View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12082_low_4 (Length: 573)

Name: NF12082_low_4
Description: NF12082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12082_low_4
NF12082_low_4
[»] chr7 (42 HSPs)
chr7 (1-554)||(12419409-12419962)
chr7 (75-550)||(27237342-27237820)
chr7 (72-470)||(7398156-7398555)
chr7 (191-550)||(23858901-23859257)
chr7 (191-549)||(23020404-23020757)
chr7 (191-340)||(26917810-26917957)
chr7 (355-547)||(12981315-12981505)
chr7 (352-552)||(2611177-2611378)
chr7 (310-469)||(9021799-9021957)
chr7 (191-455)||(20153030-20153290)
chr7 (385-550)||(23744815-23744980)
chr7 (385-552)||(21763505-21763670)
chr7 (355-469)||(6765680-6765794)
chr7 (352-470)||(36891564-36891682)
chr7 (284-340)||(17800349-17800403)
chr7 (102-174)||(38971140-38971212)
chr7 (367-470)||(8171537-8171640)
chr7 (367-470)||(38414874-38414977)
chr7 (424-514)||(9014133-9014222)
chr7 (390-470)||(26254017-26254097)
chr7 (367-471)||(20091278-20091382)
chr7 (367-470)||(19692095-19692198)
chr7 (385-553)||(38971272-38971439)
chr7 (370-468)||(36902924-36903022)
chr7 (75-183)||(36903588-36903695)
chr7 (367-459)||(12596296-12596388)
chr7 (293-340)||(23551175-23551220)
chr7 (293-340)||(25010386-25010431)
chr7 (293-340)||(38414980-38415025)
chr7 (367-471)||(48983841-48983945)
chr7 (427-470)||(18776764-18776807)
chr7 (427-470)||(29077281-29077324)
chr7 (293-338)||(19692047-19692090)
chr7 (367-465)||(24525688-24525786)
chr7 (390-459)||(8239711-8239780)
chr7 (75-175)||(9021962-9022063)
chr7 (307-340)||(24525789-24525822)
chr7 (293-336)||(8239638-8239679)
chr7 (367-459)||(10955485-10955577)
chr7 (293-340)||(20091385-20091430)
chr7 (367-447)||(23551092-23551172)
chr7 (293-340)||(47985074-47985119)
[»] chr5 (51 HSPs)
chr5 (75-550)||(11242235-11242714)
chr5 (92-470)||(2024638-2025019)
chr5 (74-470)||(34425609-34426007)
chr5 (160-469)||(2411882-2412191)
chr5 (253-469)||(14318382-14318595)
chr5 (354-549)||(2530815-2531009)
chr5 (78-469)||(10543392-10543776)
chr5 (191-535)||(40794257-40794598)
chr5 (75-279)||(15639160-15639369)
chr5 (370-550)||(26718865-26719045)
chr5 (370-550)||(26988609-26988789)
chr5 (352-470)||(36868872-36868990)
chr5 (357-468)||(22648734-22648845)
chr5 (308-470)||(33037721-33037884)
chr5 (284-550)||(10407378-10407645)
chr5 (191-278)||(34307320-34307407)
chr5 (288-447)||(15639570-15639724)
chr5 (352-516)||(1366476-1366640)
chr5 (216-546)||(24395590-24395918)
chr5 (191-306)||(26719054-26719169)
chr5 (191-306)||(26988798-26988913)
chr5 (367-470)||(27079012-27079115)
chr5 (430-552)||(35080686-35080806)
chr5 (427-470)||(606215-606258)
chr5 (367-470)||(30854330-30854433)
chr5 (367-470)||(34756362-34756465)
chr5 (367-459)||(9364292-9364384)
chr5 (367-459)||(16198801-16198893)
chr5 (427-471)||(27530544-27530588)
chr5 (367-470)||(28822338-28822441)
chr5 (367-553)||(38869276-38869462)
chr5 (293-340)||(7670877-7670922)
chr5 (293-340)||(16198896-16198941)
chr5 (367-459)||(19523200-19523292)
chr5 (368-456)||(27924084-27924172)
chr5 (293-340)||(28822444-28822489)
chr5 (390-470)||(31881430-31881510)
chr5 (293-340)||(38869465-38869510)
chr5 (427-458)||(22875003-22875034)
chr5 (367-470)||(23284058-23284161)
chr5 (427-470)||(31194608-31194651)
chr5 (427-469)||(7338060-7338102)
chr5 (365-459)||(36187886-36187980)
chr5 (385-459)||(40389543-40389617)
chr5 (486-551)||(27530614-27530679)
chr5 (427-459)||(2274951-2274983)
chr5 (284-339)||(7079552-7079605)
chr5 (427-459)||(15480096-15480128)
chr5 (367-459)||(16799334-16799426)
chr5 (72-140)||(34307416-34307484)
chr5 (293-340)||(40389638-40389683)
[»] chr1 (43 HSPs)
chr1 (75-550)||(39134638-39135125)
chr1 (191-514)||(10925908-10926219)
chr1 (295-550)||(38546954-38547207)
chr1 (163-469)||(26803758-26804059)
chr1 (352-547)||(45758491-45758688)
chr1 (285-519)||(43235717-43235951)
chr1 (284-550)||(5533242-5533507)
chr1 (355-469)||(6221678-6221791)
chr1 (359-470)||(38853527-38853637)
chr1 (367-465)||(9173026-9173124)
chr1 (367-465)||(9181008-9181106)
chr1 (367-459)||(14146312-14146404)
chr1 (367-470)||(5316692-5316795)
chr1 (367-470)||(23185439-23185542)
chr1 (367-469)||(4971617-4971719)
chr1 (367-468)||(1366878-1366979)
chr1 (365-470)||(50881440-50881545)
chr1 (390-470)||(6889646-6889726)
chr1 (390-470)||(6891492-6891572)
chr1 (423-470)||(17322621-17322668)
chr1 (365-459)||(6771801-6771895)
chr1 (367-457)||(19955729-19955819)
chr1 (385-470)||(5027579-5027664)
chr1 (385-470)||(21740935-21741020)
chr1 (293-340)||(9181109-9181154)
chr1 (430-551)||(17169031-17169152)
chr1 (293-340)||(19955681-19955726)
chr1 (367-459)||(27559649-27559741)
chr1 (367-459)||(41697146-41697238)
chr1 (293-340)||(44895616-44895661)
chr1 (366-470)||(50146307-50146411)
chr1 (427-470)||(22865459-22865502)
chr1 (427-470)||(44655813-44655856)
chr1 (102-187)||(50146068-50146154)
chr1 (385-470)||(35392300-35392384)
chr1 (293-340)||(1366982-1367027)
chr1 (427-459)||(3406490-3406522)
chr1 (427-459)||(3440298-3440330)
chr1 (293-340)||(4971722-4971767)
chr1 (293-340)||(9173127-9173172)
chr1 (293-340)||(13913586-13913631)
chr1 (427-459)||(16140127-16140159)
chr1 (293-340)||(23185391-23185436)
[»] chr2 (42 HSPs)
chr2 (72-552)||(21665618-21666099)
chr2 (75-419)||(11952656-11953009)
chr2 (196-518)||(24035496-24035816)
chr2 (214-516)||(13800497-13800797)
chr2 (159-469)||(16227368-16227683)
chr2 (158-544)||(38400587-38400975)
chr2 (76-471)||(12134038-12134426)
chr2 (75-340)||(29694087-29694357)
chr2 (267-469)||(11912757-11912958)
chr2 (253-409)||(37182558-37182712)
chr2 (357-544)||(16096998-16097185)
chr2 (352-543)||(7742055-7742251)
chr2 (423-551)||(22727375-22727503)
chr2 (368-552)||(27506657-27506841)
chr2 (284-380)||(10252326-10252421)
chr2 (479-544)||(37182756-37182821)
chr2 (367-470)||(6965007-6965110)
chr2 (367-470)||(12337447-12337550)
chr2 (367-469)||(10762565-10762667)
chr2 (367-465)||(24410437-24410535)
chr2 (405-535)||(34694013-34694143)
chr2 (405-535)||(34716425-34716555)
chr2 (367-470)||(9046029-9046133)
chr2 (84-144)||(24035863-24035923)
chr2 (367-470)||(3155217-3155320)
chr2 (367-470)||(4505894-4505997)
chr2 (367-470)||(29939861-29939964)
chr2 (158-245)||(37622543-37622639)
chr2 (430-469)||(42029208-42029247)
chr2 (352-470)||(28425709-28425827)
chr2 (433-547)||(11952511-11952624)
chr2 (486-535)||(12694798-12694847)
chr2 (293-340)||(8327618-8327663)
chr2 (367-470)||(26716128-26716232)
chr2 (427-515)||(10252476-10252564)
chr2 (427-470)||(40636198-40636241)
chr2 (427-459)||(3953066-3953098)
chr2 (427-459)||(7162844-7162876)
chr2 (427-459)||(8907089-8907121)
chr2 (293-340)||(10762670-10762715)
chr2 (486-546)||(12133959-12134019)
chr2 (293-340)||(27506845-27506890)
[»] chr8 (46 HSPs)
chr8 (194-544)||(15167338-15167686)
chr8 (158-544)||(15078548-15078936)
chr8 (77-469)||(34048705-34049103)
chr8 (253-549)||(41677092-41677387)
chr8 (285-549)||(7944442-7944704)
chr8 (166-516)||(8646001-8646355)
chr8 (284-470)||(11290104-11290288)
chr8 (354-552)||(39332325-39332520)
chr8 (367-470)||(41879182-41879285)
chr8 (357-516)||(5973060-5973219)
chr8 (267-340)||(25561635-25561706)
chr8 (387-542)||(30674330-30674485)
chr8 (352-465)||(23941095-23941208)
chr8 (352-447)||(5942682-5942777)
chr8 (219-338)||(38009267-38009384)
chr8 (367-471)||(2952219-2952323)
chr8 (352-459)||(5721545-5721652)
chr8 (367-470)||(30883330-30883433)
chr8 (307-514)||(34789817-34790024)
chr8 (430-550)||(38009070-38009191)
chr8 (78-141)||(7944763-7944826)
chr8 (360-455)||(8102906-8103001)
chr8 (367-470)||(45475818-45475921)
chr8 (427-469)||(9108554-9108596)
chr8 (75-141)||(25562010-25562076)
chr8 (367-457)||(42600783-42600873)
chr8 (367-552)||(23606546-23606731)
chr8 (367-470)||(13534686-13534788)
chr8 (367-470)||(13624226-13624328)
chr8 (295-340)||(8102845-8102888)
chr8 (367-510)||(10917392-10917535)
chr8 (367-469)||(23798261-23798363)
chr8 (427-469)||(34868177-34868219)
chr8 (385-469)||(5860744-5860828)
chr8 (284-339)||(5973235-5973288)
chr8 (293-340)||(23606734-23606779)
chr8 (293-340)||(23798366-23798411)
chr8 (285-339)||(30674507-30674559)
chr8 (70-132)||(5973367-5973429)
chr8 (75-141)||(38009479-38009545)
chr8 (367-456)||(3048530-3048619)
chr8 (75-119)||(8645917-8645961)
chr8 (293-340)||(10917344-10917389)
chr8 (427-459)||(37430168-37430200)
chr8 (293-340)||(42600735-42600780)
chr8 (293-340)||(45475770-45475815)
[»] chr4 (59 HSPs)
chr4 (191-551)||(36118376-36118732)
chr4 (191-535)||(52468118-52468459)
chr4 (78-546)||(27111747-27112214)
chr4 (158-550)||(40217020-40217419)
chr4 (80-459)||(15734807-15735188)
chr4 (163-340)||(37746849-37747028)
chr4 (275-516)||(39329344-39329583)
chr4 (206-458)||(2135331-2135578)
chr4 (191-470)||(24396769-24397043)
chr4 (186-467)||(36178498-36178778)
chr4 (260-470)||(36362869-36363076)
chr4 (355-546)||(10041921-10042113)
chr4 (427-550)||(24614019-24614143)
chr4 (307-550)||(51691838-51692078)
chr4 (367-470)||(2790739-2790842)
chr4 (388-549)||(39655172-39655334)
chr4 (352-465)||(45656166-45656279)
chr4 (357-448)||(4167911-4168002)
chr4 (357-459)||(37744918-37745021)
chr4 (367-470)||(54780783-54780886)
chr4 (428-550)||(30507037-30507162)
chr4 (70-242)||(4168097-4168268)
chr4 (479-547)||(4167843-4167911)
chr4 (367-470)||(43455529-43455632)
chr4 (367-470)||(47128993-47129096)
chr4 (486-548)||(11906822-11906884)
chr4 (367-550)||(34027585-34027768)
chr4 (367-469)||(38209590-38209692)
chr4 (284-340)||(30507200-30507254)
chr4 (367-470)||(19498510-19498611)
chr4 (367-459)||(37777232-37777324)
chr4 (367-471)||(54083239-54083343)
chr4 (486-550)||(5893137-5893201)
chr4 (399-455)||(11906904-11906960)
chr4 (293-340)||(16882499-16882544)
chr4 (293-340)||(19498462-19498507)
chr4 (293-340)||(32128542-32128587)
chr4 (367-459)||(32915391-32915483)
chr4 (293-340)||(34027537-34027582)
chr4 (293-340)||(40089474-40089519)
chr4 (427-470)||(9578662-9578705)
chr4 (427-470)||(10978966-10979009)
chr4 (367-470)||(34768572-34768675)
chr4 (367-446)||(40089522-40089601)
chr4 (427-470)||(48209306-48209349)
chr4 (293-339)||(54083347-54083391)
chr4 (191-245)||(39329625-39329679)
chr4 (365-458)||(5128852-5128945)
chr4 (284-340)||(22077110-22077164)
chr4 (385-470)||(32128608-32128693)
chr4 (427-459)||(1105598-1105630)
chr4 (427-459)||(10428206-10428238)
chr4 (427-459)||(13460273-13460305)
chr4 (293-340)||(16844979-16845024)
chr4 (430-470)||(16922327-16922367)
chr4 (293-340)||(24969395-24969440)
chr4 (427-459)||(37514725-37514757)
chr4 (293-340)||(38352359-38352404)
chr4 (191-244)||(50677231-50677288)
[»] scaffold1320 (1 HSPs)
scaffold1320 (158-544)||(1144-1532)
[»] chr3 (44 HSPs)
chr3 (82-544)||(26279254-26279722)
chr3 (253-513)||(28689317-28689574)
chr3 (284-551)||(49393014-49393276)
chr3 (197-519)||(52374500-52374813)
chr3 (206-337)||(42453257-42453386)
chr3 (284-470)||(8420249-8420433)
chr3 (284-470)||(54574826-54575010)
chr3 (352-516)||(25855411-25855574)
chr3 (284-469)||(789860-790042)
chr3 (424-546)||(23641240-23641363)
chr3 (284-436)||(29598031-29598179)
chr3 (367-459)||(47467688-47467780)
chr3 (367-470)||(21582775-21582878)
chr3 (367-470)||(53506883-53506986)
chr3 (367-470)||(54619202-54619305)
chr3 (390-549)||(3953816-3953975)
chr3 (368-470)||(37168372-37168474)
chr3 (385-471)||(54407156-54407242)
chr3 (369-470)||(38681092-38681193)
chr3 (361-469)||(32319155-32319263)
chr3 (367-470)||(34290635-34290738)
chr3 (427-470)||(42453468-42453511)
chr3 (367-470)||(43207237-43207339)
chr3 (284-340)||(36179629-36179683)
chr3 (367-459)||(8073348-8073440)
chr3 (293-340)||(43207342-43207387)
chr3 (367-459)||(44708481-44708573)
chr3 (367-459)||(53149324-53149416)
chr3 (293-340)||(53506989-53507034)
chr3 (293-340)||(54407262-54407307)
chr3 (367-458)||(9878698-9878789)
chr3 (427-470)||(18372547-18372590)
chr3 (427-470)||(36716024-36716067)
chr3 (367-457)||(50939245-50939335)
chr3 (352-402)||(52973385-52973435)
chr3 (76-141)||(23641460-23641525)
chr3 (486-551)||(36179475-36179540)
chr3 (427-459)||(27078579-27078611)
chr3 (427-459)||(27084376-27084408)
chr3 (490-558)||(29598175-29598243)
chr3 (293-340)||(34290741-34290786)
chr3 (293-340)||(37168323-37168368)
chr3 (427-459)||(42098865-42098897)
chr3 (293-340)||(44708433-44708478)
[»] chr6 (24 HSPs)
chr6 (78-546)||(2477508-2477976)
chr6 (191-552)||(20611620-20611977)
chr6 (356-458)||(21183686-21183788)
chr6 (355-466)||(6159430-6159541)
chr6 (385-469)||(30121784-30121868)
chr6 (367-459)||(28075787-28075879)
chr6 (367-470)||(13727398-13727501)
chr6 (367-470)||(20711719-20711822)
chr6 (367-470)||(21479498-21479601)
chr6 (367-459)||(24711009-24711101)
chr6 (367-552)||(27788606-27788790)
chr6 (367-459)||(33774121-33774213)
chr6 (310-446)||(4036895-4037031)
chr6 (371-469)||(1155849-1155947)
chr6 (368-470)||(21280550-21280652)
chr6 (365-470)||(34397859-34397964)
chr6 (78-149)||(20611510-20611582)
chr6 (285-336)||(30121698-30121747)
chr6 (367-459)||(30832534-30832626)
chr6 (367-470)||(19737691-19737794)
chr6 (69-181)||(4036783-4036896)
chr6 (307-340)||(17353922-17353955)
chr6 (367-459)||(17353958-17354050)
chr6 (293-340)||(19987117-19987162)
[»] scaffold0007 (2 HSPs)
scaffold0007 (161-552)||(230778-231167)
scaffold0007 (74-141)||(232544-232611)
[»] scaffold0018 (1 HSPs)
scaffold0018 (206-464)||(173515-173771)
[»] scaffold0022 (2 HSPs)
scaffold0022 (284-550)||(40003-40272)
scaffold0022 (284-550)||(138063-138332)
[»] scaffold1590 (2 HSPs)
scaffold1590 (352-534)||(193-375)
scaffold1590 (72-141)||(432-501)
[»] scaffold0097 (2 HSPs)
scaffold0097 (76-184)||(38798-38907)
scaffold0097 (355-465)||(38914-39024)
[»] scaffold0012 (1 HSPs)
scaffold0012 (361-469)||(206489-206597)
[»] scaffold0182 (1 HSPs)
scaffold0182 (352-469)||(23993-24110)
[»] scaffold0039 (2 HSPs)
scaffold0039 (367-470)||(106539-106642)
scaffold0039 (293-340)||(106491-106536)
[»] scaffold0227 (3 HSPs)
scaffold0227 (355-408)||(16016-16069)
scaffold0227 (427-459)||(16126-16158)
scaffold0227 (284-340)||(15948-16003)
[»] scaffold0070 (1 HSPs)
scaffold0070 (367-459)||(1344-1436)
[»] scaffold0003 (2 HSPs)
scaffold0003 (358-408)||(350269-350319)
scaffold0003 (358-443)||(351360-351445)
[»] scaffold0001 (1 HSPs)
scaffold0001 (408-459)||(183102-183153)


Alignment Details
Target: chr7 (Bit Score: 463; Significance: 0; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 1 - 554
Target Start/End: Complemental strand, 12419962 - 12419409
Alignment:
Q  1 ggggaggagagagaaagaaattctaaaaatttagagaactctttgctctgatttgtgagttatatgtagagcaaggccggaccttggggtctgcaaggag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12419962 ggggaggagagagaaagaaattctaaaaatttagagaactctttgctctgatttgtgagttatatgtagagcagggccggaccttggggtctgcaaggag 12419863  T
Q  101 ttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactaccctactaaaaacaaaatttctttttct 200  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12419862 ttcaatggaaccgggcctcaccaaggtatgggcctaaaaaaaaatataggccggtaatactactaagtactaccctactaaaaacaaaatttctttttct 12419763  T
Q  201 ctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12419762 ctctgataccatgcgttccatcaccatcactccatcggactttcctttttttcttctccgatttgatttccttttcctcgtcagttgtcttgttttaggc 12419663  T
Q  301 ctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12419662 ctattatagaattgggtcctcttgcttttggtgttaggtgtgtatttttttgggagggtggtttgaggttcctcatgtattcaatagtgattttcatctt 12419563  T
Q  401 tggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacggg 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||||||||||    
T  12419562 tggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacattgttcttttaaaaaaaatacgttgttattttattacggg 12419463  T
Q  501 cctcttttcacttacaaagcagaacctccggattcataggaacggccctgatgt 554  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  12419462 cctcttttcacttacaaagccgagcctccggattcataggaacggccctgatgt 12419409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 75 - 550
Target Start/End: Complemental strand, 27237820 - 27237342
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa-tataggccggtaatactactaagtactac 173  Q
    |||||||| ||||||| ||||| ||| ||||||||  |||||||| |  ||||||||| |||||||| || ||||   |  ||  |||| ||||||||||    
T  27237820 ggccggactttggggtgtgcaaagagctcaatggagttgggcctccctgaggtatgggtctaaaaaaaaactataactcaatagcactaataagtactac 27237721  T
Q  174 cctactaaaaacaaaat-----ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatt 268  Q
    || |||||||| ||| |     |||| | |||||||||||||| |||||||||||||||||||||||||||||||||       |||| |||||||||||    
T  27237720 cccactaaaaaaaaattaatttttctctatctctctgataccacgcgttccatcaccatcactccatcggactttccttttcttcttccccgatttgatt 27237621  T
Q  269 tccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgagg 368  Q
    ||||||| ||| |  |||||||||||||||||||||  |||||||||||| |||||||| |||||||||||| ||        |||||||||||||||||    
T  27237620 tcctttttctcttttgttgtcttgttttaggcctat--tagaattgggtcatcttgcttatggtgttaggtgagtgtttttttgggagggtggtttgagg 27237523  T
Q  369 ttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctt 468  Q
    |||||||||||| | ||||||||||||| |||| |||  |||||| |||||    || ||||||||||||||||||||||||||||||||| ||||||||    
T  27237522 ttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 27237423  T
Q  469 tttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    ||        ||| |||||||||||||||||  ||||||||||||| | ||  || |||||  ||||| |||||||||||||    
T  27237422 ttaaaaaaaatac-ttgttattttattacggatctcttttcacttatagagacgagcctccaaattcacaggaacggccctg 27237342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 72 - 470
Target Start/End: Original strand, 7398156 - 7398555
Alignment:
Q  72 caaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtac 170  Q
    ||||| ||||||||||||| ||||| ||| |||||||| ||| ||||| |||||||||||||||||| || | | |||| || ||| |||||||||||||    
T  7398156 caaggtcggaccttggggtgtgcaacgagctcaatggagctgagcctccccaaggtatgggcctaaataaaatttatagcccagtagtactactaagtac 7398255  T
Q  171 taccctactaaaaacaaaatttctttt---tctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgat 267  Q
    |||||  ||||||| ||   || ||||   ||||||| |||||| ||||||||||| ||||||||||||||||| |||       | || ||||||||||    
T  7398256 tacccc-ctaaaaaaaattcttattttctttctctctaataccacgcgttccatcaacatcactccatcggactctccttttcttcatccccgatttgat 7398354  T
Q  268 ttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgag 367  Q
    |||||||| ||| |  |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||  |        ||||||||||||||||    
T  7398355 ttccttttgctcttttgttgtcttgttttaggcctatta--gaattgggtcctcttgcttttggtgttacgtggatgtttttttgggagggtggtttgag 7398452  T
Q  368 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 467  Q
    |||||||||||||    |||||||||||| |||| | ||||||||| ||||| || || |||||||||||||| |||||||||||||||||| |||||||    
T  7398453 gttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattgttct 7398552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 191 - 550
Target Start/End: Original strand, 23858901 - 23859257
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||| ||||| ||       |||| || |||||||||| |||||||| || ||| |||    
T  23858901 ttctctttctctctgataccacgcgttccatcaccatcactgcatcagactt-ccttttcttcttccccaatttgatttcattttcctcttccgttatct 23858999  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||| ||        ||||||||||||||||| ||||||||||| |  |||| |    
T  23859000 tgttttaggcctatta--gaattgggtcctcttgcatttggtgttaggtgggtgtttttttgggagggtggtttgaggatcctcatgtatacggtagtaa 23859097  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttatt 490  Q
    ||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||        |||||| |||||    
T  23859098 ttttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacattattctcttaaacaaaatacgtttttatt 23859197  T
Q  491 ttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    ||||||| || ||||||||||||||| ||  || |||||  |||| ||||||||| ||||    
T  23859198 ttattacaggtctcttttcacttacagagtcgagcctccaaattcgtaggaacggacctg 23859257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 191 - 549
Target Start/End: Complemental strand, 23020757 - 23020404
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||       |||| ||||||||||||| |||||||| |  |||||||    
T  23020757 ttctctttctctctgataccacgcgttccatcaccatcattccatcggactttccttttcttcttccccgatttgatttctttttcctcttttgttgtct 23020658  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    |||||||| |||||  |||||||||||| | || |||||||||||||||  ||        | |||| || ||||| ||||||||||||| |  ||||||    
T  23020657 tgttttagacctat--tagaattgggtcatattacttttggtgttaggtaggt-gttttttgagaggatgatttgaagttcctcatgtatacggtagtga 23020561  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttatt 490  Q
    |||||| |||||  ||| |  || |||||    || || ||||||||||||||||||| |||||  ||||||||||||||        ||| || |||||    
T  23020560 ttttcacctttgagtgtgt-gcatatatacaacaccttatatttatcttttaaaaaatctaaatgaaacgttgttcttttaaaaaaaatacatttttatt 23020462  T
Q  491 ttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccct 549  Q
    ||||||||| |||||||||||||||| | | |  ||||| ||||| |||||||||||||    
T  23020461 ttattacggacctcttttcacttacagaaccg-gcctccagattcgtaggaacggccct 23020404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 191 - 340
Target Start/End: Complemental strand, 26917957 - 26917810
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| ||||| |||||||||||| ||| |||||||||||||||||| |||||| |       |||| ||||||||||||| |||||||| || |||||||    
T  26917957 ttctctttctatctgataccatgtgtttcatcaccatcactccatcagactttacttttcatcttccccgatttgatttcattttcctcttctgttgtct 26917858  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    |||||||||| |||  |||||||||||| |||||||||||||||||||||    
T  26917857 tgttttaggcttat--tagaattgggtcttcttgcttttggtgttaggtg 26917810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 355 - 547
Target Start/End: Original strand, 12981315 - 12981505
Alignment:
Q  355 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 454  Q
    |||||||||||||||||||||| ||| || |||||||||||| |||||  |||| | |  ||||| || || ||||||||||||||||||||| ||||||    
T  12981315 agggtggtttgaggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaat 12981414  T
Q  455 agaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggcc 547  Q
    ||||| || |||||||         || || ||||||||||||| |||||||||||| |||| | | |||||||||||||| |||||||||||    
T  12981415 agaacattcttctttt--ataaaaaacatttttattttattacgagcctcttttcacctacagaaccgaacctccggattcgtaggaacggcc 12981505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 352 - 552
Target Start/End: Complemental strand, 2611378 - 2611177
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||| | |||||||||||||||||||| || | |||||||||| | |||  |||| | || ||||| |  || |||||||||||||||||||||||||    
T  2611378 gggaggatcgtttgaggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaattta 2611279  T
Q  452 aatagaacgttgttctttt-tnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    |||||||| ||||||||||         ||| || ||||||||||||  |||||||||||||| || | | || |||||||||||||||||||| |||||    
T  2611278 aatagaacattgttcttttaaaaaaaaatacttttttattttattacaagcctcttttcacttgcagaaccgagcctccggattcataggaacgaccctg 2611179  T
Q  551 at 552  Q
    ||    
T  2611178 at 2611177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 310 - 469
Target Start/End: Complemental strand, 9021957 - 9021799
Alignment:
Q  310 aattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtat 409  Q
    ||||| || ||||||||||||||||||||||  |        |||||||||||||||||| |||||||||| |  |||||||||||| |||||| ||||     
T  9021957 aattgagttctcttgcttttggtgttaggtggatgtttttttgggagggtggtttgaggt-cctcatgtatacggtagtgattttcacctttgggtgtac 9021859  T
Q  410 cacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    | || ||||| || ||||||||||||||||||||||||||||||||| |  |||||||||    
T  9021858 cgcatatatacggcacattgtatttatcttttaaaaaatttaaatagcaaattgttcttt 9021799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 191 - 455
Target Start/End: Original strand, 20153030 - 20153290
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| ||||||||||||||||  |||||||||||||||||||||| |||||||         |||| ||||||||||||| |||| ||| |  |||||||    
T  20153030 ttctctttctctctgataccacacgttccatcaccatcactccattggactttgtttttcttcttccccgatttgatttcttttttctcatatgttgtct 20153129  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    ||||||||||||||||  |||||  ||||  ||||||||| |||||||||  |           ||||||||||||| | |||||||||| |   |||||    
T  20153130 tgttttaggcctatta--gaattaagtcccattgcttttgatgttaggtggatgttttttta--agggtggtttgagatccctcatgtatacggcagtga 20153225  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 455  Q
    ||||||||||||| | |||| || |||||    || |||||||||||||||||||||||||||||    
