggcatttttgaca 354  Q
    |||||||||||||| ||||||||||  |||| ||||||||| ||||    
T  13312565 ttaagtcacgcagcgtgacttaactaacgcatgggcattttcgaca 13312520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 14153790 - 14153552
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| |||    
T  14153790 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggagtggtagtatag 14153691  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||||||       |||||||| |  |||  ||||||||||||||||| |||||||| |||||| | | ||||||||||||||    
T  14153690 gttgtaaacaccattaatgtggtc-aagaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccgcagaccaaaaaacgtttg 14153592  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||||||||||  |||||||||||  ||| ||||||||||    
T  14153591 ttcttcagttctg--caccggccaactagcgcgagttaactc 14153552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 16444697 - 16444465
Alignment:
Q  17 aatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttat 116  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| || |||||||||||| ||| |||||||||||||||||||||||| |||||| |    
T  16444697 aatagagggagagagtgaggagggga-gaaagtgatatggtgtgagcaattagggaagtatgaaggggtatttataggtgggaatggtagtataggttgt 16444599  T
Q  117 aaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttctt 215  Q
    || |||||| |||||||||       |||||||| |  | |  ||||||||||||||||| |||||||| |||||||| | || ||||| ||||||||||    
T  16444598 aaacaccattaatgtggtc-aaaaaacgtgtaaaatagtctttaaaacgtgtggattgaatgttgaaaaactgaccacagaccgaaaaatgtttgttctt 16444500  T
Q  216 cagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||  |||||||||||  ||||||||||||||    
T  16444499 cagttctg--caccggccaactagcgtgagttaactc 16444465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 35053743 - 35053532
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||| |||||||||||||||||| ||| || ||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||| |||    
T  35053743 agagcaatagagggagagagtgaagagagggagaaagtgatatggtgtgagcaattagggaagtatggaggggtatttataggtgggaatggtagtatag 35053644  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| ||| |||||       |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | |||| |||||||||    
T  35053643 gttgtaaacaccattaatatggtc-aaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaacaaacgtttg 35053545  T
Q  211 ttcttcagttctg 223  Q
    |||||||||||||    
T  35053544 ttcttcagttctg 35053532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 11 - 280
Target Start/End: Complemental strand, 24173836 - 24173565
Alignment:
Q  11 cagagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgta 110  Q
    |||||||||||||||||||| |||||| ||| ||||||||| |||||||| |||| ||||||| |||||||| |||||| ||||||||||| ||||| ||    
T  24173836 cagagaaatagagggagaga-tgaggacggggagaaagtgatatggtgtgtggaattagggaaatatggaggggtatttgtaggtgggaattgtagtata 24173738  T
Q  111 ggttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttg---tagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgt 207  Q
    |||| |||  ||||| || ||||||       |||||||| ||||    | |||||| |||||||||| |||||||| |||||||  |  ||||||| ||    
T  24173737 ggttgtaaataccattaacgtggtcaaaaaaacgtgtaaaatttggtaaaaaaaacgcgtggattgaatgttgaaaaactgaccaaagatcaaaaaatgt 24173638  T
Q  208 ttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaa 280  Q
    ||||||||||||||||||  ||||||||| |||||||||||||| ||  | | |  |||||||||||||||||    
T  24173637 ttgttcttcagttctgacagccggccaacatgcgtgagttaacttgcagacaagtcagtggtgcgtgacttaa 24173565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 14830820 - 14830590
Alignment:
Q  20 agagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataac 119  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||| || | ||| || |||     
T  14830820 agagagagagagtgaggagggggagaaagtgatatggtgtgaggaattaaggaagtatggaggggtatttataggtgggaatgatattatagattgtaaa 14830721  T
Q  120 caccataaatgtggtcnnnnnnncgtgtaaagtt-tgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcag 218  Q
    |||||| ||||||||        |||||||| || |||  ||| | ||||||||||| |||||||| |||||||| | |||||| |||||||||||||||    
T  14830720 caccattaatgtggt-aaaaaaacgtgtaaaattgtgttaaaagcatgtggattgaatgttgaaaaactgaccacagaccaaaacacgtttgttcttcag 14830622  T
Q  219 ttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||||  |||||||||||  ||| ||||||||||    
T  14830621 ttctg--caccggccaactggcgcgagttaactc 14830590  T

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Target: chr6; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 23912236 - 23912366
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacg 286  Q
    ||||||||||||||||||||| | ||||| || ||| ||||||||||||| ||||||| |||||||||||| | || |||||||| ||||||||||||||    
T  23912236 tgaccaccgtccaaaaaacgtgtattcttgagctctaaccaccggccaacttgcgtgaattaactcgcgcacatgccagtggtgcatgacttaagtcacg 23912335  T
Q  287 cagaggttacaaggtgcgcaagttaagtcac 317  Q
    ||||| ||| ||||||||  |||||||||||    
T  23912336 cagagcttataaggtgcgtgagttaagtcac 23912366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 11718464 - 11718582
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtta 115  Q
    |||||||||||||||||||||||||   ||| |||| |||||||||| ||||| ||||||||| ||| ||||||||||||| |||||||||| || ||||    
T  11718464 aaatagagggagagagtgaggagggagggaatgtgatatggtgtgagaaaataaggaagtatgaaggggtatttataggtgagaatggtagtataagtta 11718563  T
Q  116 taaccaccataaatgtggt 134  Q
    |||  ||||| ||||||||    
T  11718564 taaataccattaatgtggt 11718582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 11599121 - 11599016
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||||||||| ||||  ||||||||||||||||||||  ||||||| |||||||||||||    
T  11599121 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcggtggtgcatgacttaagtcac 11599022  T
Q  286 gcagag 291  Q
    ||||||    
T  11599021 gcagag 11599016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 30634103 - 30634247
Alignment:
Q  190 ccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgca 288  Q
    ||||||||| |||||||||||| |||||||| | ||||||||||||| ||||  ||||||||| || | ||||| ||||||||||||||||||||||| |    
T  30634103 ccaccgtcccaaaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcacgtagaggctcagtggtgcgtgacttaagtcacgta 30634202  T
Q  289 gaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    ||| ||   |||||||  ||||||||| ||| || ||||||||||    
T  30634203 gagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaact 30634247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 2419755 - 2419849
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgc 254  Q
    |||||||||  |||||| ||||||||||||||||  ||  |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2419755 aaaacgtgtaaattgaatgttgaaaacctgaccaaagtg-aaaaaatgtttgttcttcagttctgaccaccggccaacttgcgtgagttaactcgc 2419849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 3515203 - 3515305
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||| |||||||||||| || ||||| | ||||||||||||| ||||  |||||||||||| | ||||| ||||||||||||||||||||||    
T  3515203 tgaccaccgtccgaaaaacgtttgtgctacagtttttaccaccggccaacttgcgcaagttaactcgcgtagaggctcagtggtgcgtgacttaagtcac 3515302  T
Q  286 gca 288  Q
    |||    
T  3515303 gca 3515305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 4362412 - 4362512
Alignment:
Q  300 gtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcatt 399  Q
    |||||||||||||| |||||| | |||||||||||||||||||| | ||| | ||  |||||||||||||| | ||| ||||||  |||||||||| |||    
T  4362412 gtgcgcaagttaaggcacgcaacgtgacttaacttgcgcaagggtaatttaggcaacgctgcagggcgcgagcgaaaagtgctggatgaagagcagaatt 4362511  T
Q  400 c 400  Q
    |    
T  4362512 c 4362512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 17399135 - 17399041
Alignment:
Q  187 tgaccaccgtcca-aaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaa 280  Q
    ||||||||||||| ||||| || ||||||| |   | |||||||||||||| ||||||||||||||||| || | || |||||||||||||||||    
T  17399135 tgaccaccgtccacaaaaatgtgtgttcttgatgacagaccaccggccaacttgcgtgagttaactcgcacacatgccagtggtgcgtgacttaa 17399041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 35054848 - 35054777
Alignment:
Q  23 gggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatagg 94  Q
