View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12080_low_30 (Length: 318)

Name: NF12080_low_30
Description: NF12080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12080_low_30
NF12080_low_30
[»] chr1 (59 HSPs)
chr1 (40-276)||(48207341-48207577)
chr1 (41-276)||(48198759-48198994)
chr1 (50-166)||(46328798-46328914)
chr1 (40-168)||(25830495-25830623)
chr1 (40-168)||(15834282-15834410)
chr1 (40-177)||(38535391-38535530)
chr1 (40-177)||(38557609-38557748)
chr1 (40-177)||(8140098-8140235)
chr1 (40-177)||(28386694-28386831)
chr1 (40-276)||(29219934-29220159)
chr1 (50-167)||(45273400-45273517)
chr1 (40-177)||(49231806-49231943)
chr1 (40-177)||(51702416-51702553)
chr1 (40-167)||(20111827-20111958)
chr1 (40-177)||(25612914-25613051)
chr1 (40-177)||(29395673-29395810)
chr1 (40-177)||(6313398-6313535)
chr1 (40-177)||(9321755-9321892)
chr1 (40-137)||(18799274-18799370)
chr1 (215-276)||(6313562-6313623)
chr1 (215-276)||(9321667-9321728)
chr1 (215-276)||(20111729-20111790)
chr1 (215-276)||(25613078-25613139)
chr1 (215-276)||(29395585-29395646)
chr1 (60-137)||(48176718-48176795)
chr1 (215-276)||(51702580-51702641)
chr1 (215-276)||(52706366-52706427)
chr1 (215-271)||(14389400-14389456)
chr1 (215-270)||(39758861-39758916)
chr1 (215-270)||(39764215-39764270)
chr1 (215-276)||(45319453-45319514)
chr1 (215-276)||(49231970-49232031)
chr1 (40-115)||(5494427-5494501)
chr1 (215-274)||(38535306-38535365)
chr1 (215-274)||(38557524-38557583)
chr1 (163-222)||(49231886-49231945)
chr1 (163-217)||(25830489-25830543)
chr1 (219-276)||(26881863-26881920)
chr1 (215-276)||(28386606-28386667)
chr1 (215-276)||(45535735-45535796)
chr1 (215-274)||(5494307-5494366)
chr1 (163-222)||(8140096-8140155)
chr1 (163-222)||(29395671-29395730)
chr1 (163-210)||(45273470-45273517)
chr1 (215-270)||(46328952-46329007)
chr1 (215-276)||(51826008-51826069)
chr1 (163-222)||(6313478-6313537)
chr1 (163-222)||(9321753-9321812)
chr1 (163-210)||(20111827-20111874)
chr1 (163-222)||(25612994-25613053)
chr1 (163-222)||(28386692-28386751)
chr1 (163-222)||(46328868-46328927)
chr1 (163-222)||(51702496-51702555)
chr1 (169-211)||(15834282-15834324)
chr1 (215-249)||(25830425-25830459)
chr1 (163-222)||(38535389-38535448)
chr1 (163-222)||(38557607-38557666)
chr1 (215-274)||(45273547-45273606)
chr1 (174-210)||(5494403-5494439)
[»] chr6 (27 HSPs)
chr6 (40-276)||(7104335-7104571)
chr6 (40-276)||(8790059-8790295)
chr6 (40-177)||(7497912-7498049)
chr6 (40-177)||(30384307-30384444)
chr6 (40-177)||(14261686-14261823)
chr6 (40-177)||(31896459-31896596)
chr6 (40-168)||(31068245-31068373)
chr6 (40-177)||(34774207-34774344)
chr6 (215-276)||(3109397-3109458)
chr6 (215-276)||(6475790-6475851)
chr6 (215-276)||(14261598-14261659)
chr6 (215-276)||(29864799-29864860)
chr6 (215-276)||(34774371-34774432)
chr6 (215-275)||(30384220-30384280)
chr6 (215-274)||(4199637-4199696)
chr6 (215-276)||(7498076-7498137)
chr6 (215-276)||(27585232-27585293)
chr6 (215-276)||(31068406-31068467)
chr6 (215-276)||(31896623-31896684)
chr6 (163-222)||(30384305-30384364)
chr6 (163-222)||(7497992-7498051)
chr6 (163-222)||(14261684-14261743)
chr6 (40-124)||(4199756-4199840)
chr6 (163-222)||(31896539-31896598)
chr6 (163-222)||(34774287-34774346)
chr6 (163-211)||(31068325-31068373)
chr6 (215-272)||(10262853-10262910)
[»] chr4 (59 HSPs)
chr4 (40-276)||(38234414-38234650)
chr4 (40-177)||(49500775-49500912)
chr4 (40-177)||(51321678-51321815)
chr4 (50-177)||(41725938-41726065)
chr4 (40-177)||(5801527-5801664)
chr4 (40-177)||(54852719-54852856)
chr4 (40-276)||(23988019-23988244)
chr4 (40-177)||(37916613-37916750)
chr4 (40-177)||(54341969-54342106)
chr4 (40-177)||(32322892-32323028)
chr4 (40-177)||(37827671-37827808)
chr4 (40-177)||(50019014-50019150)
chr4 (40-177)||(5442216-5442352)
chr4 (40-177)||(27768887-27769023)
chr4 (40-151)||(32683296-32683407)
chr4 (215-276)||(27769050-27769111)
chr4 (215-276)||(54342133-54342194)
chr4 (50-137)||(30966350-30966437)
chr4 (215-276)||(5801691-5801752)
chr4 (215-276)||(7808976-7809037)
chr4 (215-276)||(7820927-7820988)
chr4 (219-276)||(8583048-8583105)
chr4 (215-276)||(29649177-29649238)
chr4 (40-137)||(29649295-29649392)
chr4 (215-276)||(32323055-32323116)
chr4 (219-276)||(32683182-32683239)
chr4 (215-276)||(42315860-42315921)
chr4 (215-276)||(48262061-48262122)
chr4 (215-276)||(48531968-48532029)
chr4 (40-137)||(49834122-49834219)
chr4 (215-276)||(50019177-50019238)
chr4 (163-222)||(41726008-41726067)
chr4 (163-222)||(49500773-49500832)
chr4 (214-276)||(49834020-49834082)
chr4 (163-217)||(54852722-54852776)
chr4 (219-276)||(3434874-3434931)
chr4 (215-276)||(37827583-37827644)
chr4 (215-276)||(42217495-42217555)
chr4 (215-276)||(49500687-49500748)
chr4 (215-276)||(51321842-51321903)
chr4 (170-222)||(50019100-50019152)
chr4 (163-222)||(5442295-5442354)
chr4 (163-222)||(5801607-5801666)
chr4 (163-222)||(32322971-32323030)
chr4 (163-222)||(37916693-37916752)
chr4 (163-222)||(51321758-51321817)
chr4 (163-222)||(54342049-54342108)
chr4 (215-276)||(5442379-5442438)
chr4 (215-276)||(41726092-41726153)
chr4 (213-270)||(53272823-53272880)
chr4 (215-271)||(56399018-56399074)
chr4 (163-222)||(27768966-27769025)
chr4 (40-115)||(28484722-28484797)
chr4 (163-217)||(37827674-37827728)
chr4 (215-276)||(37916778-37916844)
chr4 (214-276)||(52110237-52110299)
chr4 (215-276)||(30966232-30966293)
chr4 (214-271)||(25936902-25936959)
chr4 (137-177)||(49834092-49834132)
[»] chr7 (82 HSPs)
chr7 (40-274)||(46035499-46035733)
chr7 (40-269)||(26182915-26183134)
chr7 (40-177)||(3023747-3023884)
chr7 (40-177)||(18839116-18839253)
chr7 (40-166)||(29893778-29893904)
chr7 (40-177)||(12741195-12741332)
chr7 (40-168)||(44256020-44256148)
chr7 (40-167)||(33383463-33383590)
chr7 (40-166)||(29586334-29586460)
chr7 (40-177)||(30823451-30823588)
chr7 (40-177)||(47067522-47067659)
chr7 (50-177)||(40459968-40460095)
chr7 (40-177)||(32884574-32884712)
chr7 (40-177)||(7993978-7994115)
chr7 (40-177)||(28343132-28343269)
chr7 (40-144)||(39028908-39029012)
chr7 (183-274)||(12893159-12893250)
chr7 (40-167)||(37971635-37971761)
chr7 (40-177)||(510468-510605)
chr7 (40-177)||(23102113-23102250)
chr7 (40-177)||(33891482-33891619)
chr7 (40-276)||(29613952-29614178)
chr7 (50-167)||(8676165-8676282)
chr7 (40-137)||(44121225-44121322)
chr7 (90-177)||(9881535-9881622)
chr7 (215-276)||(35089144-35089205)
chr7 (40-104)||(12894404-12894468)
chr7 (163-276)||(30823531-30823634)
chr7 (215-276)||(510632-510693)
chr7 (215-276)||(12252433-12252494)
chr7 (215-276)||(23102277-23102338)
chr7 (215-276)||(28343296-28343357)
chr7 (215-276)||(33475515-33475576)
chr7 (215-276)||(43056735-43056796)
chr7 (215-276)||(47912571-47912632)
chr7 (215-274)||(3023911-3023970)
chr7 (214-276)||(37971553-37971615)
chr7 (215-276)||(152839-152900)
chr7 (215-276)||(7994142-7994203)
chr7 (215-276)||(9881447-9881508)
chr7 (215-276)||(12741359-12741420)
chr7 (215-276)||(18839280-18839341)
chr7 (215-276)||(27417695-27417756)
chr7 (215-276)||(30111771-30111832)
chr7 (215-276)||(32884739-32884800)
chr7 (163-222)||(3023827-3023886)
chr7 (163-222)||(12741275-12741334)
chr7 (163-222)||(18839196-18839255)
chr7 (163-222)||(40459966-40460025)
chr7 (99-177)||(28034333-28034411)
chr7 (215-269)||(33383627-33383681)
chr7 (215-269)||(33891401-33891455)
chr7 (40-137)||(21068188-21068285)
chr7 (215-276)||(29893942-29894003)
chr7 (215-276)||(39785082-39785143)
chr7 (170-222)||(32884662-32884714)
chr7 (170-222)||(47067609-47067661)
chr7 (163-222)||(7994058-7994117)
chr7 (163-222)||(9881533-9881592)
chr7 (170-276)||(28034287-28034383)
chr7 (163-222)||(33891480-33891539)
chr7 (215-274)||(37328812-37328871)
chr7 (163-210)||(37971635-37971682)
chr7 (214-269)||(44255946-44256001)
chr7 (163-217)||(44256014-44256068)
chr7 (50-137)||(48136527-48136616)
chr7 (215-276)||(39029039-39029100)
chr7 (215-276)||(48136409-48136470)
chr7 (163-222)||(510548-510607)
chr7 (163-222)||(23102193-23102252)
chr7 (163-222)||(28343212-28343271)
chr7 (215-276)||(40459881-40459941)
chr7 (214-276)||(42677294-42677356)
chr7 (215-249)||(47067686-47067720)
chr7 (215-276)||(34114588-34114649)
chr7 (163-222)||(29893858-29893917)
chr7 (163-210)||(33383543-33383590)
chr7 (40-134)||(39784928-39785022)
chr7 (215-249)||(44121134-44121168)
chr7 (215-276)||(21068342-21068403)
chr7 (223-276)||(30889186-30889239)
chr7 (170-222)||(29586421-29586473)
[»] scaffold0042 (3 HSPs)
scaffold0042 (40-177)||(57305-57442)
scaffold0042 (215-273)||(57220-57278)
scaffold0042 (163-222)||(57303-57362)
[»] chr3 (97 HSPs)
chr3 (40-177)||(10728262-10728399)
chr3 (40-177)||(20833719-20833856)
chr3 (40-177)||(26108129-26108266)
chr3 (40-177)||(31645499-31645636)
chr3 (50-166)||(44905103-44905219)
chr3 (40-167)||(51737013-51737140)
chr3 (40-177)||(18750455-18750592)
chr3 (40-177)||(34483340-34483477)
chr3 (40-166)||(38683439-38683566)
chr3 (40-177)||(37455660-37455797)
chr3 (40-137)||(44707785-44707882)
chr3 (40-177)||(52617222-52617359)
chr3 (50-177)||(17947050-17947177)
chr3 (59-177)||(27239466-27239584)
chr3 (40-177)||(39841691-39841828)
chr3 (40-167)||(54629672-54629799)
chr3 (40-168)||(36673404-36673532)
chr3 (40-177)||(10661009-10661146)
chr3 (40-137)||(23752669-23752766)
chr3 (75-177)||(50902596-50902698)
chr3 (40-177)||(40897943-40898070)
chr3 (215-276)||(52617134-52617195)
chr3 (40-151)||(11432368-11432479)
chr3 (40-115)||(52811172-52811247)
chr3 (215-276)||(18750619-18750680)
chr3 (215-276)||(23360555-23360616)
chr3 (215-276)||(23367395-23367456)
chr3 (215-276)||(23752551-23752612)
chr3 (215-276)||(30589823-30589884)
chr3 (215-276)||(31645411-31645472)
chr3 (215-276)||(34483252-34483313)
chr3 (215-276)||(36054057-36054118)
chr3 (215-276)||(36673307-36673368)
chr3 (215-276)||(44905004-44905065)
chr3 (215-276)||(45254602-45254663)
chr3 (40-137)||(45254720-45254817)
chr3 (215-276)||(46223353-46223414)
chr3 (40-137)||(48379972-48380069)
chr3 (56-137)||(50761389-50761470)
chr3 (215-274)||(39039062-39039121)
chr3 (213-276)||(44707921-44707984)
chr3 (217-276)||(50902469-50902528)
chr3 (214-276)||(45214131-45214193)
chr3 (215-268)||(2124760-2124813)
chr3 (215-276)||(10728174-10728235)
chr3 (215-276)||(11432533-11432594)
chr3 (215-276)||(26556845-26556906)
chr3 (215-276)||(50761271-50761332)
chr3 (215-276)||(50899493-50899554)
chr3 (215-276)||(51736915-51736976)
chr3 (215-276)||(54629836-54629897)
chr3 (215-271)||(23697949-23698005)
chr3 (215-271)||(23716404-23716460)
chr3 (215-271)||(23734860-23734916)
chr3 (215-274)||(17947204-17947263)
chr3 (163-222)||(20833799-20833858)
chr3 (163-222)||(39841689-39841748)
chr3 (215-270)||(50902514-50902569)
chr3 (40-167)||(39038902-39039025)
chr3 (219-273)||(52811371-52811425)
chr3 (215-276)||(10661173-10661234)
chr3 (215-276)||(24149884-24149945)
chr3 (215-268)||(38628875-38628928)
chr3 (215-276)||(39841603-39841664)
chr3 (219-271)||(19551205-19551257)
chr3 (215-271)||(23754523-23754579)
chr3 (163-222)||(10728260-10728319)
chr3 (163-222)||(17947120-17947179)
chr3 (163-222)||(18750535-18750594)
chr3 (163-222)||(26108209-26108268)
chr3 (163-222)||(27239464-27239523)
chr3 (163-222)||(31645497-31645556)
chr3 (163-222)||(34483338-34483397)
chr3 (215-274)||(48380126-48380185)
chr3 (171-222)||(50902594-50902645)
chr3 (102-177)||(52811266-52811341)
chr3 (163-210)||(54629752-54629799)
chr3 (42-124)||(52023176-52023258)
chr3 (215-276)||(20833884-20833945)
chr3 (215-276)||(26292611-26292671)
chr3 (170-222)||(37455747-37455799)
chr3 (163-222)||(10661089-10661148)
chr3 (215-270)||(34290220-34290275)
chr3 (163-210)||(51737013-51737060)
chr3 (163-222)||(52617220-52617279)
chr3 (163-222)||(52811284-52811343)
chr3 (163-217)||(36673398-36673452)
chr3 (171-276)||(40898021-40898115)
chr3 (163-209)||(44905103-44905149)
chr3 (214-276)||(46251246-46251308)
chr3 (215-268)||(26004904-26004957)
chr3 (215-276)||(53183126-53183187)
chr3 (215-274)||(27239375-27239439)
chr3 (215-274)||(5493033-5493092)
chr3 (163-210)||(39038978-39039025)
chr3 (215-244)||(37455824-37455853)
chr3 (181-222)||(50761357-50761398)
[»] chr2 (57 HSPs)
chr2 (40-177)||(13832804-13832941)
chr2 (40-177)||(25288977-25289114)
chr2 (40-177)||(43079302-43079439)
chr2 (51-177)||(214716-214842)
chr2 (40-177)||(3575666-3575803)
chr2 (56-177)||(28739267-28739388)
chr2 (40-177)||(28845400-28845537)
chr2 (40-177)||(3464425-3464562)
chr2 (40-177)||(10658253-10658390)
chr2 (40-177)||(33136416-33136553)
chr2 (40-168)||(379751-379879)
chr2 (40-177)||(18178094-18178231)
chr2 (40-177)||(26789607-26789744)
chr2 (40-177)||(7027726-7027863)
chr2 (40-137)||(6223860-6223956)
chr2 (215-276)||(45547893-45547954)
chr2 (215-276)||(7487004-7487065)
chr2 (215-276)||(13832716-13832777)
chr2 (215-276)||(18178258-18178319)
chr2 (215-276)||(25289141-25289202)
chr2 (215-276)||(26789771-26789832)
chr2 (215-276)||(29941867-29941928)
chr2 (215-276)||(7027891-7027952)
chr2 (215-276)||(28845564-28845625)
chr2 (215-276)||(33136580-33136641)
chr2 (215-271)||(6288608-6288664)
chr2 (163-222)||(214714-214773)
chr2 (163-222)||(3575746-3575805)
chr2 (163-222)||(25289057-25289116)
chr2 (163-222)||(28845480-28845539)
chr2 (214-276)||(3464572-3464634)
chr2 (218-276)||(43079472-43079530)
chr2 (170-222)||(28739265-28739317)
chr2 (163-222)||(10658333-10658392)
chr2 (163-222)||(13832802-13832861)
chr2 (163-222)||(33136496-33136555)
chr2 (163-222)||(43079382-43079441)
chr2 (218-268)||(14919811-14919861)
chr2 (105-151)||(17326732-17326778)
chr2 (218-271)||(36597697-36597750)
chr2 (169-209)||(2373875-2373915)
chr2 (215-276)||(35171428-35171493)
chr2 (216-276)||(35906945-35907005)
chr2 (163-222)||(18178174-18178233)
chr2 (163-222)||(26789687-26789746)
chr2 (214-269)||(45497489-45497544)
chr2 (214-269)||(45505231-45505286)
chr2 (170-216)||(379838-379884)
chr2 (214-276)||(2289261-2289323)
chr2 (215-249)||(28739206-28739240)
chr2 (110-166)||(2373859-2373915)
chr2 (163-211)||(3464505-3464553)
chr2 (163-222)||(7027806-7027865)
chr2 (214-276)||(27979874-27979936)
chr2 (214-276)||(28066404-28066466)
chr2 (222-274)||(10658423-10658475)
chr2 (215-271)||(38821303-38821359)
[»] chr8 (74 HSPs)
chr8 (40-168)||(37857700-37857828)
chr8 (50-177)||(32498723-32498850)
chr8 (40-177)||(43165918-43166055)
chr8 (40-165)||(43307760-43307885)
chr8 (50-168)||(9287743-9287861)
chr8 (40-177)||(7467144-7467281)
chr8 (40-177)||(18305212-18305349)
chr8 (40-177)||(19717116-19717253)
chr8 (40-177)||(44725032-44725169)
chr8 (40-168)||(26856928-26857056)
chr8 (50-177)||(42304862-42304989)
chr8 (40-177)||(18957969-18958106)
chr8 (72-177)||(20831215-20831320)
chr8 (50-148)||(16365111-16365209)
chr8 (50-137)||(39466797-39466884)
chr8 (215-276)||(16365263-16365324)
chr8 (40-125)||(40012462-40012547)
chr8 (215-276)||(4030491-4030552)
chr8 (215-276)||(4656054-4656115)
chr8 (215-276)||(7149012-7149073)
chr8 (215-276)||(9458485-9458546)
chr8 (215-276)||(10795422-10795483)
chr8 (215-276)||(14781295-14781356)
chr8 (215-276)||(18305124-18305185)
chr8 (215-276)||(19717028-19717089)
chr8 (215-276)||(40264322-40264383)
chr8 (215-276)||(43489898-43489959)
chr8 (215-276)||(44724944-44725005)
chr8 (215-271)||(39371217-39371273)
chr8 (215-270)||(2113766-2113821)
chr8 (103-177)||(7467292-7467366)
chr8 (214-276)||(42304790-42304852)
chr8 (214-276)||(43307701-43307763)
chr8 (215-276)||(7467393-7467454)
chr8 (40-137)||(14781413-14781510)
chr8 (219-276)||(18957881-18957938)
chr8 (219-276)||(20831127-20831184)
chr8 (215-276)||(39466681-39466742)
chr8 (215-276)||(42275922-42275983)
chr8 (215-276)||(43604422-43604483)
chr8 (215-271)||(41385922-41385978)
chr8 (40-115)||(10294660-10294735)
chr8 (215-274)||(31626286-31626345)
chr8 (163-222)||(32498793-32498852)
chr8 (163-222)||(43165916-43165975)
chr8 (40-177)||(31626130-31626259)
chr8 (215-276)||(32498877-32498938)
chr8 (215-276)||(35143064-35143125)
chr8 (215-275)||(37857864-37857922)
chr8 (219-276)||(38805971-38806028)
chr8 (214-266)||(10294564-10294616)
chr8 (163-211)||(37857780-37857828)
chr8 (163-222)||(7467224-7467283)
chr8 (163-222)||(7467309-7467368)
chr8 (163-222)||(18305210-18305269)
chr8 (163-222)||(19717114-19717173)
chr8 (163-222)||(31626202-31626261)
chr8 (218-276)||(1605847-1605905)
chr8 (163-217)||(9287737-9287791)
chr8 (170-222)||(18957967-18958019)
chr8 (163-211)||(26857008-26857056)
chr8 (163-211)||(42304871-42304919)
chr8 (219-274)||(5266790-5266845)
chr8 (163-222)||(20831213-20831272)
chr8 (215-270)||(41964650-41964705)
chr8 (163-222)||(44725030-44725089)
chr8 (214-276)||(28620661-28620723)
chr8 (219-276)||(40012342-40012399)
chr8 (174-222)||(10294624-10294672)
chr8 (215-246)||(9287676-9287707)
chr8 (216-270)||(14062471-14062525)
chr8 (219-249)||(43165856-43165886)
chr8 (215-276)||(10128241-10128302)
chr8 (215-271)||(9209888-9209944)
[»] chr5 (41 HSPs)
chr5 (40-177)||(1151535-1151672)
chr5 (40-177)||(13926754-13926891)
chr5 (40-177)||(40012953-40013090)
chr5 (40-167)||(5949940-5950067)
chr5 (40-177)||(4549501-4549638)
chr5 (51-167)||(7947279-7947395)
chr5 (40-137)||(39853184-39853281)
chr5 (40-144)||(4239739-4239843)
chr5 (50-137)||(37014699-37014785)
chr5 (215-276)||(10553714-10553775)
chr5 (215-276)||(13999262-13999323)
chr5 (215-276)||(40411395-40411456)
chr5 (215-276)||(1151447-1151508)
chr5 (215-276)||(1459343-1459404)
chr5 (215-276)||(4549413-4549474)
chr5 (215-276)||(11632733-11632794)
chr5 (215-276)||(13926918-13926979)
chr5 (215-276)||(13949848-13949909)
chr5 (215-276)||(39853338-39853399)
chr5 (163-222)||(1151533-1151592)
chr5 (221-276)||(10553486-10553541)
chr5 (163-222)||(40012951-40013010)
chr5 (40-134)||(1459464-1459558)
chr5 (215-276)||(4239628-4239689)
chr5 (219-276)||(7947181-7947238)
chr5 (215-276)||(13717081-13717142)
chr5 (215-276)||(40012865-40012926)
chr5 (219-271)||(3603512-3603564)
chr5 (167-210)||(5950024-5950067)
chr5 (40-137)||(13999380-13999477)
chr5 (219-268)||(17519499-17519548)
chr5 (215-274)||(5950104-5950163)
chr5 (163-222)||(13926834-13926893)
chr5 (163-217)||(4549504-4549558)
chr5 (215-267)||(32827897-32827949)
chr5 (221-276)||(18676978-18677033)
chr5 (214-276)||(2275316-2275378)
chr5 (215-260)||(10572271-10572316)
chr5 (219-276)||(37014846-37014903)
chr5 (170-210)||(7947279-7947319)
chr5 (216-268)||(26629567-26629619)
[»] scaffold0054 (3 HSPs)
scaffold0054 (40-167)||(36550-36677)
scaffold0054 (215-276)||(36448-36509)
scaffold0054 (163-210)||(36550-36597)
[»] scaffold0940 (3 HSPs)
scaffold0940 (40-177)||(3709-3846)
scaffold0940 (215-276)||(3621-3682)
scaffold0940 (163-222)||(3707-3766)
[»] scaffold1521 (3 HSPs)
scaffold1521 (40-177)||(1428-1565)
scaffold1521 (215-272)||(1344-1401)
scaffold1521 (169-222)||(1426-1479)
[»] scaffold0383 (3 HSPs)
scaffold0383 (40-177)||(16283-16420)
scaffold0383 (215-272)||(16199-16256)
scaffold0383 (169-222)||(16281-16334)
[»] scaffold0152 (6 HSPs)
scaffold0152 (40-177)||(20510-20647)
scaffold0152 (40-177)||(29154-29291)
scaffold0152 (215-272)||(20426-20483)
scaffold0152 (215-272)||(29318-29375)
scaffold0152 (169-222)||(20508-20561)
scaffold0152 (169-222)||(29240-29293)
[»] scaffold0839 (3 HSPs)
scaffold0839 (42-177)||(3249-3384)
scaffold0839 (163-222)||(3247-3306)
scaffold0839 (215-276)||(3161-3222)
[»] scaffold0110 (3 HSPs)
scaffold0110 (40-124)||(38931-39015)
scaffold0110 (219-274)||(38797-38857)
scaffold0110 (171-217)||(38891-38937)
[»] scaffold0237 (1 HSPs)
scaffold0237 (215-276)||(20494-20555)
[»] scaffold0153 (1 HSPs)
scaffold0153 (215-276)||(33872-33933)
[»] scaffold0016 (1 HSPs)
scaffold0016 (215-276)||(80840-80901)
[»] scaffold0472 (1 HSPs)
scaffold0472 (214-276)||(985-1047)
[»] scaffold0095 (1 HSPs)
scaffold0095 (215-276)||(21759-21820)
[»] scaffold0202 (1 HSPs)
scaffold0202 (214-276)||(15672-15734)


Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 40 - 276
Target Start/End: Original strand, 48207341 - 48207577
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  48207341 atttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttg 48207440  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48207441 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 48207540  T
Q  240 caatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||| |||||||||||||||||||||||||    
T  48207541 caatacaatcccacaaagtcttttaaaatcttaaaga 48207577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 41 - 276
Target Start/End: Original strand, 48198759 - 48198994
Alignment:
Q  41 tttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaa 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48198759 tttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttga 48198858  T
Q  141 aatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48198859 aatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtgtgataaatcccttaaagtcttttaaaatctcacagaatc 48198958  T
Q  241 aatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||| |||||||||||||||||||||||||    
T  48198959 aatacaatcccacaaagtcttttaaaatcttaaaga 48198994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 46328798 - 46328914
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  46328798 tatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttaaaatccttaa 46328897  T
Q  150 aattcagtgtgataaat 166  Q
    || ||||||||||||||    
T  46328898 aagtcagtgtgataaat 46328914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 25830623 - 25830495
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||| |||||||||||||     
T  25830623 atttgttcattatttttatcattcacgcttgtaagtttgttctttttaccctaaaattcattgaatccttttaaattttaaaatcacataaaatcctttg 25830524  T
Q  140 aaatccttaaaattcagtgtgataaatcc 168  Q
    |||||||||||| ||||||||||||||||    
T  25830523 aaatccttaaaagtcagtgtgataaatcc 25830495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 15834410 - 15834282
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||  |||||||||||||     