T  20153226 ttttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaata 20153290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 385 - 550
Target Start/End: Original strand, 23744815 - 23744980
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgtt 484  Q
    |||||||||| |||||| | |||| | || ||||  || || |||||||||||||||||||||||||| |||||| |||||||||||       ||| ||    
T  23744815 tagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattgttctttttaaaaaaatacatt 23744914  T
Q  485 gttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
     ||||||| ||||||||||||||||||||| | ||| || |||||  |||| ||||||||||||||    
T  23744915 tttatttttttacgggcctcttttcacttatagagctgagcctccaaattcgtaggaacggccctg 23744980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 385 - 552
Target Start/End: Complemental strand, 21763670 - 21763505
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgtt 484  Q
    ||||||||||||  ||| | |||||| || ||||| | ||| |||||||||||||||||||||||||||||||||  |||||  |||       ||||||    
T  21763670 tagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaacaatgttc--tttaaaaaaatacgtt 21763573  T
Q  485 gttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgat 552  Q
     ||||||||||||||  ||||||| ||||| | | |||| ||||| ||||  ||||||||||||||||    
T  21763572 tttattttattacggatctctttttacttatagaacagagcctccagatttgtaggaacggccctgat 21763505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 469
Target Start/End: Complemental strand, 6765794 - 6765680
Alignment:
Q  355 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 454  Q
    |||||||||||||||| ||| | ||| |  |||||||||||| |||||||||||   |  ||||| |  || ||||||||||||||||||||||||||||    
T  6765794 agggtggtttgaggttactcttatatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaat 6765695  T
Q  455 agaacgttgttcttt 469  Q
    ||||| |||||||||    
T  6765694 agaacattgttcttt 6765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 470
Target Start/End: Original strand, 36891564 - 36891682
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||| |||||||||||||||||||||| |  |||||||||||| ||||||||||| |  | |||||    |||||||||| ||| |||||||||| ||    
T  36891564 gggaggatggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatata 36891663  T
Q  452 aatagaacgttgttctttt 470  Q
    |||||||| || |||||||    
T  36891664 aatagaacattattctttt 36891682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 17800403 - 17800349
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  17800403 gttgtcttgttttaggcctatta--gaattgggtcctcttgcttttggtgttaggtg 17800349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 38971140 - 38971212
Alignment:
Q  102 tcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactacc 174  Q
    |||||||||||||| ||| |||| |||| ||||||||||| ||||||| || |||||||||||||||||||||    
T  38971140 tcaatggaactgggtctccccaaagtattggcctaaaaaaaaatatagcccagtaatactactaagtactacc 38971212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 8171640 - 8171537
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| |||||||||| ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  8171640 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 8171541  T
Q  467 tttt 470  Q
    ||||    
T  8171540 tttt 8171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 38414977 - 38414874
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| || |||| ||||||| |||||| |||| |||| ||||| |  || || |||||||||||||||||||  ||||||||||||| ||    
T  38414977 ggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatacaaatagaacgttgctc 38414878  T
Q  467 tttt 470  Q
    ||||    
T  38414877 tttt 38414874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 514
Target Start/End: Complemental strand, 9014222 - 9014133
Alignment:
Q  424 acattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcactta 514  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||        |||| | |||||||||||||||||||||||||||||    
T  9014222 acattgtatttatcttttaaaaaatttaaataaaacattgttc-tttaaaaaaaatacggttttattttattacgggcctcttttcactta 9014133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 470
Target Start/End: Original strand, 26254017 - 26254097
Alignment:
Q  390 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||||||    
T  26254017 attttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 26254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 20091382 - 20091278
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||| | |||||     
T  20091382 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 20091283  T
Q  467 ttttt 471  Q
    |||||    
T  20091282 ttttt 20091278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 19692095 - 19692198
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| | | ||| ||||||| |||| | |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  19692095 ggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatataaatagaacattgctc 19692194  T
Q  467 tttt 470  Q
    ||||    
T  19692195 tttt 19692198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 553
Target Start/End: Original strand, 38971272 - 38971439
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgtt 484  Q
    ||||||||||||  ||| | ||||| ||| ||||| |  || |||||||||||||||||||| |||||||| ||  ||| ||||||        ||| ||    
T  38971272 tagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatcttttaaaaa-tttaaataaaatattgatcttttaaaaaaaatacatt 38971370  T
Q  485 gttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgatg 553  Q
     ||||||||||||||| ||||||||||||||||||| ||  |||  ||||| ||| ||||||| |||||    
T  38971371 tttattttattacgggtctcttttcacttacaaagccgagtctctagattcgtagaaacggccatgatg 38971439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 468
Target Start/End: Complemental strand, 36903022 - 36902924
Alignment:
Q  370 tcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctt 468  Q
    ||||||||||| || || ||||||||| |||| | ||||  ||| ||||| |  |  |||||||||||| |||||||||||||||||||| ||||||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattgttctt 36902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 36903695 - 36903588
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactac 173  Q
    ||||||| ||||||||  |||| ||| ||||| || ||||||||| |||||||||  | |||||||  ||| |||| || ||| ||||||||||||||||    
T  36903695 ggccggatcttggggt--gcaaagagctcaattgagctgggcctctccaaggtataagtctaaaaataaattatagtccagtagtactactaagtactac 36903598  T
Q  174 cctactaaaa 183  Q
    ||||||||||    
T  36903597 cctactaaaa 36903588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 12596388 - 12596296
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    ||||||||||| || |  |||| ||||||| || ||| |||| |||| ||||| || || |||||||||||||| ||||||| ||||||||||    
T  12596388 ggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatataaatagaac 12596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 23551220 - 23551175
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  23551220 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 23551175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 25010386 - 25010431
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  25010386 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 25010431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 38415025 - 38414980
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  38415025 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 38414980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 48983945 - 48983841
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||| | |||||     
T  48983945 ggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagatcattgttt 48983846  T
Q  467 ttttt 471  Q
    |||||    
T  48983845 ttttt 48983841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 18776807 - 18776764
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  18776807 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 18776764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 29077281 - 29077324
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  29077281 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 29077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 19692047 - 19692090
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttagg 338  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  19692047 ttttaggcctatta--gaattaggtcctcttgcttttggtgttagg 19692090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 465
Target Start/End: Complemental strand, 24525786 - 24525688
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 465  Q
    |||||||||||||| |  |||| |||||||  ||||| |||| | || ||| | || || || ||||||||||||||||||| |||||||||| |||||    
T  24525786 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 24525688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 459
Target Start/End: Original strand, 8239711 - 8239780
Alignment:
Q  390 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||  ||||| |||| |||| ||||| || ||||| ||||||| ||||||||||| ||||||||||    
T  8239711 attttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaatataaatagaac 8239780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 9022063 - 9021962
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactac 173  Q
    ||||| |||||||||| | |||  || ||| |||| ||||||||| || || |||||| |||||||| ||| |||| || ||| ||||||||||||||||    
T  9022063 ggccgaaccttggggtttacaaacagctcagtggagctgggcctcccccagttatgggtctaaaaaaaaattatagcccagtagtactactaagtactac 9021964  T
Q  174 cc 175  Q
    ||    
T  9021963 cc 9021962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 340
Target Start/End: Complemental strand, 24525822 - 24525789
Alignment:
Q  307 tagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||| ||||||||||||||||||||||||||    
T  24525822 tagaattaggtcctcttgcttttggtgttaggtg 24525789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 336
Target Start/End: Original strand, 8239638 - 8239679
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgtta 336  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||    
T  8239638 ttttaggcctatta--gaattaggtcctcttgcttttggtgtta 8239679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 10955485 - 10955577
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| || ||  |||| | || ||||| || || || ||||||||||||||||||| ||||||||||    
T  10955485 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 10955577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 20091430 - 20091385
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  20091430 ttttaggcctatta--gaattaggtcctcttacttttggtgttaggtg 20091385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 23551172 - 23551092
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaa 447  Q
    |||||||||||||| |  |||| ||||||| ||||||||||| | || ||||| |  || || ||||||||||||||||||    
T  23551172 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaa 23551092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 47985119 - 47985074
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  47985119 ttttaggcctatta--gaattaggtcctcttgctttttgtgttaggtg 47985074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 174; Significance: 2e-93; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 75 - 550
Target Start/End: Complemental strand, 11242714 - 11242235
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactacc 174  Q
    |||||||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||    
T  11242714 ggccggaccttgaggtgtgcaaggagttcaatggaacttggcctctccaaggtatgggcctaaaaaaaaatataacccagtagtactgctaagtactacc 11242615  T
Q  175 ctac--taaaaacaaaatttctt-----tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgat 267  Q
    | ||  ||||||||||| |||||     ||||||||| |||||| ||||||||||| ||||||||||  |||||||||       |||| |||||| |||    
T  11242614 ccactataaaaacaaaaattctttattctttctctctcataccacgcgttccatcatcatcactccaatggactttccttttcttcttccccgattcgat 11242515  T
Q  268 ttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgag 367  Q
    |||||||||||| ||  |||| |||||||| ||||||  |||||||||||||||||||||||||||||||  | ||        ||||||||||||||||    
T  11242514 ttccttttcctcttctcttgttttgttttatgcctat--tagaattgggtcctcttgcttttggtgttagaggggtgtttttttgggagggtggtttgag 11242417  T
Q  368 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 467  Q
    ||||||||||||| |  ||||||||| ||||||||| ||||||||| |||||    |  ||||||||||||||||||||| ||||||||||| ||||||     
T  11242416 gttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacattgttc- 11242318  T
Q  468 ttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    ||||       |||||| ||||||||||||| | ||||||||||||||| ||| || |||||||||||||||||||| |||||    
T  11242317 ttttaaaagaatacgtttttattttattacgagtctcttttcacttacagagccgagcctccggattcataggaacgaccctg 11242235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 92 - 470
Target Start/End: Complemental strand, 2025019 - 2024638
Alignment:
Q  92 tgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactaccctactaaaaacaaaatt 191  Q
    ||||||||| ||||| |||||| ||||| |||||||||||| |||||||| | ||||| || ||| |||||||||||||||||| ||||||||||||| |    
T  2025019 tgcaaggagctcaatagaactgcgcctccccaaggtatgggtctaaaaaaaattatagcccagtagtactactaagtactaccccactaaaaacaaaaat 2024920  T
Q  192 tcttt-------ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcag 284  Q
    || ||       ||||||||||||||  |||||||||||||||||||||||| ||||||||       |||| |||||||||||||||||||||| |  |    
T  2024919 tccttattctctttctctctgataccgcgcgttccatcaccatcactccatctgactttccttttcttcttccccgatttgatttccttttcctcttatg 2024820  T
Q  285 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaa 384  Q
    |||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||        |||||| |||||||||| |||||||||||        
T  2024819 ttgtcttgttttaggcatat--tagaattgagtcctcttgcttttggtgttaggtgtgt--ttttttgggaggatggtttgaggatcctcatgtatatgg 2024724  T
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    ||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  2024723 tagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattgttctttt 2024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 74 - 470
Target Start/End: Original strand, 34425609 - 34426007
Alignment:
Q  74 aggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat--ataggccggtaatactactaagtact 171  Q
    |||||| |||||||| | ||||| ||| ||||| |||||||| ||  |||||||||| |  | ||||| |||  |||| || ||| || |||||||||||    
T  34425609 aggccgaaccttggg-tgtgcaaagagctcaattgaactgggtcttcccaaggtatgagtttcaaaaaaaatttatagcccagtagtattactaagtact 34425707  T
Q  172 accctactaaaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttg 265  Q
    |||| ||||||||||||||| ||       ||||||| ||||||||  ||||||||| |||| |||||||| || ||| |       || | ||||||||    
T  34425708 accccactaaaaacaaaattcctcatcctctttctctttgataccacacgttccatcgccataactccatcagaattttctttt---ctgccccgatttg 34425804  T
Q  266 atttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttg 365  Q
    |||||||||| | | || |||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||        ||||||||||||||    
T  34425805 atttcctttttcccttctgttgtcttgttttaggcctatta--gaattgagtcctcttgcttttggtgttaggtgagtgtttttttgggagggtggtttg 34425902  T
Q  366 aggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 465  Q
    ||||||||||||||| |  || ||||||| |||||| | ||||||||| ||||| || || ||||||||||||||||||||||| ||||||||| |||||    
T  34425903 aggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattgtt 34426002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 160 - 469
Target Start/End: Original strand, 2411882 - 2412191
Alignment:
Q  160 ctactaagtactaccctactaaaaacaaa-att--tctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttc 256  Q
    |||||||||||||||| |||||||| ||  |||  ||| ||||||| |||||||| | |||||||||||||||||||||| ||||||||       ||||    
T  2411882 ctactaagtactaccccactaaaaaaaatcattattctctttctctttgataccacgtgttccatcaccatcactccatcagactttccttttcttcttc 2411981  T
Q  257 tccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgt-gtannnnnnnggga 355  Q
     || ||||||||||||||||||| |  |||||||||||||||||||||||  |||||| |  ||||| |||||||||||||| |  ||        ||||    
T  2411982 cccaatttgatttccttttcctcttatgttgtcttgttttaggcctatta--gaattgagcactcttacttttggtgttaggcgacgt--tttttaggga 2412077  T
Q  356 gggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 455  Q
    ||||||||||||||||||||||||| || ||||||||||||  |||||||| ||| || ||||| |  || |||||||||| ||||||||||||||||||    
T  2412078 gggtggtttgaggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaata 2412177  T
Q  456 gaacgttgttcttt 469  Q
    |||| |||||||||    
T  2412178 gaacattgttcttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 253 - 469
Target Start/End: Complemental strand, 14318595 - 14318382
Alignment:
Q  253 cttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnng 352  Q
    ||||||||||||||||||||||||||| |  || || ||||||||||||||||| |  | |||||||||||||||||||| ||||||| ||        |    
T  14318595 cttctccgatttgatttccttttcctcttttgtagttttgttttaggcctattaaa--actgggtcctcttgcttttggtcttaggtgggtgtttttttg 14318498  T
Q  353 ggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaa 452  Q
    | |||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||||| ||||| |  || ||||||||||||||||||||||||||    
T  14318497 g-agggtggtttgaggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaa 14318399  T
Q  453 atagaacgttgttcttt 469  Q
    ||||||| |||||||||    
T  14318398 atagaacattgttcttt 14318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 354 - 549
Target Start/End: Complemental strand, 2531009 - 2530815
Alignment:
Q  354 gagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaa 453  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||||||| |  | ||||| |  |||||||||||||||||||||||| |||||    
T  2531009 gagggtggtttgaggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaa 2530910  T
Q  454 tagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccct 549  Q
    |||||| || |||||||        ||| || ||||||||||||||||||||||||||||||| |||  ||||| | ||||| ||||| |||||||    
T  2530909 tagaacatt-ttcttttaagaaaaatacatttttattttattacgggcctcttttcacttacagagccaaaccttcagattcgtaggagcggccct 2530815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 78 - 469
Target Start/End: Original strand, 10543392 - 10543776
Alignment:
Q  78 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa--tataggccggtaatactactaagtactaccc 175  Q
    ||||| || |||| ||||||||| ||||| |||  |||||||  ||||||||| || | ||||||||  ||||| |  ||| ||||||||| ||||||||    
T  10543392 cggactttagggtgtgcaaggagctcaatagaatcgggcctcctcaaggtatgagcttcaaaaataaattatagcctagtagtactactaaatactaccc 10543491  T
Q  176 tactaaaaacaaaatt--tctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttcctt 273  Q
    ||||||||| ||| ||  ||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||       |||  ||||||||||||||||    
T  10543492 tactaaaaaaaaacttattctctttctctcggataccatgcgttccatcatcatcactccgtcggactttccttttattctttcccgatttgatttcctt 10543591  T
Q  274 ttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcct 373  Q
    |||||| |  |||||||| ||||||||||||  |||||| ||        |||||||||||| |||| ||        |||||||||||||||| |||||    
T  10543592 ttcctcttatgttgtcttattttaggcctat--tagaatcgg-------agcttttggtgttgggtgagt-gttttttgggagggtggtttgagattcct 10543681  T
Q  374 catgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
     |||||| |  |||||||||||| ||||||||||||| || |||||    || || ||||||||||||||||||||||| | |||| || ||||||    
T  10543682 -atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacattattcttt 10543776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 191 - 535
Target Start/End: Complemental strand, 40794598 - 40794257
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| ||||||| |||||||| ||||||||| ||||||| ||||||  |||||||       |||| | ||||||||||| |||||||| |  |||||||    
T  40794598 ttctctttctctttgataccacgcgttccattaccatcattccatcaaactttccttttcttcttcccggatttgatttctttttcctcttttgttgtct 40794499  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    |||||||||| |||||  ||||||||||||||| ||||||||||||||| || |          |||||||||||||||| ||||||||| |  ||||||    
T  40794498 tgttttaggcttatta--gaattgggtcctcttacttttggtgttaggt-tg-atgttttttttagggtggtttgaggtttctcatgtatacggtagtga 40794403  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt-tnnnnnnntacgttgttat 489  Q
    |||||| |||| | ||||||| | || || ||  | |||||||| |||||||||||||||||||| ||| ||||||||||          ||||| ||||    
T  40794402 ttttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacattgttcttttaaaaaaaaaaacgtttttat 40794303  T
Q  490 tttattacgggcctcttttcacttacaaagcagaacctccggattc 535  Q
    ||||||||| ||||||||||||||||| ||| || |||||| ||||    
T  40794302 tttattacgagcctcttttcacttacagagccgagcctccgaattc 40794257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 75 - 279
Target Start/End: Original strand, 15639160 - 15639369
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa--tataggccggtaatactactaagtacta 172  Q
    ||||| |||||| ||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||| ||  ||||| || ||| |||||||||||||||    
T  15639160 ggccgtaccttgaggtgtgcaaggagctcaatggaactggagctccccaaggtatgggcctaaaaaaaaaattatagtccagtagtactactaagtacta 15639259  T
Q  173 ccctactaaaaacaaaa---tttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgattt 269  Q
    ||| |||||||| |  |    |||| ||||||||||||||||  |||||||||||||||||||  ||| | |||||       |||| ||||||||||||    
T  15639260 ccccactaaaaaaattacttattctctttctctctgataccacacgttccatcaccatcactctgtcgaattttccctttcttcttccccgatttgattt 15639359  T
Q  270 ccttttcctc 279  Q
    ||||||||||    
T  15639360 ccttttcctc 15639369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 370 - 550
Target Start/End: Complemental strand, 26719045 - 26718865
Alignment:
Q  370 tcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    ||||||||||| |  |||||||||||| |||||  |||||| || ||||| |  || |||||||||||||||||||| |||||||||||| || ||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt 26718946  T
Q  470 ttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
             |||||| ||||||||||||||| ||||||||||||||| | | || ||||||||||||||||||||||||||    
T  26718945 aaaaaaaaatacgtttttattttattacgggtctcttttcacttacagaaccgagcctccggattcataggaacggccctg 26718865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 370 - 550
Target Start/End: Complemental strand, 26988789 - 26988609
Alignment:
Q  370 tcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    ||||||||||| |  |||||||||||| |||||  |||||| || ||||| |  || |||||||||||||||||||| |||||||||||| || ||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt 26988690  T
Q  470 ttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
             |||||| ||||||||||||||| ||||||||||||||| | | || ||||||||||||||||||||||||||    
T  26988689 aaaaaaaaatacgtttttattttattacgggtctcttttcacttacagaaccgagcctccggattcataggaacggccctg 26988609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 352 - 470
Target Start/End: Complemental strand, 36868990 - 36868872
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||||||||||||| |||||||||||| |  ||||||||||||  ||||| |||| |||| ||||| |  || ||||||||||||||||||||| |||    
T  36868990 gggagggtggtttgagattcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaatta 36868891  T
Q  452 aatagaacgttgttctttt 470  Q
    |||||||| ||||||||||    
T  36868890 aatagaacattgttctttt 36868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 357 - 468
Target Start/End: Complemental strand, 22648845 - 22648734
Alignment:
Q  357 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 456  Q
    |||||||||||||| || || ||| || |||||||| ||| ||||||||||  |||| ||||| |  |||||||||||||||||||||||||||||||||    
T  22648845 ggtggtttgaggtttcttatttatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatag 22648746  T
Q  457 aacgttgttctt 468  Q
    ||| ||||||||    
T  22648745 aacattgttctt 22648734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 308 - 470
Target Start/End: Original strand, 33037721 - 33037884
Alignment:
Q  308 agaattgggtcctcttgcttttggtgttaggt--gtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggat 405  Q
    ||||||||||||||||||||||||||||||||  ||||        || | |||||||||||||||||||||||| |  || || |||||| |||||| |    
T  33037721 agaattgggtcctcttgcttttggtgttaggtaggtgtttttttttgg-atggtggtttgaggttcctcatgtatacggtaatggttttcacctttgggt 33037819  T
Q  406 gtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||  ||| ||||| | ||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  33037820 gtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattgttctttt 33037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 284 - 550
Target Start/End: Original strand, 10407378 - 10407645
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgct---tttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtat 380  Q