    |||||||||||||||| |  |||| ||||| |||||||||||||| ||||||| | |||| |||||||||||    
T  35054848 gggagagagtgaggagagtgagaatgtgagttggtgtgaggaaatggggaagtttagaggtgtatttatagg 35054777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 17399283 - 17399213
Alignment:
Q  27 gagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgg 97  Q
    ||||||||||| ||  ||||||  | ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  17399283 gagagtgaggatggagagaaagcaatatgttgtgaggaaatagggaagtatgaaggggtatttataggtgg 17399213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 23912082 - 23912136
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgg 97  Q
    |||| |||||||||||||||||||| | ||||| |||||| ||||||||||||||    
T  23912082 agaatgtgagatggtgtgaggaaattgagaagtttggaggggtatttataggtgg 23912136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 7526852 - 7526807
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgca 339  Q
    ||||| |||||||||||||| |||||||| ||||||||||||||||    
T  7526852 tacaacgtgcgcaagttaagacacgcagcgtgacttaacttgcgca 7526807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 11599984 - 11600050
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    |||||| |||||  |||||||| | ||||||||||||| |||| | |||||||||| ||||||||||    
T  11599984 ttaactagcgcagaggcattttggtcatggctgcagggtgcgagcgaaatgtgctgggtgaagagca 11600050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 11718655 - 11718713
Alignment:
Q  199 aaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgca 257  Q
    |||||||||||||| ||||| ||  ||||  |||||||||||||||||||||| |||||    
T  11718655 aaaaaacgtttgttattcagctccaaccattggccaacgtgcgtgagttaacttgcgca 11718713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 9521462 - 9521409
Alignment:
Q  238 tgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagag 291  Q
    |||| ||||||| ||||| | | || ||||||||||||||||||||||||||||    
T  9521462 tgcgggagttaagtcgcgaacatgccagtggtgcgtgacttaagtcacgcagag 9521409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 235; Significance: 1e-129; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 7 - 318
Target Start/End: Original strand, 41758518 - 41758829
Alignment:
Q  7 gaagcagagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtag 106  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  41758518 gaagaagagaaatagagggagagagtgaggagggggagaaagtgagatggtgtgaggaaatagggaagtatggaggggtatttataggtgagaatggtag 41758617  T
Q  107 tgtaggttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacg 206  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41758618 tgtaggttataaccaccataaatgtggtcaaaaaaacgtgtaaagtttgtagaaaatgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacg 41758717  T
Q  207 tttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgca 306  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  | |||||||||||| ||||||||||||||||| ||  ||||||    
T  41758718 tttgttcttcagttctgaccaccagccaacgtgcatgagttaactcgcgcataggtcaatggtgcgtgactcaagtcacgcagaggttataaaatgcgca 41758817  T
Q  307 agttaagtcacg 318  Q
    ||||||||||||    
T  41758818 agttaagtcacg 41758829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 12 - 377
Target Start/End: Complemental strand, 6427558 - 6427195
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||     
T  6427558 agagaaatagagggagagagtgaggtggaggagaaagtgagatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtataa 6427459  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttg-tagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| |||  ||||| |||||| ||        ||||||| |||| || |||||||||||| |||| |||| ||| ||||  |  | ||||||||||||||    
T  6427458 gttgtaaataccattaatgtgatcaaaaaat-gtgtaaaatttggtaaaaaacgtgtggaatgaatgttggaaaactgataag-gaccaaaaaacgtttg 6427361  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtt 310  Q
    |||||||| ||| | |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| || ||| ||||||||| ||||    
T  6427360 ttcttcagctctaatcaccggccaaggtgcgtgagttaactcgcgcataggccagttgtgcgtgacttaagtcacgcatagtttataaggtgcgctagtt 6427261  T
Q  311 aagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaat 377  Q
    ||||||||| ||| ||||||||| |||||||| || ||||| |||||||||||||||||| ||||||    
T  6427260 aagtcacgctgcaagacttaactagcgcaaggaca-ttttggcatggctgcagggcgcgagcaaaat 6427195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 13 - 400
Target Start/End: Original strand, 7083780 - 7084171
Alignment:
Q  13 gagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtagg 112  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||| ||||    
T  7083780 gagaaatagagggagagagtgaggaggaggagagagtgagatggtgtgaggagttagggaagtatggagggatatttataggtgggaatggtagtatagg 7083879  T
Q  113 ttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttg-tagaaaa----cgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgt 207  Q
    || |||  | ||| |||||||||       ||||||||||||| || ||||    |||||||| |||  |||| ||| |||| ||  | ||||||||  |    
T  7083880 ttgtaaatatcattaatgtggtcaaaaaa-cgtgtaaagtttggtaaaaaaaacacgtgtggaatgagtgttggaaaactgatcaaggaccaaaaaatat 7083978  T
Q  208 ttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaa 307  Q
    |||| |||||| |||||||||||||||| |||| ||||||||||||||||||||| | | ||||||||||||||||||||| || ||| ||||||||| |    
T  7083979 ttgtccttcagctctgaccaccggccaaggtgcatgagttaactcgcgcataggccattagtgcgtgacttaagtcacgcatagattataaggtgcgcta 7084078  T
Q  308 gttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||||||||||| || |||||||||| | ||||||| ||||||| |||| || |||||||||| |||||| ||| ||||||| ||||| ||||    
T  7084079 gttaagtcacgctgcgtgacttaactagtgcaagggtatttttggcatgacttcagggcgcgagcaaaatatgcagagtgaatagcagaattc 7084171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 43 - 381
Target Start/End: Original strand, 1172777 - 1173116
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnn 142  Q
    |||||||||||||||||||||||  ||| |||||||||||  ||||||||||||||||||||||| |||||| ||| |||||| |||||| |            
T  1172777 agaaagtgagatggtgtgaggaataaggtaagtatggagggatatttataggtgggaatggtagtataggttgtaaacaccattaatgtgataaaaaaat 1172876  T
Q  143 cgtgtaaagtttgt--agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgc 240  Q
     ||||||| ||||   | |||| ||||||| |||| ||||||||||||||||  | |||||||||||||||||||||| ||| |||| || |||| ||||    
T  1172877 -gtgtaaaatttggtaaaaaaatgtgtggaatgaatgttgaaaacctgaccaaagaccaaaaaacgtttgttcttcagctctaaccatcgaccaaggtgc 1172975  T
Q  241 gtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaa 340  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| |||||||||  |||||||||||| || ||||||||||  |||||    
T  1172976 gtgagttaactggcgcataggccagtggtgcgtaacttaagtcacgcagaggttataaggtgcgcttgttaagtcacgctgcgtgacttaactaacgcaa 1173075  T
Q  341 gggcatttttgacatggctgcagggcgcgatcaaaatgtgc 381  Q
    |||||| ||||| ||| |||||| |||||| | ||||||||    
T  1173076 gggcatatttgatatgcctgcagtgcgcgagccaaatgtgc 1173116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 12 - 288
Target Start/End: Complemental strand, 25898913 - 25898634
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||    
T  25898913 agagaaatagagggagagagtgaggagggagagaaagtgatatggtgtgagaaaatagggaagtatggaggggtatttataggtgggaatggtagtatag 25898814  T
Q  112 gttataaccaccataaatgtggt-cnnnnnnncgtgtaaagtttgt--agaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtt 208  Q
    ||||||||||||||||||||| |         |||||| |  ||||  | ||||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  25898813 gttataaccaccataaatgtgataaaaaaaaacgtgtagaagttgtaaaaaaaacgtgtagattgaaggttaaaaacctgaccaccgtccaaaaatcgtt 25898714  T
Q  209 tgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgca 288  Q
    ||||| | |  || ||||||| |||||||||||||||||||||| ||| ||||| |||||||  |||||||| |||||||    
T  25898713 tgttcatgaactcagaccaccagccaacgtgcgtgagttaactcacgcctaggccagtggtgtatgacttaaatcacgca 25898634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 40016994 - 40017216
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  40016994 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 40017093  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| |||||||||       |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | ||||||||||||||    