T  15834410 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatgacataaaatcctttg 15834311  T
Q  140 aaatccttaaaattcagtgtgataaatcc 168  Q
    |||||||||||| || |||||||||||||    
T  15834310 aaatccttaaaagtctgtgtgataaatcc 15834282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 38535530 - 38535391
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttctttttt--cgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||||  | ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  38535530 atttgttcattatttctatcattcacgcttgtaagtttgttcttttttttccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctt 38535431  T
Q  138 taaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||||| |||||| ||||||| ||||||||  |||||||    
T  38535430 taaaatcattaaaagtcagtgttataaatcctttaaaatc 38535391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 38557748 - 38557609
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttctttttt--cgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||||  | ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  38557748 atttgttcattatttctatcattcacgcttgtaagtttgttcttttttttccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctt 38557649  T
Q  138 taaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||||| |||||| ||||||| ||||||||  |||||||    
T  38557648 taaaatcattaaaagtcagtgttataaatcctttaaaatc 38557609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 8140235 - 8140098
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| || |||||||| ||||||||||||||||||| |  |||| |||||||||||||||||||| |||||||| ||||||||| |||     
T  8140235 atttgttcattatttttaacattcacgcttgtaagtttgttctttttcccttaaaattcattgaatcctttgaaattttaaaatcacataaaatcatttg 8140136  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  8140135 aaatccttaaaagtcagtgtgataaatcctttaaaatc 8140098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 28386831 - 28386694
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| || ||||||||||||||||| |||||||| ||||||||| |||     
T  28386831 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcctttgaaattttaaaatcacataaaatcttttg 28386732  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  28386731 aaatccttaaaagtctgtgtgataaatcctttaaaatc 28386694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 276
Target Start/End: Original strand, 29219934 - 29220159
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttt-tcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttt 138  Q
    ||||||| | ||||| ||||||||| | ||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  29219934 atttgttcattatttttatcattcatgtttgtaagtttgttctttttctcg-taaaattcattgaatcctttgaaattttaaaatcacataaaatccttt 29220032  T
Q  139 aaaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaa 238  Q
     |||||||||||| ||||||||||||||||  ||||||  |||||     |  ||||||  |   |||||       |||||||||||||||||||||||    
T  29220033 gaaatccttaaaagtcagtgtgataaatcctttaaaat--tttgagtgtat--aaagtcttttacataaa-------aagtcttttaaaatctcacagaa 29220121  T
Q  239 tcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||  ||| |||||||||||||||||||||    
T  29220122 tcaatacaatctcacacagtcttttaaaatcttaaaga 29220159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 45273400 - 45273517
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||| || | ||||||||||||||| |||||||| ||||||||||||| |||||||| |    
T  45273400 tatttttatcattcacgcttgtaagtttgttcttttttccctaaaatttactgaatcctttgaaattttaaaatcccataaaatcctttgaaatccttga 45273499  T
Q  150 aattcagtgtgataaatc 167  Q
    || |||||||||||||||    
T  45273500 aagtcagtgtgataaatc 45273517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 49231806 - 49231943
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||| ||||||||| ||| | | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  49231806 atttgttcattatttttatcattcacgcttgaaagtttgttgtttctcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 49231905  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  49231906 aaatccttaaaagtcagtgtgataaatcctttaaaatc 49231943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 51702416 - 51702553
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||| |||||||| ||||     
T  51702416 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaattctttg 51702515  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  51702516 aaatccttaaaagtctgtgtgataaatcctttaaaatc 51702553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 20111958 - 20111827
Alignment:
Q  40 atttgtttactatttctatcattca----cggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcc 135  Q
    ||||||||||||||| |||||||||    || ||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||| ||||||| ||    
T  20111958 atttgtttactatttttatcattcattcacgcttgtaagtttgttctttttcctctaaaattcatagaatcctttgaaatattaaaatcccataaaaccc 20111859  T
Q  136 tttaaaatccttaaaattcagtgtgataaatc 167  Q
    ||| |||||||||||| ||| |||||||||||    
T  20111858 tttgaaatccttaaaagtcaatgtgataaatc 20111827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 25612914 - 25613051
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  25612914 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 25613013  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  25613014 aaatccttaaaagtctgtgtgataaatcctttaaaatc 25613051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 29395810 - 29395673
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||| ||| ||||||||||||||||||| | ||||| ||||| ||||| |||||||| |||||||| |||||||||||||     
T  29395810 atttgttcattatttttatcatttacgcttgtaagtttgttctttttcccctaaaattcatcgaatcttttgaaattttaaaatcacataaaatcctttg 29395711  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  29395710 aaatccttaaaagtctgtgtgataaatcctttaaaatc 29395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 6313398 - 6313535
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  6313398 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 6313497  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  6313498 aaatccttaaaagtctgtgtgataaatcctttaaaatc 6313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 9321892 - 9321755
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  9321892 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 9321793  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  9321792 aaatccttaaaagtctgtgtgataaatcctttaaaatc 9321755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 18799274 - 18799370
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||||||||||| ||||| ||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  18799274 atttgttcattatttttatcattcacgcttgta-gtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 18799370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 6313562 - 6313623
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  6313562 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 6313623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 9321728 - 9321667
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  9321728 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 9321667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 20111790 - 20111729
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  20111790 aaagtcttttaaaatctcacagaatcagtacaatctcacaaagtcttttaaaatcttaaaga 20111729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 25613078 - 25613139
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  25613078 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 25613139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 29395646 - 29395585
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  29395646 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 29395585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 48176795 - 48176718
Alignment:
Q  60 attcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||| ||| |||| ||||||||||||    
T  48176795 attcacgcttgtaagtttgttcttttttcccaaaaattcattgaatcctttgaaattttagaatcacataaaatcctt 48176718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 51702580 - 51702641
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  51702580 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 51702641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 52706366 - 52706427
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  52706366 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 52706427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 14389400 - 14389456
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  14389400 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 14389456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 39758861 - 39758916
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  39758861 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 39758916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 39764215 - 39764270
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  39764215 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 39764270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 45319453 - 45319514
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| | || ||||||||||||||||||||||||||||||||||| ||||    
T  45319453 aaagtcttttaaaatcccgcaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 45319514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 49231970 - 49232031
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  49231970 aaagtattttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 49232031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 5494501 - 5494427
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaat 115  Q
    ||||||| | ||||| ||||||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  5494501 atttgttcattatttttatcattcacgcttgtaagtttgtttttttttc-ctaaaattcattgaatcctttgaaat 5494427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 38535365 - 38535306
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||||    
T  38535365 aaagtcttttaaaatctcatagaatcaatacaatctaacacagacttttaaaatcttaaa 38535306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 38557583 - 38557524
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||||    
T  38557583 aaagtcttttaaaatctcatagaatcaatacaatctaacacagacttttaaaatcttaaa 38557524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 49231886 - 49231945
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  49231886 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 49231945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 25830543 - 25830489
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 217  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  25830543 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaa 25830489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 26881920 - 26881863
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||    
T  26881920 tcttttaaaatcccacaaaatcaatacaatccaacaaagtcttctaaaatctttaaga 26881863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 28386667 - 28386606
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||| ||||  ||| |||||||||||||||||||||    
T  28386667 aaagtcttttaaaatctcacaaaatcaatagaatctcacacagtcttttaaaatcttaaaga 28386606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 45535735 - 45535796
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||| ||||||||| ||||    
T  45535735 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaaatcttctaaaatcttcaaga 45535796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 5494366 - 5494307
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||| ||||||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  5494366 aaagtgttttaaaatctcacataatcaatacaatctcacagagtcttttaaaatcttaaa 5494307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 8140155 - 8140096
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||    
T  8140155 aaatcacataaaatcatttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 8140096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 29395730 - 29395671
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  29395730 aaatcacataaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 29395671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 45273470 - 45273517
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  45273470 aaatcccataaaatcctttgaaatccttgaaagtcagtgtgataaatc 45273517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 46328952 - 46329007
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||    
T  46328952 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttgaaatct 46329007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 51826069 - 51826008
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||  |||| |||||||||||||  |||||||||||||||||||| ||||    
T  51826069 aaagtcttttaaaatgccacaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 51826008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 6313478 - 6313537
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  6313478 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 6313537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 9321812 - 9321753
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  9321812 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 9321753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 20111874 - 20111827
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||||    
T  20111874 aaatcccataaaaccctttgaaatccttaaaagtcaatgtgataaatc 20111827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 25612994 - 25613053
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  25612994 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 25613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 28386751 - 28386692
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||||||| ||||| ||||    
T  28386751 aaatcacataaaatcttttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 28386692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 46328868 - 46328927
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||| | ||||| ||||    
T  46328868 aaatcacataaaatcctttaaaatccttaaaagtcagtgtgataaattctttaaaatctt 46328927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 51702496 - 51702555
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||| |||||||||||||||||||| || |||||||||| ||||| ||||    
T  51702496 aaatcacataaaattctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 51702555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 15834324 - 15834282
Alignment:
Q  169 cataaaatcctttgaaatccttaaaagtcagtatgataaatcc 211  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  15834324 cataaaatcctttgaaatccttaaaagtctgtgtgataaatcc 15834282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 25830459 - 25830425
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatc 249  Q
    |||||||||||||||||||||||||||||||||||    
T  25830459 aaagtcttttaaaatctcacagaatcaatacaatc 25830425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 38535448 - 38535389
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||| ||||| |||||||||||| | |||||||| ||||| ||||    
T  38535448 aaatcacataaaatcctttaaaatcattaaaagtcagtgttataaatcctttaaaatctt 38535389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 38557666 - 38557607
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||| ||||| |||||||||||| | |||||||| ||||| ||||    
T  38557666 aaatcacataaaatcctttaaaatcattaaaagtcagtgttataaatcctttaaaatctt 38557607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 45273547 - 45273606
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||||||||||||||||| | |||||||| ||||  | | |||||||||||||||||||    
T  45273547 aaagtcttttaaaatctcataaaatcaatataatctcatatagtcttttaaaatcttaaa 45273606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 5494439 - 5494403
Alignment:
Q  174 aatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  5494439 aatcctttgaaatccttgaaagtcagtgtgataaatc 5494403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 221; Significance: 1e-121; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 40 - 276
Target Start/End: Original strand, 7104335 - 7104571
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7104335 atttgtttactatttctatcatttacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttg 7104434  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7104435 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 7104534  T
Q  240 caatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7104535 caatacaatcccacaaagtcttttaaaatcttaaaga 7104571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 40 - 276
Target Start/End: Complemental strand, 8790295 - 8790059
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8790295 atttgtttactatttctatcatttacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttg 8790196  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8790195 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 8790096  T
Q  240 caatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8790095 caatacaatcccacaaagtcttttaaaatcttaaaga 8790059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 7497912 - 7498049
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  7497912 atttgttcattatttctatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 7498011  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||| |||||| ||||||||||||||||  |||||||    
T  7498012 aaatctttaaaagtcagtgtgataaatcctttaaaatc 7498049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 30384444 - 30384307
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  30384444 atttgttcattatttttatcatccacgcttgtaagtttgttctttttcctctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 30384345  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  30384344 aaatccttaaaagtcagtgtgataaatcctttaaaatc 30384307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 14261823 - 14261686
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||  ||||||||||||||||||  | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  14261823 atttgttcattatttttatcatccacacttgtaagtttgttcttttccccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 14261724  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||| |||||| ||||||||||||||||  |||||||    
T  14261723 aaatcattaaaagtcagtgtgataaatcctttaaaatc 14261686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 31896459 - 31896596
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  31896459 atttgttcattatttttatcattcacgtttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 31896558  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  31896559 aaatccttaaaagtctgtgtgataaatcctttaaaatc 31896596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 31068245 - 31068373
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  31068245 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 31068344  T
Q  140 aaatccttaaaattcagtgtgataaatcc 168  Q
    |||||||||||| || |||||||||||||    
T  31068345 aaatccttaaaagtctgtgtgataaatcc 31068373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 34774207 - 34774344
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| |||||||||  |||| || |||||||  |||||||| |||||||| ||| |||||||||     
T  34774207 atttgttcattatttttatcattcacgcttgtaagtttgctcttttttccttaaaatttattgaatattttgaaattttaaaatcacatgaaatcctttg 34774306  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  34774307 aaatccttaaaagtctgtgtgataaatcctttaaaatc 34774344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 3109458 - 3109397
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  3109458 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 3109397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 6475851 - 6475790
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  6475851 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 6475790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 14261659 - 14261598
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  14261659 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 14261598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 29864860 - 29864799
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  29864860 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 29864799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 34774371 - 34774432
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  34774371 aaagtcttttaaaatctcacagaatcaatacaatcttacacagtcttttaaaatcttaaaga 34774432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 30384280 - 30384220
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaag 275  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  30384280 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaag 30384220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 4199696 - 4199637
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  4199696 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 4199637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 7498076 - 7498137
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  7498076 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 7498137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 27585293 - 27585232
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||    
T  27585293 aaagtcttttaaaatctcacagaatcaataaaatctcacacagtcttttaaaatcttaaaga 27585232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 31068406 - 31068467
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||| |||||||||||||||||||  ||| |||||||||||||||||||||    
T  31068406 aaagtcttttaaaatatcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 31068467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 31896623 - 31896684
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||    
T  31896623 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtattttaaaatcttaaaga 31896684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 30384364 - 30384305