    |||||||||||||||||||||||  ||||||||||||||||||   ||||||||||| ||  |        |||| ||||||| ||| ||||||||| ||    
T  10407378 gttgtcttgttttaggcctatta--gaattgggtcctcttgctccttttggtgttagatgaatgtttttttgggatggtggttggagattcctcatgcat 10407475  T
Q  381 tcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnnta 480  Q
     |  |||| |||||||  ||| ||||||  ||| || || |  || |||| |||||||||||||||||||||||||||| ||||||||||        ||    
T  10407476 acggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacattgttcttttaaaaaaaata 10407575  T
Q  481 cgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    | || ||||||||||| || |||||||||||||| | | | |||||||  ||||| |||||||| |||||    
T  10407576 cttttttattttattatggacctcttttcacttatagaaccgaacctctagattcgtaggaacgaccctg 10407645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 34307407 - 34307320
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcct 278  Q
    |||| ||||||||||||||||   |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||    
T  34307407 ttctctttctctctgataccacatgttccatcaccatcactccatcggactttccttttcttcttctccgatttgatttccttttcct 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 15639570 - 15639724
Alignment:
Q  288 tcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatag 387  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||           || ||||||| |||||||| |||||| | | ||    
T  15639570 tcttgttttaggcctatta--gaattgggtcctcttacttttggtgttaggtgagtgttttttt---agagtggtttaaggttccttatgtatacgacag 15639664  T
Q  388 tgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaa 447  Q
    ||||||||||||||||||||||| || ||||| |  || |||||||||||||| ||||||    
T  15639665 tgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatctttaaaaaaa 15639724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 516
Target Start/End: Complemental strand, 1366640 - 1366476
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    ||||||||||| ||||||||||||| ||| |  ||||||||||||  ||| | |||||| || |||||    |  ||||||||||||| |||||||||||    
T  1366640 gggagggtggtatgaggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaattta 1366541  T
Q  452 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttaca 516  Q
    |||||||| ||||||||||        |||||| ||||||| |||||| |||||||| |||||||    
T  1366540 aatagaacattgttcttttaaaaaaaatacgtttttatttttttacggacctctttttacttaca 1366476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 216 - 546
Target Start/End: Original strand, 24395590 - 24395918
Alignment:
Q  216 ttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgg 315  Q
    ||||||||||||||||||||| ||||||||       |||| |||||||||||||||||||||| |  |||| |||||||||  |||||  ||||||||     
T  24395590 ttccatcaccatcactccatcagactttccttttcttcttccccgatttgatttccttttcctcttatgttgccttgttttatacctat--tagaattga 24395687  T
Q  316 gtcctcttgcttttggtgttaggtg--tgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcaca 413  Q
    ||| |||||||||||   |||| ||  |||          ||||||||||| | ||||||||| ||| |  | |||||||||| ||||||||||||   |    
T  24395688 gtcatcttgcttttgacattagatggatgt-ttttttttagagggtggtttaaagttcctcatctatacggtggtgattttcacctttggatgtattgta 24395786  T
Q  414 catataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcactt 513  Q
     |||||    || ||||||||||||||||||||||||||||||||| || || ||||        ||| || |||||||||||||||  |||||| | ||    
T  24395787 tatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattatt-ttttaaaaaaaatacatttttattttattacgggtttctttttattt 24395885  T
Q  514 acaaagcagaacctccggattcataggaacggc 546  Q
    ||| ||| | |||||||||||| ||||||||||    
T  24395886 acagagccgtacctccggattcgtaggaacggc 24395918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 26719169 - 26719054
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||       |||  | ||||||||||| |||||||| || ||||| |    
T  26719169 ttctctttctctctgataccacgcgttccatcaccatcactgcatcgaactttccttttcttctttcctgatttgatttcattttcctcttctgttgttt 26719070  T
Q  291 tgttttaggcctatta 306  Q
     |||||||||||||||    
T  26719069 agttttaggcctatta 26719054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 26988913 - 26988798
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||       |||  | ||||||||||| |||||||| || ||||| |    
T  26988913 ttctctttctctctgataccacgcgttccatcaccatcactgcatcgaactttccttttcttctttcctgatttgatttcattttcctcttctgttgttt 26988814  T
Q  291 tgttttaggcctatta 306  Q
     |||||||||||||||    
T  26988813 agttttaggcctatta 26988798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 27079012 - 27079115
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| || |||| ||||||| |||| | |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  27079012 ggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 27079111  T
Q  467 tttt 470  Q
    ||||    
T  27079112 tttt 27079115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 430 - 552
Target Start/End: Complemental strand, 35080806 - 35080686
Alignment:
Q  430 tatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctcc 529  Q
    |||||||||||||||||||||||||| ||| ||||||||||        ||  || |||||||||||||| |||||||||||||||| ||  || ||||     
T  35080806 tatttatcttttaaaaaatttaaataaaacattgttcttttaaaaaaaata--tttttattttattacggccctcttttcacttacagagtcgagcctct 35080709  T
Q  530 ggattcataggaacggccctgat 552  Q
     ||||| ||||||||||||||||    
T  35080708 agattcgtaggaacggccctgat 35080686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 606215 - 606258
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  606215 ttgtatttatcttttaaaaaatttaaatagaacattgttctttt 606258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 30854330 - 30854433
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| | ||||| ||||||| || ||  |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  30854330 ggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 30854429  T
Q  467 tttt 470  Q
    ||||    
T  30854430 tttt 30854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 34756465 - 34756362
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  34756465 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 34756366  T
Q  467 tttt 470  Q
    ||||    
T  34756365 tttt 34756362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 9364292 - 9364384
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| ||||||||||    
T  9364292 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 9364384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 16198893 - 16198801
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| |||||| |||||| || ||||| |  || || ||||||||||||||||||| ||||||||||    
T  16198893 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 16198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 471
Target Start/End: Original strand, 27530544 - 27530588
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttttt 471  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||    
T  27530544 ttgtattaatcttttaaaaaatttaaatagaacattgttcttttt 27530588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 28822441 - 28822338
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    ||||| |||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  28822441 ggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 28822342  T
Q  467 tttt 470  Q
    ||||    
T  28822341 tttt 28822338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 553
Target Start/End: Complemental strand, 38869462 - 38869276
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||| ||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||||| ||| ||    
T  38869462 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctc 38869363  T
Q  467 tttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgatg 553  Q
    ||||        |||||| | ||||||| || | |||||||||| |  || ||| || |||||| |||| |||| ||||||||||||    
T  38869362 ttttaaaaaaaatacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccctgatg 38869276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 7670877 - 7670922
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  7670877 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 7670922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 16198941 - 16198896
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  16198941 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 16198896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 19523200 - 19523292
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    ||||||||||||||    |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  19523200 ggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 19523292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 456
Target Start/End: Original strand, 27924084 - 27924172
Alignment:
Q  368 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 456  Q
    ||||||||||||| |  |||| ||||| | ||||||||||| | || ||||| || || || ||||||||||||||||||| |||||||    
T  27924084 gttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatag 27924172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 28822489 - 28822444
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  28822489 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 28822444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 470
Target Start/End: Complemental strand, 31881510 - 31881430
Alignment:
Q  390 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||| |||||||  | || ||||| || ||  ||||||||||||||||||||| |||||||||| ||| ||||||    
T  31881510 attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctctttt 31881430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 38869510 - 38869465
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  38869510 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 38869465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 458
Target Start/End: Original strand, 22875003 - 22875034
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaa 458  Q
    ||||||||||||||||||||||||||||||||    
T  22875003 ttgtatttatcttttaaaaaatttaaatagaa 22875034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 23284161 - 23284058
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| |||||||||||||| |||| | || ||||| |  || |||||||||   |||||||||| |||||||||| ||| ||    
T  23284161 ggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattgctc 23284062  T
Q  467 tttt 470  Q
    ||||    
T  23284061 tttt 23284058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 31194651 - 31194608
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  31194651 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 31194608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 469
Target Start/End: Original strand, 7338060 - 7338102
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    |||||||||||||||||||||| |||||||||| ||| |||||    
T  7338060 ttgtatttatcttttaaaaaatataaatagaacattgctcttt 7338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 459
Target Start/End: Complemental strand, 36187980 - 36187886
Alignment:
Q  365 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||| ||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||| ||||||||||| ||||||||||    
T  36187980 gaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatataaatagaac 36187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 40389617 - 40389543
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||| ||||||| ||||||||||| | || ||||| |  || || ||||||||||||||||||| ||||||||||    
T  40389617 tagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 40389543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 27530614 - 27530679
Alignment:
Q  486 ttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctga 551  Q
    ||||||||||||||||||||||||||||| | | | || ||||   |||| |||||||||||||||    
T  27530614 ttattttattacgggcctcttttcacttatagaaccgagcctctaaattcgtaggaacggccctga 27530679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 2274951 - 2274983
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  2274951 ttgtatttatcttttaaaaaatataaatagaac 2274983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 7079552 - 7079605
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 339  Q
    ||||||||||||||| |||||||  ||||| |||| ||||||||||| ||||||||    
T  7079552 gttgtcttgttttagacctatta--gaattaggtcatcttgcttttgatgttaggt 7079605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Complemental strand, 15480128 - 15480096
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  15480128 ttgtatttatcttttaaaaaatataaatagaac 15480096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 16799426 - 16799334
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  || | ||||||| |||||| |||| | || ||||| || || || ||||||| ||||||||||| ||||||||||    
T  16799426 ggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatataaatagaac 16799334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 34307484 - 34307416
Alignment:
Q  72 caaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaa 140  Q
    |||||||||||||||||||  ||||| || |||||||||| || ||||  | |||||||||||| ||||    
T  34307484 caaggccggaccttggggtgcgcaagaagctcaatggaaccggacctcctcgaggtatgggcctcaaaa 34307416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 40389683 - 40389638
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  40389683 ttttaggcctatta--gaattaggtcctcttgcttttagtgttaggtg 40389638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 2e-90; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 75 - 550
Target Start/End: Complemental strand, 39135125 - 39134638
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa---tataggccggtaatactactaagtact 171  Q
    ||||| |||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||| ||||| ||   ||||| || ||| ||||||||||||||    
T  39135125 ggccgaaccttggggtgtgcaaagagctcaatggaactgggcctccccaaggtatgggcctcaaaaacaaaattatagcccagtagtactactaagtact 39135026  T
Q  172 accctactaaaaacaaa---atttcttt-----ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatt 263  Q
    |||| | |||||| |||   ||||| ||     |||||||||||||||||||||||||||||||||||||||| || |||||       |||| ||||||    
T  39135025 accccagtaaaaaaaaacaaatttccttattctttctctctgataccatgcgttccatcaccatcactccatcagattttccttttcttcttccccgatt 39134926  T
Q  264 tgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtt 363  Q
    |||||| ||||||||| || |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||        ||||||||||||    
T  39134925 tgattttcttttcctcttctgttgtcttgttttaagcctat--tagaattgggtcctcttgcttttggtgttaggtgggtgtttttttgggagggtggtt 39134828  T
Q  364 tgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatc-ttttaaaaaatttaaatagaacgtt 462  Q
    ||||||||||||||||| || |||||||| ||| |||||| |||||  || |||||  | || ||||||||||| |||||||||||||||||||||| ||    
T  39134827 tgaggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacatt 39134728  T
Q  463 gttctttt--tnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    ||||||||          |||||| ||||||||||||| | ||||||||||||||  ||| || ||||||||||| ||||||||||||||    
T  39134727 gttcttttaaaaaaaaaatacgtttttattttattacgagtctcttttcacttacggagccgagcctccggattcgtaggaacggccctg 39134638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 191 - 514
Target Start/End: Complemental strand, 10926219 - 10925908
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||| || |||||||    
T  10926219 ttctctttctctctggtaccatgcgttccatcaccatcactccatcagactttccttttcttcttctccgatttgatttccttttcctcttctgttgtct 10926120  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    ||||       |||  ||||| ||| | |||||||||||||||||||||| ||           |||||| ||||||| ||||||||||| |  ||||||    
T  10926119 tgtt-------tat--tagaactggattctcttgcttttggtgttaggtgagtgttttttt---agggtgatttgaggatcctcatgtatacggtagtga 10926032  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaa-atttaaatagaacgttgttctttttnnnnnnntacgttgttat 489  Q
    |||||||||||||||| ||| || ||||| || ||||||||||||| ||||||||| | ||||||||||  |||||| ||||       || ||| ||||    
T  10926031 ttttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaaatacttaaatagaatattgttc-ttttaaaaaaataagtttttat 10925933  T
Q  490 tttattacgggcctcttttcactta 514  Q
    |||||||||||| ||||||||||||    
T  10925932 tttattacgggcttcttttcactta 10925908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 550
Target Start/End: Complemental strand, 38547207 - 38546954
Alignment:
Q  295 ttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgatttt 394  Q
    ||||||||||||  ||||| ||||||||| ||||| |||||||||| ||        |||||||||||||||||||||||||||||   |||||||||||    
T  38547207 ttaggcctatta--gaatttggtcctcttacttttagtgttaggtgggtgtttttttgggagggtggtttgaggttcctcatgtatatgatagtgatttt 38547110  T
Q  395 catctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttat 494  Q
    ||  ||||| |||| |||| ||||| || || ||||||||||||||||||||||||||||||||| ||| |||||         | | || |||||||||    
T  38547109 cacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgatctttaaaaaaaaattcctttttattttat 38547010  T
Q  495 tacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    |||||||| |||||||||| || ||| || |||||  |||| ||||||||||||||    
T  38547009 tacgggccccttttcacttgcagagccgatcctccaaattcgtaggaacggccctg 38546954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 163 - 469
Target Start/End: Original strand, 26803758 - 26804059
Alignment:
Q  163 ctaagtactaccctactaaaaacaaaat-ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccga 261  Q
    ||||||||||||| ||||||||   | | |||| ||||||||| |||||  | |||||||||||||||||||||| |||||| |       |||  ||||    
T  26803758 ctaagtactaccccactaaaaaatcattattctctttctctctaataccgcgtgttccatcaccatcactccatcagacttttcttttcttctttcccga 26803857  T
Q  262 tttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtgg 361  Q
    ||||||||| |||||||| || ||||||||||||||| |||||  |||||||| ||  ||||||||||||||||||||| ||        ||||||||||    
T  26803858 tttgatttctttttcctcttctgttgtcttgttttagtcctat--tagaattgagttatcttgcttttggtgttaggtgagt-gttttttgggagggtgg 26803954  T
Q  362 tttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgt 461  Q
    ||||||||| ||||||||| |  |||||||||||| |||    |||||| || ||||| |  |  ||||||||||||||||||||||||||||| | | |    
T  26803955 tttgaggtttctcatgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaatatagcat 26804051  T
Q  462 tgttcttt 469  Q
    ||||||||    
T  26804052 tgttcttt 26804059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 352 - 547
Target Start/End: Original strand, 45758491 - 45758688
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||| |||||||||||||||||||||||| |  |||||||||||| |||||||||||| ||| |||||    || ||| |||||||||||||||||||||    
T  45758491 gggatggtggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaattta 45758590  T
Q  452 aatagaacgttgttctttt--tnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggcc 547  Q
    |||||||| ||||||||||          ||| || |||||||||| ||| |||||||||||||||| ||| || |||| |||||| |||||||||||    
T  45758591 aatagaacattgttcttttaaaaaaaatatacatttttattttatttcggacctcttttcacttacagagccgagcctctggattcgtaggaacggcc 45758688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 285 - 519
Target Start/End: Complemental strand, 43235951 - 43235717
Alignment:
Q  285 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaa 384  Q
    |||| |||| ||||||||||||  |||||| ||||| ||||||||||||||||||   |        |||| |||||||||||||||||||||||| | |    
T  43235951 ttgttttgtattaggcctatta--gaattgagtcctattgcttttggtgttaggttgatgtttttttgggatggtggtttgaggttcctcatgtatacga 43235854  T
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttt--taaaaaatttaaatagaacgttgttctttttnnnnnnntacg 482  Q
    |||||||||||| |||||| ||||   || ||||| |  |  ||||||||||||||   |||||||||||||||||| || ||||||         |||     
T  43235853 tagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatttttctttagaaaaaaataca 43235754  T
Q  483 ttgttattttattacgggcctcttttcacttacaaag 519  Q
    || |||||||||||| |||||||||||||||||||||    
T  43235753 tttttattttattacaggcctcttttcacttacaaag 43235717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 284 - 550
Target Start/End: Original strand, 5533242 - 5533507
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn-gggagggtggtttgaggttcctcatgtattc 382  Q
    |||||||||||||| ||||||||  ||||||| |||||||||||||| ||||||||| |          |||| ||||||||||| |||||||||||| |    
T  5533242 gttgtcttgttttacgcctatta--gaattggatcctcttgcttttgatgttaggtgggagttttttttgggatggtggtttgagtttcctcatgtatac 5533339  T
Q  383 aatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaatttaaatagaacgttgttctttttnnnnnnntac 481  Q
      |||||||||||| |||||  ||||   || ||||| || || |||| |||||||||| |||||||||||||||||  |||||| ||||       |||    
T  5533340 ggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattgttc-ttttaaaaaaatac 5533438  T
Q  482 gttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
     || ||||||||||||||| ||||||||||||||| ||   | ||||||||||| ||| ||||| ||||    
T  5533439 atttttattttattacgggtctcttttcacttacagagtcaagcctccggattcgtagaaacgggcctg 5533507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 355 - 469
Target Start/End: Original strand, 6221678 - 6221791
Alignment:
Q  355 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 454  Q
    |||||||||||||||||||||| ||| | ||| |||||||||  ||| |||||| | |  ||||| || |||||||||||||||||| ||||||||||||    
T  6221678 agggtggtttgaggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaat 6221776  T
Q  455 agaacgttgttcttt 469  Q
    ||||| |||||||||    
T  6221777 agaacattgttcttt 6221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 470
Target Start/End: Original strand, 38853527 - 38853637
Alignment:
Q  359 tggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 458  Q
    ||||||||||||| |||||||| |  |||||||||||| |||||||| ||  ||| ||||| |  || ||||||||||| ||||||||||||||||||||    
T  38853527 tggtttgaggttc-tcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaa 38853625  T
Q  459 cgttgttctttt 470  Q
    |  |||||||||    
T  38853626 cactgttctttt 38853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 465
Target Start/End: Complemental strand, 9173124 - 9173026
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 465  Q
    |||||||||||||| |  |||| ||||||| ||||||||||| | || ||||| || || || ||||||||||||||||||| |||||||||| |||||    
T  9173124 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 9173026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 465
Target Start/End: Complemental strand, 9181106 - 9181008
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 465  Q
    |||||||||||||| |  |||| ||||||| ||||||||||| | || ||||| || || || ||||||||||||||||||| |||||||||| |||||    
T  9181106 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 9181008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 14146312 - 14146404
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| |||||||||| ||| |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  14146312 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 14146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 5316692 - 5316795
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  5316692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 5316791  T
Q  467 tttt 470  Q
    ||||    
T  5316792 tttt 5316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 23185439 - 23185542
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  23185439 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 23185538  T
Q  467 tttt 470  Q
    ||||    
T  23185539 tttt 23185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 469
Target Start/End: Complemental strand, 4971719 - 4971617
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| |||||||  | ||| |||| | || ||||| ||||| |||||||||||||||||||||| |||||||||| ||| ||    
T  4971719 ggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgctc 4971620  T
Q  467 ttt 469  Q
    |||    
T  4971619 ttt 4971617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 468
Target Start/End: Complemental strand, 1366979 - 1366878
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||| ||||| |  |||| |||||||||||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  1366979 ggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 1366880  T
Q  467 tt 468  Q
    ||    
T  1366879 tt 1366878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 470
Target Start/End: Original strand, 50881440 - 50881545
Alignment:
Q  365 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgt 464  Q
    |||||||||||||||| |  |||| ||||||| || | |||||| | || ||||| |  || |||||||||||||||||||||| |||||||||| |||     
T  50881440 gaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgc 50881539  T
Q  465 tctttt 470  Q
    ||||||    
T  50881540 tctttt 50881545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 470