T  40017094 gttgtaaacaccattaatgtggtc-aaaaaacgtgtaaaataatgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgtttg 40017192  T
Q  211 ttcttcagttctgaccaccggccaac 236  Q
    |||||||||||||  |||||||||||    
T  40017193 ttcttcagttctg--caccggccaac 40017216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 12 - 331
Target Start/End: Original strand, 28784569 - 28784900
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||| ||| | ||     
T  28784569 agagaaatagagggagagagtgaggagggaaaaaaagtgatatggtgtgaggaaatagagaagtatggaggggtatttataggtgggaatagtaatataa 28784668  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgt-------------agaaaacgtgtggattgaaggttgaaaacctgaccaccgtcc 198  Q
    |||||||| |||||||||||| ||       |||||||| || ||             | ||||||||| ||||||| |||||| | |||||||  ||||    
T  28784669 gttataacaaccataaatgtgttc-aaaaaacgtgtaaatttggtaaaaaaaaaaaaaaaaaaacgtgtagattgaatgttgaataactgaccaaagtcc 28784767  T
Q  199 aaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaa 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |  |||| ||||| | ||||||||||||||||| |  ||| ||    
T  28784768 aaaaaacgtttgttcttcagttctgaccaccgaccaacgtgcgtgagttaactcgcacccaggccagtggggtgtgacttaagtcacgcataaattataa 28784867  T
Q  299 ggtgcgcaagttaagtcacgcagcatgacttaa 331  Q
    |||| |   ||||||||||||||| | ||||||    
T  28784868 ggtgtgtttgttaagtcacgcagcgtaacttaa 28784900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 3461224 - 3461463
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  3461224 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatggtagtatag 3461323  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| ||||| |||       |||||||| |  |||  |||| ||||||||| || |||||| | |||||||| | ||||||||||||||    
T  3461324 gttgtaaacaccattaatgtagtcaaaaaaacgtgtaaaatagtgttaaaaatgtgtggattaaatgttgaagaactgaccacagaccaaaaaacgtttg 3461423  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||| |||||||  |||||||||||  ||||||||||||||    
T  3461424 ttctttagttctg--caccggccaactggcgtgagttaactc 3461463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 27 - 333
Target Start/End: Complemental strand, 16101137 - 16100835
Alignment:
Q  27 gagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccata 126  Q
    ||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||  ||| ||||||||||| ||| ||    
T  16101137 gagagtgaggagggagagaaagtgatatggtgtgaggaaatagagaagtatggaggggtatttataggtgagaatgacagtataggttataactaccgta 16101038  T
Q  127 aatgtggtcnnnnnnncgtgtaaagtttgt-agaaaacgtgtggattgaaggttgaaaacctgaccaccgtcca-aaaaacgtttgttcttcagttctga 224  Q
    |||||||||       || |||||| |||| | ||||||      |||||| |||||||  | ||||||||||| |||||||| | ||||| ||  | ||    
T  16101037 aatgtggtcaaaaaaacgggtaaaggttgtaaaaaaacg------ttgaagattgaaaaggtaaccaccgtccacaaaaacgtgtcttcttgaggacaga 16100944  T
Q  225 ccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcat 324  Q
     ||||||||||| |||||||||||||||||||| |||| | ||||||||||||||||||||||||   ||| ||||||||  ||||||| ||||  ||||    
T  16100943 tcaccggccaacttgcgtgagttaactcgcgcacaggcaaatggtgcgtgacttaagtcacgcaggacttataaggtgcgtgagttaagccacgtcgcat 16100844  T
Q  325 gacttaact 333  Q
    |||||||||    
T  16100843 gacttaact 16100835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 1974593 - 1974370
Alignment:
Q  12 agagaaatagagggagagagtgaggagggga-agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgta 110  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||| ||    
T  1974593 agagaaatagagggagagagtgaggaggggggagaaagtgatatggtgtgagaaattagggaagtatggaggggtatttataggtgggaatggtagtata 1974494  T
Q  111 ggttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgttt 209  Q
    |||| ||| |||||| |||||||||       |||||||| |  |||  ||||||||||||| ||| |||||||| |||||||| | ||||||||| |||    
T  1974493 ggttgtaaacaccattaatgtggtc-aaaaaacgtgtaaaatagtgttaaaaacgtgtggatagaatgttgaaaaactgaccacagaccaaaaaactttt 1974395  T
Q  210 gttcttcagttctgaccaccggccaac 236  Q
    ||||||| ||||||  |||||||||||    
T  1974394 gttcttcggttctg--caccggccaac 1974370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 14 - 333
Target Start/End: Original strand, 11125597 - 11125916
Alignment:
Q  14 agaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggt 113  Q
    |||||||| ||||||||||||||||| || ||| ||||||| |||| |||||||  |||||| ||||||  |||||||||||||||||| |||| ||||     
T  11125597 agaaatagggggagagagtgaggaggaga-gaatgtgagatagtgtcaggaaatgaggaagtttggagggatatttataggtgggaatgatagtatagga 11125695  T
Q  114 tataaccaccataaatgtggtcnnnnnnncgtgtaaa-gtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgtt 212  Q
    |||||| ||||||| ||| |||       | |||||| ||| | | ||||||||| |||||||||||||||| |||||||  |||||||||| || ||||    
T  11125696 tataactaccataagtgtagtcaaaaaaacctgtaaatgttggaaaaaaacgtgtagattgaaggttgaaaagctgaccaaagtccaaaaaatgtgtgtt 11125795  T
Q  213 cttcagttctgaccacc-ggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtta 311  Q
     || || |||||||| | |||||||  ||||||||||||||||||| | || |||| ||| |||||||||||||||||| | || ||||||||  |||||    
T  11125796 tttgagctctgaccaactggccaaccggcgtgagttaactcgcgcacatgccagtgatgcatgacttaagtcacgcaga-gctataaggtgcgtgagtta 11125894  T
Q  312 agtcacgcagcatgacttaact 333  Q
    |||||||  || ||||||||||    
T  11125895 agtcacgttgcgtgacttaact 11125916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 6271044 - 6270807
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||  ||| |||    
T  6271044 agagaaatagaaggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtgggaatgacagtatag 6270945  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| || ||| |||||| |        |||||||| |  |||  |||| ||||||||| || |||||||| |||||||| |   ||||||||||||    
T  6270944 gttgtaaacatcattaatgtgat-aaaaaaacgtgtaaaatagtgt-taaaatgtgtggattaaatgttgaaaaactgaccacagataaaaaaacgtttg 6270847  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    || ||||||||||  |||||||||||  ||||||||||||||    
T  6270846 tttttcagttctg--caccggccaactggcgtgagttaactc 6270807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 44 - 285
Target Start/End: Complemental strand, 10533016 - 10532795
Alignment:
Q  44 gaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnnc 143  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||  ||||| ||||||||             
T  10533016 gaaaatgatatggtgtgaggaaatagggaagtatggaggggtatttataggtgaaaatggtagtataggttataaataccattaatgtggta-------- 10532925  T
Q  144 gtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtg 243  Q
        |||        ||||||||| |||| || ||||||||  ||||||  | |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  10532924 ----aaa--------aaaacgtgtagattaaatgttgaaaaattgaccaaagaccaaaaaacgtttgttcttcagctctgaccaccggccaacttgcgtg 10532837  T
Q  244 agttaactcgcgcataggctagtggtgcgtgacttaagtcac 285  Q
    |||||||||||||| | || |||||||| |||||||| ||||    
T  10532836 agttaactcgcgcacaagccagtggtgcatgacttaactcac 10532795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 20202493 - 20202582
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaat 101  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  20202493 agagaaatagagggagagagtgaggagggagagaaagtgatatggtgtgagaaaatagggaagtatggaggggtatttataggtgggaat 20202582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 1081873 - 1082020
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | |||||||| |||| ||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  1081873 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggtcaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacttaagtcac 1081972  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||| ||   |||||||  ||||||||| ||| || ||||||||||    
T  1081973 gcagagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaact 1082020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 39223176 - 39223078
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtt 114  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||||||| || ||||||||||||| |||||||||||||| ||||||||| ||||||    
T  39223176 aaatagagggatagagtgaggagggggagaaagtgatatggtgtgaggaattacggaagtatggaggggtatttataggtggaaatggtagtataggtt 39223078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 4846678 - 4846866
