View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12073_high_26 (Length: 281)
Name: NF12073_high_26
Description: NF12073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12073_high_26 |
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Alignment Details
Target: chr6 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 674748 - 674928
Alignment:
| Q |
1 |
agactctgtcatcatcattatttcattcaataatctnnnnnnntccaaggataaaatcgtaattcttcatctcaaaattcatagagcgggagttagagcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
674748 |
agactctgtcatcatcattatttcattcaataatataaaaaaatccaaggttaaaatcgtaattcttcatctcaaaattcatagagcgggaattagagcc |
674847 |
T |
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| Q |
101 |
gttgcttctcaattcaatgaaattttcgcgccaaattttcatttcccacttgccctgcccgtaaattctcggtcagcccct |
181 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
674848 |
gttgcttctcaattcaatgaaattttcgcgccaaattttcatttcccacttgccctgcccgtaaattctcggtcagaccct |
674928 |
T |
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