Target Start/End: Original strand, 6889646 - 6889726
Alignment:
Q  390 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    ||||||| || |||||||| | || ||||| | ||| |||||||||||||||||||||| |||||||||| ||| ||||||    
T  6889646 attttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt 6889726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 470
Target Start/End: Original strand, 6891492 - 6891572
Alignment:
Q  390 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    ||||||| || |||||||| | || ||||| | ||| |||||||||||||||||||||| |||||||||| ||| ||||||    
T  6891492 attttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt 6891572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 17322668 - 17322621
Alignment:
Q  423 tacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  17322668 tacattgtatttatctttaaaaaaatataaatagaacattgttctttt 17322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 459
Target Start/End: Original strand, 6771801 - 6771895
Alignment:
Q  365 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||| ||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  6771801 gaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 6771895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 457
Target Start/End: Original strand, 19955729 - 19955819
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaataga 457  Q
    |||||||||| ||| |  |||| ||||||| |||||| |||| | || ||||| ||||| || ||||||||||||||||||| ||||||||    
T  19955729 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 19955819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 5027579 - 5027664
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||||||    
T  5027579 tagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 5027664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 470
Target Start/End: Complemental strand, 21741020 - 21740935
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||| ||||||| || ||| |||||| || ||||| || || ||||||||||||||||||||||  ||||||||| ||| ||||||    
T  21741020 tagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctctttt 21740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 9181154 - 9181109
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  9181154 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 9181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 551
Target Start/End: Original strand, 17169031 - 17169152
Alignment:
Q  430 tatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctcc 529  Q
    ||||||||||||||||||| |||||||||| ||| | |||||       |||||| | ||||||| || | |||||||||| || || ||| || |||||    
T  17169031 tatttatcttttaaaaaatataaatagaacattgctttttttaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctcc 17169130  T
Q  530 ggattcataggaacggccctga 551  Q
    | |||| |||| ||||||||||    
T  17169131 gaattcttagggacggccctga 17169152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 19955681 - 19955726
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  19955681 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 19955726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 27559649 - 27559741
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| ||||||||||    
T  27559649 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 27559741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 41697238 - 41697146
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| |||||||  | ||||||||   || ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  41697238 ggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatataaatagaac 41697146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 44895616 - 44895661
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  44895616 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 44895661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 50146307 - 50146411
Alignment:
Q  366 aggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 465  Q
    |||||||||||||||    || ||||||| | |||||| | ||||||| ||| | || || ||| |||||||||| ||||| |||||||||||| |||||    
T  50146307 aggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacattgtt 50146406  T
Q  466 ctttt 470  Q
    |||||    
T  50146407 ctttt 50146411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 22865502 - 22865459
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  22865502 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 22865459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 44655813 - 44655856
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  44655813 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 44655856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 50146068 - 50146154
Alignment:
Q  102 tcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactaccctactaaaaacaa 187  Q
    ||||||||  |||||||||| |||||||  |||||||||| ||| |||| || ||  |||||||||||||||||| ||||| |||||    
T  50146068 tcaatggagttgggcctcactaaggtatcagcctaaaaaaaaattatagcccagtggtactactaagtactaccccactaataacaa 50146154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 35392300 - 35392384
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||| |||||||| || | || ||||| || || |||||||||||  |||||||||||||||| ||| || |||||||    
T  35392300 tagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacattattctttt 35392384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 1367027 - 1366982
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  1367027 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 1366982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 3406490 - 3406522
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  3406490 ttgtatttatcttttaaaaaatataaatagaac 3406522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Complemental strand, 3440330 - 3440298
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  3440330 ttgtatttatcttttaaaaaatataaatagaac 3440298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 4971767 - 4971722
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  4971767 ttttaggcctatta--gaattagttcctcttgcttttggtgttaggtg 4971722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 9173172 - 9173127
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  9173172 ttttaggcctatta--gaattaggtcctcttacttttggtgttaggtg 9173127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 13913631 - 13913586
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  13913631 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 13913586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 16140127 - 16140159
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  16140127 ttgtatttatcttttaaaaaatataaatagaac 16140159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 23185391 - 23185436
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  23185391 ttttaggcctatta--gaattagttcctcttgcttttggtgttaggtg 23185436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 1e-82; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 72 - 552
Target Start/End: Complemental strand, 21666099 - 21665618
Alignment:
Q  72 caaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtact 171  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||   |  |||||  | | | |||||||||| |||    
T  21666099 caaggccggaccttggggtgtgcaaggagctcaatggaactgggcctccccaaggtatgggcctaaatttttttatagctcagcagtactactaagcact 21666000  T
Q  172 accctactaaaaacaaaat-----ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttga 266  Q
    |||| |||||||| ||| |     |||| ||||||| |||||||| ||||||||||| |||||||||||| ||||||||       |||| || ||||||    
T  21665999 accccactaaaaa-aaattccttattctctttctctttgataccacgcgttccatcatcatcactccatcagactttccttttcttcttccccaatttga 21665901  T
Q  267 tttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttga 366  Q
    ||||||||||||| || |||||||||||||| | ||||  |||||||||||||||||||||| ||||||||||| ||         |||||||||||||     
T  21665900 tttccttttcctcatctgttgtcttgttttatgtctat--tagaattgggtcctcttgctttaggtgttaggtgggtgtttttttaggagggtggtttgt 21665803  T
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  ||||||||||||  ||| ||||||||||| ||||| |  ||  |||||||||||||||||||||||||||||||| ||||||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattgttc 21665703  T
Q  467 tttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgat 552  Q
     ||||       ||| || ||||||||||||||| ||||||||||||||| ||| || ||||| ||||| |||||||  |||||||    
T  21665702 -ttttaaaaaaatacatttttattttattacgggtctcttttcacttacagagccgaccctccagattcgtaggaacaaccctgat 21665618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 75 - 419
Target Start/End: Complemental strand, 11953009 - 11952656
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa----tataggccggtaatactactaagtac 170  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||| |||||||||| |||| ||||||||    ||||| || ||| |||||||||||||    
T  11953009 ggccgaaccttggggtgtgcaaggagctcaatggaactgggcctccccaaggtatgagcctcaaaaataaaatttatagccctgtagtactactaagtac 11952910  T
Q  171 taccctactaaaaacaaaatttcttt-------ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatt 263  Q
    ||| | ||||||||||||| ||||||       ||||||||| ||||| |||||||||||||||||||||| ||| ||||||       |||| ||||||    
T  11952909 tactccactaaaaacaaaaattctttattctctttctctctggtaccacgcgttccatcaccatcactccaccgggctttccttttcttcttccccgatt 11952810  T
Q  264 tgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtt 363  Q
    |||||||||||||||| ||  ||||||||||||||||||||  |||||||| ||||||||| ||| ||||||||||| ||        ||||||||||||    
T  11952809 tgatttccttttcctcttccattgtcttgttttaggcctat--tagaattgagtcctcttgttttaggtgttaggtgagtgtttttttgggagggtggtt 11952712  T
Q  364 tgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatata 419  Q
    ||||||||||||||||| || ||||||||||||||| ||  ||||||||| |||||    
T  11952711 tgaggttcctcatgtatgcagtagtgattttcatctatgagtgtatcacatatata 11952656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 196 - 518
Target Start/End: Complemental strand, 24035816 - 24035496
Alignment:
Q  196 tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttt 295  Q
    |||||||||||| ||| |||||| |||||||||||||||||| | ||||        |||| | |||||||||||||||||||| || ||||||||||||    
T  24035816 tttctctctgatgccacgcgttcgatcaccatcactccatcgaaatttcattttcttcttccctgatttgatttccttttcctcttctgttgtcttgttt 24035717  T
Q  296 taggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttc 395  Q
    |||| ||||||  ||||| ||||||||||||||| |||||||||| ||        |||||||||||||| | |||||||||||| |  |||||||||||    
T  24035716 taggtctatta--gaattaggtcctcttgcttttagtgttaggtgggtgtttttttgggagggtggtttgcgattcctcatgtatgcggtagtgattttc 24035619  T
Q  396 atctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttatt 495  Q
    | |||| | |||||| ||  |||| || || ||||||||||||||||||||||||||||||||| ||||||||||        |||||| ||||||||||    
T  24035618 acctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttcttttaaaagaaatacgtttttattttatt 24035519  T
Q  496 acgggcctcttttcacttacaaa 518  Q
    |||||| ||||||||||||||||    
T  24035518 acgggcatcttttcacttacaaa 24035496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 214 - 516
Target Start/End: Complemental strand, 13800797 - 13800497
Alignment:
Q  214 cgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaatt 313  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||| || |||||||||||| ||||||||||  |||||    
T  13800797 cgttccatcaccatcactccatcggactttcattttcttcttctccgatttgatttcattttcctcttctgttgtcttgttt-aggcctatta--gaatt 13800701  T
Q  314 gggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatcttt-ggatgtatcac 412  Q
    || || ||||||||||||||||||||||||        |||| |||| ||||||||||||| |||||  | |||||||||||| |||| || |||||| |    
T  13800700 ggatcttcttgcttttggtgttaggtgtgtgtttttttgggaaggtgatttgaggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgc 13800601  T
Q  413 acatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcact 512  Q
    | ||||| || || || |||||||||||||||||||||||||||||| |||||||||||       ||| || |||||||||||||  ||||||||||||    
T  13800600 atatatacggcaccttatatttatcttttaaaaaatttaaatagaacattgttctttttaaaaaaatacatttttattttattacgaacctcttttcact 13800501  T
Q  513 taca 516  Q
    ||||    
T  13800500 taca 13800497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 159 - 469
Target Start/End: Complemental strand, 16227683 - 16227368
Alignment:
Q  159 actactaagtactaccctactaaaaacaaaa-tttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnn 251  Q
    |||||||||||||| || ||||||||||||| ||||||      |||||||||||||||| ||||| |||||||||||||||||||| ||||||          
T  16227683 actactaagtactatcccactaaaaacaaaaatttcttattctctttctctctgataccacgcgtttcatcaccatcactccatcggcctttccttttct 16227584  T
Q  252 ncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn 351  Q
     |||| ||||||||||||| |||||||| |  |||||||||||||| | ||||||  |||||| ||| |||| |||||||||||||||| ||            
T  16227583 tcttccccgatttgatttctttttcctcttttgttgtcttgttttatgtctatta--gaattgagtcatcttacttttggtgttaggtgggtggtttttt 16227486  T
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||||||||||||||||||| ||||||  | ||||||||||||||| | | ||||||||| ||||| |  || |||||||||||||||||||||||||    
T  16227485 gggagggtggtttgaggttccttatgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaattta 16227386  T
Q  452 aatagaacgttgttcttt 469  Q
    |||||||  |||||||||    
T  16227385 aatagaaaattgttcttt 16227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 158 - 544
Target Start/End: Original strand, 38400587 - 38400975
Alignment:
Q  158 tactactaagtactaccctactaaaaacaaaatttctttttctct------ctgataccatgcgttccatcaccatcactccatcggactttccnnnnnn 251  Q
    |||||||||||||||||| ||||||  ||||||| ||| ||||||      |||||||||   ||||||||||  ||||||||||  ||||||           
T  38400587 tactactaagtactaccccactaaa--caaaattccttattctctttctttctgataccacatgttccatcactgtcactccatcaaactttcgttttct 38400684  T
Q  252 ncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn 351  Q
     |||| || ||||||||| ||||||||  || |||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||| ||            
T  38400685 tcttccccaatttgattttcttttcctgttctgttgtcttgttttaggcctatta--gaatagggtcatcttgcttttggtgttaggtgggtgttttttt 38400782  T
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
      ||||||||||||||||||||||||||| |  |||||||||||| ||||| ||||||| || ||||| |  || |||||||||||||||||||||||||    
T  38400783 aagagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaattta 38400882  T
Q  452 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacg 544  Q
    |||||||| |||||||| |        || ||| |||||||||| |||| ||||||||||||||| ||| |||| | ||||||| || |||||    
T  38400883 aatagaacattgttcttataaaaaatatatgtttttattttattgcgggtctcttttcacttacagagccgaactttcggattcgtaagaacg 38400975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 76 - 471
Target Start/End: Complemental strand, 12134426 - 12134038
Alignment:
Q  76 gccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactaccc 175  Q
    ||||||| ||||||| |||||| || |||||||||| |||||||  |||||||||| |  |||||| | ||||| ||  || ||||||||||||||| ||    
T  12134426 gccggactttggggtgtgcaagaaggtcaatggaaccgggcctcttcaaggtatggcctcaaaaaaaattatagcccaatagtactactaagtactatcc 12134327  T
Q  176 tactaaaaacaaaat--ttctt-tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttcct 272  Q
    || |||||| |||||  || || |||||||||||||| | | ||||||||||        |||| |||||||        |||| | ||| |||||||||    
T  12134326 tattaaaaaaaaaatccttattctttctctctgatactacgtgttccatcact-------catcagactttctttttcatcttccctgatatgatttcct 12134234  T
Q  273 tttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcc 372  Q
    ||||||| ||  ||||||||||||||||||||||  |||||| || ||||||||||||||||||||||| |        |||||||||||||||||||||    
T  12134233 tttcctcttct-ttgtcttgttttaggcctatta--gaattgagttctcttgcttttggtgttaggtgtatgtttttgtgggagggtggtttgaggttcc 12134137  T
Q  373 tcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttttt 471  Q
    | |||||| |  ||||||||||||  ||||| |||||| || ||||| ||||| ||||||||||||||||||   |||||||||||| |||||||||||    
T  12134136 taatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacattgttcttttt 12134038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 75 - 340
Target Start/End: Original strand, 29694087 - 29694357
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactacc 174  Q
    ||||| |||||||||| ||||| ||| |||||||| |||||||||   |||||||||| |||||||| | ||||| ||  || ||||||||||||||||     
T  29694087 ggccgcaccttggggtgtgcaaagagctcaatggagctgggcctccttaaggtatgggtctaaaaaaaattatagcccactagtactactaagtactact 29694186  T
Q  175 ctactaaaaacaaaatttcttt-------ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgat 267  Q
    |  ||||| |  ||||||| ||       |||| |||||||||| |||||||||||||||||||  |||  | |||||       |||| ||||||||||    
T  29694187 ccgctaaacaataaatttccttattctccttctatctgataccacgcgttccatcaccatcactttatcaaattttccttttcttcttccccgatttgat 29694286  T
Q  268 ttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||| |||||||| || ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  29694287 ttctttttcctcttctgttgtcttgttttagacctat--tagaattgggtcctcttgcttttggtgttaggtg 29694357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 267 - 469
Target Start/End: Complemental strand, 11912958 - 11912757
Alignment:
Q  267 tttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn-gggagggtggtttg 365  Q
    ||||||||||||| |  |||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||         ||||||||||||||    
T  11912958 tttccttttcctcttttgttgtcttgttttaggcctatta--gaattgggtcatcttgattttggtgttaggtgagtgttttttttgggagggtggtttg 11912861  T
Q  366 aggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 465  Q
    |||||||| |||||| |  |||||||||||||||||||||||||  || ||||| || || |||||||||| ||||   ||||||||||||||| |||||    
T  11912860 aggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaacattgtt 11912761  T
Q  466 cttt 469  Q
    ||||    
T  11912760 cttt 11912757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 253 - 409
Target Start/End: Original strand, 37182558 - 37182712
Alignment:
Q  253 cttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnng 352  Q
    |||| |||||||||||||||||||||| ||  ||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||        |    
T  37182558 cttccccgatttgatttccttttcctcttctattgtcttgttttaggcctat--tagaattgggtcatcttgcttttgctgttaggtgggtgtttttttg 37182655  T
Q  353 ggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtat 409  Q
    |||||||| ||||||||||||||||||| |  ||||||||||||  ||||| |||||    
T  37182656 ggagggtgatttgaggttcctcatgtatacggtagtgattttcacttttgggtgtat 37182712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 357 - 544
Target Start/End: Original strand, 16096998 - 16097185
Alignment:
Q  357 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 456  Q
    ||||||||||||||||||||||||    |||| ||||||| |||||| ||||   || ||||| || || ||||||||||||||||||||||||||||||    
T  16096998 ggtggtttgaggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatag 16097097  T
Q  457 aacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacg 544  Q
    ||| ||||||||||        ||| |  ||||||||||||||||| ||||||||||||| ||| || |||||  |||| ||||||||    
T  16097098 aacattgttcttttaaacaaaatacatatttattttattacgggccacttttcacttacagagccgagcctccaaattcgtaggaacg 16097185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 543
Target Start/End: Complemental strand, 7742251 - 7742055
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaa-aaaattt 450  Q
    ||||| |||||||||||||||||||| || | |||||  |||||| ||||||||||| | || ||||| |  |||||||||||||||||||| ||||| |    
T  7742251 gggagagtggtttgaggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatat 7742152  T
Q  451 aaatagaacgttgttctttt----tnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaac 543  Q
    ||||||||| ||||||||||            |  ||| ||||||||| ||||||||||||||||||||| | | |||||||||||||| |||||||    
T  7742151 aaatagaacattgttcttttaaaaaaataatatgtgtttttattttatcacgggcctcttttcacttacagaaccgaacctccggattcgtaggaac 7742055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 423 - 551
Target Start/End: Complemental strand, 22727503 - 22727375
Alignment:
Q  423 tacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcag 522  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||        |||||| ||||||||||||  |||||||||||||||||  |  |    
T  22727503 tacatagtatttatcttttaaaaaatttaaatagaacattgttcttttaaaaaaaatacgtttttattttattacttgcctcttttcacttacagcgtcg 22727404  T
Q  523 aacctccggattcataggaacggccctga 551  Q
    | |||||| |||| |||||| ||||||||    
T  22727403 agcctccgaattcgtaggaatggccctga 22727375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 368 - 552
Target Start/End: Complemental strand, 27506841 - 27506657
Alignment:
Q  368 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 467  Q
    ||||||||||||| || |||| ||||| | |||||| |||| |||| ||||| || || || ||||||||||||||||||| |||||||| | ||| | |    
T  27506841 gttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgcttt 27506742  T
Q  468 ttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgat 552  Q
    ||||       |||||| | ||||||| || |||||||||||| |  || ||| || |||||| |||| |||| |||||||||||    
T  27506741 tttttaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctgat 27506657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 380
Target Start/End: Original strand, 10252326 - 10252421
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtg-ttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtat 380  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||| ||||||| ||         ||||||||||||||||||||||||||||    
T  10252326 gttgtcttgttttaggcctatta--gaattgggtcatcttgcttttggtgtttaggtgggtgttttttttggagggtggtttgaggttcctcatgtat 10252421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 479 - 544
Target Start/End: Original strand, 37182756 - 37182821
Alignment:
Q  479 tacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacg 544  Q
    |||||| ||||||||||||||| ||||||||||||||| ||| || ||||||||||| ||||||||    
T  37182756 tacgtttttattttattacgggtctcttttcacttacagagccgagcctccggattcttaggaacg 37182821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 6965007 - 6965110
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  6965007 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctc 6965106  T
Q  467 tttt 470  Q
    ||||    
T  6965107 tttt 6965110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 12337550 - 12337447
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| |||| ||||| |  || |||||||||||||||||||||| |||||||||| ||| ||    
T  12337550 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctc 12337451  T
Q  467 tttt 470  Q
    ||||    
T  12337450 tttt 12337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 469
Target Start/End: Complemental strand, 10762667 - 10762565
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| |||| |||||  | || || ||||||||||||||||||| |||||||||| ||| ||    
T  10762667 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatataaatagaacattgctc 10762568  T
Q  467 ttt 469  Q
    |||    
T  10762567 ttt 10762565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 465
Target Start/End: Original strand, 24410437 - 24410535
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgtt 465  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| |||||    
T  24410437 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 24410535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 535
Target Start/End: Original strand, 34694013 - 34694143
Alignment:
Q  405 tgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctc 504  Q
    |||| |||| ||||| || || |||||||||||||||||||||| |||||||||| ||| ||||||        |||||| | ||||||| |||||||||    
T  34694013 tgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcacgggcctc 34694112  T
Q  505 ttttcacttacaaagcagaacctccggattc 535  Q
    |||||| || || | | ||||||||| ||||    
T  34694113 ttttcatttccagatccgaacctccgaattc 34694143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 535
Target Start/End: Original strand, 34716425 - 34716555
Alignment:
Q  405 tgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctc 504  Q
    |||| |||| ||||| || || |||||||||||||||||||||| |||||||||| ||| ||||||        |||||| | ||||||| |||||||||    
T  34716425 tgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcacgggcctc 34716524  T
Q  505 ttttcacttacaaagcagaacctccggattc 535  Q
    |||||| || || | | ||||||||| ||||    
T  34716525 ttttcatttccagatccgaacctccgaattc 34716555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 9046029 - 9046133
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaatttaaatagaacgttgtt 465  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || |||||||||||| ||||||| |||||||||| |||||    
