View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12085_high_20 (Length: 219)

Name: NF12085_high_20
Description: NF12085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12085_high_20
NF12085_high_20
[»] chr2 (9 HSPs)
chr2 (49-116)||(40997274-40997341)
chr2 (161-219)||(40997171-40997229)
chr2 (2-54)||(18976455-18976507)
chr2 (2-49)||(40997363-40997410)
chr2 (2-54)||(35171945-35171997)
chr2 (2-54)||(11941210-11941262)
chr2 (2-54)||(18692105-18692157)
chr2 (2-54)||(44929846-44929898)
chr2 (2-54)||(44946053-44946105)
[»] chr4 (10 HSPs)
chr4 (2-54)||(35229313-35229365)
chr4 (2-54)||(44343659-44343711)
chr4 (2-54)||(45787704-45787756)
chr4 (2-54)||(51535766-51535818)
chr4 (2-54)||(52494633-52494685)
chr4 (4-54)||(37302634-37302684)
chr4 (2-54)||(23639769-23639821)
chr4 (2-54)||(23645427-23645479)
chr4 (2-54)||(34844758-34844810)
chr4 (2-54)||(40058852-40058904)
[»] chr7 (9 HSPs)
chr7 (2-54)||(11997998-11998050)
chr7 (2-54)||(17196950-17197002)
chr7 (2-40)||(39145666-39145704)
chr7 (2-54)||(2751420-2751472)
chr7 (2-54)||(7275426-7275478)
chr7 (2-54)||(16374143-16374195)
chr7 (2-54)||(22120037-22120089)
chr7 (2-54)||(31712902-31712954)
chr7 (2-54)||(40542910-40542962)
[»] chr6 (7 HSPs)
chr6 (2-54)||(21148511-21148563)
chr6 (2-56)||(5360069-5360123)
chr6 (2-54)||(3222636-3222688)
chr6 (2-42)||(11449016-11449056)
chr6 (2-54)||(15360098-15360150)
chr6 (2-54)||(34147491-34147543)
chr6 (2-54)||(34160107-34160159)
[»] chr5 (14 HSPs)
chr5 (2-54)||(7085626-7085678)
chr5 (2-49)||(11464913-11464960)
chr5 (2-54)||(8484661-8484713)
chr5 (2-54)||(11926501-11926553)
chr5 (2-54)||(13038455-13038507)
chr5 (2-54)||(18207352-18207404)
chr5 (2-54)||(19456211-19456263)
chr5 (2-54)||(22693080-22693132)
chr5 (2-54)||(27498731-27498783)
chr5 (2-54)||(34310287-34310339)
chr5 (2-54)||(35425158-35425210)
chr5 (2-54)||(37495199-37495251)
chr5 (2-54)||(38684352-38684404)
chr5 (2-54)||(41351104-41351156)
[»] chr3 (15 HSPs)
chr3 (2-54)||(33398468-33398520)
chr3 (2-54)||(40133449-40133501)
chr3 (3-54)||(8456150-8456201)
chr3 (2-54)||(8097279-8097331)
chr3 (2-54)||(10083819-10083871)
chr3 (2-54)||(10190742-10190794)
chr3 (2-54)||(24407406-24407458)
chr3 (2-54)||(26174258-26174310)
chr3 (2-54)||(30257769-30257821)
chr3 (2-54)||(32151569-32151621)
chr3 (2-42)||(33698718-33698758)
chr3 (2-54)||(49258262-49258314)
chr3 (2-54)||(52821636-52821688)
chr3 (2-54)||(53424177-53424229)
chr3 (2-54)||(53848434-53848486)
[»] chr1 (9 HSPs)
chr1 (2-54)||(24674538-24674590)
chr1 (3-54)||(23041668-23041719)
chr1 (13-50)||(18647009-18647046)
chr1 (2-54)||(4621237-4621289)
chr1 (2-42)||(7766739-7766779)
chr1 (2-54)||(8254752-8254804)
chr1 (2-54)||(15059402-15059454)
chr1 (2-54)||(16539752-16539804)
chr1 (2-54)||(24122168-24122220)
[»] chr8 (11 HSPs)
chr8 (4-54)||(42328155-42328205)
chr8 (13-54)||(264400-264441)
chr8 (13-54)||(651480-651521)
chr8 (13-54)||(837215-837256)
chr8 (2-54)||(2639411-2639463)
chr8 (2-54)||(4718794-4718846)
chr8 (2-54)||(8765526-8765578)
chr8 (2-54)||(20306057-20306109)
chr8 (2-54)||(21092690-21092742)
chr8 (2-54)||(21603379-21603431)
chr8 (2-54)||(34237655-34237707)
[»] scaffold0623 (1 HSPs)
scaffold0623 (2-34)||(1076-1108)
[»] scaffold0576 (1 HSPs)
scaffold0576 (2-54)||(5082-5134)
[»] scaffold0366 (1 HSPs)
scaffold0366 (2-34)||(9319-9351)