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  30384364 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 30384305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 7497992 - 7498051
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||||||| ||||| ||||    
T  7497992 aaatcacataaaatcctttgaaatctttaaaagtcagtgtgataaatcctttaaaatctt 7498051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 14261743 - 14261684
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||||||| ||||| ||||    
T  14261743 aaatcacataaaatcctttgaaatcattaaaagtcagtgtgataaatcctttaaaatctt 14261684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 4199840 - 4199756
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatc 124  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| |  |||| || |||||||| |||||||| ||||||||    
T  4199840 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccttaaaatttattgaatcttttgaaattttaaaatc 4199756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 31896539 - 31896598
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  31896539 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 31896598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 34774287 - 34774346
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  34774287 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 34774346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 31068325 - 31068373
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcc 211  Q
    ||||| ||| ||||||||||||||||||||||||| || ||||||||||    
T  31068325 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcc 31068373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 10262910 - 10262853
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctta 272  Q
    ||||| ||||||||||  ||| |||||||| ||||  |||||||||||||||||||||    
T  10262910 aaagtattttaaaatccaacataatcaatataatctcacaaagtcttttaaaatctta 10262853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 40 - 276
Target Start/End: Original strand, 38234414 - 38234650
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38234414 atttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttg 38234513  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  38234514 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtttgataaatcccttaaagtcttttaaaatcttacagaat 38234613  T
Q  240 caatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||| |||||||||||||||||||||||||    
T  38234614 caatacaatcccacaaagtcttttaaaatcttaaaga 38234650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 49500912 - 49500775
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| |||||||||| |||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  49500912 atttgttcattatttttatcattcacgcttgtaagtttattctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 49500813  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  49500812 aaatccttaaaagtcagtgtgataaatcctttaaaatc 49500775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 51321678 - 51321815
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||| |||     
T  51321678 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttttg 51321777  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  51321778 aaatccttaaaagtcagtgtgataaatcctttaaaatc 51321815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 41725938 - 41726065
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||| ||||||||||||| ||||||||||    
T  41725938 tatttatatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttaaaattttaaaatcacataaaatcctttgaaatccttaa 41726037  T
Q  150 aattcagtgtgataaatcccataaaatc 177  Q
    || ||||||||||||||||  |||||||    
T  41726038 aagtcagtgtgataaatcctttaaaatc 41726065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 5801527 - 5801664
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||| ||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  5801527 atttgttcattatttttatcattcacgcttgtaagtttgttatttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 5801626  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||| ||||||||||||  |||||||    
T  5801627 aaatccttaaaagtcaatgtgataaatcctttaaaatc 5801664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 54852856 - 54852719
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| |  |||| |||||||||||||||||||| |||||||| |||||||||||||     
T  54852856 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccttaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 54852757  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  54852756 aaatccttaaaagtcagtgtgataaatcctttaaaatc 54852719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 276
Target Start/End: Original strand, 23988019 - 23988244
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||| ||||     
T  23988019 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaattctttg 23988118  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 239  Q
    ||||| ||||||  |||||||||||||||  ||||||| |  ||     |  ||||||  ||  |||||       ||||||||||||||||||||||||    
T  23988119 aaatctttaaaagccagtgtgataaatcctttaaaatcttaagag----tataaagtctttaatataaa-------aagtcttttaaaatctcacagaat 23988207  T
Q  240 caatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||  ||| | |||||||||||||||||||    
T  23988208 caatacaatctcacatattcttttaaaatcttaaaga 23988244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 37916613 - 37916750
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||  ||||||||||||||||||| |  |||| |||||||||||||||||||| |||||||| |||||||||||||     
T  37916613 atttgttcattatttttatcattcacacttgtaagtttgttctttttcccttaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 37916712  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||| ||||||||||||  |||||||    
T  37916713 aaatccttaaaagtcattgtgataaatcctttaaaatc 37916750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 54341969 - 54342106
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||| ||| ||||||||||||||||||| | ||||| ||||| ||||| |||||||| |||||||| |||||||||||||     
T  54341969 atttgttcattatttttatcatttacgcttgtaagtttgttctttttcccctaaaattcatcgaatcttttgaaattttaaaatcacataaaatcctttg 54342068  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  54342069 aaatccttaaaagtctgtgtgataaatcctttaaaatc 54342106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 32322892 - 32323028
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||  |||| ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||| |||||||||||||     
T  32322892 atttgttcattatttttatcagacacgcttgtaagtttgttctttttcc-ctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctttg 32322990  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||| ||||||||||||  |||||||    
T  32322991 aaatccttaaaagtcaatgtgataaatcctttaaaatc 32323028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 37827808 - 37827671
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  37827808 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 37827709  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  37827708 aaatccttaaaagtctgtgtgataaatcctttaaaatc 37827671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 50019014 - 50019150
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||| | ||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||  ||||||||||||     
T  50019014 atttgttcattatttttatcattcatgcttgtaagtttgtt-ttttttccctaaaattcattgaatcctttgaaattttaaaatcatataaaatcctttg 50019112  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || || ||||||||||  |||||||    
T  50019113 aaatccttaaaagtctgtatgataaatcctttaaaatc 50019150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 5442216 - 5442352
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  5442216 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcc-ctaaaatttattgaatcttttgaaattttaaaatcccatgaaatcctttg 5442314  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  5442315 aaatccttaaaagtctgtgtgataaatcctttaaaatc 5442352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 27768887 - 27769023
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||  ||||||||||| ||||||  | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  27768887 atttgttcattatttttatcattcacacttgtaagtttgctcttttccc-ctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 27768985  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  27768986 aaatccttaaaagtctgtgtgataaatcctttaaaatc 27769023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 32683407 - 32683296
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| |||||||||| ||||||||   ||||| |||||  ||||||||||||| |||||||| ||||||||| |||     
T  32683407 atttgttcattatttttatcattcacgcttgtaagtttattctttttgttctaaaattcatccaatcctttgaaattttaaaatcacataaaatcatttg 32683308  T
Q  140 aaatccttaaaa 151  Q
    ||||||||||||    
T  32683307 aaatccttaaaa 32683296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 27769050 - 27769111
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  27769050 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 27769111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 54342133 - 54342194
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  54342133 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 54342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 30966437 - 30966350
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||| ||||||||||| || |||||||||||||||| | ||||| || |||||||| |||||||| |||||||| ||||||||||||    
T  30966437 tatttttatcattcacgcttctaagtttgttctttttcccctaaaatttattgaatcttttgaaattttaaaatcacataaaatcctt 30966350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 5801691 - 5801752
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||    
T  5801691 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatctcaaaga 5801752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 7808976 - 7809037
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||||    
T  7808976 aaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 7809037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 7820927 - 7820988
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||||    
T  7820927 aaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 7820988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 8583105 - 8583048
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  8583105 tcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 8583048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 29649238 - 29649177
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||    
T  29649238 aaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaaga 29649177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 29649392 - 29649295
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||||||||||| || ||| ||||||||||||   ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  29649392 atttgttcattatttttatcattcacgcttctaaatttgttctttttcacctaaaattcattgaatcatttgaaattttaaaatcacataaaatcctt 29649295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 32323055 - 32323116
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  32323055 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 32323116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 32683239 - 32683182
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  32683239 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 32683182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 42315860 - 42315921
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  42315860 aaagtgttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 42315921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 48262061 - 48262122
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||    
T  48262061 aaagtcttttaaaatctcacagaatcaatacaatttcacacagtcttttaaaatcttaaaga 48262122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 48532029 - 48531968
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  48532029 aaagtcttttaaaatctcacagaatcaatacaatcttacagaatcttttaaaatcttaaaga 48531968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 49834219 - 49834122
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||| ||||||| ||||||||||||| ||||| | ||||| |||||||||||||||||||  |||||||| | ||||||||||    
T  49834219 atttgttcattatttttattattcacgcttgtaagtttgttatttttcccctaaaattcattgaatcctttgaaaatttaaaatcacttaaaatcctt 49834122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 50019177 - 50019238
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  50019177 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaattttaaaga 50019238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 41726008 - 41726067
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  41726008 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 41726067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 49500832 - 49500773
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  49500832 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 49500773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 49834082 - 49834020
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||| |||||||||||||  ||| | |||||||||||||||||||    
T  49834082 taaagtcttttaaaatctcacaaaatcaatacaatctcacataatcttttaaaatcttaaaga 49834020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 54852776 - 54852722
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 217  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  54852776 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaa 54852722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 3434931 - 3434874
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||||||||| ||||    
T  3434931 tcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 3434874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 37827644 - 37827583
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||| |||||||||||| |||||||||||||||  ||| |||||||||||||||||||||    
T  37827644 aaagtcatttaaaatctcagagaatcaatacaatctcacacagtcttttaaaatcttaaaga 37827583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 42217555 - 42217495
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||||    
T  42217555 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtc-tttaaaatcttcaaga 42217495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 49500748 - 49500687
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||| |||||||||||||||||||   || |||||||||||||||||||||    
T  49500748 aaagtcttttaaaatttcacagaatcaatacaatctcgcacagtcttttaaaatcttaaaga 49500687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 51321842 - 51321903
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||| |||||||||||||||||||  ||| |||| ||||||||||||||||    
T  51321842 aaagtcttttaaaatttcacagaatcaatacaatctcacatagtcgtttaaaatcttaaaga 51321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 50019100 - 50019152
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  50019100 ataaaatcctttgaaatccttaaaagtctgtatgataaatcctttaaaatctt 50019152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 5442295 - 5442354
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  5442295 aaatcccatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 5442354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 5801607 - 5801666
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||||| ||||| ||||    
T  5801607 aaatcacataaaatcctttgaaatccttaaaagtcaatgtgataaatcctttaaaatctt 5801666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 32322971 - 32323030
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||||| ||||| ||||    
T  32322971 aaatcacataaaatcctttgaaatccttaaaagtcaatgtgataaatcctttaaaatctt 32323030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 37916693 - 37916752
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||||| ||||| ||||    
T  37916693 aaatcacataaaatcctttgaaatccttaaaagtcattgtgataaatcctttaaaatctt 37916752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 51321758 - 51321817
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||    
T  51321758 aaatcacataaaatcttttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 51321817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 54342049 - 54342108
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  54342049 aaatcacataaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 54342108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 5442379 - 5442438
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||   || |||||||||||||||||||||    
T  5442379 aaagtcttttaaaatctcacaaaatcaatacaatc--tcacagtcttttaaaatcttaaaga 5442438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 41726092 - 41726153
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||  | | | |||||||||||||||||||    
T  41726092 aaagtcttttaaaatctcacataatcaatacaatctcaaacaatcttttaaaatcttaaaga 41726153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 53272823 - 53272880
Alignment:
Q  213 ttaaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    ||||||||||||||||||||| | |||||||| ||||  |||||||||||||||||||    
T  53272823 ttaaagtcttttaaaatctcataaaatcaatagaatcacacaaagtcttttaaaatct 53272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 56399018 - 56399074
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    ||||| ||| ||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  56399018 aaagtttttaaaaatctcacaaaatcaataaaattcaacaaagtcttttaaaatctt 56399074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 27768966 - 27769025
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  27768966 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 27769025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 28484722 - 28484797
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaat 115  Q
    ||||||| | ||||| ||||||||||   ||||| |||||||||||| | ||||| ||||||||||||||||||||    
T  28484722 atttgttcattatttttatcattcacacatgtaattttgttctttttcctctaaaattcattgaatcctttgaaat 28484797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 37827728 - 37827674
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 217  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| |||||    
T  37827728 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaa 37827674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 37916778 - 37916844
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaa-----caaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||| |||     || |||||||||||||||||||||    
T  37916778 aaagtcttttaaaatctcacaaaatcaatacaatacaatctcacacagtcttttaaaatcttaaaga 37916844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 52110237 - 52110299
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||| ||||||||||||||| | |||||||||||||  ||||| |||||||||||||| ||||    
T  52110237 taaaatcttttaaaatctcaaaaaatcaatacaatcgcacaaaatcttttaaaatctttaaga 52110299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 30966293 - 30966232
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||| |||||||||| ||||  | | | |||||||||||||||||||    
T  30966293 aaagtcttttaaaatctcatagaatcaatataatctcatacaatcttttaaaatcttaaaga 30966232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 25936902 - 25936959
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||| ||||||||||| | | ||||||||||||   ||||||||||||||||||||    
T  25936902 taaagtattttaaaatcttaaaaaatcaatacaattacacaaagtcttttaaaatctt 25936959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 49834132 - 49834092
Alignment:
Q  137 ttaaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||||||||||||| ||||||||||||||||  |||||||    
T  49834132 ttaaaatccttaaaagtcagtgtgataaatcctttaaaatc 49834092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 40 - 274
Target Start/End: Complemental strand, 46035733 - 46035499
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||     
T  46035733 atttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaattttttg 46035634  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46035633 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtgtgataaatcccttaaagtcttttaaaatctcacagaat 46035534  T
Q  240 caatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||||||| | |||||||||||||||||||||||    
T  46035533 caatacaattccacaaagtcttttaaaatcttaaa 46035499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 40 - 269
Target Start/End: Original strand, 26182915 - 26183134
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  26182915 atttgtttactatttctatcattcacggttgaaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatcccataaaatcctttg 26183014  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 239  Q
    |||||||||||||||||||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  26183015 aaatccttaaaattcagtgtgataaatcccata----------aaatccttaaaagtcagtgtgataaatcccttaaagtcttttaaaatctcacataat 26183104  T
Q  240 caatacaatccaacaaagtcttttaaaatc 269  Q
    ||||||||||| ||||||||||||||||||    
T  26183105 caatacaatcccacaaagtcttttaaaatc 26183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 3023747 - 3023884
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  3023747 atttgttcattatttttatcatccacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 3023846  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  3023847 aaatccttaaaagtcagtgtgataaatcctttaaaatc 3023884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 18839116 - 18839253
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||| |||||||||||||     
T  18839116 atttgttcattatttttatcattcacgcttgtaagtttgttctttttccactaaaattcattgaatcttttgaaattttaaaatcacataaaatcctttg 18839215  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  18839216 aaatccttaaaagtcagtgtgataaatcctttaaaatc 18839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 29893778 - 29893904
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||| |||     
T  29893778 atttgttcattatttctatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttttg 29893877  T
Q  140 aaatccttaaaattcagtgtgataaat 166  Q
    ||||| |||||| ||||||||||||||    
T  29893878 aaatctttaaaagtcagtgtgataaat 29893904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 12741195 - 12741332