T  9046029 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaatagaacattgtt 9046128  T
Q  466 ctttt 470  Q
    |||||    
T  9046129 ctttt 9046133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 24035923 - 24035863
Alignment:
Q  84 ttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa 144  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||||| || |||||||||||||    
T  24035923 ttggggtgtgcaaggagctcaatggaaccgggcctccccaaggtgtgagcctaaaaaataa 24035863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 3155217 - 3155320
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || | | |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  3155217 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 3155316  T
Q  467 tttt 470  Q
    ||||    
T  3155317 tttt 3155320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 4505894 - 4505997
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||| | || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  4505894 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 4505993  T
Q  467 tttt 470  Q
    ||||    
T  4505994 tttt 4505997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 29939964 - 29939861
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || ||||||||||||| |||||||| |||||||||| ||| ||    
T  29939964 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatataaatagaacattgctc 29939865  T
Q  467 tttt 470  Q
    ||||    
T  29939864 tttt 29939861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 37622639 - 37622543
Alignment:
Q  158 tactactaagtactaccctactaaaaa---caaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttcc 245  Q
    |||||||||||||||||| ||||||||   |||| ||||||      ||||||||| |||||| ||||||||||| |||||||||||| ||||||||    
T  37622639 tactactaagtactaccccactaaaaaaaacaaattttcttattatctttctctctcataccacgcgttccatcatcatcactccatcagactttcc 37622543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 469
Target Start/End: Original strand, 42029208 - 42029247
Alignment:
Q  430 tatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  42029208 tatttatcttttaaaaaatttaaatagaacattgttcttt 42029247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 470
Target Start/End: Complemental strand, 28425827 - 28425709
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    ||||||| || |||||||||||||| |||    ||||||||||||  ||||| ||||   || ||||| |  || |||||||||||||||||||  ||||    
T  28425827 gggagggaggcttgaggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaattttta 28425728  T
Q  452 aatagaacgttgttctttt 470  Q
    |||||||| ||||||||||    
T  28425727 aatagaacattgttctttt 28425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 547
Target Start/End: Complemental strand, 11952624 - 11952511
Alignment:
Q  433 ttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccgga 532  Q
    ||||||||||||||||||||||||||| |||||| |||         | ||| ||||||||||||||| ||||||||||||||| | | || ||| | ||    
T  11952624 ttatcttttaaaaaatttaaatagaacattgttc-tttaaaaaaaaaatgtttttattttattacgggtctcttttcacttacagaaccgagccttcaga 11952526  T
Q  533 ttcataggaacggcc 547  Q
    ||| |||||||||||    
T  11952525 ttcgtaggaacggcc 11952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 12694798 - 12694847
Alignment:
Q  486 ttattttattacgggcctcttttcacttacaaagcagaacctccggattc 535  Q
    ||||||||||||||| ||||||||||||||| ||| || |||||||||||    
T  12694798 ttattttattacgggtctcttttcacttacagagccgagcctccggattc 12694847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 8327618 - 8327663
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  8327618 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 8327663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 26716128 - 26716232
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaatttaaatagaacgttgtt 465  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || |||||||||||| ||||||| |||||||||| ||| |    
T  26716128 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaatagaacattgct 26716227  T
Q  466 ctttt 470  Q
    |||||    
T  26716228 ctttt 26716232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 515
Target Start/End: Original strand, 10252476 - 10252564
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttac 515  Q
    |||||||||||||||||||||||||||| |||| || ||||||         || ||| ||||||||||||  ||||||||||||||||    
T  10252476 ttgtatttatcttttaaaaaatttaaattgaacatttttctttaaaaaaaaatatgtttttattttattacacgcctcttttcacttac 10252564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 40636198 - 40636241
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  40636198 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 40636241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 3953066 - 3953098
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  3953066 ttgtatttatcttttaaaaaatataaatagaac 3953098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 7162844 - 7162876
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  7162844 ttgtatttatcttttaaaaaatataaatagaac 7162876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Complemental strand, 8907121 - 8907089
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  8907121 ttgtatttatcttttaaaaaatataaatagaac 8907089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 10762715 - 10762670
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  10762715 ttttaggcctatta--gaattaggtcctcttgcatttggtgttaggtg 10762670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 12134019 - 12133959
Alignment:
Q  486 ttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggc 546  Q
    |||||||||||||| |||||||||||||||| | | || |||| |||||| |||| |||||    
T  12134019 ttattttattacggacctcttttcacttacagaaccgagcctctggattcgtaggtacggc 12133959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 27506890 - 27506845
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  27506890 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 27506845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 3e-68; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 194 - 544
Target Start/End: Complemental strand, 15167686 - 15167338
Alignment:
Q  194 tttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgt 293  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||       ||||||||||||||||||||||||||| || ||||||||||    
T  15167686 tttttctctctgataccacgcgttccatcaccatcactctatcagactttccttttcttcttctccgatttgatttccttttcctcttctgttgtcttgt 15167587  T
Q  294 tttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattt 393  Q
    |||||||||||  ||||||||||||||||| |||||||||||||||| ||        || |||||||||||||||||||||||||| | ||||||||||    
T  15167586 tttaggcctat--tagaattgggtcctcttacttttggtgttaggtgggt--ttttttggaagggtggtttgaggttcctcatgtatacgatagtgattt 15167491  T
Q  394 tcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt--tnnnnnnntacgttgttattt 491  Q
    |||  ||||| |||||| || |||||    || || |||||||||||||||||||||||||||||| ||||||||||          |||||| ||||||    
T  15167490 tcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacattgttcttttaaaaataaaatacgtttttattt 15167391  T
Q  492 tattacgggcctcttttcacttacaaagcagaacctccggattcataggaacg 544  Q
    |||||||| | | |||||||||||| |||||| ||| | ||||| ||||||||    
T  15167390 tattacggactttttttcacttacagagcagagccttcagattcgtaggaacg 15167338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 158 - 544
Target Start/End: Original strand, 15078548 - 15078936
Alignment:
Q  158 tactactaagtactaccctactaaaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnn 251  Q
    |||||||||||||||||| |||||| | |||||| |||      |||||||||||||||| |||||||||||||||||||| ||| |||||||           
T  15078548 tactactaagtactaccccactaaataaaaaattccttattatttttctctctgataccacgcgttccatcaccatcactctatcagactttcattttct 15078647  T
Q  252 ncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn 351  Q
     ||||||||||||||||||||||||||| || ||||||||||||||||||| |  ||||||||||||||||| |||||||||||||  ||| |           
T  15078648 tcttctccgatttgatttccttttcctcttctgttgtcttgttttaggcctgt--tagaattgggtcctcttacttttggtgttag--gtgaattttttt 15078743  T
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    || || ||||||||||||||||||||||| | |||||||||||||  ||||| |||||  || |||||  | || || ||||||||||||||||| ||||    
T  15078744 ggaagcgtggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaatttta 15078843  T
Q  452 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacg 544  Q
    |||||||| || |||||||        |||||| |||||||||||||| | |||||||||||||| |||||| ||| | ||||| ||||||||    
T  15078844 aatagaacattattcttttaaaaaaaatacgtttttattttattacggacttcttttcacttacagagcagagccttcagattcgtaggaacg 15078936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 77 - 469
Target Start/End: Complemental strand, 34049103 - 34048705
Alignment:
Q  77 ccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataatataggccggtaatactactaagtactaccct 176  Q
    |||||||||||||| ||||||||  | |||| ||||| | ||| | | |||||| || ||||||| | ||||| || |||  ||||||||||||||||||    
T  34049103 ccggaccttggggtgtgcaaggaacttaatgaaactgtgtctccctatggtatgagcttaaaaaa-attatagcccagtagaactactaagtactaccct 34049005  T
Q  177 actaaaaacaaaatttcttt-------ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgattt 269  Q
    ||||||||||||| ||| ||       ||||||| ||||||| |||||||||||||||||||||||||||||||||       |||| ||||||||||||    
T  34049004 actaaaaacaaaaattcattattctctttctctccgataccacgcgttccatcaccatcactccatcggactttccttttcttcttccccgatttgattt 34048905  T
Q  270 ccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggt 369  Q
    |||||||||| || ||||||||||  |||||||||  |||||| | | | | || |||||||||||||||| ||         |||||||||| |||||     
T  34048904 ccttttcctcttctgttgtcttgtgctaggcctat--tagaatcgagccattttacttttggtgttaggtgagtgttttttttggagggtggtatgagga 34048807  T
Q  370 tcctcatgtattcaatagtgattttcatctttggatgtatc--acacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 467  Q
    ||||||||||| || ||||||||||||||||||| ||||||  | | ||||| |  ||||||||||||||||||||||  |||||||||||| |||||||    
T  34048806 tcctcatgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgtttaaatagaacattgttct 34048707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 253 - 549
Target Start/End: Complemental strand, 41677387 - 41677092
Alignment:
Q  253 cttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnng 352  Q
    |||| |||||||||||||||||||||| |  |||||||||||||||||||||||  |||| ||||||||||||||||||||||||||| ||        |    
T  41677387 cttccccgatttgatttccttttcctcttatgttgtcttgttttaggcctatta--gaatcgggtcctcttgcttttggtgttaggtgggtgtttttttg 41677290  T
Q  353 ggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaattta 451  Q
    | |||||||||||||||||||||||||| || |||||||||||| |||| |||||||| || ||||| |  |  ||||||||||||||| ||||||||||    
T  41677289 g-agggtggtttgaggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaattta 41677191  T
Q  452 aatagaacgttgttctttt-tnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccct 549  Q
    |||||||| ||||||||||         |||||| |||||||||||  || ||||||||||| ||| ||| || |||||| |||| ||||||| |||||    
T  41677190 aatagaacattgttcttttaaaaaaaaatacgtttttattttattataggtctcttttcactcacagagccgagcctccgaattcgtaggaaccgccct 41677092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 285 - 549
Target Start/End: Complemental strand, 7944704 - 7944442
Alignment:
Q  285 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaa 384  Q
    |||||||||||||||||||||| |  |||| ||||||||||||||||||||||||| ||        |||| |||||||||||||||||||||||| |      
T  7944704 ttgtcttgttttaggcctattaaa--attgtgtcctcttgcttttggtgttaggtgggtgtttttttgggatggtggtttgaggttcctcatgtatacgg 7944607  T
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgtt 484  Q
    |||||||||||| |||||| ||||  ||| ||||| || || |||||||||| |||||||||||||||||| ||| ||||||||||        ||| ||    
T  7944606 tagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattgttcttttaaaaaaaatacatt 7944507  T
Q  485 gttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccct 549  Q
     |||||||||||||| |||||||||| ||||| |   || | ||| ||||| |||||||||||||    
T  7944506 tttattttattacggacctcttttcaattacagaatcgagcttcctgattcgtaggaacggccct 7944442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 166 - 516
Target Start/End: Original strand, 8646001 - 8646355
Alignment:
Q  166 agtactaccctactaaaaacaaaatttctt-tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgattt 264  Q
    |||||||||| |||||||| ||| | | || |||||||||||||||| ||||| |||||| |||||||||||  ||||||        |||| | |||||    
T  8646001 agtactaccccactaaaaaaaaattattttctttctctctgataccacgcgtttcatcactatcactccatcatactttcattttcttcttccctgattt 8646100  T
Q  265 gatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtg---- 360  Q
    ||||||||||||||| |  |||||||||||||||||||||  | ||||| |||| ||||||||||||||||||||||||        |||||||||        
T  8646101 gatttccttttcctcttatgttgtcttgttttaggcctat--tcgaattaggtcatcttgcttttggtgttaggtgtgtgtttttttgggagggtggttt 8646198  T
Q  361 --gtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 458  Q
      |||||||||| || |||||| |  ||||||||||||  ||||  |||||  || ||||| | ||| ||||||||||||||||||||||||||||||||    
T  8646199 gagtttgaggtttcttatgtatacggtagtgattttcacatttgcgtgtat-gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaa 8646297  T
Q  459 cgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttaca 516  Q
    | ||||||||||        |||||| ||||||||||| ||  ||||||| |||||||    
T  8646298 cattgttcttttaaaaaaattacgtttttattttattaaggatctcttttgacttaca 8646355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 470
Target Start/End: Original strand, 11290104 - 11290288
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 383  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||  |        |||| |||||||||||||| ||||||||| |     
T  11290104 gttgtcttgttttaggcctatta--gaattgggtcctgttgcttttggtattaggtggatgttttgttgggatggtggtttgaggttgctcatgtatacg 11290201  T
Q  384 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
     |||||||||||| |||||  ||||  ||| ||||| |  || ||||||||||||||||||||||||||||| ||| ||||||||||    
T  11290202 gtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattgttctttt 11290288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 354 - 552
Target Start/End: Complemental strand, 39332520 - 39332325
Alignment:
Q  354 gagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaa 453  Q
    ||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| | |  ||||| |  || ||||||||||||||| ||||| |||||    
T  39332520 gagggtggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaa 39332421  T
Q  454 tagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgat 552  Q
    |||||| |||||||||          || || ||||||||||||| | |||||||||| |||| | | || |||||| |||| ||||||||||||||||    
T  39332420 tagaacattgttcttt---aaaaaaaacttttttattttattacgagtctcttttcacctacagaaccgagcctccgaattcgtaggaacggccctgat 39332325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 41879182 - 41879285
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||| |||||||||||  |||| ||||||| ||||||||||| | || ||||| ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  41879182 ggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgttc 41879281  T
Q  467 tttt 470  Q
    ||||    
T  41879282 tttt 41879285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 516
Target Start/End: Complemental strand, 5973219 - 5973060
Alignment:
Q  357 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 456  Q
    |||||||||||||||||| ||||| |  || |||||||||||| ||| ||||  ||| ||||| |  || ||||||||||||||||||||||||||||||    
T  5973219 ggtggtttgaggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatag 5973120  T
Q  457 aacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttaca 516  Q
    ||| ||||||||||        ||| || |||||||||||| | |||||||||| |||||    
T  5973119 aacattgttcttttaaaacgaatacatttttattttattacagacctcttttcatttaca 5973060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 25561706 - 25561635
Alignment:
Q  267 tttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||  || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  25561706 tttccttttcctattctgttgtcttgttttaggcctatta--gaattgggtcctcttgcttttggtgttaggtg 25561635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 542
Target Start/End: Complemental strand, 30674485 - 30674330
Alignment:
Q  387 gtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgt 486  Q
    |||||||||| |||||  |||||| || ||||| |  || || |||||||||||||||| ||||||||||||| |||||||||         |||||| |    
T  30674485 gtgattttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattgttctttaaaaaaaaatacgtttt 30674386  T
Q  487 tattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaa 542  Q
    |||||||||||| ||||||||||||||||| ||| || ||||| ||||| ||||||    
T  30674385 tattttattacgagcctcttttcacttacagagccgagcctccagattcgtaggaa 30674330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 465
Target Start/End: Complemental strand, 23941208 - 23941095
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    ||||||||||||||||||||||| | |||   || ||||||||||||||||| |||||| |  ||||| |  || |||||||||||||||||||||||||    
T  23941208 gggagggtggtttgaggttcctcgtatatatgattgtgattttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaattta 23941109  T
Q  452 aatagaacgttgtt 465  Q
    |||| ||| |||||    
T  23941108 aataaaacattgtt 23941095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 447
Target Start/End: Original strand, 5942682 - 5942777
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaa 447  Q
    ||||||||||||||||||||||||||||| |  |||||||||||| |||||| |||| | |||||||| |  |  |||||||||||||||||||||    
T  5942682 gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 38009384 - 38009267
Alignment:
Q  219 catcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtc 318  Q
    ||||||||||||||||||  |||||||       ||| |||||||| |||||||||||||| || |||||||||||||||||||||  ||||| || ||     
T  38009384 catcaccatcactccatcatactttccttttcttcttgtccgatttaatttccttttcctcttctgttgtcttgttttaggcctat--tagaactgagtt 38009287  T
Q  319 ctcttgcttttggtgttagg 338  Q
    || |||||||||||||||||    
T  38009286 cttttgcttttggtgttagg 38009267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 2952323 - 2952219
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| |||||||||| ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  2952323 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctc 2952224  T
Q  467 ttttt 471  Q
    |||||    
T  2952223 ttttt 2952219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 352 - 459
Target Start/End: Original strand, 5721545 - 5721652
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||||||||||||||||||||| |||| |  ||||||||||||  ||||| |||| |    ||||| || || ||||||||||||||||||||| |||    
T  5721545 gggagggtggtttgaggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaatta 5721644  T
Q  452 aatagaac 459  Q
    ||||||||    
T  5721645 aatagaac 5721652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 30883330 - 30883433
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || ||||||||||||||||||||||||| |||||||||| ||| ||    
T  30883330 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatataaatagaacattgctc 30883429  T
Q  467 tttt 470  Q
    ||||    
T  30883430 tttt 30883433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 514
Target Start/End: Complemental strand, 34790024 - 34789817
Alignment:
Q  307 tagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatg 406  Q
    |||||||||||| |||| |||||||||||||||| ||         ||| ||||||||||  || ||||||||| |  |||||||||||| |||||| ||    
T  34790024 tagaattgggtcatcttacttttggtgttaggtgggtgtttttttaggatggtggtttgatatttctcatgtatacggtagtgattttcacctttgggtg 34789925  T
Q  407 tatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctctt 506  Q
    ||  ||| ||||| |  |  ||||||||||||||||| | ||||||||||||| | ||||||||        ||| || |||||||||||||| ||| ||    
T  34789924 tacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatcgttcttttaaaaaaaatacatttttattttattacggacctttt 34789825  T
Q  507 ttcactta 514  Q
    ||||||||    
T  34789824 ttcactta 34789817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 430 - 550
Target Start/End: Complemental strand, 38009191 - 38009070
Alignment:
Q  430 tatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntac-gttgttattttattacgggcctcttttcacttacaaagcagaacctc 528  Q
    ||||||||||||||||| |||||||||||| ||||||||||         |  ||| |||||||||||||| | |||||||| ||||| | | || ||||    
T  38009191 tatttatcttttaaaaattttaaatagaacattgttcttttaaaaaaaaaaaagtttttattttattacggacttcttttcagttacagaaccgagcctc 38009092  T
Q  529 cggattcataggaacggccctg 550  Q
    ||||||||||||||||||||||    
T  38009091 cggattcataggaacggccctg 38009070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 7944826 - 7944763
Alignment:
Q  78 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 141  Q
    ||||||||||||| |||||   ||||||||||||||||| || |||||||||||||||||||||    
T  7944826 cggaccttggggtgtgcaaaccgttcaatggaactgggcttccccaaggtatgggcctaaaaaa 7944763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 455
Target Start/End: Original strand, 8102906 - 8103001
Alignment:
Q  360 ggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 455  Q
    ||||||||||||||||||||| |  || ||||||||| |||| | |||| | || |||||  | || |||||||||||||||||||||||||||||    
T  8102906 ggtttgaggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaata 8103001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 45475818 - 45475921
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  45475818 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 45475917  T
Q  467 tttt 470  Q
    ||||    
T  45475918 tttt 45475921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 427 - 469
Target Start/End: Original strand, 9108554 - 9108596
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  9108554 ttgtatttatcttttaaaaaatttaaatagaacattgttcttt 9108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 25562076 - 25562010
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 141  Q
    |||||||||||||||| ||||||||| |||||||||   |||||| |||| ||||||||||||||||    
T  25562076 ggccggaccttggggtgtgcaaggagctcaatggaatcaggcctccccaaagtatgggcctaaaaaa 25562010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 457
Target Start/End: Original strand, 42600783 - 42600873
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaataga 457  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| |||| ||||| || || || ||||||||||||||||||| ||||||||    
T  42600783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 42600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 552
Target Start/End: Complemental strand, 23606731 - 23606546
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||| | |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  23606731 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 23606632  T
Q  467 tttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgat 552  Q
    ||||        |||||| | ||||||| || || ||||||||| |  || ||| || |||||| |||| |||| |||||||||||    
T  23606631 ttttaaaaaaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccctgat 23606546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 13534788 - 13534686
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  13534788 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcac-ttgtatttatcttttaaaaaatataaatagaacattgctc 13534690  T
Q  467 tttt 470  Q
    ||||    
T  13534689 tttt 13534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 13624328 - 13624226
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  13624328 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcac-ttgtatttatcttttaaaaaatataaatagaacattgctc 13624230  T
Q  467 tttt 470  Q
    ||||    
T  13624229 tttt 13624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 8102845 - 8102888
Alignment:
Q  295 ttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  8102845 ttaggcctatta--gaattgggtcctcttgcttttggtgttaggtg 8102888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 510
Target Start/End: Original strand, 10917392 - 10917535
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    ||||||||||||||    |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||| | |||||     
T  10917392 ggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 10917491  T
Q  467 tttttnnnnnnntacgttgttattttattacgggcctcttttca 510  Q
    |||||       |||||| | ||||||| || ||||||||||||    
T  10917492 tttttaaaaaaatacgttttgattttatcactggcctcttttca 10917535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 469
Target Start/End: Complemental strand, 23798363 - 23798261