Alignment:
Q  35 ggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggt 134  Q
    ||||||| ||||||||| |||||||||| || |||||||||||| ||||||||||||||||||||||| |||| |||||  ||| |||||| ||||||||    
T  4846678 ggagggggagaaagtgatatggtgtgagtaattagggaagtatgaaggagtatttataggtgggaatgatagtataggtcgtaaacaccattaatgtggt 4846777  T
Q  135 cnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctg 223  Q
    |       |||||||| |  |||  ||||||||||||||||| |||||||| || || || | | ||||||  |||||||||||||||||    
T  4846778 c-aaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaatctaactacagacaaaaaaatatttgttcttcagttctg 4846866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 2786834 - 2786729
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| |||||||||||||  ||||| |||||||| | ||||||||||||| ||||  |||||||||||||||||||| |||||||| |||||||||||||    
T  2786834 tgactaccgtccaaaaaatatttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcatgacttaagtcac 2786735  T
Q  286 gcagag 291  Q
    ||||||    
T  2786734 gcagag 2786729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 18172120 - 18172225
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||| ||||| ||||  |||||||||||||||| ||| ||||||||||||||||||||||    
T  18172120 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccgaccaacttgcgcaagttaactcgcgcataagctcagtggtgcgtgacttaagtcac 18172219  T
Q  286 gcagag 291  Q
    ||||||    
T  18172220 gcagag 18172225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 188 - 280
Target Start/End: Original strand, 10399251 - 10399343
Alignment:
Q  188 gaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaa 280  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| | ||||||||| | ||||||||    
T  10399251 gaccaccatccaaaaaatgtttgttcttcagttttgaccaccggcaaacgtgcatgagttaactcgcgcacaagctagtggtacatgacttaa 10399343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 298 - 400
Target Start/End: Complemental strand, 8688206 - 8688104
Alignment:
Q  298 aggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagca 397  Q
    |||||||  ||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||| ||||| |||||||| | | ||||||||||| |    
T  8688206 aggtgcgtgagttaagtcacgctgcatgacttaactagcgcaaggacatttttgacatggctccaggacgcgagcaaaatgtacagggtgaagagcagaa 8688107  T
Q  398 ttc 400  Q
    |||    
T  8688106 ttc 8688104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 22706413 - 22706538
Alignment:
Q  12 agagaaatagagggaga--gagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgt 109  Q
    |||||||||||||||||  |||||||| || | ||||||||||||||||||||||| ||| |||||||||||| |||||||  ||| ||||||||| | |    
T  22706413 agagaaatagagggagagagagtgagggggaggagaaagtgagatggtgtgaggaattagagaagtatggaggggtatttaagggtaggaatggtaatat 22706512  T
Q  110 aggttataaccaccataaatgtggtc 135  Q
    ||||| |||  ||||| |||||||||    
T  22706513 aggttgtaaataccattaatgtggtc 22706538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 40033986 - 40034090
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcag-ttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtca 284  Q
    ||||||||||||||||||| |||||||||||| || | ||||||| ||||| |||| ||||||||||||| | ||||| ||||||||||||||||||||     
T  40033986 tgaccaccgtccaaaaaacatttgttcttcagttttttaccaccgaccaacttgcgcgagttaactcgcgtagaggctcagtggtgcgtgacttaagtct 40034085  T
Q  285 cgcag 289  Q
    |||||    
T  40034086 cgcag 40034090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 12144148 - 12144001
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | | ||| | ||||| ||||  |||||||||| ||||||||| ||||||||||||||||||||||    
T  12144148 tgactaccgtccaagaaacgtttgtgcttcagtttttaacactgaccaacttgcgcaagttaactcgtgcataggctcagtggtgcgtgacttaagtcac 12144049  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    ||| || ||   |||||||  ||||||||| ||| || ||||||||||    
T  12144048 gcaaagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaact 12144001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 2599891 - 2599801
Alignment:
Q  196 tccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacg 286  Q
    |||||||||||| ||||||| ||||| |||||||| | ||| ||||||||||||| ||||||  || ||||||||||||||||||||||||    
T  2599891 tccaaaaaacgtgtgttcttgagttcagaccaccgacaaacctgcgtgagttaacacgcgcaccggttagtggtgcgtgacttaagtcacg 2599801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 7662189 - 7662291
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||| ||| |||||||||| |||||||| | ||||||||||||| ||||  |||||| ||||||||||||| ||||||||||||||||| ||||    
T  7662189 tgactaccgttcaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaaatcgcgcataggctcagtggtgcgtgacttaactcac 7662288  T
Q  286 gca 288  Q
    |||    
T  7662289 gca 7662291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 43 - 287
Target Start/End: Complemental strand, 19044132 - 19043886
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcnnnnnnn 142  Q
    |||| ||||||||||||||| |||| ||||||| |||||| ||||||||||||||||||| ||   ||||||||||  || |||||||| ||            
T  19044132 agaatgtgagatggtgtgagaaaatggggaagtttggaggggtatttataggtgggaatgataacataggttataaatacaataaatgttgtaaaaaaaa 19044033  T
Q  143 -cgtgtaaagtt-tgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgc 240  Q
     |||||||| || |  | ||||||||| || | ||||||||||| ||||||||||| ||||||||   ||||||| || |  ||||||| |||||| |||    
T  19044032 acgtgtaaacttgtaaaaaaaacgtgtagaatcaaggttgaaaaactgaccaccgttcaaaaaacacgtgttcttgagcttagaccaccagccaacctgc 19043933  T
Q  241 gtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgc 287  Q
     |||||||||||||||  | |  | ||||| ||||||||||||||||    
T  19043932 atgagttaactcgcgcccaagtcaatggtgtgtgacttaagtcacgc 19043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 43147411 - 43147516
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||| ||| |||||||  |||||| ||||||| | ||||||||||||| |||| ||||||||||| | | ||||| ||||||||||||||||||||||    
T  43147411 tgaccatcgttcaaaaaatatttgtttttcagtttttaccaccggccaacttgcgcgagttaactcgtgtagaggctcagtggtgcgtgacttaagtcac 43147510  T
Q  286 gcagag 291  Q
    ||||||    
T  43147511 gcagag 43147516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 314
Target Start/End: Complemental strand, 34954150 - 34954022
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | |||||| |||||| || |  |||||||||||||||||||| ||||||||  ||||||||||||    
T  34954150 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccagccaacttgtgcaagttaactcgcgcataggctcagtggtgcacgacttaagtcac 34954051  T
Q  286 gcagaggttacaaggtgcgcaagttaagt 314  Q
    ||| || ||   ||||||||| |||||||    
T  34954050 gcatagattgtgaggtgcgcatgttaagt 34954022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 4846581 - 4846651
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggagg 82  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||| ||| || ||||||||||||||||    
T  4846581 agagaaatagagggagagagtgaggagagggagaaagtgatatggtgcgagtaattagggaagtatggagg 4846651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 20202605 - 20202728
Alignment:
Q  197 ccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttac 296  Q
    |||||||| || ||||||| || || |||||| ||||||| |||| ||||||||||||||  |||| ||||||| |||||| |||||||||||| | ||     
T  20202605 ccaaaaaatgtgtgttcttgagctcagaccactggccaacctgcgcgagttaactcgcgcccaggccagtggtgtgtgactcaagtcacgcaga-gctat 20202703  T
Q  297 aaggtgcgcaagttaagtcacgcag 321  Q
    ||| ||||  |||||||||||||||    
T  20202704 aagatgcgtgagttaagtcacgcag 20202728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 9883721 - 9883837
Alignment:
Q  18 atagagggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtt 114  Q
    |||| |||||| |||||||||| ||   |||| ||||||||||||||| |||| ||||||| |||||| ||||||||||||  ||||||||   ||||||    
T  9883721 atagggggagatagtgaggaggagagtgagaatgtgagatggtgtgagaaaatggggaagtttggaggggtatttataggtatgaatggtaacataggtt 9883820  T
Q  115 ataaccaccataaatgt 131  Q
    ||||  |||||||||||    
T  9883821 ataagtaccataaatgt 9883837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 2740607 - 2740501
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagc 393  Q
    ||||| |||||||||||||| ||| | || ||||||||||||||||  || | ||| | ||  |||||||||||||||| ||| ||| || |||||||||    