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||| | |||||||  |||||||||||||     
T  12741195 atttgttcattatttttatcattcacgcttgtaagtttgttcttttttccctaaaatttattgaatcctttgaatttttaaaattccataaaatcctttg 12741294  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  12741295 aaatccttaaaagtcagtgtgataaatcctttaaaatc 12741332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 44256148 - 44256020
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| |||||| |||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  44256148 atttgttcattatttttatcattcacgtttgtaaatttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 44256049  T
Q  140 aaatccttaaaattcagtgtgataaatcc 168  Q
    |||| ||||||| ||||||||||||||||    
T  44256048 aaattcttaaaagtcagtgtgataaatcc 44256020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 33383463 - 33383590
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||  | ||||| |||||||||||||||||||| |||||||||||||||| |||||     
T  33383463 atttgttcattatttttatcattcacgcttgtaagtttgttcttttccccctaaaattcattgaatcctttgaaattttaaaatctcataaaagcctttg 33383562  T
Q  140 aaatccttaaaattcagtgtgataaatc 167  Q
    |||||||| ||| |||||||||||||||    
T  33383563 aaatccttgaaagtcagtgtgataaatc 33383590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 29586334 - 29586460
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| |||||||||||||||||||||  |||| |||||||||||||||||||  ||||||||  |||||||| ||||    
T  29586334 atttgttcattatttttatcattcacgcttgtaagtttgttcttttttccttaaaattcattgaatcctttgaaaatttaaaatcatataaaatctttta 29586433  T
Q  140 aaatccttaaaattcagtgtgataaat 166  Q
    |||||||||||| ||||||||||||||    
T  29586434 aaatccttaaaagtcagtgtgataaat 29586460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 30823451 - 30823588
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||||||| ||||| | ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||| |||     
T  30823451 atttgttcattatttctattattcatgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttttg 30823550  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||| ||||||||||||  |||||||    
T  30823551 aaatccttaaaagtcaatgtgataaatcctttaaaatc 30823588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 47067522 - 47067659
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| |||||| |||||||||||| | ||||| |||||||||||||||||||| |||||||   ||||||||||||     
T  47067522 atttgttaattatttttatcattcacgtttgtaattttgttctttttcccctaaaattcattgaatcctttgaaattttaaaattatataaaatcctttg 47067621  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  47067622 aaatccttaaaagtcagtgtgataaatcctttaaaatc 47067659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 40460095 - 40459968
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||||||| |||||||||||||| |||| | |||||  |||||||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  40460095 tatttttatcattcacgcttgtaagtttgttccttttcccctaaaaatcattgaatcttttgaaattttaaaatcacataaaatcctttgaaatccttaa 40459996  T
Q  150 aattcagtgtgataaatcccataaaatc 177  Q
    || ||||||||||||||||  |||||||    
T  40459995 aagtcagtgtgataaatcctttaaaatc 40459968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 32884574 - 32884712
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgc-taaagttcattgaatcctttgaaatattaaaatctcataaaatccttt 138  Q
    ||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| | |||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  32884574 atttgtttattatttttattattcatgcttgaaagtttgttcttttttcccctaaaattcattgaatcctttaaaatattaaaatcatataaaatccttt 32884673  T
Q  139 aaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
     |||||||||||| ||||||||||||||||  |||||||    
T  32884674 gaaatccttaaaagtcagtgtgataaatcctttaaaatc 32884712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 7993978 - 7994115
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||||| || ||||||||||||||||||| |  |||| ||||||||||| |||||||| |||||||| |||||||||||||     
T  7993978 atttgttcattatttttatcattcgcgcttgtaagtttgttctttttcccataaaattcattgaatcatttgaaattttaaaatcacataaaatcctttg 7994077  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||| ||||||| ||||||||||||||||  |||||||    
T  7994078 aaattcttaaaagtcagtgtgataaatcctttaaaatc 7994115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 28343132 - 28343269
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  28343132 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 28343231  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  28343232 aaatccttaaaagtctgtgtgataaatcctttaaaatc 28343269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 39028908 - 39029012
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||| | ||||| || ||||||||||||||||| |||||||| ||||||||||||||    
T  39028908 atttgtttattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattaattgaatcctttgaaattttaaaatcacataaaatccttta 39029007  T
Q  140 aaatc 144  Q
    |||||    
T  39029008 aaatc 39029012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 12893250 - 12893159
Alignment:
Q  183 aaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||    
T  12893250 aaattcttaaaagtcagtgtgataaatcccttaaagtcttttaaaatctcatagaatcaatacaatctcacaaagtcttttaaaattttaaa 12893159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 37971761 - 37971635
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||||| | ||| || ||||||||||||| ||| |||||||| ||||||||| |||     
T  37971761 atttgttcattatttttatcattcacgcttgtaagtttgttcttttttcccaaaaatttattgaatcctttg-aattttaaaatcccataaaatcatttg 37971663  T
Q  140 aaatccttaaaattcagtgtgataaatc 167  Q
    |||||||||||| |||||||||||||||    
T  37971662 aaatccttaaaagtcagtgtgataaatc 37971635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 510468 - 510605
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  510468 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 510567  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  510568 aaatccttaaaagtctgtgtgataaatcctttaaaatc 510605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 23102113 - 23102250
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  23102113 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 23102212  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  23102213 aaatccttaaaagtctgtgtgataaatcctttaaaatc 23102250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 33891619 - 33891482
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| | ||||||||| |||||||||||||||||||   ||||| |||||||||||  ||||||| |||||||| |||||||||||||     
T  33891619 atttgttcattatttttttcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatctattgaaattttaaaatcacataaaatcctttg 33891520  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| | ||||||||||||||  |||||||    
T  33891519 aaatccttaaaagttagtgtgataaatcctttaaaatc 33891482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 40 - 276
Target Start/End: Complemental strand, 29614178 - 29613952
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| |  |||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  29614178 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccttaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 29614079  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaat 239  Q
    |||||||||||| || |||||||||||||  |||||||  |||  |   |  ||||||  |   |||||      |||||||||||||||||||||||||    
T  29614078 aaatccttaaaagtctgtgtgataaatcctttaaaatc--ttg--agtgtataaagtcttttacataaa------aaagtcttttaaaatctcacagaat 29613989  T
Q  240 caatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||  ||| |||||||||||||||||||||    
T  29613988 caatacaatctcacacagtcttttaaaatcttaaaga 29613952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 8676165 - 8676282
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| |||| |||| | ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||| |||| ||| |    
T  8676165 tatttttatcgttcatgcttgtaagtttgttcttttttccctaaagttcattgaatcctttaaaattttaaaatcccataaaatcgtttgaaattcttga 8676264  T
Q  150 aattcagtgtgataaatc 167  Q
    || ||| |||||||||||    
T  8676265 aagtcaatgtgataaatc 8676282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 44121322 - 44121225
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||| | ||||| || ||||||||||||||||| ||||||||  |||||||||||    
T  44121322 atttgttcattatttctatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcctttgaaattttaaaatcagataaaatcctt 44121225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 9881622 - 9881535
Alignment:
Q  90 ctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||||| | |||||||||| ||||||||||||||||  |||||||    
T  9881622 ctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttgatatccttaaaagtcagtgtgataaatcctttaaaatc 9881535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 35089205 - 35089144
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  35089205 aaagtcttttaaaatctcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 35089144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 12894468 - 12894404
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaa 104  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||    
T  12894468 atttgtttactatttctatcattcatggttgtaagtttgttctttttccactaaagttcattgaa 12894404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 30823531 - 30823634
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttt 262  Q
    ||||| ||||||||| |||||||||||||||||||| | ||||||||||          ||||||||||||||||||||||||||||  ||| |||||||    
T  30823531 aaatcacataaaatcttttgaaatccttaaaagtcaatgtgataaatcc----------tttaaaatctcacagaatcaatacaatctcacacagtcttt 30823620  T
Q  263 taaaatcttaaaga 276  Q
    ||||||||||||||    
T  30823621 taaaatcttaaaga 30823634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 510632 - 510693
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  510632 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 510693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 12252494 - 12252433
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  12252494 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 12252433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 23102277 - 23102338
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  23102277 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 23102338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 28343296 - 28343357
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  28343296 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 28343357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 33475515 - 33475576
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  33475515 aaagtcttttaaaatttcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 33475576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 43056796 - 43056735
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  43056796 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 43056735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 47912632 - 47912571
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  47912632 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 47912571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 3023911 - 3023970
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  3023911 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaa 3023970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 37971615 - 37971553
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||||||    
T  37971615 taaagtcttttaaaatctcacagaatcaatacaatctcacacggtcttttaaaatcttaaaga 37971553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 152839 - 152900
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||||    
T  152839 aaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 152900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 7994142 - 7994203
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||    
T  7994142 aaagtcttttaaaatcttacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 7994203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 9881508 - 9881447
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||    
T  9881508 aaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaaga 9881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 12741359 - 12741420
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||    
T  12741359 aaagtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaaga 12741420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 18839280 - 18839341
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  18839280 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 18839341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 27417756 - 27417695
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  27417756 aaagtcttttaaaatcccacaaaatcaatacaatctaacaaagtcttttaaaatcttcaaga 27417695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 30111771 - 30111832
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  30111771 aaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 30111832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 32884739 - 32884800
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||    
T  32884739 aaagtcttttaaaatctcacagaatcaatacaatttcacacagtcttttaaaatcttaaaga 32884800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 3023827 - 3023886
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  3023827 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 3023886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 12741275 - 12741334
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  12741275 aaattccataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 12741334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 18839196 - 18839255
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  18839196 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 18839255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 40460025 - 40459966
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  40460025 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 40459966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 28034411 - 28034333
Alignment:
Q  99 attgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||||||||||||||| ||||||||  ||||||| |||| |||||||||||| || |||||||||||||  |||||||    
T  28034411 attgaatcctttgaaattttaaaatcatataaaattctttgaaatccttaaaagtctgtgtgataaatcctttaaaatc 28034333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 33383627 - 33383681
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatc 269  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  33383627 aaagtcttttaaaatctcacagaatcaatacaatcttacacagtcttttaaaatc 33383681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 33891455 - 33891401
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatc 269  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  33891455 aaagtcttttaaaatctcacagaatcaatacaatctcacatagtcttttaaaatc 33891401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 21068188 - 21068285
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||||||||||  ||| |||||||||||||||   ||||| |||||| ||||||||||||  |||||||| ||||||||||||    
T  21068188 atttgttcattatttttatcattcacacttgaaagtttgttctttttctcctaaaattcatttaatcctttgaaaatttaaaatcacataaaatcctt 21068285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 29893942 - 29894003
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||  ||| | |||||||||||||||||||    
T  29893942 aaagtcttttaaaatctcacaaaatcaatacaatctcacacaatcttttaaaatcttaaaga 29894003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 39785082 - 39785143
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||| |||||||||||||||||||   || |||||||||||||||||||||    
T  39785082 aaagtcttttaaaatttcacagaatcaatacaatctcgcacagtcttttaaaatcttaaaga 39785143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 32884662 - 32884714
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  32884662 ataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 32884714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 47067609 - 47067661
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  47067609 ataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 47067661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 7994058 - 7994117
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||    
T  7994058 aaatcacataaaatcctttgaaattcttaaaagtcagtgtgataaatcctttaaaatctt 7994117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 9881592 - 9881533
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||| ||||    
T  9881592 aaatcacataaaatcctttgatatccttaaaagtcagtgtgataaatcctttaaaatctt 9881533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 276
Target Start/End: Complemental strand, 28034383 - 28034287
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatc 269  Q
    ||||||| |||||||||||||||||||| || ||||||||||          |||||||||||||| |||||||||||||  ||| |||||||||||||     
T  28034383 ataaaattctttgaaatccttaaaagtctgtgtgataaatcc----------tttaaaatctcacaaaatcaatacaatctcacacagtcttttaaaatt 28034294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 33891539 - 33891480
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||    
T  33891539 aaatcacataaaatcctttgaaatccttaaaagttagtgtgataaatcctttaaaatctt 33891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 37328812 - 37328871
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||||||||||||||||||||||||||||||||||  ||| |||| ||| ||||||||||    
T  37328812 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtccttttaaatcttaaa 37328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 37971682 - 37971635
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  37971682 aaatcccataaaatcatttgaaatccttaaaagtcagtgtgataaatc 37971635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 44256001 - 44255946
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatc 269  Q
    |||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||    
T  44256001 taaagtcttttaaaatctcagagaatcaatacaatctcacacagtcttttaaaatc 44255946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 44256068 - 44256014
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 217  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  44256068 aaatcacataaaatcctttgaaattcttaaaagtcagtgtgataaatcctttaaa 44256014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 48136616 - 48136527
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttctttttt--cgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||| ||||||||||| ||| ||||||||||||||||  | | ||| |||||||||| ||||||||| |||||||  ||||||||||||    
T  48136616 tatttttatcattcacgcttgcaagtttgttcttttttttcccaaaaattcattgaattctttgaaattttaaaattccataaaatcctt 48136527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 39029039 - 39029100
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||| |||||||||||||||||||  ||| | | |||||||||||||||||    
T  39029039 aaagtcttttaaaatttcacagaatcaatacaatcttacacaatattttaaaatcttaaaga 39029100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 48136470 - 48136409
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | | |||||||||||| ||||    
T  48136470 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatattttaaaatcttgaaga 48136409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 510548 - 510607
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  510548 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 510607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 23102193 - 23102252
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  23102193 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 23102252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 28343212 - 28343271
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  28343212 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 28343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 40459941 - 40459881
Alignment:
Q  215 aaagtcttttaaaatctcacagaatc-aatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||| |||||||||   || |||||||||||||||||||||    
T  40459941 aaagtcttttaaaatctcacagaatcaaatacaatc--tcacagtcttttaaaatcttaaaga 40459881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 42677356 - 42677294
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||  |||| |||||||||||||  ||||| |||||||||||||| ||||    
T  42677356 taaagtcttttaaaattccacaaaatcaatacaatcacacaaaatcttttaaaatctttaaga 42677294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 47067686 - 47067720
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatc 249  Q
    |||||||||||||||||||||||||||||||||||    
T  47067686 aaagtcttttaaaatctcacagaatcaatacaatc 47067720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 34114649 - 34114588
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||   || |||||||||||||  |||||||||||||||||||| ||||    
T  34114649 aaagtcttttaaaatccttcaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 34114588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 29893858 - 29893917
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||| ||||||||| |||||||||||| |||||||| | ||||| ||||    
T  29893858 aaatcacataaaatcttttgaaatctttaaaagtcagtgtgataaattctttaaaatctt 29893917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 33383543 - 33383590
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||| ||||||| |||||||||||||| ||||||||| |||||||||    
T  33383543 aaatctcataaaagcctttgaaatccttgaaagtcagtgtgataaatc 33383590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 39784928 - 39785022
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatc 134  Q
    ||||||| | ||||| ||||||||||| | |||| |||| |||||||   ||||| ||||||||||  |||||||| |||||||| ||| |||||    
T  39784928 atttgttcattatttttatcattcacgctcgtaaatttgctctttttctcctaaaattcattgaatattttgaaattttaaaatcacatgaaatc 39785022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 44121168 - 44121134