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| |||||||  ||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  23798363 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 23798264  T
Q  467 ttt 469  Q
    |||    
T  23798263 ttt 23798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 469
Target Start/End: Complemental strand, 34868219 - 34868177
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  34868219 ttgtatttatcttttaaaaaatttaaatagaacattattcttt 34868177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 5860828 - 5860744
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| |||||    
T  5860828 tagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 5860744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 5973288 - 5973235
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 339  Q
    |||||||||||||||| ||||||  ||||||| || ||||||||||||||||||||    
T  5973288 gttgtcttgttttaggtctatta--gaattggatcatcttgcttttggtgttaggt 5973235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 23606779 - 23606734
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  23606779 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 23606734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 23798411 - 23798366
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  23798411 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 23798366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 30674559 - 30674507
Alignment:
Q  285 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 339  Q
    ||||||||||||||| |||||   ||||||||| |||||||||||||||||||||    
T  30674559 ttgtcttgttttaggtctattt--gaattgggttctcttgcttttggtgttaggt 30674507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 5973429 - 5973367
Alignment:
Q  70 agcaaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatggg 132  Q
    |||| |||| |||||||||||||||||   | |||||||| ||||||||| ||||||||||||    
T  5973429 agcagggccagaccttggggtctgcaaaccgctcaatggagctgggcctccccaaggtatggg 5973367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 38009545 - 38009479
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 141  Q
    |||||||||||||||| || || ||| |||||||| ||| ||||| ||||||||||  |||||||||    
T  38009545 ggccggaccttggggtgtgtaaagagctcaatggagctgagcctccccaaggtatgaacctaaaaaa 38009479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 3048619 - 3048530
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatag 456  Q
    |||||||| ||||| |  |||| |||||||||| | | |||| | || ||||| || || |||||||||||||||||||||| |||||||    
T  3048619 ggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 3048530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 8645917 - 8645961
Alignment:
Q  75 ggccggaccttggggtctgcaaggagttcaatggaactgggcctc 119  Q
    |||||||||||| ||| ||||||||| |||||||||||| |||||    
T  8645917 ggccggaccttgtggtgtgcaaggagctcaatggaactgagcctc 8645961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 10917344 - 10917389
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  10917344 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 10917389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Complemental strand, 37430200 - 37430168
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  37430200 ttgtatttatcttttaaaaaatataaatagaac 37430168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 42600735 - 42600780
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  42600735 ttttaggcctatta--gaattaggtcttcttgcttttggtgttaggtg 42600780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 45475770 - 45475815
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  45475770 ttttaggcctatta--gaattagttcctcttgcttttggtgttaggtg 45475815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 1e-67; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 191 - 551
Target Start/End: Complemental strand, 36118732 - 36118376
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| |||||||||||||||| || |||||| |||||||||||||||||||||||       |||| |||||||||||||||||||||| ||  ||||||    
T  36118732 ttctctttctctctgataccacgctttccattaccatcactccatcggactttccttttcttcttccccgatttgatttccttttcctcttctattgtct 36118633  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    | ||||||||||||  |||||||||||| ||||||||||||||||||||| |          | ||||||||| |||||| ||||||||| |  ||||||    
T  36118632 tcttttaggcctat--tagaattgggtcatcttgcttttggtgttaggtg-gatgtttttttgaagggtggttagaggttactcatgtatacggtagtga 36118536  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttatt 490  Q
    ||||||| ||||| ||||||||| ||||| |  || ||||||||||||||||||||||||||||||||| ||||||  |||       |||||| |||||    
T  36118535 ttttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc-atttaaaaaaatacgtttttatt 36118437  T
Q  491 ttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctga 551  Q
    |||||||| ||||||||||||||||||||| || | |||| |||| |||||||||||||||    
T  36118436 ttattacgagcctcttttcacttacaaagccgagcttccgaattcgtaggaacggccctga 36118376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 191 - 535
Target Start/End: Original strand, 52468118 - 52468459
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| ||||||||       |||| ||||||| |||||||||||||| |  |||||||    
T  52468118 ttctctttctctctgataccacgcgttccatcaccatcactccatcagactttcctttttttcttccccgatttcatttccttttcctcttatgttgtct 52468217  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    ||||||||||||||  |||||||| ||||||||| |||||| |||||||| ||        |||| ||||||||||||||||||||| || |  ||||||    
T  52468218 tgttttaggcctat--tagaattgagtcctcttgtttttggcgttaggtgggtgtctttttgggaaggtggtttgaggttcctcatgcatacggtagtga 52468315  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttatt 490  Q
    |||||| |||||||||||| ||| ||||| || || ||||||||||||||||||||||||||||||||| |||||| ||||       |||||| |||||    
T  52468316 ttttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc-ttttaaaaaaatacgtttttatt 52468414  T
Q  491 ttattacgggcctcttttcacttacaaagcagaacctccggattc 535  Q
    ||||||| | ||||||||||| |||| ||| || |||||| ||||    
T  52468415 ttattacagacctcttttcacctacagagccgagcctccgaattc 52468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 78 - 546
Target Start/End: Original strand, 27111747 - 27112214
Alignment:
Q  78 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactaccct 176  Q
    ||||||||| ||| ||||||||| |||||| ||| ||||||| |||||| ||||| |||||||| | | |||| || ||| ||||||||||||||||||     
T  27111747 cggaccttgaggtgtgcaaggagctcaatgcaaccgggcctccccaaggcatgggtctaaaaaaaagttatagcccagtagtactactaagtactacccc 27111846  T
Q  177 actaaaaacaaaatt--tctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttt 274  Q
    | |||||| |   ||  ||| ||| |||||||||||| || |||| ||||||||||||| || ||||||||       |||||| |||||||||||||||    
T  27111847 attaaaaaaatccttattctctttatctctgataccacgctttccttcaccatcactccgtcagactttccttttcttcttctctgatttgatttccttt 27111946  T
Q  275 tcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctc 374  Q
    ||||| |  ||| ||||||||||| |||||||  |||||| |||||||||||||| |||||||||| ||        |||||||||||||||||||||||    
T  27111947 tcctcttttgttttcttgttttag-cctatta--gaattgagtcctcttgctttttgtgttaggtgggtgtttttctgggagggtggtttgaggttcctc 27112043  T
Q  375 atgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnn 474  Q
    |||||| |  ||||||||||||  ||| | |||||| || ||||| |  || |||||||||||||||||||||||||||| |||| ||||||  |||       
T  27112044 atgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattgttc-gtttaaa 27112142  T
Q  475 nnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggc 546  Q
        |||  | ||||||||||||||| ||||||||||||||| | | || ||||| ||||  ||||||||||    
T  27112143 aaaatacaatcttattttattacgggtctcttttcacttacagaaccgagcctccagatttgtaggaacggc 27112214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 158 - 550
Target Start/End: Original strand, 40217020 - 40217419
Alignment:
Q  158 tactactaagtactaccctactaaaaacaaaa-tttctt------tttctctctgatacca--tgcgttccatcaccatcactccatcggactttccnnn 248  Q
    ||||||||| |||||||| ||||||||||||| ||||||      ||||||||| ||| ||  || |||||||||||||||||||||| ||||||||       
T  40217020 tactactaaatactaccccactaaaaacaaaaatttcttattctctttctctctaatatcacatgtgttccatcaccatcactccatcagactttccttt 40217119  T
Q  249 nnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggt--gtgtann 346  Q
        |||| ||||||||||||| |||||||| |  |||||||||||||||||||||  |||||||||||| | ||||||||||||||||||  || ||      
T  40217120 tcttcttccccgatttgatttctttttcctcttttgttgtcttgttttaggcctat--tagaattgggtcattttgcttttggtgttaggtgagtatatt 40217217  T
Q  347 nnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaa 446  Q
         || |||||||||||||||| |||||||||    || ||||||||||||||||||||||| || ||||| |  || || |||||||||||||||||    
T  40217218 tttttggaagggtggtttgaggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaa 40217317  T
Q  447 atttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggc 546  Q
    |||||||||| |   ||||||||          ||||| ||||||||||||| ||||||||||||||||||| | || |||| | |||| |||||| |||    
T  40217318 atttaaatagta--atgttctttaaaaaaaaaaacgtttttattttattacgagcctcttttcacttacaaaaccgagcctctgaattcgtaggaatggc 40217415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 80 - 459
Target Start/End: Original strand, 15734807 - 15735188
Alignment:
Q  80 gaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa---tataggccggtaatactactaagtactaccct 176  Q
    ||||||||| | ||||||||| | |||||||| || |||| ||||||||||||||| ||||| ||   ||||  |  ||| ||||||||||||||||||     
T  15734807 gaccttgggatgtgcaaggagctgaatggaaccggacctccccaaggtatgggcctcaaaaaaaaaattataaccaagtagtactactaagtactacccc 15734906  T
Q  177 actaaaaacaaaattt-------ctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgattt 269  Q
    |||||||||||| |||       |||||||||| |||||||| |||||||||||| |||||| ||| |||| |||        |||||||||||||||||    
T  15734907 actaaaaacaaattttttttattctttttctctttgataccacgcgttccatcactatcacttcattggacattcgttttcttcttctccgatttgattt 15735006  T
Q  270 ccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggt 369  Q
    |||||||||| || |||  |||||||||||||| |  |||||||||||| ||||||||||||||||||||| |          |||||||||||||| ||    
T  15735007 ccttttcctcttctgttcacttgttttaggcctgt--tagaattgggtcttcttgcttttggtgttaggtg-gatgtttttttggagggtggtttgaagt 15735103  T
Q  370 tcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    ||||||||||| |  || |||||||||| ||| | |||||     ||||| |     |||||||||||||||||||||||||||||||||    
T  15735104 tcctcatgtatacggtaatgattttcattttttggtgtat-----atatacgacgtcttgtatttatcttttaaaaaatttaaatagaac 15735188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 37747028 - 37746849
Alignment:
Q  163 ctaagtactaccctactaaaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttc 256  Q
    ||||||||||||| |||||||||||| ||||||      |||||||||||||||| || | ||||||||||||||||||||||||||||       ||||    
T  37747028 ctaagtactaccccactaaaaacaaa-tttcttattatctttctctctgataccacgcataccatcaccatcactccatcggactttccttttcttcttc 37746930  T
Q  257 tccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
     ||||||||||||| |||||||| || |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  37746929 -ccgatttgatttctttttcctcttctgttgtcttgttttaggcctat--tagaattgggtcatcttgcttttggtgttaggtg 37746849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 275 - 516
Target Start/End: Complemental strand, 39329583 - 39329344
Alignment:
Q  275 tcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctc 374  Q
    ||||| || |||||||||||||||||||||||  ||||| |||| ||||||||||||||||| ||| ||        ||||||||||||||| |||||||    
T  39329583 tcctcttctgttgtcttgttttaggcctatta--gaatttggtcttcttgcttttggtgttatgtgggtgtttttttgggagggtggtttgatgttcctc 39329486  T
Q  375 atgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnn 474  Q
     ||||| |  ||  ||||||||||||||| ||||||||| |||||    || ||||||||||||||||||||||||||| ||||| ||||||||||        
T  39329485 ctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattgttcttttaaaa 39329386  T
Q  475 nnnntacgttgttattttattacgggcctcttttcacttaca 516  Q
        || ||| |||||||||||||| ||||||||||||||||    
T  39329385 aaaatatgtttttattttattacggacctcttttcacttaca 39329344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 206 - 458
Target Start/End: Complemental strand, 2135578 - 2135331
Alignment:
Q  206 ataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctatt 305  Q
    |||||||| |||| |||| |||||||||||| ||||||||       |||| ||||||||||||| |||| ||| |  ||| ||||||||||||| ||||    
T  2135578 ataccatgtgttcaatcatcatcactccatcagactttccttttcttcttccccgatttgatttcatttttctcttttgttatcttgttttaggcttatt 2135479  T
Q  306 atagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggat 405  Q
    |  |||||||||||||||||||||||||||||||  ||         ||||    |||||||||||||||| ||| | |||||||| || | ||||||||    
T  2135478 a--gaattgggtcctcttgcttttggtgttaggtcagtgttttttttggag---tgtttgaggttcctcatatatacgatagtgatgtttacctttggat 2135384  T
Q  406 gtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 458  Q
    ||||| || ||||| |  || ||||||||||||||||||||||||||||||||    
T  2135383 gtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 2135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 191 - 470
Target Start/End: Original strand, 24396769 - 24397043
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| |||||||||||||| | ||||||||||||||||||||  ||  ||||| |       ||||  | ||||||||||||||||||| |  |||||||    
T  24396769 ttctctttctctctgatactaagcgttccatcaccatcactctctcatacttttcttttcttcttc--caatttgatttccttttcctcttttgttgtct 24396866  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    ||||||| || |||||  |||||| || ||||||||||||||||||| ||  |        || ||||| |||||||||||||||||||| | |||||||    
T  24396867 tgttttaagcatatta--gaattgagttctcttgcttttggtgttagatggatttttttttgg-agggtagtttgaggttcctcatgtatacgatagtga 24396963  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||| |||||  ||||||||| |||||  | || || |||||||||||||||||||||||||| ||  ||||||||||    
T  24396964 ttttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaataaaatattgttctttt 24397043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 186 - 467
Target Start/End: Original strand, 36178498 - 36178778
Alignment:
Q  186 aaaatttctttttctctctgataccatgcgttccatcaccatcactccatcggacttt-ccnnnnnnncttctccgatttgatttccttttcctcgtca- 283  Q
    |||| |||| |||||| || |||||| |||||||||||| |||||||||| ||  ||| ||       |||| | ||||||||||| |||||||| ||      
T  36178498 aaaaattctctttctccctaataccacgcgttccatcacaatcactccataggggttttccttttcttcttccctgatttgatttcattttcctcttccc 36178597  T
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 383  Q
    |||||||||||||||||| ||||  |||| ||||||||||||||||||||||||||| ||        |||||||||||||| | ||| ||||||||       
T  36178598 gttgtcttgttttaggcccatta--gaatcgggtcctcttgcttttggtgttaggtgagtgtttttttgggagggtggtttg-gattcttcatgtataag 36178694  T
Q  384 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 467  Q
     ||||||||||||  ||||| |||||| || ||||| |  || |||||||||||||||||| |||||||||||||| |||||||    
T  36178695 gtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattgttct 36178778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 260 - 470
Target Start/End: Complemental strand, 36363076 - 36362869
Alignment:
Q  260 gatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggt 359  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||  |||||||| ||| ||| |||||||||||| |||| ||        | ||||||    
T  36363076 gatttgatttcattttcctcttcagttgtcttgttttagacctat--tagaattgagtcatctcgcttttggtgttgggtgggtgctttgttgagagggt 36362979  T
Q  360 ggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| ||||||    ||||||||| ||  ||||| |||||  || ||||| || || ||||||||||||||||||||||||||| ||| |    
T  36362978 ggtttgaggttcct-atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaacagagc 36362880  T
Q  460 gttgttctttt 470  Q
     ||||||||||    
T  36362879 attgttctttt 36362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 355 - 546
Target Start/End: Complemental strand, 10042113 - 10041921
Alignment:
Q  355 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 454  Q
    |||||| ||||||||||||| ||||| |  ||||||||||||  ||| | ||||||||| | ||| || || |||||||||| |||| ||||||||||||    
T  10042113 agggtgatttgaggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaat 10042014  T
Q  455 agaacgttgttctttt-tnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggc 546  Q
    ||||| ||||||||||         |||| | |||||||| ||||| |||||||||||||||| | | |||||||| ||||| ||||||||||    
T  10042013 agaacattgttcttttaaaaaaaaatacgcttttattttactacggacctcttttcacttacagaactgaacctcccgattcgtaggaacggc 10041921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 427 - 550
Target Start/End: Original strand, 24614019 - 24614143
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnn--tacgttgttattttattacgggcctcttttcacttacaaagcagaa 524  Q
    ||||||||||||||||||||||||||||||||| |||||||||           ||| || ||||||||||||||||||||||||||||||| ||| |||    
T  24614019 ttgtatttatcttttaaaaaatttaaatagaacattgttctttaaaaaaaaaaatacatt-ttattttattacgggcctcttttcacttacagagctgaa 24614117  T
Q  525 cctccggattcataggaacggccctg 550  Q
    ||||| ||||| || |||||||||||    
T  24614118 cctccagattcgtaagaacggccctg 24614143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 307 - 550
Target Start/End: Complemental strand, 51692078 - 51691838
Alignment:
Q  307 tagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttca--tctttgga 404  Q
    ||||||||| || |||||||||| |||||||||| ||         ||||||||||||||||||| || |||||    ||||||||||||  | ||| |     
T  51692078 tagaattggatcatcttgcttttagtgttaggtgagtgtttttttcggagggtggtttgaggttcatcgtgtatatggtagtgattttcactttttttgg 51691979  T
Q  405 tgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctc 504  Q
    |||| | || ||||| || || ||||||||||||||||||||||||||||||||| ||| ||||||        ||| |     |||||||||| |||||    
T  51691978 tgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctcttttaaaaaaaatacat-----ttttattacgagcctc 51691884  T
Q  505 ttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    ||||||||| || ||| || ||||||||||| ||||||||||||||    
T  51691883 ttttcacttgcagagccgagcctccggattcgtaggaacggccctg 51691838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 2790842 - 2790739
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| ||||| || ||||||||||||||||||| |||||||||| ||||||    
T  2790842 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattgttc 2790743  T
Q  467 tttt 470  Q
    ||||    
T  2790742 tttt 2790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 549
Target Start/End: Complemental strand, 39655334 - 39655172
Alignment:
Q  388 tgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttttt-nnnnnnntacgttgt 486  Q
    ||||||||| |||||| |||| | || ||||  || || ||||||||||||||||||||||||||||||||| |||||||||||         ||||| |    
T  39655334 tgattttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttctttttaaaaatagaacgtttt 39655235  T
Q  487 tattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccct 549  Q
    |||||||||||| |||||||||||| |||| ||  || ||||| ||||  |||||||| ||||    
T  39655234 tattttattacgagcctcttttcacctacagagtcgagcctccagatttgtaggaacgaccct 39655172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 352 - 465
Target Start/End: Original strand, 45656166 - 45656279
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||||||||||||||||| |||||||| |  | ||||||||||  ||||||| |||| || ||||| |  || ||| |||||||||||||||||||||    
T  45656166 gggagggtggtttgaggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaattta 45656265  T
Q  452 aatagaacgttgtt 465  Q
    |||| ||| |||||    
T  45656266 aataaaacattgtt 45656279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 4168002 - 4167911
Alignment:
Q  357 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaat 448  Q
    |||| |||||||||||||||||||    |||||||||||| |||||| |||||| || ||||| || || ||||||||||||||||||||||    
T  4168002 ggtgatttgaggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaat 4167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 357 - 459
Target Start/End: Complemental strand, 37745021 - 37744918
Alignment:
Q  357 ggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt-aaaaaatttaaata 455  Q
    ||||||||||||||||||| |||| |  |||||||||||| ||||||||||||| || ||||  |  || || |||||||||||| ||||||||||||||    
T  37745021 ggtggtttgaggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaata 37744922  T
Q  456 gaac 459  Q
    ||||    
T  37744921 gaac 37744918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 54780783 - 54780886
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  54780783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 54780882  T
Q  467 tttt 470  Q
    ||||    
T  54780883 tttt 54780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 428 - 550
Target Start/End: Complemental strand, 30507162 - 30507037
Alignment:
Q  428 tgtatttatcttttaaaaaatttaaatagaacgttgttctttt---tnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaa 524  Q
    |||||||||||||||||||||||||||||||| ||||||||||           ||| || ||||||||||| ||| |||||||||||||||||   ||     
T  30507162 tgtatttatcttttaaaaaatttaaatagaacattgttcttttaaaaaaaaaaatacatttttattttattatgggtctcttttcacttacaaaatcgag 30507063  T
Q  525 cctccggattcataggaacggccctg 550  Q
    ||||||||||| |||||||| |||||    
T  30507062 cctccggattcgtaggaacgaccctg 30507037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 242
Target Start/End: Complemental strand, 4168268 - 4168097
Alignment:
Q  70 agcaaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataa--tataggccggtaatactactaag 167  Q
    |||||||||| ||||| |||| |||||||||||||||| ||  ||| |||  |||||||||||||||||||| ||  ||||  || | | ||||||||||    
T  4168268 agcaaggccgaaccttagggtgtgcaaggagttcaatgaaatcgggtctcttcaaggtatgggcctaaaaaaaaaattatatcccagcagtactactaag 4168169  T
Q  168 tactaccctactaaaaacaaaatttctttttctctctgataccatgcgttccatcaccatcactccatcggactt 242  Q
    |||||||| | |||||| |||| | | | ||||||    |  || |||||||||||||||||||||||| |||||    
T  4168168 tactaccccattaaaaaaaaaaatccatattctct---ttctcacgcgttccatcaccatcactccatctgactt 4168097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 4167911 - 4167843
Alignment:
Q  479 tacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggcc 547  Q
    |||||| |||||||||||||||||||||||||||||||||   || ||||||||||| || ||||||||    
T  4167911 tacgtttttattttattacgggcctcttttcacttacaaaatcgagcctccggattcgtacgaacggcc 4167843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 43455632 - 43455529
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  43455632 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 43455533  T
Q  467 tttt 470  Q
    ||||    
T  43455532 tttt 43455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 47128993 - 47129096
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||| | || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||||||    
T  47128993 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgttc 47129092  T
Q  467 tttt 470  Q
    ||||    
T  47129093 tttt 47129096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 486 - 548
Target Start/End: Complemental strand, 11906884 - 11906822
Alignment:
Q  486 ttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccc 548  Q
    ||||||||||||||||||||||||||||| | ||| || |||||| |||| ||||||||||||    
T  11906884 ttattttattacgggcctcttttcacttatatagccgagcctccgaattcgtaggaacggccc 11906822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 550
Target Start/End: Original strand, 34027585 - 34027768
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||||| ||| |     
T  34027585 ggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctt 34027684  T
Q  467 tttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    |||||       |||||| | ||||||| || |||||||||||| |  || ||| || |||||| |||| |||| |||||||||    
T  34027685 tttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 34027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 469
Target Start/End: Complemental strand, 38209692 - 38209590
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  38209692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 38209593  T
Q  467 ttt 469  Q
    |||    
T  38209592 ttt 38209590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 30507254 - 30507200
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||||||||| |  |||||| |||||||||||||||||||||||||    
T  30507254 gttgtcttgttttaggcctataa--gaattgagtcctcttgcttttggtgttaggtg 30507200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 19498510 - 19498611
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| || |||| ||||||| |||||| |||| | ||  |||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  19498510 ggttcctcatgtatacagtagtcattttcacctttggctgtaccgca--tatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 19498607  T
