View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12080_low_22 (Length: 390)
Name: NF12080_low_22
Description: NF12080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12080_low_22 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 326; Significance: 0; HSPs: 19)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 15 - 376
Target Start/End: Complemental strand, 39493133 - 39492772
Alignment:
| Q |
15 |
atgaagtggaattttcttacaccttgaaggttttgtcaagaatcttatcaagcaacggcaatataatgaagctgtcagattcagccgcgtatataacttc |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
39493133 |
atgaagtggaattttcttacaccttgcaggttttgtcaagaatcttatcaagcaacggcaatatgatgaagctgtcagattcagccgtgtatataacttc |
39493034 |
T |
 |
| Q |
115 |
agcgacaataatcaactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaatta |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39493033 |
agcgacaataatcaactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaatta |
39492934 |
T |
 |
| Q |
215 |
aggnnnnnnnncttattcggtttctattttatgaaatattccatcttcataccccttcatgaatcatgatagttataaataatttgaatatgaactcagg |
314 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39492933 |
aggttttttttcttattcggtttctattttatgaaatattccatcttcataccccttcatgaatcatgatagttataaataatttgaatatgaactcagg |
39492834 |
T |
 |
| Q |
315 |
acaaggccagagatcaagaagttgctagtctcaaagctgttctacagtgcattatagataac |
376 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39492833 |
acaaggccagagatcaagaagttgctagtctcaaagctgttctacagtgcattatagataac |
39492772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 24 - 376
Target Start/End: Original strand, 39131280 - 39131632
Alignment:
| Q |
24 |
aattttcttacaccttgaaggttttgtcaagaatcttatcaagcaacggcaatataatgaagctgtcagattcagccgcgtatataacttcagcgacaat |
123 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||||| ||||| || |||||| ||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
39131280 |
aattttcttacaccttgcagattttgtcgagaatcttttcaagagacagcaatacgatgaagctgtcagattcagtcgtgtatataacttcagcgacaat |
39131379 |
T |
 |
| Q |
124 |
aatcaactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaattaagg------ |
217 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||| |
|
|
| T |
39131380 |
aatcaactatttggtctctttgaagaacatgtgcagaatctaaagctaatttctgagagtacttgcaaggaaactaactccattgaaattaaggttcatt |
39131479 |
T |
 |
| Q |
218 |
nnnnnnnncttattcggtttctattttatgaaatattcc-atcttcataccccttcatgaatcatgatagttataaataatttgaatatgaactcaggac |
316 |
Q |
| |
|
||||||| ||| |||||||||||| ||||| || |||||| |||| |||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
39131480 |
atttttttcttattcaatttttattttatgaaaaattccaattttcataaccct-------tcatgatagttataaatactttgaatgtgaactcaggac |
39131572 |
T |
 |
| Q |
317 |
aaggccagagatcaagaagttgctagtctcaaagctgttctacagtgcattatagataac |
376 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| |
|
|
| T |
39131573 |
aaggccagagatcaagaagttgcttgtctcatagctgttctacaatgcattatagataac |
39131632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 42 - 376
Target Start/End: Original strand, 39469106 - 39469437
Alignment:
| Q |
42 |
aggttttgtcaagaatcttatcaagcaacggcaatataatgaagctgtcagattcagccgcgtatataacttcagcgacaataatcaactagttgatctc |
141 |
Q |
| |
|
||||||||| |||||||||||||| || ||||| |||||||||| ||||| || | | |||||||||||| ||| |||||||||||||||||| |
|
|
| T |
39469106 |
aggttttgttgagaatcttatcaagagacaagaatatgatgaagctgttagatttagtcatgcgtataacttcagcaacagtaatcaactagttgatcta |
39469205 |
T |
 |
| Q |
142 |
tttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaattaagg---nnnnnnnncttattcggtttc |
238 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
39469206 |