Alignment Details
Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 40997341 - 40997274
Alignment:
Q  49 aattttgattatcttgaatgataaataaaggggtgcgggaaagggttaggaggaagatacggtaagcc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40997341 aattttgattatcttgaatgataaataaaggggtgcgggaaagggttaggaggaagatacggtaagcc 40997274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 40997229 - 40997171
Alignment:
Q  161 aaaattaataggaagtatcaaaatgaataaagaaggtggcaataagactgtccttagtt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40997229 aaaattaataggaagtatcaaaatgaataaagaaggtggcaataagactgtccttagtt 40997171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 18976507 - 18976455
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||||||||    
T  18976507 ggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 18976455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 40997410 - 40997363
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccga 49  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||    
T  40997410 ggtgggattggtcccaacgaattagtcgattctcgaatcgggtaccga 40997363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 35171945 - 35171997
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| ||||||| |||||| ||||    
T  35171945 ggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 11941262 - 11941210
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  11941262 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 18692105 - 18692157
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  18692105 ggtgggattggtcccctcgtattagtcgattcttggatcggataccgagtttt 18692157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 44929898 - 44929846
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||| ||||||||||||||| | ||||| |||||| ||||    
T  44929898 ggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 44946105 - 44946053
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  44946105 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 35229313 - 35229365
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||||||||    
T  35229313 ggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 35229365  T

