View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12080_high_46 (Length: 228)
Name: NF12080_high_46
Description: NF12080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12080_high_46 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 26351624 - 26351426
Alignment:
| Q |
20 |
tggctgagtattgaggagtatcaaccaccactaacaactatgtgctttttctgctaacttcaataaacaaacgtgttagaacaaaagatagttgactatt |
119 |
Q |
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| T |
26351624 |
tggctgagtattgaggagtatcaaccaccactaacaactatgtgctttttctgctaacttcaataaacaaacgtgttagaacaaaagagagttgactatt |
26351525 |
T |
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| Q |
120 |
tgataaggttgtgtttgagctttagagatctgaggttgtggaaagaaaggattataaaaatgggtgtgaatgttaatgtgaggattctttgtgtctgtg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26351524 |
tgataaggttgtgtttgagctttagagatctgaggttgtggaaagaaaggattataaaaatgggtgtgaatgttaatgtgaggattctttgtgtttgtg |
26351426 |
T |
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