ttcgaagagcatgtgcagaatctaaaactaatttctgagagcatttgcaagggaaccaactccattgaaattaaggttctttgttttcttattcaatttc |
39469305 |
T |
 |
| Q |
239 |
tattttatgaaata-ttccatcttcataccccttcatgaatcatgatagttataaataatttgaatatgaactcaggacaaggccagagatcaagaagtt |
337 |
Q |
| |
|
|||||||||||| | ||| |||||||||| ||| |||| |||||||||| || ||||||| ||||||||||| ||||| | ||||||||||||| |
|
|
| T |
39469306 |
tattttatgaaacatttcaatcttcatactcct-------tcataatagttataagtactttgaatgtgaactcaggaaaaggctaaagatcaagaagtt |
39469398 |
T |
 |
| Q |
338 |
gctagtctcaaagctgttctacagtgcattatagataac |
376 |
Q |
| |
|
|||||||||| ||||||||||| |||||| |||||||| |
|
|
| T |
39469399 |
gctagtctcattgctgttctacaatgcattgtagataac |
39469437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 39125284 - 39125471
Alignment:
| Q |
27 |
tttcttacaccttgaaggttttgtcaagaatcttatcaagcaacggcaatataatgaagctgtcagattcagccgcgtatataacttcagcgacaataat |
126 |
Q |
| |
|
||||||| |||||| || ||||||| |||||||||||||| || ||||||| |||||||||| |||||||| || | ||||||||||||| || ||||| |
|
|
| T |
39125284 |
tttcttaaaccttgcagtttttgtcgagaatcttatcaagagacagcaatatgatgaagctgttagattcagtcgtgcatataacttcagcaacgataat |
39125383 |
T |
 |
| Q |
127 |
caactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaattaa |
215 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |
|
|
| T |
39125384 |
caactagctgatctctttgaagaacatgtgca-aatctaaaactaatttctgagagcaattgcaaggaaaccgactctattgaaattaa |
39125471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 25 - 360
Target Start/End: Original strand, 39145159 - 39145483
Alignment:
| Q |
25 |
attttcttacaccttgaaggttttgtcaagaatcttatcaagcaacggcaatataatgaagctgtcagattcagccgcgtatataacttcagcgacaata |
124 |
Q |
| |
|
|||||||| ||||| | || |||||| ||| |||||||||| || ||||||| |||||||||| |||||||| | | ||||||||||||| |||||| |
|
|
| T |
39145159 |
attttcttgcacctagcagattttgtacagagtcttatcaagagacagcaatatgatgaagctgttagattcagttgtgcatataacttcagcaacaata |
39145258 |
T |
 |
| Q |
125 |
atcaactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaattaaggnnnnnnn |
224 |
Q |
| |
|
||| ||||||||| ||||| |||||||||||||||||||||| |||| | |||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
39145259 |
ctcagctagttgatatctttcaagaacatgtgcagaatctaaatttaatctttgagagcagttgcaaggaagccaactccattgaaattaaggtcttt-- |
39145356 |
T |
 |
| Q |
225 |
ncttattcggtttctattttatgaaatattccatcttcataccccttcatgaatcatgatagttataaataatttgaatatgaactcaggacaaggccag |
324 |
Q |
| |
|
|| ||| ||| ||||||||||| |||||||||||||||| | |||| |||||||||||| |||||| |||||| ||||| || ||| | |
|
|
| T |
39145357 |
--tttttcttattcaattttatgaaacattccatcttcataccatt-------tcatcgtagttataaatactttgaacatgaacacaggataaagcctg |
39145447 |
T |
 |
| Q |
325 |
agatcaagaagttgctagtctcaaagctgttctaca |
360 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||| |
|
|
| T |
39145448 |
agatcaagagattgctagtctcggagctgttctaca |
39145483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 39188388 - 39188196
Alignment:
| Q |
25 |
attttcttacaccttgaaggttttgtcaagaatcttatcaagcaacggcaatataatgaagctgtcagattcagccgcgtatataacttcagcgacaata |
124 |
Q |
| |
|
|||||||| ||||| | || |||||| ||| |||||||||| ||| ||||||| |||||||||| |||||||| | | ||||||||||||| |||||| |
|
|
| T |
39188388 |
attttcttgcacctggcagattttgtacagagtcttatcaagaaacagcaatatgatgaagctgttagattcagttgtgcatataacttcagcaacaata |
39188289 |
T |
 |
| Q |
125 |
atcaactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaattaagg |
217 |
Q |
| |
|
||| ||||||||| ||||| |||||||||||||||||||||| |||| | |||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
39188288 |
ctcagctagttgatatctttcaagaacatgtgcagaatctaaatttaatctttgagagcagttgcaaggaagccaactccattgaaattaagg |
39188196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 108 - 376