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatc 249  Q
    ||||||||||||||||||||| |||||||||||||    
T  44121168 aaagtcttttaaaatctcacaaaatcaatacaatc 44121134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 21068342 - 21068403
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||| ||||||||||| ||| |||||||||||||  ||| |||| |||||||| |||||||    
T  21068342 aaagttttttaaaatctaacataatcaatacaatctcacacagtcatttaaaattttaaaga 21068403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 30889239 - 30889186
Alignment:
Q  223 ttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||| |||||||| | ||||| || |||||||||||||||| |||||    
T  30889239 ttaaaatctcatagaatcaacataatcctaccaagtcttttaaaatctcaaaga 30889186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 29586421 - 29586473
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    |||||||| ||| |||||||||||||||||| |||||||| | ||||| ||||    
T  29586421 ataaaatcttttaaaatccttaaaagtcagtgtgataaattctttaaaatctt 29586473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 86; Significance: 4e-41; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 57442 - 57305
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  57442 atttgttcattatttgtatcattcacgcttgtaagtttgttcttttttctctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 57343  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| |||| |||||||||||  |||||||    
T  57342 aaatccttaaaagtcagcgtgataaatcctttaaaatc 57305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 57278 - 57220
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaa 273  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  57278 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaa 57220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 57362 - 57303
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||| ||||| ||||    
T  57362 aaatcacataaaatcctttgaaatccttaaaagtcagcgtgataaatcctttaaaatctt 57303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 4e-41; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 10728399 - 10728262
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  10728399 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 10728300  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  10728299 aaatccttaaaaatcagtgtgataaatcctttaaaatc 10728262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 20833719 - 20833856
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||||     
T  20833719 atttgttcattatttttatcattcacgcttgtaagtttgttcttttttccctaaaattcattgaattctttgaaattttaaaatcacataaaatcctttg 20833818  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  20833819 aaatccttaaaagtcagtgtgataaatcctttaaaatc 20833856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 26108129 - 26108266
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| || |||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  26108129 atttgttcattatttttatcattcacgcttttaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 26108228  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||||||||||||||||||||  |||||||    
T  26108229 aaatccttaaaattcagtgtgataaatcctttaaaatc 26108266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 31645636 - 31645499
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  31645636 atttgttcattatttttatcattcacgcttgtaagtttgttcttttttccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 31645537  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||| |||||| ||||||||||||||||  |||||||    
T  31645536 aaatctttaaaagtcagtgtgataaatcctttaaaatc 31645499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 44905219 - 44905103
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  44905219 tatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctttaaaatccttaa 44905120  T
Q  150 aattcagtgtgataaat 166  Q
    || ||||||||||||||    
T  44905119 aagtcagtgtgataaat 44905103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 51737140 - 51737013
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||| ||||||     
T  51737140 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaagtcctttg 51737041  T
Q  140 aaatccttaaaattcagtgtgataaatc 167  Q
    |||||||||||| |||||||||||||||    
T  51737040 aaatccttaaaagtcagtgtgataaatc 51737013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 18750455 - 18750592
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| || |||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  18750455 atttgttcattatttttaacattcacgcttgtaagtttgttctttttaccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 18750554  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  18750555 aaatccttaaaagtcggtgtgataaatcctttaaaatc 18750592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 34483477 - 34483340
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| || ||||||||||||||||| |||||||| |||||||||||||     
T  34483477 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcctttgaaattttaaaatcacataaaatcctttg 34483378  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  34483377 aaatccttaaaagtctgtgtgataaatcctttaaaatc 34483340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 38683439 - 38683566
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgct-aaagttcattgaatcctttgaaatattaaaatctcataaaatccttt 138  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||| | || ||| |||||||||||||||||||| ||||||||  ||||||||||||    
T  38683439 atttgtttactaattttatcattcacggttgtaagtttgttttttttccccttaaaattcattgaatcctttgaaattttaaaatcctataaaatccttt 38683538  T
Q  139 aaaatccttaaaattcagtgtgataaat 166  Q
    |||||| |||||| ||||||||||||||    
T  38683539 aaaatctttaaaaatcagtgtgataaat 38683566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 37455660 - 37455797
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||   ||||| |||||||||||| ||||||| ||||||||  ||||||||||||     
T  37455660 atttgtttattatttttatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatccattgaaattttaaaatcatataaaatcctttg 37455759  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| |||||| |||||||||  |||||||    
T  37455760 aaatccttaaaagtcagtgcgataaatcctttaaaatc 37455797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 44707785 - 44707882
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| || ||||||||||||    
T  44707785 atttgtttactatttctatcattcatggttgtaagtttgttctttttccactaaaattcattgaatcctttgaaatattaaattcccataaaatcctt 44707882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 52617359 - 52617222
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||| ||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||| |||     
T  52617359 atttgttcattatttttatcattcacgcttgaaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttttg 52617260  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||||||| || ||||||||||||||||  |||||||    
T  52617259 aaatccttataagtcagtgtgataaatcctttaaaatc 52617222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 17947050 - 17947177
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||||||  ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  17947050 tatttttatcattcacacttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctttgaaatccttaa 17947149  T
Q  150 aattcagtgtgataaatcccataaaatc 177  Q
    || ||| ||||||||||||  |||||||    
T  17947150 aagtcattgtgataaatcctttaaaatc 17947177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 27239584 - 27239466
Alignment:
Q  59 cattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaattcagtg 158  Q
    |||||||| ||||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||| ||||||||||||| |||| ||||||| ||||||    
T  27239584 cattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttaaaattttaaaatcacataaaatcctttgaaattcttaaaagtcagtg 27239485  T
Q  159 tgataaatcccataaaatc 177  Q
    ||||||||||  |||||||    
T  27239484 tgataaatcctttaaaatc 27239466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 39841828 - 39841691
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||| | |||||||| |||||||||| | ||||| |||| ||||||||||||||| |||||||| ||||||||| |||     
T  39841828 atttgttcattatttttatcattcatgcttgtaagtgtgttctttttcccctaaaattcactgaatcctttgaaattttaaaatcccataaaatcatttg 39841729  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  39841728 aaatccttaaaagtcagtgtgataaatccattaaaatc 39841691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 54629672 - 54629799
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| || |||||||||||||||  | ||||| ||| |||||||||||||||  |||||||| |||||||||||||     
T  54629672 atttgttcattatttttatcattcacgcttataagtttgttcttttccccctaaaattctttgaatcctttgaaaatttaaaatcacataaaatcctttg 54629771  T
Q  140 aaatccttaaaattcagtgtgataaatc 167  Q
    |||||||||||| |||||||||||||||    
T  54629772 aaatccttaaaagtcagtgtgataaatc 54629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 36673532 - 36673404
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  36673532 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 36673433  T
Q  140 aaatccttaaaattcagtgtgataaatcc 168  Q
    |||||||||||| || |||||||||||||    
T  36673432 aaatccttaaaagtctgtgtgataaatcc 36673404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 10661009 - 10661146
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||| | |||||||| |||||||| ||| |||||||||     
T  10661009 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaaccttttgaaattttaaaatcacatgaaatcctttg 10661108  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  10661109 aaatccttaaaagtctgtgtgataaatcctttaaaatc 10661146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 23752766 - 23752669
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  23752766 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 23752669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 50902698 - 50902596
Alignment:
Q  75 tttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaattcagtgtgataaatcccataaa 174  Q
    |||||||||||| | ||||| ||||||||||| |||||||| |||||||| | ||||||||||| |||||||||||| ||||||||||||||||  ||||    
T  50902698 tttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacgtaaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaa 50902599  T
Q  175 atc 177  Q
    |||    
T  50902598 atc 50902596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 40897943 - 40898070
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |          ||||||| ||||    
T  40897943 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattt----------taaaatcattta 40898032  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  40898033 aaatccttaaaagtcagtgtgataaatcctttaaaatc 40898070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 52617195 - 52617134
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  52617195 aaagtcttttaaaatctcacagaatcaatacaatctcacaaagtcttttaaaatcttaaaga 52617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 11432368 - 11432479
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||| | ||||||||||| ||||||| | || || || |||||||| |||||||| |||||||| ||| ||||||||||    
T  11432368 atttgttcattatttttatcattcatgcttgtaagtttgctctttttcccctcaaatttattgaatcttttgaaattttaaaatcacatgaaatccttta 11432467  T
Q  140 aaatccttaaaa 151  Q
    ||||||||||||    
T  11432468 aaatccttaaaa 11432479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 52811172 - 52811247
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaat 115  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||||||||    
T  52811172 atttgttcattatttctatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaat 52811247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 18750619 - 18750680
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  18750619 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 18750680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 23360555 - 23360616
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  23360555 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 23360616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 23367395 - 23367456
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  23367395 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 23367456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 23752612 - 23752551
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  23752612 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 23752551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 30589823 - 30589884
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  30589823 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 30589884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 31645472 - 31645411
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  31645472 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 31645411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 34483313 - 34483252
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  34483313 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 34483252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 36054118 - 36054057
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  36054118 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 36054057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 36673368 - 36673307
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  36673368 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 36673307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 44905065 - 44905004
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  44905065 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 44905004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 45254663 - 45254602
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  45254663 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 45254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 45254817 - 45254720
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||||||||| | ||||||||||||| ||||| | ||||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  45254817 atttgttcattatttttatcattcatgcttgtaagtttgttttttttcccctaaaattcattgaattctttgaaattttaaaatcacataaaatcctt 45254720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 46223414 - 46223353
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  46223414 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 46223353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 48379972 - 48380069
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| || ||| |||| ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  48379972 atttgttcattatttttaacatccacgcttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctt 48380069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 50761470 - 50761389
Alignment:
Q  56 tatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||||||| |||||||||||||||||||   ||||| |||||||||||||||||||| |||||||| ||| ||||||||    
T  50761470 tatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacatgaaatcctt 50761389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 39039062 - 39039121
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  39039062 aaagtcttttaaaatctcacagaatcaatacaatctcacaaagtcatttaaaatcttaaa 39039121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 44707921 - 44707984
Alignment:
Q  213 ttaaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||    
T  44707921 ttaaagtcttttaaaatctcacagaatcggtacaatctcacaaagtcttttaaaatcttaaaga 44707984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 50902528 - 50902469
Alignment:
Q  217 agtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  50902528 agtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 50902469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 45214193 - 45214131
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||    
T  45214193 taaagtcttttaaaatctcacaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 45214131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 2124813 - 2124760
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaat 268  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  2124813 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaat 2124760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 10728235 - 10728174
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  10728235 aaagtcttttaaaatctcacagaatcaatacaatctcacacattcttttaaaatcttaaaga 10728174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 11432533 - 11432594
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  11432533 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaattttaaaga 11432594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 26556845 - 26556906
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  26556845 aaagtcttttaaaatcccacaaaatcaatacaatcgaacaaagtcttttaaaatctttaaga 26556906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 50761332 - 50761271
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  50761332 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 50761271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 50899554 - 50899493
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||||    
T  50899554 aaagtcttttaaaatccgacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 50899493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 51736976 - 51736915
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||   || |||||||||||||||||||||    
T  51736976 aaagtcttttaaaatctcacagaatcaatacaatctcgcatagtcttttaaaatcttaaaga 51736915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 54629836 - 54629897
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||| ||||||||||    
T  54629836 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaacatcttaaaga 54629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 23697949 - 23698005
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  23697949 aaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23698005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 23716404 - 23716460
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  23716404 aaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 23734860 - 23734916
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  23734860 aaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23734916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 17947204 - 17947263
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||||    
T  17947204 aaagtcttttaaaatctcacagaatcaatacaatctcacatagtcttttaaaattttaaa 17947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 20833799 - 20833858
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  20833799 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 20833858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 39841748 - 39841689
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||    
T  39841748 aaatcccataaaatcatttgaaatccttaaaagtcagtgtgataaatccattaaaatctt 39841689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 50902569 - 50902514
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  50902569 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatct 50902514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 39038902 - 39039025
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||| ||| ||||||||||||||| | ||| |    |  |||||||||||||| |||||||| ||||||||| |||     
T  39038902 atttgttcattatttttatcatccacgcttgaaagtttgttctttttcccctata----agagaatcctttgaaattttaaaatcacataaaatcttttg 39038997  T
Q  140 aaatccttaaaattcagtgtgataaatc 167  Q
    ||||||||| || |||||||||||||||    
T  39038998 aaatccttataagtcagtgtgataaatc 39039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 52811371 - 52811425
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaa 273  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  52811371 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaa 52811425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 10661173 - 10661234
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||| |||||||||||||||||||  ||| | |||||||||||||||||||    
T  10661173 aaagtcttttaaaatatcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 10661234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 24149945 - 24149884
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||| ||||    
T  24149945 aaagtcttttaaaatcccacaaaatcaatataatccaacaaagtcatttaaaatcttcaaga 24149884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 38628928 - 38628875
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaat 268  Q
    |||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  38628928 aaagtcttttaaaatcccacaaaatcaatacaattcaacaaagtcttttaaaat 38628875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 39841664 - 39841603
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||   || |||||||||||||||||||||    
T  39841664 aaagtcttttaaaatctcacataatcaatacaatctcgcacagtcttttaaaatcttaaaga 39841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 19551257 - 19551205
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||||||||||    
T  19551257 tcttttaaaatcccacaaaatcaatacaatccaataaagtcttttaaaatctt 19551205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 23754523 - 23754579
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    ||||| |||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  23754523 aaagtattttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23754579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 10728319 - 10728260
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||    
T  10728319 aaatcacataaaatcctttgaaatccttaaaaatcagtgtgataaatcctttaaaatctt 10728260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 17947120 - 17947179
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||||| ||||| ||||    
T  17947120 aaatcacataaaatcctttgaaatccttaaaagtcattgtgataaatcctttaaaatctt 17947179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 18750535 - 18750594
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  18750535 aaatcacataaaatcctttgaaatccttaaaagtcggtgtgataaatcctttaaaatctt 18750594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 26108209 - 26108268
