View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12075_high_9 (Length: 273)
Name: NF12075_high_9
Description: NF12075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12075_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 46786266 - 46786510
Alignment:
| Q |
18 |
gaataaagaacagatagtttacgtttcaataatttgtgatggtgtgtagttggatagtatctgcagtnnnnnnngcatgaaggttaaaaatgaactaatt |
117 |
Q |
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| T |
46786266 |
gaataaagaacagatggtttacgtttcaataatttgtgatggtgtgtagttggatagtatctgcagtaaaaaaagcatgaaggttaaaaatgaactgatt |
46786365 |
T |
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| Q |
118 |
acacgttactatgctgtatatgatgtgtggtagtgaataggaaaaagaatgagagtgagtttaagaagtaagttactaagtagtacctggtatgcttgaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46786366 |
acacgttactatgctgtatatgatgtgtggtagtgaataggaaaaagaataagagtgagtttaagaagtaagttactaagtagtacctggtatgcttgaa |
46786465 |
T |
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| Q |
218 |
ttacacggcgaatcataacatcagaatatgtttcattttcatctc |
262 |
Q |
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| T |
46786466 |
ttacacggcgaatcataacatcagaatatgtttcattttcatctc |
46786510 |
T |
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