Target Start/End: Complemental strand, 39425253 - 39424992
Alignment:
| Q |
108 |
taacttcagcgacaataatcaactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccatt |
207 |
Q |
| |
|
|||||| ||| ||||||||||| ||||||||||||| |||||||||||||||| |||||| ||||||||||| | ||||| | ||||||||||||| |
|
|
| T |
39425253 |
taacttgagcaacaataatcaattagttgatctcttgcgagaacatgtgcagaatgcaaaactgatttctgagagtacttgcatgaaaaccaactccatc |
39425154 |
T |
 |
| Q |
208 |
gaaattaagg--nnnnnnnncttattcggtttctattttatgaaatattccatcttcataccccttcatgaatcatgatagttataaataatttgaatat |
305 |
Q |
| |
|
|||||||||| ||||||| || |||||||||||| |||||||||||| |||| | |||| ||||||||||||| |||||| | |
|
|
| T |
39425153 |
gaaattaaggttctttttttcttattcaatt--tattttatgaaacattccatcttcacaccctt-------tcataatagttataaatactttgaactt |
39425063 |
T |
 |
| Q |
306 |
gaactcaggacaaggccagagatcaagaagttgctagtctcaaagctgttctacagtgcattatagataac |
376 |
Q |
| |
|
| || ||||| || |||| |||||||||| ||||||||||| ||||||| ||||||| ||| ||||||| |
|
|
| T |
39425062 |
gtacacaggaaaaagccatagatcaagaaattgctagtctcgaagctgtagtacagtgtattggagataac |
39424992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 39372297 - 39372395
Alignment:
| Q |
119 |
acaataatcaactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaattaagg |
217 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||||| || |||||| ||||| |||| |||| ||| ||||||| ||||||||||||||||||| |||| |
|
|
| T |
39372297 |
acaagaataaactagttgatctcttgcaagaacacgtccagaatgccaaactgatttgtgagggcagttgcaagaaaaccaactccattgaaatcaagg |
39372395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 367
Target Start/End: Original strand, 39372498 - 39372560
Alignment:
| Q |
305 |
tgaactcaggacaaggccagagatcaagaagttgctagtctcaaagctgttctacagtgcatt |
367 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||| | | ||||||| ||||||||| |
|
|
| T |
39372498 |
tgaactcaggataaggccagagatcaagaaattgctagtctgagaactgttctgcagtgcatt |
39372560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 39224818 - 39224910
Alignment:
| Q |
125 |
atcaactagttgatctctttgaagaacatgtgcagaatctaaaactaatttctgagagcatttgcaaggaaaccaactccattgaaattaagg |
217 |
Q |
| |
|
||||| |||||||| | || |||||||||| |||||| ||||| |||| |||||||| ||||||| ||||||||||||||||||| |||| |
|
|
| T |
39224818 |
atcaattagttgatatgttgcaagaacatgtccagaatgccaaacttatttgtgagagcagttgcaagaaaaccaactccattgaaatcaagg |
39224910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 376
Target Start/End: Original strand, 39125492 - 39125643
Alignment:
| Q |
226 |
cttattcggtttctattttatgaaatattccatcttcataccccttcatgaatcatgatagttataaataatttgaatatgaactca---ggacaaggcc |
322 |
Q |
| |
|
||||||| ||||||||| |||||| ||||||||||||||| ||||||||| | | ||| ||||||||| |||||| | |||| |||||||||| |
|
|
| T |
39125492 |
cttattcaatttctattt-atgaaacattccatcttcatacaccttcatga-tagttataattataaatactttgaacgttttctcatcaggacaaggcc |
39125589 |
T |
 |
| Q |
323 |
agagatcaagaagttgctagtctcaaagctgttctacagtgcattatagataac |
376 |
Q |
| |
|
|||| ||| ||||||||||||||| ||||||| | || |||| |||||||||| |
|
|
| T |
39125590 |
agaggtcaggaagttgctagtctcgtagctgttatccaatgcaatatagataac |
39125643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 39180008 - 39180048
Alignment:
| Q |
305 |
tgaactcaggacaaggccagagatcaagaagttgctagtct |
345 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
39180008 |
tgaactcaggataaggccagagatcaagaaattgctagtct |
39180048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 39225015 - 39225055
Alignment:
| Q |
305 |
tgaactcaggacaaggccagagatcaagaagttgctagtct |
345 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
39225015 |
tgaactcaggataaggccagagatcaagaaattgctagtct |
39225055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 39386102 - 39386062