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Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 44343659 - 44343711
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||||||||||||||||| ||||||| |||||| ||||    
T  44343659 ggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagtttt 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 45787756 - 45787704
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  45787756 ggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 51535766 - 51535818
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| ||||||||||||||||||||||||   ||||| |||||||||||    
T  51535766 ggtgggattggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 52494633 - 52494685
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  52494633 ggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 37302634 - 37302684
Alignment:
Q  4 tgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||| |||||| ||| ||||||||||||| ||||||| |||||||||||    
T  37302634 tgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 23639769 - 23639821
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  23639769 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 23645427 - 23645479
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  23645427 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 34844810 - 34844758
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  34844810 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 40058904 - 40058852
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  40058904 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 11997998 - 11998050
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  11997998 ggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 17197002 - 17196950
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  17197002 ggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 39145704 - 39145666
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatc 40  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  39145704 ggtgggattggtcccctcgaattagtcgattcttgaatc 39145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 2751420 - 2751472
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  2751420 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 7275426 - 7275478
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  7275426 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 16374143 - 16374195
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  16374143 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 16374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 22120037 - 22120089
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  22120037 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 31712954 - 31712902
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  31712954 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 40542962 - 40542910
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  40542962 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40542910  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 21148563 - 21148511
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| ||||||| |||||| ||||    
T  21148563 ggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 21148511  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 5360123 - 5360069
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaattttga 56  Q
    |||||||| ||||||||||||||||||||||||   ||||| |||||| ||||||    
T  5360123 ggtgggattggtcccctcgaattagtcgattcttagatcggataccgagttttga 5360069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 3222688 - 3222636
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  3222688 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 11449016 - 11449056
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgg 42  Q
    |||||||| |||||||||| ||||||||||||| |||||||    
T  11449016 ggtgggattggtcccctcggattagtcgattcttgaatcgg 11449056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 15360150 - 15360098
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  15360150 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 34147491 - 34147543
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  34147491 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 34160107 - 34160159
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  34160107 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 7085678 - 7085626
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| ||||||| |||||| ||||    
T  7085678 ggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 11464960 - 11464913
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccga 49  Q
    |||||||| |||||||||||||||||||||||| | ||||| ||||||    
T  11464960 ggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8484713 - 8484661
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  8484713 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 11926553 - 11926501
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  11926553 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 13038507 - 13038455
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| | |||||||||||||||||||||| | ||||| ||| |||||||    
T  13038507 ggtgggattgatcccctcgaattagtcgattcttggatcggatactgaatttt 13038455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 18207352 - 18207404
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  18207352 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 19456263 - 19456211
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  19456263 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 22693080 - 22693132
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  22693080 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 27498783 - 27498731
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  27498783 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 34310287 - 34310339
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| ||||||||||||||| |||||||| | ||||| |||||| ||||    
T  34310287 ggtgggattggtcccctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 35425158 - 35425210
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| ||||| |||| ||||||||||||| | ||||| |||||||||||    
T  35425158 ggtgggattggtcctctcggattagtcgattcttggatcggataccgaatttt 35425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 37495199 - 37495251
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  37495199 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 37495251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 38684352 - 38684404
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  38684352 ggtgggattggtcccctcggattagtcgattcttggatcggataccgattttt 38684404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 41351156 - 41351104
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  41351156 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 41351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 33398520 - 33398468
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| ||| |||||||||||||||||||| | ||||| |||||||||||    
T  33398520 ggtgggattggttccctcgaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 40133501 - 40133449
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  40133501 ggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 8456201 - 8456150
Alignment:
Q  3 gtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    ||||||| |||||||||| ||||||||||||| ||||||| |||||| ||||    
T  8456201 gtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8097331 - 8097279
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  8097331 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 10083871 - 10083819
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  10083871 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 10190794 - 10190742
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  10190794 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 24407406 - 24407458
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  24407406 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 26174258 - 26174310
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  26174258 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 30257769 - 30257821
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    ||||| || |||||||||| ||||||||||||| | ||||| |||||||||||    
T  30257769 ggtggcattggtcccctcggattagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 32151569 - 32151621
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||| ||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  32151569 ggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 33698758 - 33698718
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgg 42  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  33698758 ggtgggattggtcccctcaaattagtcgattctcggatcgg 33698718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 49258314 - 49258262
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  49258314 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 52821688 - 52821636
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  52821688 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 53424229 - 53424177
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  53424229 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 53848486 - 53848434
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  53848486 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 24674538 - 24674590
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||||||||    
T  24674538 ggtgggattggtcccctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 23041668 - 23041719
Alignment:
Q  3 gtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    ||||||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  23041668 gtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 18647009 - 18647046
Alignment:
Q  13 tcccctcgaattagtcgattctcgaatcgggtaccgaa 50  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  18647009 tcccctcgaattagtcgattcttgaatcggataccgaa 18647046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 4621289 - 4621237
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  4621289 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 7766779 - 7766739
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgg 42  Q
    |||||||| |||||||||| ||||||||||||| |||||||    
T  7766779 ggtgggattggtcccctcggattagtcgattcttgaatcgg 7766739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8254804 - 8254752
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| | |||||| ||||||||||||||| ||||||| |||||| ||||    
T  8254804 ggtgggattgatccccttgaattagtcgattcttgaatcggataccgagtttt 8254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 15059454 - 15059402
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||| ||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  15059454 ggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 16539752 - 16539804
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| ||||||||| ||||||||||| || | ||||| |||||||||||    
T  16539752 ggtgggattggtcccctcaaattagtcgatacttgtatcggataccgaatttt 16539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 24122168 - 24122220
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  24122168 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 42328155 - 42328205
Alignment:
Q  4 tgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||| |||||||||||||||||||||||| | ||||| |||||| ||||    
T  42328155 tgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 42328205  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 264441 - 264400
Alignment:
Q  13 tcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||||||||||||||||| | ||||| |||||||||||    
T  264441 tcccctcgaattagtcgattcttggatcggataccgaatttt 264400  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 651480 - 651521
Alignment:
Q  13 tcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||||||||||||||||| | ||||| |||||||||||    
T  651480 tcccctcgaattagtcgattcttggatcggataccgaatttt 651521  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 837215 - 837256
Alignment:
Q  13 tcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||||||||||||||||| | ||||| |||||||||||    
T  837215 tcccctcgaattagtcgattcttggatcggataccgaatttt 837256  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 2639463 - 2639411
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  2639463 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 4718794 - 4718846
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  4718794 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4718846  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8765578 - 8765526
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  8765578 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8765526  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 20306057 - 20306109
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| ||||||||||||||||||||| || | ||||| |||||| ||||    
T  20306057 ggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 20306109  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 21092690 - 21092742
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| ||||||||||||||||||||| || | ||||| |||||| ||||    
T  21092690 ggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 21092742  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 21603379 - 21603431
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  21603379 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 34237707 - 34237655
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  34237707 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34237655  T

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Target: scaffold0623 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 1108 - 1076
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattct 34  Q
    |||||||| ||||||||||||||||||||||||    
T  1108 ggtgggattggtcccctcgaattagtcgattct 1076  T

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Target: scaffold0576 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 5134 - 5082
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattctcgaatcgggtaccgaatttt 54  Q
    |||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||    
T  5134 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 5082  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 9351 - 9319
Alignment:
Q  2 ggtgggataggtcccctcgaattagtcgattct 34  Q
    |||||||| ||||||||||||||||||||||||    
T  9351 ggtgggattggtcccctcgaattagtcgattct 9319  T

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