Q  467 tttt 470  Q
    ||||    
T  19498608 tttt 19498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 37777324 - 37777232
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| ||||||||||    
T  37777324 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 37777232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 54083343 - 54083239
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||| |||||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||| | |||||     
T  54083343 ggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttt 54083244  T
Q  467 ttttt 471  Q
    |||||    
T  54083243 ttttt 54083239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 5893137 - 5893201
Alignment:
Q  486 ttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    |||||||||||||| |||||||||||||||| ||| || |||||  |||  ||||||||||||||    
T  5893137 ttattttattacggacctcttttcacttacagagccgagcctccaaatttgtaggaacggccctg 5893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 11906960 - 11906904
Alignment:
Q  399 tttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 455  Q
    |||||||||| |||| ||||| ||||| ||||||||||||||  |||||||||||||    
T  11906960 tttggatgtaccacatatatacggtaccttgtatttatctttataaaaatttaaata 11906904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 16882544 - 16882499
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  16882544 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 16882499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 19498462 - 19498507
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  19498462 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 19498507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 32128542 - 32128587
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  32128542 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 32128587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 32915391 - 32915483
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  || | ||||| | || ||| |||| |||| ||||| || || |||||||||||||||||||||| ||||||||||    
T  32915391 ggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 32915483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 34027537 - 34027582
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  34027537 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 34027582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 40089474 - 40089519
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  40089474 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 40089519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 9578705 - 9578662
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  9578705 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 10978966 - 10979009
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  10978966 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 10979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 34768675 - 34768572
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  || | ||||||| || ||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  34768675 ggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 34768576  T
Q  467 tttt 470  Q
    ||||    
T  34768575 tttt 34768572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 446
Target Start/End: Original strand, 40089522 - 40089601
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaa 446  Q
    |||||||||||||| |  |||| ||||||| ||||||||||| | || ||||| || || || |||||||||||||||||    
T  40089522 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaa 40089601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 48209306 - 48209349
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  48209306 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 48209349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 339
Target Start/End: Complemental strand, 54083391 - 54083347
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggt 339  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||    
T  54083391 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggt 54083347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 39329679 - 39329625
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttcc 245  Q
    |||| |||||||||||||||| |||||| |||| |||||||| ||| ||||||||    
T  39329679 ttctctttctctctgataccacgcgttctatcatcatcactcaatcagactttcc 39329625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 458
Target Start/End: Complemental strand, 5128945 - 5128852
Alignment:
Q  365 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 458  Q
    |||||||||||||||| |  |||| ||||||| || ||| || |   || ||||| || || |||||||||||||||||||||| |||||||||    
T  5128945 gaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 5128852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 22077110 - 22077164
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||| ||||||| |||||||  |||||| |||||| ||||||||||||||||||    
T  22077110 gttgtctggttttagacctatta--gaattgagtcctcatgcttttggtgttaggtg 22077164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 32128608 - 32128693
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||||| ||| ||||||    
T  32128608 tagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctctttt 32128693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 1105598 - 1105630
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  1105598 ttgtatttatcttttaaaaaatataaatagaac 1105630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Complemental strand, 10428238 - 10428206
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  10428238 ttgtatttatcttttaaaaaatataaatagaac 10428206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 13460273 - 13460305
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  13460273 ttgtatttatcttttaaaaaatataaatagaac 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 16844979 - 16845024
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  16844979 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 16845024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 470
Target Start/End: Complemental strand, 16922367 - 16922327
Alignment:
Q  430 tatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    ||||||||||||||||||| |||||||||| ||| ||||||    
T  16922367 tatttatcttttaaaaaatataaatagaacattgctctttt 16922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 24969395 - 24969440
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  24969395 ttttaggcctatta--gaattagatcctcttgcttttggtgttaggtg 24969440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 37514725 - 37514757
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  37514725 ttgtatttatcttttaaaaaatataaatagaac 37514757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 38352404 - 38352359
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  38352404 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 38352359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 50677288 - 50677231
Alignment:
Q  191 ttctttttctctctgataccat----gcgttccatcaccatcactccatcggactttc 244  Q
    |||| |||||||||||||||||    || ||||||||||||||||||||||| |||||    
T  50677288 ttctctttctctctgataccatccacgcattccatcaccatcactccatcggtctttc 50677231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 158 - 544
Target Start/End: Original strand, 1144 - 1532
Alignment:
Q  158 tactactaagtactaccctactaaaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnn 251  Q
    |||||||||||||||||| |||||| | |||||| |||      |||||||||||||||| |||||||||||||||||||| ||| |||||||           
T  1144 tactactaagtactaccccactaaataaaaaattccttattatttttctctctgataccacgcgttccatcaccatcactctatcagactttcattttct 1243  T
Q  252 ncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnn 351  Q
     ||||||||||||||||||||||||||| || ||||||||||||||||||| |  ||||||||||||||||| |||||||||||||  ||| |           
T  1244 tcttctccgatttgatttccttttcctcttctgttgtcttgttttaggcctgt--tagaattgggtcctcttacttttggtgttag--gtgaattttttt 1339  T
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    || || ||||||||||||||||||||||| | |||||||||||||  ||||| |||||  || |||||  | || || ||||||||||||||||| ||||    
T  1340 ggaagcgtggtttgaggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaatttta 1439  T
Q  452 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacg 544  Q
    |||||||| || |||||||        |||||| |||||||||||||| | |||||||||||||| |||||| ||| | ||||| ||||||||    
T  1440 aatagaacattattcttttaaaaaaaatacgtttttattttattacggacttcttttcacttacagagcagagccttcagattcgtaggaacg 1532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 2e-63; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 82 - 544
Target Start/End: Original strand, 26279254 - 26279722
Alignment:
Q  82 ccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactaccctacta 180  Q
    |||| |||| ||||||||| ||| |||| ||||||||| ||| |||||| | |||||||| ||| ||||  | ||| ||||||||| |||||| | ||||    
T  26279254 ccttagggtgtgcaaggagctcactggagctgggcctccccagggtatgagtctaaaaaaaaattatagctcagtagtactactaaatactactccacta 26279353  T
Q  181 aaaacaaaatttctt------tttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttt 274  Q
    || |||||||| |||      ||||||||||||||||  ||||||||||||||||||||| |  |||||||       | || ||||||||||||| |||    
T  26279354 aacacaaaattccttattctctttctctctgataccacacgttccatcaccatcactccaacaaactttccttttcttcatccccgatttgatttcattt 26279453  T
Q  275 tcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctc 374  Q
    ||||| ||  |||||||||||||||||||||| |  |||||||| | ||||||||||||||||||| ||        |||||||||||||||||||||||    
T  26279454 tcctcttctattgtcttgttttaggcctattaaa--attgggtcatgttgcttttggtgttaggtgggtgtttttttgggagggtggtttgaggttcctc 26279551  T
Q  375 atgtat--tcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttn 472  Q
    ||||||  |   ||||||||||||||||||| |||||  || ||||| |  || || |||||||||||||||||||||||||||||| |||||| ||||     
T  26279552 atgtataatgtgtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacattgttc-tttta 26279650  T
Q  473 nnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacg 544  Q
          |||||| |||||||| || || |||||||||||||||||||  ||||||||  |||||||||||||    
T  26279651 aaaaaatacgtttttattttactatggacctcttttcacttacaaagttgaacctccaaattcataggaacg 26279722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 253 - 513
Target Start/End: Complemental strand, 28689574 - 28689317
Alignment:
Q  253 cttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnng 352  Q
    |||| ||||||||||||| || ||||| || |||||||||||||| ||||||  ||||||||| || ||||||||||||||||||||| ||        |    
T  28689574 cttccccgatttgatttctttctcctcttctgttgtcttgttttaagcctat--tagaattggatcatcttgcttttggtgttaggtgggt-gttttttg 28689478  T
Q  353 ggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaa 452  Q
    ||||||| ||||||| || ||||||||| |   ||||||||||| |||||||| |||| || ||||| || || |||||||||||||||  |||||||||    
T  28689477 ggagggtagtttgagatttctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaa 28689378  T
Q  453 atagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcactt 513  Q
    ||||||| || || ||||        ||  || ||||||||||||| ||||||||||||||    
T  28689377 atagaacattctttttttaaaaaaaatatctttttattttattacgagcctcttttcactt 28689317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 551
Target Start/End: Original strand, 49393014 - 49393276
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 383  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||||||||||||| |||       |||| |||| |||||||||| |||||||| |     
T  49393014 gttgtcttgttttaggcctatta--gaattaggtcctcttacttttggtgttaggtgagtatttttttgggatggtgatttgaggttc-tcatgtatacg 49393110  T
Q  384 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgt 483  Q
     |||| ||||| | |||||| |||| |||| ||||| |   | ||||||||||||||||||||||||||| ||||| |||||||||         ||| |    
T  49393111 gtagtaatttttacctttgggtgta-cacatatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattgttctttaaaaaaaaatacat 49393209  T
Q  484 tgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctga 551  Q
    | ||||||||||||| | || ||||||||||| |||| || ||||||||||| ||||||||| |||||    
T  49393210 ttttattttattacgagtcttttttcacttac-aagccgagcctccggattcgtaggaacggtcctga 49393276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 197 - 519
Target Start/End: Original strand, 52374500 - 52374813
Alignment:
Q  197 ttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgtttt 296  Q
    |||| |||||||||| |||||||||||||||||||  ||| ||||||||       |||| || ||||||||||||||||       |||||||||||||    
T  52374500 ttctttctgataccacgcgttccatcaccatcactttatcagactttccttttcttcttccccaatttgatttccttttct------gttgtcttgtttt 52374593  T
Q  297 aggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttca 396  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| ||        |||| |||||| |||||||| |||||||| |  |||||||||||     
T  52374594 aggcctatta--gaattgagtcctcttgcttttggtgttaggtgggt-gttttttggga-ggtggtatgaggttcttcatgtatacggtagtgattttct 52374689  T
Q  397 tctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt-tnnnnnnntacgttgttattttatt 495  Q
     |||| |||||||| ||  |||| |  ||||||||||||| |   |||||||||||||||||| ||||||||||         |||||| ||||||||||    
T  52374690 cctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacattgttcttttaaaaaaaaatacgtttttattttatt 52374789  T
Q  496 acgggcctcttttcacttacaaag 519  Q
    ||||   |||||||||||||||||    
T  52374790 acggatttcttttcacttacaaag 52374813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 206 - 337
Target Start/End: Original strand, 42453257 - 42453386
Alignment:
Q  206 ataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctatt 305  Q
    |||||| |||||||||||||||||||| ||| ||||||||       |||| ||||||||||||||||||| || || |||||||||||||||||||||     
T  42453257 ataccacgcgttccatcaccatcactctatcagactttccttttcttcttccccgatttgatttccttttcttcttctgttgtcttgttttaggcctat- 42453355  T
Q  306 atagaattgggtcctcttgcttttggtgttag 337  Q
     |||||||| |||||||| |||||||||||||    
T  42453356 -tagaattgagtcctcttacttttggtgttag 42453386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 470
Target Start/End: Original strand, 8420249 - 8420433
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 383  Q
    |||||||| |||||||| |||||  ||||||||| |||||||||||||||||||||| ||        || | |||||||||||||||||| | ||| |     
T  8420249 gttgtcttattttaggcatatta--gaattgggttctcttgcttttggtgttaggtgggtgtttttttggaatggtggtttgaggttcctcgtatatacg 8420346  T
Q  384 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
      |||||||||||  ||||| ||||  ||| ||||| || || ||||||||||||||||||||||||||||||||| || |||||||    
T  8420347 gcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattattctttt 8420433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 470
Target Start/End: Complemental strand, 54575010 - 54574826
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 383  Q
    ||||| ||||||||||| |||||  |||||| ||| |||| |||||| ||||||||| ||        ||||||| |||||||||||||||||||||       
T  54575010 gttgttttgttttaggcatatta--gaattgagtcatcttacttttgttgttaggtgggtgtttttttgggagggcggtttgaggttcctcatgtatatg 54574913  T
Q  384 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
     |||||||||| |  ||||| |||| | || ||||| ||||| |||||||||| |||| ||||||||||||||||| ||||||||||    
T  54574912 gtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattgttctttt 54574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 25855411 - 25855574
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||||||||||||||||| || ||||| |  |||||||||||| |||||| || |  ||| ||||| |  || ||||||| |||||||||||||||||    
T  25855411 gggagggtggtttgaggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaattta 25855509  T
Q  452 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttaca 516  Q
    |||||||| |||||||||         ||| || |||||||||||||||||| |||||| |||||    
T  25855510 aatagaacattgttctttaaaaaaacatacatttttattttattacgggccttttttcatttaca 25855574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 469
Target Start/End: Original strand, 789860 - 790042
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 383  Q
    ||||||||||||||||||| |   |||||||||||||||| ||||| ||||||| || ||        |||  ||||||||||||||||||||||||       
T  789860 gttgtcttgttttaggccttt---agaattgggtcctcttactttttgtgttagatgagtgtttttttgggttggtggtttgaggttcctcatgtatatg 789956  T
Q  384 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
     | |||||||| | |||||| ||||  ||| ||||| |  || ||||||||||  ||||||||||||||||||||  |||||||||    
T  789957 gtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaagattgttcttt 790042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 424 - 546
Target Start/End: Complemental strand, 23641363 - 23641240
Alignment:
Q  424 acattgtatttatcttttaaaaaatttaaatagaacgttgttctttt-tnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcag 522  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||         |||||| ||||||||| ||||| |||||||||| |||| | | |    
T  23641363 acattgtatttatcttttaaaaaatataaatagaatgttgttcttttaaaaaaaaatacgtttttattttatcacgggtctcttttcacctacagaaccg 23641264  T
Q  523 aacctccggattcataggaacggc 546  Q
    | ||||| ||||| ||||||||||    
T  23641263 agcctccagattcgtaggaacggc 23641240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 436
Target Start/End: Original strand, 29598031 - 29598179
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattca 383  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||||||||||| |          ||||| ||||||||| |||||||||||| |     
T  29598031 gttgtcttgttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg-gatgtttttttggaggctggtttgagattcctcatgtatacg 29598127  T
Q  384 atagtgattttcatctttggatgtatcacacatataaggtacattgtatttat 436  Q
     |||||| |||||||||||  ||||||||| ||||| || || ||||||||||    
T  29598128 gtagtga-tttcatctttgagtgtatcacatatatacggaaccttgtatttat 29598179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 47467688 - 47467780
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| || ||| |||||| || ||||| || || |||||||||||||||||||||| ||||||||||    
T  47467688 ggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 47467780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 21582775 - 21582878
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||| ||| ||||||    
T  21582775 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataaaacattgttc 21582874  T
Q  467 tttt 470  Q
    ||||    
T  21582875 tttt 21582878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 53506986 - 53506883
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||| ||||||||| |  |||| ||||||| |||||| |||| | || ||||| ||||| || ||||||||||||||||||| |||||||||| |||||     
T  53506986 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattgttt 53506887  T
Q  467 tttt 470  Q
    ||||    
T  53506886 tttt 53506883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 54619305 - 54619202
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  54619305 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 54619206  T
Q  467 tttt 470  Q
    ||||    
T  54619205 tttt 54619202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 390 - 549
Target Start/End: Complemental strand, 3953975 - 3953816
Alignment:
Q  390 attttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttat 489  Q
    ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||||||||||        ||| || | ||    
T  3953975 attttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgttcttttaaaaaaaatacattttaat 3953876  T
Q  490 tttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccct 549  Q
    ||||| || |||||||||||| || || ||| ||||||||| ||||  ||| ||||||||    
T  3953875 tttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 37168372 - 37168474
Alignment:
Q  368 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 467  Q
    ||||||||||||| |  |||| ||||||| |||||| | || |||| ||||| || || || ||||||||||||||||||| |||||||||| ||||| |    
T  37168372 gttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtttt 37168471  T
Q  468 ttt 470  Q
    |||    
T  37168472 ttt 37168474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 471
Target Start/End: Complemental strand, 54407242 - 54407156
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttttt 471  Q
    |||| ||||||| ||||||||||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||||| |||||    
T  54407242 tagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtttttttt 54407156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 470
Target Start/End: Complemental strand, 38681193 - 38681092
Alignment:
Q  369 ttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctt 468  Q
    |||||||||||| |  |||| ||||||| || |||||||| | || | ||| || || |||||||||||||||||||||| |||||||||| ||| ||||    
T  38681193 ttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 38681094  T
Q  469 tt 470  Q
    ||    
T  38681093 tt 38681092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 469
Target Start/End: Complemental strand, 32319263 - 32319155
Alignment:
Q  361 gtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacg 460  Q
    |||||||||||||| | |||   ||||| ||||||| |||||| |||| | || |||||    || |||||||||||||||||||||||||||||||||     
T  32319263 gtttgaggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaaca 32319164  T
Q  461 ttgttcttt 469  Q
    || ||||||    
T  32319163 ttattcttt 32319155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 34290738 - 34290635
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||| ||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| |||||     
T  34290738 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgttt 34290639  T
Q  467 tttt 470  Q
    ||||    
T  34290638 tttt 34290635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 42453468 - 42453511
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  42453468 ttgtatttatcttttaaaaaatttaaattgaacattgttctttt 42453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 43207339 - 43207237
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| ||||| ||||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  43207339 ggttcctcatgtatacggtagtcattttcacctttg-atgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 43207241  T
Q  467 tttt 470  Q
    ||||    
T  43207240 tttt 43207237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 36179683 - 36179629
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||| |||||||||  ||||||| |||||||||||||||||| |||||    
T  36179683 gttgtcttgttttcggcctatta--gaattggatcctcttgcttttggtgtcaggtg 36179629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 8073440 - 8073348
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| |||||||  ||||| |||| | || ||||| |  || |||||||||||||||||||||| ||||||||||    
T  8073440 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 8073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 43207387 - 43207342
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  43207387 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 43207342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 44708481 - 44708573
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| |  | ||||| || || || ||||||||||||||||||| ||||||||||    
T  44708481 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatataaatagaac 44708573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 53149416 - 53149324
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||| |||| ||  |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  53149416 ggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 53149324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 53507034 - 53506989
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  53507034 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 53506989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 54407307 - 54407262
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  54407307 ttttaggcctatta--gaattaggtcctcttgcttttggtgttaggtg 54407262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 458
Target Start/End: Complemental strand, 9878789 - 9878698
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 458  Q
    ||||||| |||||| | ||||| ||||||| |||||| |||| | || |||||  | || || ||||||||||||||||||| |||||||||    
T  9878789 ggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatataaatagaa 9878698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 18372547 - 18372590
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  18372547 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 18372590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 36716067 - 36716024