Alignment:
| Q |
305 |
tgaactcaggacaaggccagagatcaagaagttgctagtct |
345 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
39386102 |
tgaactcaggataaggccagagatcaagaaattgctagtct |
39386062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 367
Target Start/End: Complemental strand, 39396016 - 39395954
Alignment:
| Q |
305 |
tgaactcaggacaaggccagagatcaagaagttgctagtctcaaagctgttctacagtgcatt |
367 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||| |||| | |||||||||| |||||| |
|
|
| T |
39396016 |
tgaactcaggataaggccagagatcaagaaattgcttgtctgggaactgttctacaatgcatt |
39395954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 2363533 - 2363630
Alignment:
| Q |
14 |
gatgaagtggaattttcttacaccttgaaggttttgtcaagaatcttatcaagcaacggcaatataatgaagctgtcagattcagccgcgtatataac |
111 |
Q |
| |
|
||||||||| ||||||| | ||||||| || |||||| |||||||||||| | | | |||||||| ||| ||||| ||||||| | ||| ||||||| |
|
|
| T |
2363533 |
gatgaagtgaaattttcctgcaccttgcagattttgttcagaatcttatcatgaagcagcaatatattgaggctgttagattcatctgcgcatataac |
2363630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 39163446 - 39163486
Alignment:
| Q |
305 |
tgaactcaggacaaggccagagatcaagaagttgctagtct |
345 |
Q |
| |
|
||||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
39163446 |
tgaactcaggataaggccagagatgaagaaattgctagtct |
39163486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 39204171 - 39204131
Alignment:
| Q |
305 |
tgaactcaggacaaggccagagatcaagaagttgctagtct |
345 |
Q |
| |
|
||||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
39204171 |
tgaactcaggataaggccagagatgaagaaattgctagtct |
39204131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 44625130 - 44625182
Alignment:
| Q |
14 |
gatgaagtggaattttcttacaccttgaaggttttgtcaagaatcttatcaag |
66 |
Q |
| |
|
||||||||| | ||||||||||||||| || |||||| |||||||||||||| |
|
|
| T |
44625130 |
gatgaagtgaatttttcttacaccttgcagattttgttgagaatcttatcaag |
44625182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 38599532 - 38599606
Alignment:
| Q |
300 |
gaatatgaactcaggacaaggccagagatcaagaagttgctagtctcaaagctgttctacagtgcattatagata |
374 |
Q |
| |
|
||||||||||||| |||||||||||| ||||| ||||||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
38599532 |
gaatatgaactcatgacaaggccagacatcaaaaagttgctagtctcatagttgttctacggtgcattatagata |
38599606 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 33563521 - 33563572
Alignment:
| Q |
166 |
aaactaatttctgagagcatttgcaaggaaaccaactccattgaaattaagg |
217 |
Q |
| |
|
||||| |||| ||||||| |||||||| ||||||||||||||||||| |||| |
|
|
| T |
33563521 |
aaactgatttgtgagagcttttgcaagaaaaccaactccattgaaatcaagg |
33563572 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 33563679 - 33563720
Alignment:
| Q |
305 |
tgaactcaggacaaggccagagatcaagaagttgctagtctc |
346 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
33563679 |
tgaattcaggataaggccagagatcaagaaattgctagtctc |
33563720 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 51577150 - 51577213
Alignment:
| Q |
282 |
gatagttataaataatttgaatatgaactcaggacaaggccagagatcaagaagttgctagtct |
345 |
Q |
| |
|
||||||||||||||| |||||| |||| |||||| || || ||||| |||||| |||||||||| |
|
|
| T |
51577150 |
gatagttataaataagttgaatgtgaattcaggataaagcaagagaccaagaaattgctagtct |
51577213 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 51577041 - 51577086
Alignment:
| Q |
172 |
atttctgagagcatttgcaaggaaaccaactccattgaaattaagg |
217 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||| |||| |
|
|
| T |
51577041 |
atttctgagagcaactgcaagaaaaccaactccattgaaatcaagg |
51577086 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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