T  2740607 tacaacgtgcgcaagttaagacacactgcgtgacttaacttgcgcagaggtaatttaggcaacgctgcagggcgcgatcgaaaagtgttgggtgaagagc 2740508  T
Q  394 agcattc 400  Q
    |||||||    
T  2740507 agcattc 2740501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 10399119 - 10399173
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgg 97  Q
    |||| |||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  10399119 agaatgtgagatggtgtgaggaaatggggaagtttggaggggtatttataggtgg 10399173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 19401788 - 19401879
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    |||| |||||||||||| |||||||| |||||||| | ||||||||  |||||| ||||||||||  |||||||||||  | ||||||||||||    
T  19401788 aaaatgtgtggattgaatgttgaaaaactgaccacagaccaaaaaatatttgtttttcagttctg--caccggccaactagtgtgagttaactc 19401879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 7081500 - 7081436
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagag 392  Q
    |||||| ||||||| |||||||| ||||||||||||| ||||| |||||| ||| | ||||||||    
T  7081500 ttaactagcgcaagagcatttttaacatggctgcaggacgcgagcaaaatatgcagggtgaagag 7081436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 339 - 370
Target Start/End: Original strand, 7634092 - 7634123
Alignment:
Q  339 aagggcatttttgacatggctgcagggcgcga 370  Q
    ||||||||||||||||||||||||||||||||    
T  7634092 aagggcatttttgacatggctgcagggcgcga 7634123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 7661242 - 7661176
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    |||||| ||||| ||||||||| ||||||| ||||||| || | | | |||||||||||||||||||    
T  7661242 ttaactagcgcaggggcattttggacatggttgcagggtgcaagcgagatgtgctgagtgaagagca 7661176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 41758058 - 41757992
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    |||||| |||||| | ||||||||||||||||||||  ||||| |||||||||  | ||||||||||    
T  41758058 ttaactagcgcaatgacatttttgacatggctgcagaacgcgagcaaaatgtgtagggtgaagagca 41757992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 19401933 - 19401897
Alignment:
Q  302 gcgcaagttaagtcacgcagcatgacttaacttgcgc 338  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  19401933 gcgcaagttaagtcacgtagcgtgacttaacttgcgc 19401897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 328 - 400
Target Start/End: Original strand, 34954937 - 34955009
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||||| ||||| ||||||||| | |||||||||| || |||| | ||||||| || ||||||||||| ||||    
T  34954937 ttaactagcgcaggggcattttaggcatggctgcaaggtgcgagcgaaatgtgatgggtgaagagcagaattc 34955009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 144 - 401
Target Start/End: Complemental strand, 29908646 - 29908389
Alignment:
Q  144 gtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtg 243  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  29908646 gtgtaaaggttgtaaaaaacgtgtggattgaaagttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctaaccaccggccaacgtgcatg 29908547  T
Q  244 agttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaaggg 343  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  29908546 agttaactcgcgcataggccagtggcgcgtgacttaagtcacgcagaggttataaggtgcgcaagttaagtcacgcagcgtaacttaacttgcgcaaggg 29908447  T
Q  344 catttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattct 401  Q
    |||||||| ||| |||||||||||||| ||||||||||||  ||||||||| ||||||    
T  29908446 catttttggcatagctgcagggcgcgagcaaaatgtgctggatgaagagcaacattct 29908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 12 - 261
Target Start/End: Original strand, 25685864 - 25686113
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25685864 agagaaaaagagggagagagtgaggagggagagaaagtgagatggtgtgaggaaatagggaagtatggaggggtatttataggtgggaatggtagtgtag 25685963  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    ||||||||||||||||||||||||       ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25685964 gttataaccaccataaatgtggtcaaaaatacgtgtaaaggttgtaaaaaacgtgtggaatgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 25686063  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcatagg 261  Q
    ||   ||||||||||||| |||||||||||||||||||||||||||||||    
T  25686064 tcaagagttctgaccaccagccaacgtgcgtgagttaactcgcgcatagg 25686113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 12 - 261
Target Start/End: Original strand, 24937208 - 24937457
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  24937208 agagaaatagagggagagagtgaggagggggaaaaagtgagatggtgtgagaaaatagggaagtatggaggggtatttataggtgggaatgatagtgtag 24937307  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 211  Q
    ||||||||||||||||||||||||       ||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24937308 gttataaccaccataaatgtggtcaaaaatacgtgtaaagtttgtaaacaacgtgtggaatgaaggttgaaaacctgaccaccgtccaaaaaacgtttgt 24937407  T
Q  212 tcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcatagg 261  Q
    ||   |||||||| ||||||||||||||||||||||||||||||||||||    
T  24937408 tcaagagttctgatcaccggccaacgtgcgtgagttaactcgcgcatagg 24937457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 16 - 394
Target Start/End: Original strand, 29132449 - 29132828
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtta 115  Q
    |||||||||| ||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||| || | ||||||     
T  29132449 aaatagagggtgagagtgaggagggggagaaagtgatatgttgtgaggaattagggaagtatggaggggtatttataggtgggaatgataatataggttg 29132548  T
Q  116 taaccaccataaatgtggtcnnnnnnncgtgtaaagtttg-tagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttct 214  Q
    |||  ||||| |||||||||       |||||||| |||| || |||| ||||||| |||| |||||||| |||||||  | ||||||||||||||||||    
T  29132549 taaataccattaatgtggtcaaaaaaacgtgtaaaatttggtaaaaaatgtgtggaatgaatgttgaaaaactgaccaaagaccaaaaaacgtttgttct 29132648  T
Q  215 tcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagt 314  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||  ||| ||||||||  ||||||||    
T  29132649 tcagctctgaccaccggccaacgtgcgtgagttaactcgcgcataggccggtggtgcgtgacttaagtcacgtagaacttataaggtgcgttagttaagt 29132748  T
Q  315 cacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    ||||  || ||||||||||  |||| |||||| || |  ||||||||||| ||||| | |||||||||| ||||||||||    
T  29132749 cacgttgcgtgacttaactaacgcaggggcatattaggaatggctgcaggacgcgagcgaaatgtgctgggtgaagagca 29132828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 12 - 285
Target Start/End: Complemental strand, 13785318 - 13785046
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||  ||| ||||| ||||||  |||||||||| ||||||||||| |||||||||||||||||||||||| |||    
T  13785318 agagaaatagagggagagagtgaggagggagagagagtgatatggtg--aggaaataggaaagtatggaggggtatttataggtgggaatggtagtatag 13785221  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgta-aagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||||||||||||||||||||||||       |||||| |||||   | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  13785220 gttataaccaccataaatgtggtcaaaaaaacgtgtagaagttgtaaaaaaacgtgtagattgaaagttgaaaacctgaccaccgtccaaaaaacgtttg 13785121  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcac 285  Q
    ||| | || || ||||| |||||||||||||||||||||||||| | ||||| | ||||||||||||||| ||||    
T  13785120 ttcatgagctcagaccatcggccaacgtgcgtgagttaactcgcacttaggccaatggtgcgtgacttaactcac 13785046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 12 - 365
Target Start/End: Complemental strand, 8556513 - 8556160
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||||| || ||||||||||||| |||||||||||||| ||||||||| |||    
T  8556513 agagaaatagagggagagagtgaggaggaggagaaagtgagatgatgtgaggaattatggaagtatggaggggtatttataggtggaaatggtagtatag 8556414  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagttt-gtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    |||||||  ||||| ||||| |||       |||||||| ||| ||| |||  ||||||| |||| |||| ||| |||| ||  | ||||||||  ||||    
T  8556413 gttataaataccattaatgtagtcaaaaaa-cgtgtaaaatttcgtaaaaattgtgtggaatgaatgttggaaaactgatcaaggaccaaaaaatatttg 8556315  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagtt 310  Q