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||    
T  26108209 aaatcacataaaatcctttgaaatccttaaaattcagtgtgataaatcctttaaaatctt 26108268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 27239523 - 27239464
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||    
T  27239523 aaatcacataaaatcctttgaaattcttaaaagtcagtgtgataaatcctttaaaatctt 27239464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 31645556 - 31645497
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||||||| ||||| ||||    
T  31645556 aaatcacataaaatcctttgaaatctttaaaagtcagtgtgataaatcctttaaaatctt 31645497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 34483397 - 34483338
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  34483397 aaatcacataaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 34483338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 48380126 - 48380185
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||| |||||||||||||||||||||||||||||  ||| | |||||||||||||||||    
T  48380126 aaagttttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 48380185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 50902645 - 50902594
Alignment:
Q  171 taaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  50902645 taaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 50902594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 52811266 - 52811341
Alignment:
Q  102 gaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||| ||||||| |||||||| ||||||||||||| |||||||||||| ||| ||| ||||||||  |||||||    
T  52811266 gaatccgttgaaattttaaaatcacataaaatcctttgaaatccttaaaagtcaatgtaataaatcctttaaaatc 52811341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 54629752 - 54629799
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  54629752 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatc 54629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 52023258 - 52023176
Alignment:
Q  42 ttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatc 124  Q
    |||||||||| || ||||||| ||||||||||||||||||||| |   ||||| || ||||||| ||||||||| ||||||||    
T  52023258 ttgtttactaattttatcattaacggttgtaagtttgttctttatctcctaaaatttattgaatactttgaaattttaaaatc 52023176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 20833884 - 20833945
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||| ||||||||||||| |||||||||||||||||  ||| | |||||||||||||||||||    
T  20833884 aaaatcttttaaaatcttacagaatcaatacaatcttacacaatcttttaaaatcttaaaga 20833945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 26292671 - 26292611
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||| ||||    
T  26292671 aaagtcttttaaaattccacaaaat-aatacaatccaacaaagtcttttaaaatcttcaaga 26292611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 37455747 - 37455799
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||| ||||    
T  37455747 ataaaatcctttgaaatccttaaaagtcagtgcgataaatcctttaaaatctt 37455799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 10661089 - 10661148
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  10661089 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 10661148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 34290275 - 34290220
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    |||||||||||||||| || | |||||||||||||  |||||||||||||||||||    
T  34290275 aaagtcttttaaaatcccataaaatcaatacaatcacacaaagtcttttaaaatct 34290220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 51737060 - 51737013
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  51737060 aaatcacataaagtcctttgaaatccttaaaagtcagtgtgataaatc 51737013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 52617279 - 52617220
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||| ||||||||||||| |||||||| |||||||||| ||||| ||||    
T  52617279 aaatcacataaaatcttttgaaatccttataagtcagtgtgataaatcctttaaaatctt 52617220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 52811284 - 52811343
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||| | | |||||||| ||||| ||||    
T  52811284 aaatcacataaaatcctttgaaatccttaaaagtcaatgtaataaatcctttaaaatctt 52811343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 36673452 - 36673398
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 217  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| |||||    
T  36673452 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaa 36673398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 40898021 - 40898115
Alignment:
Q  171 taaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    ||||||| ||| |||||||||||||||||| ||||||||||          |||||||||||||||||||||  |||||  ||| |||||||||||||||    
T  40898021 taaaatcatttaaaatccttaaaagtcagtgtgataaatcc----------tttaaaatctcacagaatcaa-gcaatctcacacagtcttttaaaatct 40898109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 44905149 - 44905103
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaat 209  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  44905149 aaatcacataaaatcctttaaaatccttaaaagtcagtgtgataaat 44905103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 46251308 - 46251246
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||| | |  ||||||||||  |||||||||||||||||||| ||||    
T  46251308 taaagtcttttaaaatctcaaaaagccaatacaatcacacaaagtcttttaaaatctttaaga 46251246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 26004957 - 26004904
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaat 268  Q
    |||||||||||||||| |||| |||||||||||| ||||||| ||| |||||||    
T  26004957 aaagtcttttaaaatcccacaaaatcaatacaattcaacaaactctcttaaaat 26004904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 53183187 - 53183126
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||| | ||||||||||||||   ||||| ||||||||||||| |||||    
T  53183187 aaagtcttttaaaatcttaaagaatcaatacaatattacaaaatcttttaaaatctcaaaga 53183126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 27239439 - 27239375
Alignment:
Q  215 aaagtcttttaaaatctcacagaa-----tcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||||||||||||||||||||||     |||||||||||  ||| |||||||||||||||||||    
T  27239439 aaagtcttttaaaatctcacagaagacaatcaatacaatcttacacagtcttttaaaatcttaaa 27239375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 5493033 - 5493092
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||| |||||||||||||| |||||||||||||   ||||| ||||||||||| |||||    
T  5493033 aaagtattttaaaatctcactgaatcaatacaatttcacaaaatcttttaaaattttaaa 5493092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 39038978 - 39039025
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  39038978 aaatcacataaaatcttttgaaatccttataagtcagtgtgataaatc 39039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 244
Target Start/End: Original strand, 37455824 - 37455853
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaata 244  Q
    ||||||||||||||||||||||||||||||    
T  37455824 aaagtcttttaaaatctcacagaatcaata 37455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 50761398 - 50761357
Alignment:
Q  181 tgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    |||||||||||||||||||| |||||||||| ||||| ||||    
T  50761398 tgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 50761357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 13832941 - 13832804
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  13832941 atttgttcattatttttatcattcacgcttgtaagtttgttcttttttccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 13832842  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  13832841 aaatccttaaaagtcggtgtgataaatcctttaaaatc 13832804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 25288977 - 25289114
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||   ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  25288977 atttgttcattatttctatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 25289076  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  25289077 aaatccttaaaagtcagtgtgataaatcctttaaaatc 25289114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 43079302 - 43079439
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||| |||||||| ||||     
T  43079302 atttgttcattatttttatcattcacgcttgtaagtttgttctttttttcctaaaattcattgaatcctttgaaattttaaaatcacataaaattctttg 43079401  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  43079402 aaatccttaaaagtcagtgtgataaatcctttaaaatc 43079439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 214842 - 214716
Alignment:
Q  51 atttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaa 150  Q
    |||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||| |||| ||||||    
T  214842 atttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcccataaaatcctttgaaattcttaaa 214743  T
Q  151 attcagtgtgataaatcccataaaatc 177  Q
    | ||||||| ||||||||| |||||||    
T  214742 agtcagtgtcataaatcccttaaaatc 214716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 3575666 - 3575803
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||| |||||   ||||| ||||||||||| |||||||| |||||||| |||||||||||||     
T  3575666 atttgttcattatttttatcattcacgtttgtaagtttgttttttttctcctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctttg 3575765  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  3575766 aaatccttaaaagtcagtgtgataaatcctttaaaatc 3575803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 28739388 - 28739267
Alignment:
Q  56 tatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaattca 155  Q
    ||||||||||| ||||||||||||||||||| | |||||  ||||||||||||||||||| ||||||||  |||||||||||| |||||||||||| |||    
T  28739388 tatcattcacgcttgtaagtttgttctttttcccctaaaaatcattgaatcctttgaaattttaaaatcatataaaatcctttgaaatccttaaaagtca 28739289  T
Q  156 gtgtgataaatcccataaaatc 177  Q
    |||||||||||||  |||||||    
T  28739288 gtgtgataaatcctttaaaatc 28739267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 28845400 - 28845537
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||| |||||||||| |||||||| | ||||| || ||||||||||||||||| |||||||| |||||||||||||     
T  28845400 atttgttcattatttttatcatccacgcttgtaagtttcttctttttcccctaaaatttattgaatcctttgaaattttaaaatcacataaaatcctttg 28845499  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  28845500 aaatccttaaaagtcagtgtgataaatcctttaaaatc 28845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 3464425 - 3464562
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||| ||| ||||||||||||||||| ||||| || ||||||||||||||||| |||||||| |||||||||||||     
T  3464425 atttgttcattatttttatcatccacgcttgaaagtttgttcttttttccctaaaatttattgaatcctttgaaattttaaaatcacataaaatcctttg 3464524  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||| ||||||| || |||||||||||||  |||||||    
T  3464525 aaattcttaaaagtctgtgtgataaatcctttaaaatc 3464562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 10658253 - 10658390
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||| | |||||||||| || ||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  10658253 atttgttcattatttttatcattcatgcttgtaagtttattttttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 10658352  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||| |||||| ||||||||||||||||  |||||||    
T  10658353 aaatctttaaaagtcagtgtgataaatcctttaaaatc 10658390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 33136416 - 33136553
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||| ||||||| ||| ||||||||| ||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  33136416 atttgttcattatttttattattcacgcttgaaagtttgttgtttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 33136515  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    | |||||||||| ||||||||||||||||  |||||||    
T  33136516 atatccttaaaagtcagtgtgataaatcctttaaaatc 33136553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 379751 - 379879
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||  ||||||||| ||||||||  ||||||||||||     
T  379751 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaactctttgaaattttaaaatcatataaaatcctttg 379850  T
Q  140 aaatccttaaaattcagtgtgataaatcc 168  Q
    |||||||||||| || |||||||||||||    
T  379851 aaatccttaaaagtcggtgtgataaatcc 379879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 18178094 - 18178231
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| ||||||||||| ||| |||| |||||||| ||| |||||||||     
T  18178094 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaattcattgaatcttttaaaattttaaaatcacatgaaatcctttg 18178193  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  18178194 aaatccttaaaagtctgtgtgataaatcctttaaaatc 18178231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 26789607 - 26789744
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  26789607 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 26789706  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  26789707 aaatccttaaaagtctgtgtgataaatcctttaaaatc 26789744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 7027726 - 7027863
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||| ||     
T  7027726 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatccgttg 7027825  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  7027826 aaatccttaaaagtctgtgtgataaatcctttaaaatc 7027863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 6223956 - 6223860
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  6223956 atttgtttattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatccttt-aaattttaaaatcacataaaatcctt 6223860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 45547893 - 45547954
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  45547893 aaagtcttttaaaatctcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 45547954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 7487065 - 7487004
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  7487065 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 7487004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 13832777 - 13832716
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  13832777 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 13832716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 18178258 - 18178319
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  18178258 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 18178319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 25289141 - 25289202
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  25289141 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 25289202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 26789771 - 26789832
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  26789771 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 26789832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 29941867 - 29941928
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  29941867 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 29941928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 7027891 - 7027952
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  7027891 aaagtctattaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 7027952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 28845564 - 28845625
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||    
T  28845564 aaagtcttttaaaatctcacagaatcaatacaatctcacatagtctttaaaaatcttaaaga 28845625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 33136580 - 33136641
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||    
T  33136580 aaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaaga 33136641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 6288664 - 6288608
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    ||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  6288664 aaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 6288608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 214773 - 214714
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||    
T  214773 aaatcccataaaatcctttgaaattcttaaaagtcagtgtcataaatcccttaaaatctt 214714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 3575746 - 3575805
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  3575746 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 3575805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 25289057 - 25289116
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  25289057 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 25289116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 28845480 - 28845539
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  28845480 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 28845539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 3464572 - 3464634
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||| |||||||| ||||  ||| |||||||||||||||||||||    
T  3464572 taaagtcttttaaaatctcacaaaatcaatagaatctgacacagtcttttaaaatcttaaaga 3464634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 43079472 - 43079530
Alignment:
Q  218 gtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||    
T  43079472 gtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaaga 43079530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 28739317 - 28739265
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  28739317 ataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 28739265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 10658333 - 10658392
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||||||| ||||| ||||    
T  10658333 aaatcacataaaatcctttgaaatctttaaaagtcagtgtgataaatcctttaaaatctt 10658392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 13832861 - 13832802
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  13832861 aaatcacataaaatcctttgaaatccttaaaagtcggtgtgataaatcctttaaaatctt 13832802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 33136496 - 33136555
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||| ||||    
T  33136496 aaatcacataaaatcctttgatatccttaaaagtcagtgtgataaatcctttaaaatctt 33136555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 43079382 - 43079441
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||    
T  43079382 aaatcacataaaattctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 43079441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 14919861 - 14919811
Alignment:
Q  218 gtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaat 268  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  14919861 gtcttttaaaatttcacaaaatcaatacaatccaacaaaatcttttaaaat 14919811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 17326778 - 17326732
Alignment:
Q  105 tcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaa 151  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  17326778 tcctttgaaatattaaaatctcataaaattctttaaaatctttaaaa 17326732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 36597750 - 36597697
Alignment:
Q  218 gtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||||||||||| |||||||||||| || |||| ||||||||||||||    
T  36597750 gtcttttaaaatctcacaaaatcaatacaattcatcaaaatcttttaaaatctt 36597697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 2373875 - 2373915
Alignment:
Q  169 cataaaatcctttgaaatccttaaaagtcagtatgataaat 209  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  2373875 cataaaatcctttgaaatccttaaaagtcggtatgataaat 2373915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 35171493 - 35171428
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatcc----aacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| ||||||||||||||    ||| ||||||||||||||||| ||||    
T  35171493 aaagtcttttaaaatctcacaaaatcaatacaatccaacgaacgaagtcttttaaaatcttcaaga 35171428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 35906945 - 35907005
Alignment:
Q  216 aagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||| ||| |||||| |||||  ||||||| ||||||||||||||||    
T  35906945 aagtcttttaaaatctcatagagtcaatataatcctgcaaagtcatttaaaatcttaaaga 35907005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 18178174 - 18178233
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  18178174 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 18178233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 26789687 - 26789746
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  26789687 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 26789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 45497489 - 45497544
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatc 269  Q
    |||||||||||||||||||| | |||||||||||||  ||||| ||||||||||||    
T  45497489 taaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaatcttttaaaatc 45497544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 45505231 - 45505286
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatc 269  Q
    |||||||||||||||||||| | |||||||||||||  ||||| ||||||||||||    
T  45505231 taaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaatcttttaaaatc 45505286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 379838 - 379884
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaa 216  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||    
T  379838 ataaaatcctttgaaatccttaaaagtcggtgtgataaatcctttaa 379884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 2289261 - 2289323
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||   || |||||||||||||  |||||||||||||||||||| ||||    
T  2289261 taaagtcttttaaaatccatcaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 2289323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 28739240 - 28739206
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatc 249  Q
    |||||||||||||||||||||||||||||||||||    
T  28739240 aaagtcttttaaaatctcacagaatcaatacaatc 28739206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 2373859 - 2373915
Alignment:
Q  110 tgaaatattaaaatctcataaaatcctttaaaatccttaaaattcagtgtgataaat 166  Q