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaacgttgttctttt 470  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  36716067 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 36716024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 457
Target Start/End: Complemental strand, 50939335 - 50939245
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaataga 457  Q
    |||||||||||||| |  |||| ||||| | |||||| |||| || | ||||| || || || ||||||||||||||||||| ||||||||    
T  50939335 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatataaataga 50939245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 52973385 - 52973435
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttg 402  Q
    ||||||||||||||| |||| ||||| || || ||||||||||||||||||    
T  52973385 gggagggtggtttgaagttcatcatgcatacagtagtgattttcatctttg 52973435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 23641525 - 23641460
Alignment:
Q  76 gccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 141  Q
    ||||||| ||||||| |||||   | |||||||||| ||||||| ||||||||||||||| |||||    
T  23641525 gccggactttggggtgtgcaaaccgctcaatggaaccgggcctccccaaggtatgggcctcaaaaa 23641460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 36179540 - 36179475
Alignment:
Q  486 ttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctga 551  Q
    |||||||||||||||||||||||||||||     |  | ||||||||||| |||||||||||||||    
T  36179540 ttattttattacgggcctcttttcacttatgggaccaagcctccggattcgtaggaacggccctga 36179475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Complemental strand, 27078611 - 27078579
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  27078611 ttgtatttatcttttaaaaaatataaatagaac 27078579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Complemental strand, 27084408 - 27084376
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  27084408 ttgtatttatcttttaaaaaatataaatagaac 27084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 558
Target Start/End: Original strand, 29598175 - 29598243
Alignment:
Q  490 tttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgatgttgat 558  Q
    |||||||||| |||||||||||||||||||  || |||||| ||| ||| ||| | | |||||||||||    
T  29598175 tttattacggacctcttttcacttacaaagtcgagcctccgaatttataagaatgactctgatgttgat 29598243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 34290786 - 34290741
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||||||||| |||||||||||||||    
T  34290786 ttttaggcctatta--gaattaggtcctcttgtttttggtgttaggtg 34290741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 37168323 - 37168368
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||||  ||| ||||||||||||||| ||||||||||    
T  37168323 ttttaggcctattata--attaggtcctcttgcttttagtgttaggtg 37168368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 42098865 - 42098897
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||| ||||||||||    
T  42098865 ttgtatttatcttttaaaaaatataaatagaac 42098897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 44708433 - 44708478
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  44708433 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 44708478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 2e-57; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 78 - 546
Target Start/End: Complemental strand, 2477976 - 2477508
Alignment:
Q  78 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaataat-ataggccggtaatactactaagtactaccct 176  Q
    ||||||||| ||| ||||||||| |||||| ||| ||||||| |||||| ||||| |||||||| | | |||| || ||| ||||||||||||||||||     
T  2477976 cggaccttgaggtgtgcaaggagctcaatgcaaccgggcctccccaaggcatgggtctaaaaaaaagttatagcccagtagtactactaagtactacccc 2477877  T
Q  177 actaaaaacaaaat-----ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttcc 271  Q
    | ||||||  ||||     |||| ||| |||||||||||| || |||| ||||||||||||| || ||||||||       |||||| ||||||||||||    
T  2477876 attaaaaa--aaatccttattctctttatctctgataccacgctttccttcaccatcactccgtcagactttccttttcttcttctctgatttgatttcc 2477779  T
Q  272 ttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttc 371  Q
    |||||||| |  ||| ||||||||||| |||||||  |||||| |||||||||||||| |||||||||| ||        ||||||||||||||||||||    
T  2477778 ttttcctcttttgttttcttgttttag-cctatta--gaattgagtcctcttgctttttgtgttaggtgggtgtttttctgggagggtggtttgaggttc 2477682  T
Q  372 ctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttttt 471  Q
    ||||||||| |  ||||||||||||  ||| | |||||| || ||||| |  || |||||||||||||||||||||||||||| |||| ||||||  |||    
T  2477681 ctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattgttc-gttt 2477583  T
Q  472 nnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggc 546  Q
           |||  | ||||||||||||||| ||||||||||||||| | | || ||||| ||||  ||||||||||    
T  2477582 aaaaaaatacaatcttattttattacgggtctcttttcacttacagaaccgagcctccagatttgtaggaacggc 2477508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 191 - 552
Target Start/End: Original strand, 20611620 - 20611977
Alignment:
Q  191 ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtct 290  Q
    |||| ||||||| ||||| || |||||||||||||||  ||||||| ||||||||       |||| ||||||||||||| |||||||| |  |||||||    
T  20611620 ttctctttctctatgatatcaagcgttccatcaccattgctccatcagactttccttttcttcttccccgatttgatttctttttcctcttttgttgtct 20611719  T
Q  291 tgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtga 390  Q
    ||||||||||||||  |||||||||||| | || |||||||||||||||| ||        |||||||| |||||||||||||||||||| |  ||||||    
T  20611720 tgttttaggcctat--tagaattgggtcattttacttttggtgttaggtgagtgtttttttgggagggtagtttgaggttcctcatgtatacggtagtga 20611817  T
Q  391 ttttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttctttttnnnnnnntacgttgttatt 490  Q
    |||||| |||||||||| ||  | ||||| |  || ||||||||||| |||||||||||||| |||||| |  || | ||         ||||| |||||    
T  20611818 ttttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacat--ttatcttgaaaaaaaaacgtttttatt 20611915  T
Q  491 ttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgat 552  Q
    || ||| ||||||||||||||||||| ||| || |||||| |||| |||||||| |||||||    
T  20611916 tttttatgggcctcttttcacttacagagccgagcctccgaattcgtaggaacgaccctgat 20611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 356 - 458
Target Start/End: Complemental strand, 21183788 - 21183686
Alignment:
Q  356 gggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaata 455  Q
    ||||||||||||||||||||||||| |  |||||||||||| |||||| |||| |||| ||||| | ||| |||||||||||||||||||||||||||||    
T  21183788 gggtggtttgaggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaata 21183689  T
Q  456 gaa 458  Q
    |||    
T  21183688 gaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 466
Target Start/End: Original strand, 6159430 - 6159541
Alignment:
Q  355 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 454  Q
    ||||||||||||||||||| || ||| |  ||||||||| || ||||| ||||| | || ||||| |  ||||||||||||||||||||||||| |||||    
T  6159430 agggtggtttgaggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaat 6159529  T
Q  455 agaacgttgttc 466  Q
    ||||| ||||||    
T  6159530 agaacattgttc 6159541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 469
Target Start/End: Original strand, 30121784 - 30121868
Alignment:
Q  385 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    |||||||||||| ||||||||||||| || ||||| |  || |||||||||| |||||||||||||||||| ||| |||||||||    
T  30121784 tagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacattgttcttt 30121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 28075787 - 28075879
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| |||||| |||||| || ||||| || || || ||||||||||||||||||| ||||||||||    
T  28075787 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 28075879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 13727501 - 13727398
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  13727501 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 13727402  T
Q  467 tttt 470  Q
    ||||    
T  13727401 tttt 13727398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 20711822 - 20711719
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||| ||| ||    
T  20711822 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctc 20711723  T
Q  467 tttt 470  Q
    ||||    
T  20711722 tttt 20711719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 21479498 - 21479601
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| ||    
T  21479498 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 21479597  T
Q  467 tttt 470  Q
    ||||    
T  21479598 tttt 21479601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 24711101 - 24711009
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| ||||||| || ||  |||| |||| ||||| || || |||||||||||||||||||||| ||||||||||    
T  24711101 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 24711009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 552
Target Start/End: Complemental strand, 27788790 - 27788606
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| || || || ||||||||||||||||||| |||||||||  ||| ||    
T  27788790 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaaaattgctc 27788691  T
Q  467 tttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgat 552  Q
     ||||       |||||| | ||||||| || |||||||||||| |  || ||| || |||||| |||| |||| |||||||||||    
T  27788690 -ttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctgat 27788606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 33774121 - 33774213
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| |||||||  ||||| |||| | || ||||| || || |||||||||||||||||||||| ||||||||||    
T  33774121 ggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 33774213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 446
Target Start/End: Original strand, 4036895 - 4037031
Alignment:
Q  310 aattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtat 409  Q
    ||||||||| ||||||||||||||||||||| ||         |||||||||||||| ||||||||| ||| |  ||||||| || | |||||| ||||     
T  4036895 aattgggtcatcttgcttttggtgttaggtgagtgttttttttggagggtggtttgaagttcctcatatatacggtagtgatctttacctttgggtgtac 4036994  T
Q  410 cacacatataaggtacattgtatttatcttttaaaaa 446  Q
    || | ||||| || || |||||||||||| |||||||    
T  4036995 catatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 469
Target Start/End: Complemental strand, 1155947 - 1155849
Alignment:
Q  371 cctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttcttt 469  Q
    |||||||||| |  |||| ||||||| || |||||||| | || ||||| |  || |||||||||||||||||||||| |||||||||| ||| |||||    
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 21280550 - 21280652
Alignment:
Q  368 gttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttct 467  Q
    ||||||||||||| |  |||| ||||| | || ||| |||| | || ||||| || || |||||||||||||||||||||| |||||||||| ||| |||    
T  21280550 gttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 21280649  T
Q  468 ttt 470  Q
    |||    
T  21280650 ttt 21280652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 470
Target Start/End: Original strand, 34397859 - 34397964
Alignment:
Q  365 gaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgt 464  Q
    |||||||||||||| | | ||||| ||||| | |||| | |||| | || ||||| |  || |||||||||||||||||||||| |||||||||| |||     
T  34397859 gaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatataaatagaacattgc 34397958  T
Q  465 tctttt 470  Q
    ||||||    
T  34397959 tctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 20611510 - 20611582
Alignment:
Q  78 cggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcct-aaaaaataatatag 149  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||| | |||||||||| || |||||| |||||||    
T  20611510 cggaccttggggtgtgcaaagagctcaatggagctgggcctccctaaggtatgggtctaaaaaaaaaatatag 20611582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 336
Target Start/End: Original strand, 30121698 - 30121747
Alignment:
Q  285 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgtta 336  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||||||||||    
T  30121698 ttgtcttgttttaggtctatta--gaatcgggtcctcttgcttttggtgtta 30121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 30832626 - 30832534
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    ||||||||||| || |  |||| |||||||||| ||| |||| |||| ||||| || |  |||||||||| ||||||||||| ||||||||||    
T  30832626 ggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgtaaatagaac 30832534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 19737794 - 19737691
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| || | | |||| | || ||||| || || |||||||||||||| ||||||| |||||||||| ||| ||    
T  19737794 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatataaatagaacattgctc 19737695  T
Q  467 tttt 470  Q
    ||||    
T  19737694 tttt 19737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 4036783 - 4036896
Alignment:
Q  69 gagcaaggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcct-aaaaaataatataggccggtaatactactaag 167  Q
    ||||| || ||||||||||||| |||||   | ||||||||  |||||||| |||| ||||| |||| |||||| | ||||| || ||| ||||||||||    
T  4036783 gagcagggtcggaccttggggtgtgcaaaacgctcaatggagttgggcctccccaatgtatgagcctcaaaaaaaattatagcccagtagtactactaag 4036882  T
Q  168 tactaccctactaa 181  Q
    ||||| || |||||    
T  4036883 tactatcccactaa 4036896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 17353922 - 17353955
Alignment:
Q  307 tagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||| ||||||||||||||||||||||||||    
T  17353922 tagaattaggtcctcttgcttttggtgttaggtg 17353955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 17353958 - 17354050
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    ||||| |||||||| | ||||| |||||||  ||||| |||| | || ||||| |  || || ||||||||||||||||||| ||||||||||    
T  17353958 ggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 17354050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 19987117 - 19987162
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  19987117 ttttaggcctatta--gaattaggtcatcttgcttttggtgttaggtg 19987162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 105; Significance: 4e-52; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 161 - 552
Target Start/End: Complemental strand, 231167 - 230778
Alignment:
Q  161 tactaagtactaccctactaaaaacaa-aat-ttctttttctctctgataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctc 258  Q
    ||||||||||||||| | |||||| || ||| |||| |||||||||||||||||| ||||||||| |||||||||||| ||||||||       |||| |    
T  231167 tactaagtactaccccattaaaaaaaataatattctctttctctctgataccatgtgttccatcaacatcactccatcagactttccttttcttcttccc 231068  T
Q  259 cgatttgatttccttttcctcgtcagttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggaggg 358  Q
     |||||||||||| ||||||| |  ||| | |||||||||||||||  |||||| ||||||||||||||||||||||||||| ||        |||||||    
T  231067 tgatttgatttccctttcctcttttgttatattgttttaggcctat--tagaatcgggtcctcttgcttttggtgttaggtgggtggttttttgggaggg 230970  T
Q  359 tggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaa 458  Q
    |||||||| |||||||||||||    |||||||||||| |||||| | |||| || |||||    || ||  ||||||||||||| ||||||||||||||    
T  230969 tggtttgaagttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaa 230870  T
Q  459 cgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctgat 552  Q
    | ||||||||||        ||| |  || ||||||||||||||||||||| |||||| | | || | ||||||||| ||||||||||||||||    
T  230869 cattgttcttttaaaaaatatacat--tttttttattacgggcctcttttcccttacagatccgagcttccggattcgtaggaacggccctgat 230778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 232611 - 232544
Alignment:
Q  74 aggccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 141  Q
    |||||||||| |||  | |||||||||||||||||||| ||||||| | |||||||| | ||||||||    
T  232611 aggccggaccctggcatgtgcaaggagttcaatggaaccgggcctccctaaggtatgagtctaaaaaa 232544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 206 - 464
Target Start/End: Complemental strand, 173771 - 173515
Alignment:
Q  206 ataccatgcgttccatcaccatcactccatcggactttccnnnnnnncttctccgatttgatttccttttcctcgtcagttgtcttgttttaggcctatt 305  Q
    |||||| ||| | ||||||||||| |||||| ||||||||       |||| | |||||||||||||||||||| || ||||||| ||||||||||||||    
T  173771 ataccacgcgcttcatcaccatcattccatcagactttccttttcttcttccctgatttgatttccttttcctcttctgttgtctagttttaggcctatt 173672  T
Q  306 atagaattgggtcctcttgcttttggtgttaggtgtgtannnnnnngggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggat 405  Q
    |  |||||| | ||||||||||||||||||| ||  ||        |||||| ||||||||||||||||| |||| |  |||||||||| | |||||| |    
T  173671 a--gaattgagacctcttgcttttggtgttaagtaggtgtttttatgggaggatggtttgaggttcctcacgtatacggtagtgatttttacctttgggt 173574  T
Q  406 gtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgt 464  Q
    ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  173573 gtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacattgt 173515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 550
Target Start/End: Original strand, 40003 - 40272
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg--tgtannnnnnngggagggtggtttgaggttcctcatgtatt 381  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||        |||| |||||||||||||| |||||||||     
T  40003 gttgtcttgttttaggcctatta--gaattgggtcctcttgctttttgtgttaggtggatgtttttttttgggacggtggtttgaggttgctcatgtata 40100  T
Q  382 caatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt--aaaaaatttaaatagaacgttgttcttttt-nnnnnnn 478  Q
    | || |||||||||| ||| || ||||  ||| | ||| || || |||||||||||||||  |||||| ||||||||||| |||||||||||            
T  40101 cgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgttctttttaaaaaaaa 40200  T
Q  479 tacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    ||| || |||||||||||||  |||||||||||||||| |||||||||||| |||||| |||| || |||||    
T  40201 tacatttttattttattacgaacctcttttcacttacagagcagaacctccagattcacaggatcgaccctg 40272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 550
Target Start/End: Original strand, 138063 - 138332
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg--tgtannnnnnngggagggtggtttgaggttcctcatgtatt 381  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||        |||| |||||||||||||| |||||||||     
T  138063 gttgtcttgttttaggcctatta--gaattgggtcctcttgctttttgtgttaggtggatgtttttttttgggacggtggtttgaggttgctcatgtata 138160  T
Q  382 caatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatctttt--aaaaaatttaaatagaacgttgttcttttt-nnnnnnn 478  Q
    | || |||||||||| ||| || ||||  ||| | ||| || || |||||||||||||||  |||||| ||||||||||| |||||||||||            
T  138161 cgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgttctttttaaaaaaaa 138260  T
Q  479 tacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggattcataggaacggccctg 550  Q
    ||| || |||||||||||||  |||||||||||||||| |||||||||||| |||||| |||| || |||||    
T  138261 tacatttttattttattacgaacctcttttcacttacagagcagaacctccagattcacaggatcgaccctg 138332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 375 - 193
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||||||||||||||||| |||||||| |  ||||||||||||  ||||| |||| | || ||||| |  || |||||||||||||||||||||||||    
T  375 gggagggtggtttgaggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaattta 276  T
Q  452 aatagaacgttgttctttttnnnnnnntacgttgttattttattacgggcctcttttcacttacaaagcagaacctccggatt 534  Q
    |||||||| ||||||||||        ||| || ||||||||||| |||||||| ||||||| || ||| || |||| |||||    
T  275 aatagaacattgttcttttaataaaaatacatttttattttattatgggcctctattcacttgcagagccgagcctctggatt 193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 501 - 432
Alignment:
Q  72 caaggccggacctt-ggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcctaaaaaa 141  Q
    |||||||||||||| ||||| ||||||||||||||| ||||| |||||  ||||||||||| ||| |||||    
T  501 caaggccggacctttggggtgtgcaaggagttcaatagaact-ggccttgccaaggtatggacctcaaaaa 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 38798 - 38907
Alignment:
Q  76 gccggaccttggggtctgcaaggagttcaatggaactgggcctcaccaaggtatgggcct-aaaaaataatataggccggtaatactactaagtactacc 174  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||  ||||||||||||||| |||||| | ||||| || ||| |||||||||||  ||||    
T  38798 gccggactttggggtgtgcaaggagttcaatggaactgggtcttcccaaggtatgggcctcaaaaaaaattatagtccagtagtactactaagtgttacc 38897  T
Q  175 ctactaaaaa 184  Q
    ||||||||||    
T  38898 ctactaaaaa 38907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 355 - 465
Target Start/End: Original strand, 38914 - 39024
Alignment:
Q  355 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaat 454  Q
    |||||||||||||||||||||| ||| |  ||||||||||||  ||||  |||||| || ||||| |  || ||||||||||||||||||||||||||||    
T  38914 agggtggtttgaggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaat 39013  T
Q  455 agaacgttgtt 465  Q
    ||||| |||||    
T  39014 agaacattgtt 39024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 469
Target Start/End: Complemental strand, 206597 - 206489
Alignment:
Q  361 gtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacg 460  Q
    |||||||||||||||||||| |  |||||||||||| | |||| |||| | || ||||| |  || |||||||||||||||| ||||||||||||||||     
T  206597 gtttgaggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaaca 206498  T
Q  461 ttgttcttt 469  Q
    || ||||||    
T  206497 ttcttcttt 206489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 469
Target Start/End: Complemental strand, 24110 - 23993
Alignment:
Q  352 gggagggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaattta 451  Q
    |||||||||||||||| ||||| ||| || |  || |||||||||  ||||| |||| | || ||||| |  || |||||||||||||||||||||||||    
T  24110 gggagggtggtttgagattccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaattta 24011  T
Q  452 aatagaacgttgttcttt 469  Q
    |||||||  |||||||||    
T  24010 aatagaatattgttcttt 23993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 106539 - 106642
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacgttgttc 466  Q
    |||||||||||||| |  |||| ||||||| |||||| |||| | || ||||| |  || || ||||||||||||||||||| |||||||||| ||||||    
T  106539 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgttc 106638  T
Q  467 tttt 470  Q
    ||||    
T  106639 tttt 106642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 106491 - 106536
Alignment:
Q  293 ttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||  || || ||||||||||||||||||||||||||    
T  106491 ttttaggcctatta--gatttaggtcctcttgcttttggtgttaggtg 106536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 408
Target Start/End: Original strand, 16016 - 16069
Alignment:
Q  355 agggtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgta 408  Q
    |||||||||||||||| ||||||||| |  ||||||||||||||||||||||||    
T  16016 agggtggtttgaggtttctcatgtatacggtagtgattttcatctttggatgta 16069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 16126 - 16158
Alignment:
Q  427 ttgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||||||||||||||||||||||    
T  16126 ttgtatttatcttttaaaaaatttaaatagaac 16158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 15948 - 16003
Alignment:
Q  284 gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtg 340  Q
    ||||||||||||||||||||||||| | |||| || ||||||||||| || ||||||    
T  15948 gttgtcttgttttaggcctattata-atttggatcatcttgcttttgatgctaggtg 16003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 1344 - 1436
Alignment:
Q  367 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||||||||||| |  |||| |||||||||| ||| |||| | || ||||| || |  |||||||||||||||||||||| ||||||||||    
T  1344 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatataaatagaac 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 350319 - 350269
Alignment:
Q  358 gtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgta 408  Q
    |||||||||||| ||||||||||||| ||| |||||||| |||||||||||    
T  350319 gtggtttgaggtacctcatgtattcagtagcgattttcacctttggatgta 350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 443
Target Start/End: Complemental strand, 351445 - 351360
Alignment:
Q  358 gtggtttgaggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaa 443  Q
    |||||||||||| |||| |||||||| ||| |||||||| |||||| ||||  ||| ||||| |  || |||||||||||||||||    
T  351445 gtggtttgaggtacctcgtgtattcagtagcgattttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 459
Target Start/End: Original strand, 183102 - 183153
Alignment:
Q  408 atcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaac 459  Q
    |||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  183102 atcacatatatacgatactttgtatttatcttttaaaaaatataaatagaac 183153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University