View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12080_low_37 (Length: 272)
Name: NF12080_low_37
Description: NF12080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12080_low_37 |
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Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 6 - 258
Target Start/End: Original strand, 12480913 - 12481165
Alignment:
| Q |
6 |
agtagcatagggcattgcaaattttaaggcctgctagtgcaattctaatggatgacttattgtcacagaataacttcaaaggagcttcatattttatctt |
105 |
Q |
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| T |
12480913 |
agtaacatagggcattgcaaattttaaggcctgctagtgcaattctaatggatgacttattgtcacagaataacttcaaaggagcttcatattttatctt |
12481012 |
T |
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| Q |
106 |
gaggtcatctggtatgtatgacttgaaattctacttgtcaccttagaagattgagaacatatttcctttgagagataaatatactttcctttgaagagag |
205 |
Q |
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| T |
12481013 |
gaggtcatctggtatgtatgacttgaaattctacttgtcaccttagaagattgagaacatatttcctttgagagataaatatactttcctttgaagagag |
12481112 |
T |
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| Q |
206 |
caaggacccgtcttcgtcaatttgtgaggtctactgcgtaaagtagtgatgtc |
258 |
Q |
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| T |
12481113 |
caaggacctgtcttcatcaatttgtgaggtctactgcgtaaagtagtgatgtc |
12481165 |
T |
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