    |||||||| |||||||||||||||  ||| |||||| |||||| |||||||  | || ||||||||||||||||| || || ||| ||||||||| ||||    
T  8556314 ttcttcagctctgaccaccggccatggtgtgtgagtaaactcgtgcatagggcattgatgcgtgacttaagtcacacatagattataaggtgcgccagtt 8556215  T
Q  311 aagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcaggg 365  Q
    ||||||||  || |||||||||| ||||||| ||||||||| |||||||||||||    
T  8556214 aagtcacgttgcgtgacttaactagcgcaagagcatttttggcatggctgcaggg 8556160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 12967656 - 12967418
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||    
T  12967656 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagtgaagtatggaggggtatttataggtgggaatggtagtatag 12967557  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| || ||| |||||||||       |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | ||||||||||||||    
T  12967556 gttgtaaacatcattaatgtggtc-aaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaaaacgtttg 12967458  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||| ||||   |||||||||||  ||||||||||||||    
T  12967457 ttcttcaattct--acaccggccaactagcgtgagttaactc 12967418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 22495715 - 22495953
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||    
T  22495715 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatgaaggggtatttataggtgggaatggtagtatag 22495814  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
     || ||| |||||| |||||||||        ||||||| |  |||  ||||||||||||||||| ||||||||  ||||||| | ||||||||||||||    
T  22495815 attgtaaacaccattaatgtggtcaaaaaaa-gtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaattgaccacagaccaaaaaacgtttg 22495913  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||||||||||   |||||||||||  ||| ||||||||||    
T  22495914 ttcttcagttct--acaccggccaactggcgcgagttaactc 22495953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 11713395 - 11713156
Alignment:
Q  15 gaaatagagggagagagtgaggaggggaagaaagtgagat---ggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||||||||| ||||||||| ||   ||||||||||| |||||||| ||| ||| |||||||||||||||||||||||| |||    
T  11713395 gaaatagagggagagagtgaggagggggagaaagtgatatatgggtgtgaggaattagggaagcatgaaggggtatttataggtgggaatggtagtatag 11713296  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||| ||| |||||| ||||||||        |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | | ||||||||||||    
T  11713295 gttgtaaacaccattaatgtggtaaaaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagactaaaaaacgtttg 11713196  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    || || |||||||  ||||||| |||  ||||||||||||||    
T  11713195 ttttttagttctg--caccggctaactagcgtgagttaactc 11713156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 203 - 394
Target Start/End: Complemental strand, 12874327 - 12874136
Alignment:
Q  203 aacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtg 302  Q
    |||||||||||||||| ||| |||||||  |||  ||||||||||||||||||||||||  ||||||||||||||||||||||| |||| ||| |||| |    
T  12874327 aacgtttgttcttcagctcttaccaccgctcaagttgcgtgagttaactcgcgcataggtcagtggtgcgtgacttaagtcacgtagagattataaggcg 12874228  T
Q  303 cgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    |||  |||||||||||  |||||||||||||  |||||| |||| ||||  |||| |||||||||||| | |||| ||||| ||||||||||    
T  12874227 cgctggttaagtcacgttgcatgacttaactaacgcaagagcatatttggtatggttgcagggcgcgaaccaaatatgctgggtgaagagca 12874136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 18394604 - 18394851
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||| |||    
T  18394604 agagcaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattagggaagtatggaggggtatttataggtggaaatggtagtatag 18394703  T
Q  112 gttataaccaccataaatg--------tggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaa 202  Q
    ||| ||| |||||| ||||        | ||        |||||||| |  |||  ||||||||||||||||| |||||||| |||||||| | ||||||    
T  18394704 gttgtaaacaccattaatgttgaaaaatagtgttaaaaacgtgtaaaatagtgttaaaaacgtgtggattgaatgttgaaaaactgaccacagaccaaaa 18394803  T
Q  203 aacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    || |||||||||| |||||||  |||||||||||  ||||| ||||||||    
T  18394804 aatgtttgttctttagttctg--caccggccaactagcgtgggttaactc 18394851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 159 - 333
Target Start/End: Original strand, 6903674 - 6903847
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcat 258  Q
    |||||||||  |||||  ||||||||||||||||  ||  |||||| ||||||||||||||||||||||||||||||  || |||||||||||||||||     
T  6903674 aaaacgtgttaattgagtgttgaaaacctgaccaaagtgaaaaaaatgtttgttcttcagttctgaccaccggccaaa-tgtgtgagttaactcgcgcac 6903772  T
Q  259 aggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
     ||| |||||||||||||||||| |||||| || ||| | |||||   |||||||||||||||| ||||||||||    
T  6903773 cggccagtggtgcgtgacttaagccacgcatagattatatggtgcatgagttaagtcacgcagcgtgacttaact 6903847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 42121656 - 42121758
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||| |||    
T  42121656 agagaaatagagggagagagtgaggagggggagaaaatgatatggtgtgaggaattaaggaagtatggaggggtatttataggtgggaatggtagtatag 42121755  T
Q  112 gtt 114  Q
    |||    
T  42121756 gtt 42121758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 2155080 - 2155182
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||| |||    
T  2155080 agagaaatggagggatagagtgaggagggggagaaagtgagatggtgtgaggaattagggaagtatgaaggggtatttataggtgagaatggtagtatag 2155179  T
Q  112 gtt 114  Q
    |||    
T  2155180 gtt 2155182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 4616623 - 4616770
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||| |||||||||||| |||||||| | ||||||||||||| ||||  |||||||||||| | ||||| ||||| ||||||||||||||||    
T  4616623 tgaccaccgtcccaaaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgtagaggctcagtggggcgtgacttaagtcac 4616722  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    |||||| ||   | |||||  ||||||||||| |||| ||||||||||    
T  4616723 gcagagcttgtgaagtgcgtgagttaagtcacacagcgtgacttaact 4616770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 187 - 394
Target Start/End: Original strand, 32737857 - 32738065
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | |||| |||||||| ||||  ||||||||| |||| ||||| ||||||||||||||||||||||    
T  32737857 tgactaccgtccaagaaacgtttgtgcttcagtttttaccatcggccaacttgcgcaagttaactcacgcagaggctcagtggtgcgtgacttaagtcac 32737956  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgag 385  Q
    ||| |  ||| ||||||||    ||||||||||| |  ||||||||||  ||||||||||| ||||  | |  |||||||||||| | |||||  ||| |    
T  32737957 gcacaacttataaggtgcgtttattaagtcacgctgtgtgacttaactaacgcaagggcatatttggaaggcttgcagggcgcgagcgaaatgaactggg 32738056  T
Q  386 tgaagagca 394  Q
    |||||||||    
T  32738057 tgaagagca 32738065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 187 - 402
Target Start/End: Original strand, 41192368 - 41192584
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| ||| |||| | ||||||||||||| ||||  ||||||||||| |||||||| ||||||| ||||||||||||||    
T  41192368 tgactaccgtccaagaaacgtttgtgctttagtttttaccaccggccaacttgcgcaagttaactcgcacataggctcagtggtgtgtgacttaagtcac 41192467  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgag 385  Q
     ||||| ||   |||||||  ||||||||| ||| || ||||||||||  |||| ||  || ||||  |    |||||||||||| |||||||||| | |    
T  41192468 acagagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaactcacgcagggttatatttggaaaaagtgcagggcgcgaacaaaatgtgcaggg 41192567  T
Q  386 tgaagagcagcattctt 402  Q
    |||||||||| ||||||    
T  41192568 tgaagagcagaattctt 41192584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 36 - 288
Target Start/End: Complemental strand, 28266261 - 28266006
Alignment:
Q  36 gaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtc 135  Q
    |||||| ||||||||| ||||||||||||| || ||||||||||| |  ||||||||| ||||||||||||| |||| ||||| || ||| ||||| ||     
T  28266261 gagggggagaaagtgatatggtgtgaggaattaaggaagtatggaaggatatttatagatgggaatggtagtataggatataaacatcattaatgtcgt- 28266163  T