    |||||| ||||||| |||||||||||||| |||||||||||| || || ||||||||    
T  2373859 tgaaatgttaaaatttcataaaatcctttgaaatccttaaaagtcggtatgataaat 2373915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 3464505 - 3464553
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcc 211  Q
    ||||| |||||||||||||||||| |||||||||| || ||||||||||    
T  3464505 aaatcacataaaatcctttgaaattcttaaaagtctgtgtgataaatcc 3464553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 7027806 - 7027865
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| |||||| |||||||||||||||||| || |||||||||| ||||| ||||    
T  7027806 aaatcacatgaaatccgttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 7027865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 27979874 - 27979936
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||| || || | ||| |||||||||  |||||||||||||||||||| ||||    
T  27979874 taaagtcttttaaattcccataaaattaatacaatcacacaaagtcttttaaaatctttaaga 27979936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 28066404 - 28066466
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||| || || | ||| |||||||||  |||||||||||||||||||| ||||    
T  28066404 taaagtcttttaaattcccataaaattaatacaatcacacaaagtcttttaaaatctttaaga 28066466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 10658423 - 10658475
Alignment:
Q  222 tttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    ||||||| |||||| |||||||||||||  | | |||||||||||||||||||    
T  10658423 tttaaaaactcacaaaatcaatacaatctcatacagtcttttaaaatcttaaa 10658475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 38821359 - 38821303
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    ||||||||||||||||  ||| |||||||| ||||  ||||| ||||||||||||||    
T  38821359 aaagtcttttaaaatccaacaaaatcaatataatctcacaaaatcttttaaaatctt 38821303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 37857700 - 37857828
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  37857700 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 37857799  T
Q  140 aaatccttaaaattcagtgtgataaatcc 168  Q
    |||||||||||| ||||||||||||||||    
T  37857800 aaatccttaaaagtcagtgtgataaatcc 37857828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 32498723 - 32498850
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  32498723 tatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttgaaatccttaa 32498822  T
Q  150 aattcagtgtgataaatcccataaaatc 177  Q
    || ||||||||||||||||  |||||||    
T  32498823 aagtcagtgtgataaatcctttaaaatc 32498850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 43166055 - 43165918
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| | |||||||||||||||||||  |||| |||||| ||||||||||||| |||||||| |||||||||||||     
T  43166055 atttgttcattatttttatcattcacgctggtaagtttgttcttttttccataaaattcattaaatcctttgaaattttaaaatcacataaaatcctttg 43165956  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||  |||||||    
T  43165955 aaatccttaaaagtcagtgtgataaatcctttaaaatc 43165918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 165
Target Start/End: Complemental strand, 43307885 - 43307760
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||| ||||||||||    
T  43307885 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacattaaatccttta 43307786  T
Q  140 aaatccttaaaattcagtgtgataaa 165  Q
    |||||||||||| | |||||||||||    
T  43307785 aaatccttaaaagtgagtgtgataaa 43307760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 9287861 - 9287743
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||| ||||||||| ||| ||||||||||    
T  9287861 tatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcttttgaaatccttaa 9287762  T
Q  150 aattcagtgtgataaatcc 168  Q
    || ||||||||||||||||    
T  9287761 aagtcagtgtgataaatcc 9287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 7467144 - 7467281
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||| ||||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||| |||||||||||||     
T  7467144 atttgttcattatttttatcatccacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttaaaattttaaaatcacataaaatcctttg 7467243  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| |||| |||||||||||  |||||||    
T  7467244 aaatccttaaaagtcagagtgataaatcctttaaaatc 7467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 18305349 - 18305212
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| |  |||| || ||||||||||||||||| |||||||| |||||||||||||     
T  18305349 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccttaaaatttattgaatcctttgaaattttaaaatcacataaaatcctttg 18305250  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| | ||||||||||||||  |||||||    
T  18305249 aaatccttaaaagttagtgtgataaatcctttaaaatc 18305212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 19717253 - 19717116
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||| |||     
T  19717253 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcatttg 19717154  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || || ||||||||||  |||||||    
T  19717153 aaatccttaaaagtctgtatgataaatcctttaaaatc 19717116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 44725169 - 44725032
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| || |||||||| |||||||| |||||||| ||| |||||||||     
T  44725169 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctttg 44725070  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || |||||||||||||  |||||||    
T  44725069 aaatccttaaaagtctgtgtgataaatcctttaaaatc 44725032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 26856928 - 26857056
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||  | ||||||||||| |||||||| |||||||||||||     
T  26856928 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcatcaagtcctttgaaattttaaaatcacataaaatcctttg 26857027  T
Q  140 aaatccttaaaattcagtgtgataaatcc 168  Q
    ||||| |||||| ||||||||||||||||    
T  26857028 aaatctttaaaagtcagtgtgataaatcc 26857056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 42304989 - 42304862
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaa 149  Q
    ||||| ||||||| ||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  42304989 tatttttatcatttacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttgaaatccttaa 42304890  T
Q  150 aattcagtgtgataaatcccataaaatc 177  Q
    || || |  ||||||||||  |||||||    
T  42304889 aagtctgaatgataaatcctttaaaatc 42304862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 18958106 - 18957969
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||  ||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||  ||||||||||||     
T  18958106 atttgttcattatttttatcattcacacttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcatataaaatcctttg 18958007  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||  | ||||||||||  |||||||    
T  18958006 aaatccttaaaagtctatatgataaatcctttaaaatc 18957969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 20831320 - 20831215
Alignment:
Q  72 aagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaattcagtgtgataaatcccat 171  Q
    ||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||  ||| |||||||||||| ||||||||||||||||  |    
T  20831320 aagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaattatttgaaatccttaaaagtcagtgtgataaatccttt 20831221  T
Q  172 aaaatc 177  Q
    ||||||    
T  20831220 aaaatc 20831215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 16365111 - 16365209
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatcctta 148  Q
    ||||| ||||||||||| ||| ||||||||||| ||| | ||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  16365111 tatttttatcattcacgcttgaaagtttgttctatttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttttaaaatcctta 16365209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 39466884 - 39466797
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||| ||||||||||| |||||||||||||||||||   ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  39466884 tatttttatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 39466797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 16365263 - 16365324
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16365263 aaagtcttttaaaatctcacagaatcaatacaatcgcacaaagtcttttaaaatcttaaaga 16365324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 40012547 - 40012462
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatct 125  Q
    |||| ||||||| || |||||||||||||||||| |||||||||||| | ||||| |||||||||||||||||||| |||||||||    
T  40012547 atttttttactaattttatcattcacggttgtaaatttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatct 40012462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 4030552 - 4030491
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  4030552 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 4030491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 4656054 - 4656115
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  4656054 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 4656115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 7149012 - 7149073
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  7149012 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 7149073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 9458485 - 9458546
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  9458485 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 9458546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 10795483 - 10795422
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  10795483 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 10795422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 14781356 - 14781295
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  14781356 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 14781295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 18305185 - 18305124
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  18305185 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 18305124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 19717089 - 19717028
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  19717089 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 19717028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 40264383 - 40264322
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  40264383 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 40264322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 43489898 - 43489959
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  43489898 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 43489959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 44725005 - 44724944
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  44725005 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 44724944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 39371273 - 39371217
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  39371273 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 39371217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 2113766 - 2113821
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  2113766 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 2113821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 7467292 - 7467366
Alignment:
Q  103 aatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||||| |||| |||||||||||  |||||||    
T  7467292 aatcctttgaaattttaaaatcacataaaatcctttgaaatccttaaaagtcagagtgataaatcctttaaaatc 7467366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 42304852 - 42304790
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||    
T  42304852 taaagtcttttaaaatctcacaaaatcaatacaatctcacacagtcttttaaaatcttaaaga 42304790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 43307763 - 43307701
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||||    
T  43307763 taaagtcttttaaaatctcacagaatcaatccaatctcacacagtcttttaaaatcttaaaga 43307701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 7467393 - 7467454
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||    
T  7467393 aaagtcttttaaattctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 7467454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 14781510 - 14781413
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  14781510 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 14781413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 18957938 - 18957881
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  18957938 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 18957881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 20831184 - 20831127
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  20831184 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 20831127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 39466742 - 39466681
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||    
T  39466742 aaagtcttttaaaatctcacagaatcaatacaatatcacagagtcttttaaaatcttaaaga 39466681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 42275922 - 42275983
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||| ||||    
T  42275922 aaagtcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 42275983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 43604483 - 43604422
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  43604483 aaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 43604422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 41385978 - 41385922
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  41385978 aaagtcttttaaaatcccacaaaattaatacaatccaacaaagtcttttaaaatctt 41385922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 10294735 - 10294660
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaat 115  Q
    ||||||| | ||||| ||||||||||| |||||||||||||  |||||| ||||| ||||||||||||||||||||    
T  10294735 atttgttcattatttttatcattcacgcttgtaagtttgtttgtttttccctaaaattcattgaatcctttgaaat 10294660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 31626286 - 31626345
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||    
T  31626286 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 31626345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 32498793 - 32498852
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  32498793 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 32498852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 43165975 - 43165916
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  43165975 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 43165916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 31626130 - 31626259
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgc-taaagttcattgaatcctttgaaatattaaaatctcataaaatccttt 138  Q
    ||||||| | ||||| ||||||||||| || |||||||||||||||||| | |||| |||||||||         || |||||||| ||||||||| |||    
T  31626130 atttgttcattatttttatcattcacgcttataagtttgttcttttttcccctaaaattcattgaa---------attttaaaatcacataaaatctttt 31626220  T
Q  139 aaaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
     |||||||||||| ||||||||||||||||  |||||||    
T  31626221 gaaatccttaaaagtcagtgtgataaatcctttaaaatc 31626259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 32498877 - 32498938
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||  |||||||||||||||  ||| |||||||||||||||||||||    
T  32498877 aaagtcttttaaaatctcttagaatcaatacaatctcacacagtcttttaaaatcttaaaga 32498938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 35143064 - 35143125
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||  ||| ||||||||||||||| |||||    
T  35143064 aaagtcttttaaaatctcacaaaatcaatacaatcttacagagtcttttaaaatctcaaaga 35143125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 37857864 - 37857922
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaag 275  Q
    |||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||    
T  37857864 aaagtcttttaaaatctcacagaatcaatacaatc--tcatagtcttttaaaatcttaaag 37857922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 38806028 - 38805971
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||| |||||    
T  38806028 tcttttaaaatctcatagaatcaatacaatcctaaaaagtcttttaaaatctcaaaga 38805971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 10294616 - 10294564
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaa 266  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  10294616 taaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaa 10294564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 37857780 - 37857828
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcc 211  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  37857780 aaatcacataaaatcctttgaaatccttaaaagtcagtgtgataaatcc 37857828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 7467224 - 7467283
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||| ||||| ||||    
T  7467224 aaatcacataaaatcctttgaaatccttaaaagtcagagtgataaatcctttaaaatctt 7467283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 7467309 - 7467368
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||| ||||| ||||    
T  7467309 aaatcacataaaatcctttgaaatccttaaaagtcagagtgataaatcctttaaaatctt 7467368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 18305269 - 18305210
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||    
T  18305269 aaatcacataaaatcctttgaaatccttaaaagttagtgtgataaatcctttaaaatctt 18305210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 19717173 - 19717114
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||    
T  19717173 aaatcacataaaatcatttgaaatccttaaaagtctgtatgataaatcctttaaaatctt 19717114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 31626202 - 31626261
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||    
T  31626202 aaatcacataaaatcttttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 31626261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 1605905 - 1605847
Alignment:
Q  218 gtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||| |||| ||||||||||||||  ||||||||||||||||||| ||||    
T  1605905 gtcttttaaaatcccacaaaatcaatacaatcctgcaaagtcttttaaaatcttcaaga 1605847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 9287791 - 9287737
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 217  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||    
T  9287791 aaatcacataaaatcttttgaaatccttaaaagtcagtgtgataaatcctttaaa 9287737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 18958019 - 18957967
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||| ||||    
T  18958019 ataaaatcctttgaaatccttaaaagtctatatgataaatcctttaaaatctt 18957967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 26857008 - 26857056
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcc 211  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  26857008 aaatcacataaaatcctttgaaatctttaaaagtcagtgtgataaatcc 26857056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 42304919 - 42304871
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcc 211  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  42304919 aaatcacataaaatcctttgaaatccttaaaagtctgaatgataaatcc 42304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 5266845 - 5266790
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||||||||||| |||| |||||||| ||||  |||||||||||||||||||||||    
T  5266845 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 5266790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 20831272 - 20831213
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||  |||||||||||||||||||||| |||||||||| ||||| ||||    
T  20831272 aaatcacataaaattatttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 20831213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 41964705 - 41964650
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    |||||||||||||||| |||| |||||||| ||| ||||||||| |||||||||||    
T  41964705 aaagtcttttaaaatcccacaaaatcaatataattcaacaaagttttttaaaatct 41964650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 44725089 - 44725030
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  44725089 aaatcacatgaaatcctttgaaatccttaaaagtctgtgtgataaatcctttaaaatctt 44725030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 28620661 - 28620723
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||| | |||||||||||||  ||||| | |||||||||||| ||||    
T  28620661 taaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaattttttaaaatctttaaga 28620723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 40012399 - 40012342
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||| |||| ||||||||  ||||| ||||||||||||| |||||    
T  40012399 tcttttaaaatctcacaaaatcgatacaatctcacaaactcttttaaaatctcaaaga 40012342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 10294672 - 10294624
Alignment:
Q  174 aatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||| ||||    
T  10294672 aatcctttgaaatccgtaaaagtcagtgtgataaatcctttaaaatctt 10294624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 246
Target Start/End: Complemental strand, 9287707 - 9287676
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaataca 246  Q
    ||||||||||||||||||||||||||||||||    
T  9287707 aaagtcttttaaaatctcacagaatcaataca 9287676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 14062471 - 14062525
Alignment:
Q  216 aagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatct 270  Q
    ||||||||||||||| || | |||||||| ||||  |||||||||||||||||||    
T  14062471 aagtcttttaaaatcccataaaatcaatagaatcacacaaagtcttttaaaatct 14062525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 43165886 - 43165856
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatc 249  Q
    |||||||||||||||||||||||||||||||    
T  43165886 tcttttaaaatctcacagaatcaatacaatc 43165856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 10128241 - 10128302
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||| ||| ||  |||||||| ||||| || ||||||||||| ||||    
