View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12087_high_5 (Length: 205)
Name: NF12087_high_5
Description: NF12087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12087_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 9488519 - 9488694
Alignment:
| Q |
13 |
cagagagggaaagacgaagagaaaaaagagacattaaaatgctgcaggccaaaatataaacagataatcacgagcaccggacaatccaccattgtcatca |
112 |
Q |
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| T |
9488519 |
cagaaagggaaagacgaagagaaaaaagagacattaaaatgctgcaggccaaaatataaacagataatcacgagcaccggacaacccactatcgtcatca |
9488618 |
T |
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| Q |
113 |
aaattgtcatgctcaagtttggatacggaagggaaagaaagatcggtgacaatgaagcaattaacatagatggtga |
188 |
Q |
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| T |
9488619 |
aaattgtcatgctcaagtttggatacggaagggaaagaaagatcggtgacaatgaagcaattaacatcgatggtga |
9488694 |
T |
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