Q  136 nnnnnnncgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccacc----gtccaaaaaacgtttgttcttcagttctgaccaccgg 231  Q
           |||||| | |   || ||||||||  ||||||| |||||||| ||||||| |    | |||||||| |||||||||||   |||||||||||     
T  28266162 aaaaaaacgtgtataatggataaaaaacgtggagattgaatgttgaaaaactgaccaaccacagaccaaaaaatgtttgttcttcgtctctgaccaccga 28266063  T
Q  232 ccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgca 288  Q
     ||||||||||||||||||||||||| | |  ||||||||||||| ||| |||||||    
T  28266062 tcaacgtgcgtgagttaactcgcgcacatgtcagtggtgcgtgacctaactcacgca 28266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 20149581 - 20149654
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcatag 260  Q
    |||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  20149581 tgaccaccgttcaaaaaacgtttgttcttcagttatgaccattggccaacgtgcgtgagttaactcgcgcatag 20149654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 5814520 - 5814668
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgactt-aagtca 284  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||||||||| ||||  |||||||||||| ||||||| ||| ||||||||||| ||||||    
T  5814520 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgtataggctcagtagtgcgtgacttaaagtca 5814619  T
Q  285 cgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    ||||||| ||   |||||||  ||||||||| ||| || ||||||||||    
T  5814620 cgcagagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaact 5814668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 34619886 - 34619991
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | | ||||||||||| || |  |||||||||||||||||||| ||| ||||||||||||||||||    
T  34619886 tgactaccgtccaagaaacgtttgtgcttcagtttttatcaccggccaacttgtgcaagttaactcgcgcataggctcagtagtgcgtgacttaagtcac 34619985  T
Q  286 gcagag 291  Q
    ||||||    
T  34619986 gcagag 34619991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 187 - 322
Target Start/End: Complemental strand, 37057301 - 37057165
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||||||||||| |||||||||||| |||||||| | ||||||  | ||| ||| | |||||||||||| | || || ||||||||||||||||||||||    
T  37057301 tgaccaccgtcccaaaaacgtttgtgcttcagtttttaccaccaactaacttgcataagttaactcgcgtaaagacttagtggtgcgtgacttaagtcac 37057202  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagc 322  Q
    |||||| ||   |||||||  ||||||||||||||||    
T  37057201 gcagagcttgtgaggtgcgtgagttaagtcacgcagc 37057165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 187 - 332
Target Start/End: Original strand, 5290686 - 5290831
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    ||||||||||||| ||| ||| |||  ||||||| | ||||||| ||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  5290686 tgaccaccgtccagaaa-cgtctgtgtttcagtttttaccaccgtccaacttgcgcgagttaactcacgcataggctcagtggtgcgtgacttaagtcac 5290784  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaac 332  Q
    |||||| ||   |||| |   ||||||||||| |||| |||||||||    
T  5290785 gcagagcttgagaggtacatgagttaagtcacacagcgtgacttaac 5290831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 1888020 - 1887915
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | |||||||| |||| ||||  |||||||||||||||| | | ||| | ||||||||||||||||    
T  1888020 tgactaccgtccaagaaacgtttgtgcttcagtttttaccaccgggcaacttgcgcaagttaactcgcgcatatgatcagttgggcgtgacttaagtcac 1887921  T
Q  286 gcagag 291  Q
    ||||||    
T  1887920 gcagag 1887915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 335 - 400
Target Start/End: Complemental strand, 43837572 - 43837507
Alignment:
Q  335 gcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||| ||||    
T  43837572 gcgcaagggcatttttggcatggctgcagggcgcgagcaaaatgtgcagggtgaagagcagtattc 43837507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 187 - 314
Target Start/End: Complemental strand, 6728720 - 6728592
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||| ||| |||||||| | ||||||||||||| ||||  |||||||||||||||||||| ||||||||  | ||||||||||    
T  6728720 tgactaccgtccaagaaacgtctgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcacggcttaagtcac 6728621  T
Q  286 gcagaggttacaaggtgcgcaagttaagt 314  Q
     || || ||   ||||||||| |||||||    
T  6728620 acatagattgtgaggtgcgcatgttaagt 6728592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 21083869 - 21083765
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| |||||||| | ||||||||||||| ||||  |||||||| ||||| ||||| ||| ||  ||||||||||||||    
T  21083869 tgactaccgtccaagaaacgtttgtgcttcagtttt-accaccggccaacttgcgcaagttaacttgcgcagaggctcagttgtaagtgacttaagtcac 21083771  T
Q  286 gcagag 291  Q
    ||||||    
T  21083770 gcagag 21083765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 42242082 - 42242151
Alignment:
Q  331 acttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    ||||||||||||| ||||||| || ||||||||||||||| |||||||||| | ||||||||||| ||||    
T  42242082 acttgcgcaagggtatttttggcacggctgcagggcgcgagcaaaatgtgcagggtgaagagcagtattc 42242151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 328 - 400
Target Start/End: Complemental strand, 5813728 - 5813656
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||||| ||||| ||||||||| ||||||| ||||||| |||||| |||||||||| ||||||||||| ||||    
T  5813728 ttaactagcgcaggggcattttggacatggttgcagggtgcgatcgaaatgtgctgggtgaagagcagaattc 5813656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 20149424 - 20149493
Alignment:
Q  23 gggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgg 97  Q
    ||||||||||||||||||||     |||||| ||||||||||||| ||||||| |||||| ||||||||||||||    
T  20149424 gggagagagtgaggagggga-----gtgagaaggtgtgaggaaatggggaagtttggaggggtatttataggtgg 20149493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 11815554 - 11815454
Alignment:
Q  300 gtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcatt 399  Q
    |||||||||||||| |||||||| || ||||||||||||||||| | ||| | ||  |||||||||||||| | |||  || || ||||||||||| |||    
T  11815554 gtgcgcaagttaagacacgcagcgtgtcttaacttgcgcaagggtaatttaggcaacgctgcagggcgcgagcgaaaactgatgggtgaagagcagaatt 11815455  T
Q  400 c 400  Q
    |    
T  11815454 c 11815454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 37891823 - 37891765
Alignment:
Q  230 ggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgc 287  Q
    |||||||  ||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  37891823 ggccaactagcgtgagttaactcgcgctaaggctcagtggtgcgtgacttaagtcacgc 37891765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 28030532 - 28030427
Alignment:
Q  294 tacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagc 393  Q
    ||||| |||||||||||||| |||   || |||||||||||||||| ||| | ||| | ||  |||||||||||||| | ||| |||||| |||||||||    
T  28030532 tacaacgtgcgcaagttaagacacattgcgtgacttaacttgcgcaggggtaatttaggcaacgctgcagggcgcgagcgaaaagtgctgggtgaagagc 28030433  T
Q  394 agcatt 399  Q
    | ||||    
T  28030432 aacatt 28030427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 26257775 - 26257866
Alignment:
Q  202 aaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtgg-tgcgtgacttaagtcacgcagag 291  Q
    |||||||||| |||||||| | ||||||| | ||| ||||  |||||||| ||||| ||||| ||||| || ||||||||||||||||||||    
T  26257775 aaacgtttgtgcttcagtttttaccaccgtctaacttgcgcaagttaacttgcgcagaggctcagtggatgtgtgacttaagtcacgcagag 26257866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 2195153 - 2195218
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcg 253  Q
    |||||||||||||||| |||||||||||| |||| | |||| |||| ||| |||| |||||||||||    
T  2195153 tgaccaccgtccaaaa-acgtttgttctttagtttttaccatcggctaacttgcgcgagttaactcg 2195218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 16710088 - 16710174
Alignment:
Q  43 agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggttataaccaccataaat 129  Q
    |||| |||||||||||||||||||| || |||| | |||| ||||||||||| ||  || |||  |||||||||| | |||||||||    
T  16710088 agaatgtgagatggtgtgaggaaatgggaaagtttagaggtgtatttatagggggagattgtaacgtaggttatatctaccataaat 16710174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 42121781 - 42121872
Alignment:
Q  159 aaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactc 252  Q