T  10128241 aaagtcttttaaaatctcatagagtctttacaatcctacaaaatcatttaaaatcttgaaga 10128302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 9209888 - 9209944
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    ||||||||||||||||  ||| |||||||| ||||  ||||| ||||||||||||||    
T  9209888 aaagtcttttaaaatccaacaaaatcaatataatctcacaaaatcttttaaaatctt 9209944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 1151672 - 1151535
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||| ||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||| |||     
T  1151672 atttgttcattatttttatcaatcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttttg 1151573  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  1151572 aaatccttaaaagtcagtgtgataaatcccttaaaatc 1151535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 13926754 - 13926891
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| |||||||||||||||||||   ||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  13926754 atttgttcattatttttatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatccttta 13926853  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||| ||||||| ||||||||||||||||  |||||||    
T  13926854 aaattcttaaaagtcagtgtgataaatcctttaaaatc 13926891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 40013090 - 40012953
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||| ||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  40013090 atttgttcattatttttatcatttacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 40012991  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||||| || || ||||||||||  |||||||    
T  40012990 aaatccttaaaagtctgtatgataaatcctttaaaatc 40012953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 5949940 - 5950067
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||| ||||||||||||||||||| | ||||| ||||| |||||||||||||| |||||| | |||||||||||||     
T  5949940 atttgttcattatttttatcatccacgcttgtaagtttgttctttttcctctaaaattcatcgaatcctttgaaattttaaaaccccataaaatcctttg 5950039  T
Q  140 aaatccttaaaattcagtgtgataaatc 167  Q
    |||||||||||| |||||||||||||||    
T  5950040 aaatccttaaaagtcagtgtgataaatc 5950067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 4549638 - 4549501
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| |||||| |||| |||||||||||||||||||   ||||| |||||||||||||||||||| |||||||| ||||||||| |||     
T  4549638 atttgttcattatttttatcatccacgcttgtaagtttgttctttttcttctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttttg 4549539  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||| ||||||| ||||||||||||||||  |||||||    
T  4549538 aaattcttaaaagtcagtgtgataaatcctttaaaatc 4549501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 7947395 - 7947279
Alignment:
Q  51 atttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaaatccttaaa 150  Q
    |||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||  |||||||||||| |||| ||| ||    
T  7947395 atttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcatataaaatcctttgaaattctttaa 7947296  T
Q  151 attcagtgtgataaatc 167  Q
    | |||||||||||||||    
T  7947295 agtcagtgtgataaatc 7947279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 39853184 - 39853281
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  39853184 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 39853281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 4239843 - 4239739
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||||||| | |||||  ||||||||||||||||||  |||||||| |||||||||||||     
T  4239843 atttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaactcattgaatcctttgaaaatttaaaatcacataaaatcctttg 4239744  T
Q  140 aaatc 144  Q
    |||||    
T  4239743 aaatc 4239739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 37014699 - 37014785
Alignment:
Q  50 tatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  37014699 tatttttatcattcacgcttgtaagtttgttctttttcc-ctaaaattcattgaatcatttgaaattttaaaatcacataaaatcctt 37014785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 10553714 - 10553775
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  10553714 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 10553775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 13999323 - 13999262
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  13999323 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 13999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 40411395 - 40411456
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  40411395 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 40411456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 1151508 - 1151447
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  1151508 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 1151447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 1459404 - 1459343
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||    
T  1459404 aaagtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaaga 1459343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 4549474 - 4549413
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  4549474 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 4549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 11632794 - 11632733
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  11632794 aaagtattttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 11632733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 13926918 - 13926979
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||    
T  13926918 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtctttttaaatcttaaaga 13926979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 13949909 - 13949848
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  13949909 aaagtcttttataatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 13949848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 39853338 - 39853399
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||    
T  39853338 aaagtcttttaaaatctcacagaatcaatacaatctcacagagtcttttaaaatctaaaaga 39853399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 1151592 - 1151533
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  1151592 aaatcacataaaatcttttgaaatccttaaaagtcagtgtgataaatcccttaaaatctt 1151533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 10553541 - 10553486
Alignment:
Q  221 ttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  10553541 ttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 10553486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 40013010 - 40012951
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  40013010 aaatcacataaaatcctttgaaatccttaaaagtctgtatgataaatcctttaaaatctt 40012951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 1459558 - 1459464
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatc 134  Q
    ||||||| | ||||||||||||||||| ||||| |||| || ||| |   ||||| |||||||||||||||||||| |||||||| |||||||||    
T  1459558 atttgttcattatttctatcattcacgcttgtatgttttttttttctctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatc 1459464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 4239689 - 4239628
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||||||| |||| ||||  ||| |||||||||||||||||||||    
T  4239689 aaagtcttttaaaatctcacagaattaataaaatctcacacagtcttttaaaatcttaaaga 4239628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 7947238 - 7947181
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||||  |||  ||||||||||||||||||||    
T  7947238 tcttttaaaatctcacagaatcaatacaatctcacacggtcttttaaaatcttaaaga 7947181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 13717081 - 13717142
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||  ||| | |||||||||||||||||||    
T  13717081 aaagtcttttaaaatctcacaaaatcaatacaatctcacacaatcttttaaaatcttaaaga 13717142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 40012926 - 40012865
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||||||| |||||||||||||  |||  ||||||||||||||||||||    
T  40012926 aaagtcttttaaaatctcacaaaatcaatacaatctcacactgtcttttaaaatcttaaaga 40012865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 3603564 - 3603512
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctt 271  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  3603564 tcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatctt 3603512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 5950024 - 5950067
Alignment:
Q  167 cccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  5950024 cccataaaatcctttgaaatccttaaaagtcagtgtgataaatc 5950067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 13999477 - 13999380
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 137  Q
    ||||||| | ||||| ||||||||||| ||||||||||| ||||||| | ||||| |  | |||||| |||||||| |||||||| ||| ||||||||    
T  13999477 atttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatatactgaatcttttgaaattttaaaatcacatgaaatcctt 13999380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 17519499 - 17519548
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaat 268  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  17519499 tcttttaaaatctcacagaatcaataaaatcttacaaagtcttttaaaat 17519548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 5950104 - 5950163
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaa 274  Q
    |||||| ||||||||||||||||||||||||||||  ||| | | |||||||||||||||    
T  5950104 aaagtcatttaaaatctcacagaatcaatacaatctcacataatattttaaaatcttaaa 5950163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 13926834 - 13926893
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| ||||||||||||| |||| ||||||||||||| |||||||||| ||||| ||||    
T  13926834 aaatcacataaaatcctttaaaattcttaaaagtcagtgtgataaatcctttaaaatctt 13926893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 4549558 - 4549504
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 217  Q
    ||||| ||||||||| |||||||| ||||||||||||| |||||||||| |||||    
T  4549558 aaatcacataaaatcttttgaaattcttaaaagtcagtgtgataaatcctttaaa 4549504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 32827949 - 32827897
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaa 267  Q
    ||||||||| |||||| ||   |||||||||||||||||||||||||||||||    
T  32827949 aaagtctttcaaaatcccattaaatcaatacaatccaacaaagtcttttaaaa 32827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 18677033 - 18676978
Alignment:
Q  221 ttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||| |||| ||||| |||||| ||||||| |||||||||||||| ||||    
T  18677033 ttttaaaatcccacaaaatcactacaatacaacaaaatcttttaaaatcttcaaga 18676978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 2275378 - 2275316
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||| ||||   || |||||||||||||  |||||||||||||||||||| ||||    
T  2275378 taaagtcttttagaatccatcaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 2275316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 10572271 - 10572316
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtct 260  Q
    |||||||||||| ||||||||||||||||| ||||  |||||||||    
T  10572271 aaagtcttttaatatctcacagaatcaatagaatcttacaaagtct 10572316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 37014846 - 37014903
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||| ||||||| ||||||||   || ||| |||||||||||||||||    
T  37014846 tcttttaaaatctcccagaatcgatacaatctcccacagtattttaaaatcttaaaga 37014903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 7947319 - 7947279
Alignment:
Q  170 ataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  7947319 ataaaatcctttgaaattctttaaagtcagtgtgataaatc 7947279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 26629619 - 26629567
Alignment:
Q  216 aagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaat 268  Q
    |||||||||||||||||| ||| ||  |||||||| ||||| |||||||||||    
T  26629619 aagtcttttaaaatctcatagagtctttacaatcctacaaaatcttttaaaat 26629567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 72; Significance: 9e-33; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 36677 - 36550
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||||||||| ||||||||||||| ||||| | ||||| |||||||||| ||||||||| |||||||| |||||||||||||     
T  36677 atttgttcattatttttatcattcacgcttgtaagtttgttttttttcccctaaaattcattgaattctttgaaattttaaaatcacataaaatcctttg 36578  T
Q  140 aaatccttaaaattcagtgtgataaatc 167  Q
    |||| ||||||| |||||||||||||||    
T  36577 aaatgcttaaaagtcagtgtgataaatc 36550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 36509 - 36448
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||    
T  36509 aaagtcttttaaaatctcacagaatcaatataatctcacacagtcttttaaaatcttaaaga 36448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 36597 - 36550
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatc 210  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||    
T  36597 aaatcacataaaatcctttgaaatgcttaaaagtcagtgtgataaatc 36550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 3846 - 3709
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||| ||||| ||||| |||||||||||||||||||   ||||| |||||||||||||||||||| |||||||| |||||||||||||     
T  3846 atttgttcattatttttatcactcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttg 3747  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||| | || |||||||||||||  |||||||    
T  3746 aaatccttaatagtctgtgtgataaatcctttaaaatc 3709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 3682 - 3621
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||| |||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||    
T  3682 aaagttttttaaaatctcacagaatcaatacaatctcacacagtctcttaaaatcttaaaga 3621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 3766 - 3707
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||||||||||||||||||| |||| || |||||||||| ||||| ||||    
T  3766 aaatcacataaaatcctttgaaatccttaatagtctgtgtgataaatcctttaaaatctt 3707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1521 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 1565 - 1428
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||||||||||||||| |||||||| |||||||||| | ||||| |||||| ||| ||||||||| |||||||  |||||||||||||     
T  1565 atttgttcattatttctatcattcacgcttgtaagtatgttctttttcccctaaaattcatttaattctttgaaattttaaaataacataaaatcctttg 1466  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||  |||||| ||||||||||||||||  |||||||    
T  1465 aaatttttaaaagtcagtgtgataaatcctttaaaatc 1428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1521; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 1401 - 1344
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctta 272  Q
    |||||||||||||||||||||||||||||||||||  |||  |||||| |||||||||    
T  1401 aaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatctta 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1521; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 1479 - 1426
Alignment:
Q  169 cataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||||||  |||||||||||| |||||||||| ||||| ||||    
T  1479 cataaaatcctttgaaatttttaaaagtcagtgtgataaatcctttaaaatctt 1426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 16420 - 16283
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||||||||||||||| |||||||| |||||||||| | ||||| |||||| ||| ||||||||| |||||||  |||||||||||||     
T  16420 atttgttcattatttctatcattcacgcttgtaagtatgttctttttcccctaaaattcatttaattctttgaaattttaaaataacataaaatcctttg 16321  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||  |||||| ||||||||||||||||  |||||||    
T  16320 aaatttttaaaagtcagtgtgataaatcctttaaaatc 16283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 16256 - 16199
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctta 272  Q
    |||||||||||||||||||||||||||||||||||  |||  |||||| |||||||||    
T  16256 aaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatctta 16199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 16334 - 16281
Alignment:
Q  169 cataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||||||  |||||||||||| |||||||||| ||||| ||||    
T  16334 cataaaatcctttgaaatttttaaaagtcagtgtgataaatcctttaaaatctt 16281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 66; Significance: 4e-29; HSPs: 6)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 20647 - 20510
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||||||||||||||| |||||||| |||||||||| | ||||| |||||| ||| ||||||||| |||||||  |||||||||||||     
T  20647 atttgttcattatttctatcattcacgcttgtaagtatgttctttttcccctaaaattcatttaattctttgaaattttaaaataacataaaatcctttg 20548  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||  |||||| ||||||||||||||||  |||||||    
T  20547 aaatttttaaaagtcagtgtgataaatcctttaaaatc 20510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 29154 - 29291
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatccttta 139  Q
    ||||||| | ||||||||||||||||| |||||||| |||||||||| | ||||| |||||| ||| ||||||||| |||||||  |||||||||||||     
T  29154 atttgttcattatttctatcattcacgcttgtaagtatgttctttttcccctaaaattcatttaattctttgaaattttaaaataacataaaatcctttg 29253  T
Q  140 aaatccttaaaattcagtgtgataaatcccataaaatc 177  Q
    ||||  |||||| ||||||||||||||||  |||||||    
T  29254 aaatttttaaaagtcagtgtgataaatcctttaaaatc 29291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 20483 - 20426
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctta 272  Q
    |||||||||||||||||||||||||||||||||||  |||  |||||| |||||||||    
T  20483 aaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatctta 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 29318 - 29375
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatctta 272  Q
    |||||||||||||||||||||||||||||||||||  |||  |||||| |||||||||    
T  29318 aaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatctta 29375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 20561 - 20508
Alignment:
Q  169 cataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||||||  |||||||||||| |||||||||| ||||| ||||    
T  20561 cataaaatcctttgaaatttttaaaagtcagtgtgataaatcctttaaaatctt 20508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 29240 - 29293
Alignment:
Q  169 cataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||||||||||||||||  |||||||||||| |||||||||| ||||| ||||    
T  29240 cataaaatcctttgaaatttttaaaagtcagtgtgataaatcctttaaaatctt 29293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 3384 - 3249
Alignment:
Q  42 ttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttaaa 141  Q
    ||||||| ||||| | ||||||||| |||||| ||||||||||||   ||||| |||||||||||  ||||||| |||||||| |||||||| |||| ||    
T  3384 ttgtttattatttttgtcattcacgtttgtaaatttgttctttttctcctaaaattcattgaatcacttgaaattttaaaatcacataaaattctttgaa 3285  T
Q  142 atccttaaaattcagtgtgataaatcccataaaatc 177  Q
    |||||||||| ||||||||||||||||  |||||||    
T  3284 atccttaaaagtcagtgtgataaatcctttaaaatc 3249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 3306 - 3247
Alignment:
Q  163 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaagtctt 222  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||    
T  3306 aaatcacataaaattctttgaaatccttaaaagtcagtgtgataaatcctttaaaatctt 3247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 3222 - 3161
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||| ||||||||||||| ||| |||||||||  ||| |||||||||||||||||||||    
T  3222 aaagtctcttaaaatctcacataattaatacaatctcacacagtcttttaaaatcttaaaga 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 57; Significance: 8e-24; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 39015 - 38931
Alignment:
Q  40 atttgtttactatttctatcattcacggttgtaagtttgttcttttttcgctaaagttcattgaatcctttgaaatattaaaatc 124  Q
    ||||||| ||||||| ||||||||| | ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  39015 atttgttcactatttttatcattcatgcttgtaagtttgttcttttttccctaaaattcattgaatcctttgaaattttaaaatc 38931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 38857 - 38797
Alignment:
Q  219 tcttttaaaatctcacagaatcaatacaatc-ca----acaaagtcttttaaaatcttaaa 274  Q
    ||||||||||||||||||||||||||||||| ||    ||| |||||||||||||||||||    
T  38857 tcttttaaaatctcacagaatcaatacaatctcacatcacacagtcttttaaaatcttaaa 38797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 38937 - 38891
Alignment:
Q  171 taaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 217  Q
    ||||||| ||||||||| |||||||||||| |||||||||| |||||    
T  38937 taaaatcatttgaaatctttaaaagtcagtgtgataaatcctttaaa 38891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 20555 - 20494
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  20555 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 20494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 33933 - 33872
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  33933 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 33872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 80901 - 80840
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  80901 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 80840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 1047 - 985
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    ||||||||||||||||| |||| |||||||||||||  ||||| |||||||||||||| ||||    
T  1047 taaagtcttttaaaatcccacaaaatcaatacaatcacacaaaatcttttaaaatctttaaga 985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 21759 - 21820
Alignment:
Q  215 aaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||||| |||||||||||    || ||||||||||||| |||||||    
T  21759 aaagtcttttaaaatctcacaggatcaatacaatatcccagagtcttttaaaatgttaaaga 21820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 15734 - 15672
Alignment:
Q  214 taaagtcttttaaaatctcacagaatcaatacaatccaacaaagtcttttaaaatcttaaaga 276  Q
    |||||||||||||||||||| | |||||||||||||  |  | ||||||||||||||| ||||    
T  15734 taaagtcttttaaaatctcaaaaaatcaatacaatcacatgaggtcttttaaaatctttaaga 15672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University