    ||||| ||| ||||||| |||||||| |||||| |   |||||||| ||||||||||||||||||  || ||||||||  ||| ||||||||||    
T  42121781 aaaacatgtagattgaatgttgaaaaactgaccgcataccaaaaaatgtttgttcttcagttctg--catcggccaactggcgcgagttaactc 42121872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 16710243 - 16710335
Alignment:
Q  241 gtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    ||||||||||||| ||| | |  ||||||||||||||||| |||||||||   || ||| ||||  |||||||||| || || ||||||||||    
T  16710243 gtgagttaactcgtgcacatgtcagtggtgcgtgacttaactcacgcagaacatataagatgcgttagttaagtcatgctgcgtgacttaact 16710335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 328 - 400
Target Start/End: Complemental strand, 32734006 - 32733934
Alignment:
Q  328 ttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||||||||||||||| ||||||||| ||| || | || |||| ||||||||||   ||||||||||| ||||    
T  32734006 ttaacttgcgcaagggtatttttgacttggttgtaaggtgcgagcaaaatgtgcatggtgaagagcagaattc 32733934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 12 - 256
Target Start/End: Original strand, 15 - 258
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||| | |||    
T  15 agagaaatagagggagagagtgaggagggggagaaagtgatatggtgtgaggaattaggtaagtatggaggggtatttataggtgggaatggtaatatag 114  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagt-ttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttg 210  Q
    ||  ||| |||||| ||||||||         ||||||| |  |||| |||||||||| |||||| |||||||| |||||||| | | ||||||||||||    
T  115 gtcgtaaacaccattaatgtggtaaaaaaaaggtgtaaaatagtgtaaaaaacgtgtgaattgaatgttgaaaaactgaccacagactaaaaaacgtttg 214  T
Q  211 ttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgc 256  Q
    |||||||||||||  |||||||||||  | ||||||||||||||||    
T  215 ttcttcagttctg--caccggccaactagtgtgagttaactcgcgc 258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 12 - 394
Target Start/End: Original strand, 3521 - 3918
Alignment:
Q  12 agagaaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtag 111  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| |||    
T  3521 agagaaatagagggagagagtaaggaggaggagaaagtgagatggtgtgaggaattagggaagtatggaggggtatttataggt-ggaatggtagtatag 3619  T
Q  112 gttataaccaccataaatgtggtcnnnnnnncgtgtaaagtttg-tagaaaacgtgtggattgaaggttgaaaacctgacc-------------acc--- 194  Q
    ||| |||  ||||| |||||||||       | |||||| |||| |  |||||||||||| |||| |||||||| ||||||             |||       
T  3620 gttttaaataccattaatgtggtc-aaaaaacatgtaaaatttgatgaaaaacgtgtggaatgaatgttgaaaaactgaccaaatgaaaaactgaccaaa 3718  T
Q  195 gtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacgcagaggtt 294  Q
    | ||||||||||||||||||| || | |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||  || || ||    
T  3719 gaccaaaaaacgtttgttctttagctttgaccaccggccaaggtgcgtgagttaactcgcgcataggccagtggtgtgtgacttaagtcagacaaagctt 3818  T
Q  295 acaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagca 394  Q
    | |||||| |  || |||||||||  |||||||||||||   |||||||||| ||||  |||  |||||||| ||| | |||| ||||| ||| ||||||    
T  3819 ataaggtgtgttagctaagtcacgttgcatgacttaactaatgcaagggcatatttggaatgcttgcagggcacgagcgaaatatgctgggtgtagagca 3918  T

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Target: scaffold0223 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 16 - 286
Target Start/End: Original strand, 15896 - 16168
Alignment:
Q  16 aaatagagggagagagtgaggaggggaagaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtaggtta 115  Q
    |||||| |||||||||||| |||| || ||| ||||||||||||||||||||  |||||| || ||| |||||||||||||||||||||||| |||||||    
T  15896 aaatagggggagagagtgaagaggaga-gaatgtgagatggtgtgaggaaatgaggaagtttgaaggggtatttataggtgggaatggtagtataggtta 15994  T
Q  116 taaccaccataaatgtggtcnnnnnnn--cgtgtaaagtttgtagaaaacgtgtggattgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttc 213  Q
    |||| ||||||| |||  |          | ||||||| ||||| |||| |||| |||||||||||||||| ||||| |  ||||||||||||| ||||     
T  15995 taactaccataagtgtaataaaaaaaaaacatgtaaaggttgtaaaaaatgtgtagattgaaggttgaaaagctgactaaagtccaaaaaacgtgtgttt 16094  T
Q  214 ttcagttctgacca-ccggccaacgtgcgtgagttaactcgcgcataggctagtggtgcgtgacttaagtcacg 286  Q
    || || |||||||| ||||||||| ||||||||||||| |||||| |||| | ||| |||||||||||||||||    
T  16095 ttgagctctgaccaaccggccaacctgcgtgagttaacacgcgcacaggccactggagcgtgacttaagtcacg 16168  T

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Target: scaffold0217 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 170 - 333
Target Start/End: Complemental strand, 25717 - 25553
Alignment:
Q  170 attgaaggttgaaaacctgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtgg 268  Q
    |||||| ||||||||||||| ||  ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||||    
T  25717 attgaatgttgaaaacctgatcaaagtgaaaaaaacgtttgttcttcagttctgaccaccggccaacttgcgtgagttaactcgcgcaaaggctgggtgg 25618  T
Q  269 tgcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaact 333  Q
    | |||| ||||||||||||| || ||| |||||| |  | |||| ||||||||| ||||||||||    
T  25617 tacgtgccttaagtcacgcatagattataaggtgtgtgaattaaatcacgcagcgtgacttaact 25553  T

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Target: scaffold0753 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0753
Description:

Target: scaffold0753; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 4088 - 3995
Alignment:
Q  199 aaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcacgcagag 291  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  4088 aaaaaacgtttgttcttcagttctgaccaccggtcaacttgcgtgagttaactcgcggaaaggctcagtggtgcgtgacttaagtcacgcagag 3995  T

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Target: scaffold0051 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 20195 - 20060
Alignment:
Q  187 tgaccaccgtccaaaaaacgtttgttcttcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggct-agtggtgcgtgacttaagtcac 285  Q
    |||| ||||||||| |||||||||| ||||| || | ||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  20195 tgactaccgtccaagaaacgtttgtgcttcaatttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacttaagtcac 20096  T
Q  286 gcagaggttacaaggtgcgcaagttaagtcacgcag 321  Q
    ||| || ||   |||||||  |||||| ||||||||    
T  20095 gcaaagcttgtgaggtgcgtgagttaactcacgcag 20060  T

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Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 21114 - 21178
Alignment:
Q  336 cgcaagggcatttttgacatggctgcagggcgcgatcaaaatgtgctgagtgaagagcagcattc 400  Q
    |||| ||||||||| || |||||||||||  |||| | |||||||||| ||||||||||| ||||    
T  21114 cgcatgggcattttggatatggctgcaggatgcgagcgaaatgtgctgggtgaagagcagaattc 21178  T

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Target: scaffold1700 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1700
Description:

Target: scaffold1700; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 941 - 1020
Alignment:
Q  18 atagagggagagagtgaggagggga---agaaagtgagatggtgtgaggaaatagggaagtatggaggagtatttatagg 94  Q
    |||| ||||||||||||||||| ||   |||| |||||||| ||||||||||| ||||||| | |||| |||||||||||    
T  941 atagggggagagagtgaggaggagagtgagaatgtgagatgttgtgaggaaatggggaagtttagaggtgtatttatagg 1020  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 370
Target Start/End: Original strand, 232408 - 232508
Alignment:
Q  270 gcgtgacttaagtcacgcagaggttacaaggtgcgcaagttaagtcacgcagcatgacttaacttgcgcaagggcatttttgacatggctgcagggcgcg 369  Q
    ||||||||||||||||||| |   ||||| ||| |  ||||||||||||| || ||||||||||  |||||| | | ||| | |||||||||||||||||    
T  232408 gcgtgacttaagtcacgcataaaatacaacgtgtgttagttaagtcacgctgcgtgacttaactaacgcaagagtaatttaggcatggctgcagggcgcg 232507  T
Q  370 a 370  Q
    |    
T  232508 a 232508  T

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Target: scaffold1212 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1212
Description:

Target: scaffold1212; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 343
Target Start/End: Original strand, 1801 - 1836
Alignment:
Q  308 gttaagtcacgcagcatgacttaacttgcgcaaggg 343  Q
    ||||||||||||||| ||||||||||||||||||||    
T  1801 gttaagtcacgcagcgtgacttaacttgcgcaaggg 1836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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