View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12090_high_10 (Length: 253)

Name: NF12090_high_10
Description: NF12090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12090_high_10
NF12090_high_10
[»] chr4 (42 HSPs)
chr4 (1-235)||(6617057-6617300)
chr4 (52-140)||(19528872-19528960)
chr4 (52-140)||(46737110-46737198)
chr4 (53-153)||(54440561-54440661)
chr4 (52-145)||(26974700-26974793)
chr4 (52-140)||(34789838-34789926)
chr4 (25-140)||(33689832-33689947)
chr4 (52-140)||(21034692-21034780)
chr4 (52-140)||(24851921-24852009)
chr4 (52-140)||(55677413-55677501)
chr4 (52-143)||(36168329-36168420)
chr4 (52-142)||(14439829-14439919)
chr4 (52-140)||(12593478-12593566)
chr4 (52-140)||(34807119-34807207)
chr4 (52-136)||(45838554-45838638)
chr4 (62-143)||(41608374-41608455)
chr4 (52-140)||(28465084-28465172)
chr4 (52-140)||(41608870-41608958)
chr4 (52-106)||(35193345-35193399)
chr4 (52-153)||(21034225-21034326)
chr4 (52-140)||(28465536-28465624)
chr4 (52-140)||(34789385-34789473)
chr4 (52-140)||(56077779-56077867)
chr4 (52-108)||(12593059-12593115)
chr4 (52-140)||(26974286-26974374)
chr4 (52-140)||(40160097-40160185)
chr4 (52-148)||(45839005-45839100)
chr4 (53-140)||(18965143-18965230)
chr4 (52-143)||(28166004-28166095)
chr4 (77-140)||(35644042-35644105)
chr4 (53-144)||(40160547-40160637)
chr4 (52-106)||(17504414-17504468)
chr4 (52-118)||(33778067-33778133)
chr4 (52-118)||(35643580-35643646)
chr4 (52-106)||(54441024-54441078)
chr4 (52-140)||(24851319-24851407)
chr4 (52-108)||(30597974-30598030)
chr4 (52-143)||(6616672-6616763)
chr4 (55-106)||(10795769-10795820)
chr4 (52-143)||(41114157-41114248)
chr4 (53-143)||(229615-229705)
chr4 (52-118)||(14440283-14440349)
[»] chr8 (27 HSPs)
chr8 (52-142)||(18050046-18050136)
chr8 (52-140)||(15255856-15255944)
chr8 (52-140)||(16578111-16578199)
chr8 (52-140)||(28254881-28254969)
chr8 (52-140)||(599535-599623)
chr8 (52-140)||(6115566-6115654)
chr8 (52-140)||(9796729-9796817)
chr8 (52-145)||(35694333-35694426)
chr8 (52-140)||(7911071-7911159)
chr8 (52-140)||(34799538-34799626)
chr8 (52-121)||(41260716-41260785)
chr8 (52-148)||(18428217-18428313)
chr8 (52-140)||(35427267-35427355)
chr8 (52-140)||(35693871-35693959)
chr8 (52-140)||(42035775-42035863)
chr8 (52-140)||(7910619-7910707)
chr8 (52-140)||(18674151-18674239)
chr8 (52-119)||(42036227-42036294)
chr8 (52-140)||(2208717-2208805)
chr8 (52-140)||(9797182-9797270)
chr8 (52-140)||(15256286-15256374)
chr8 (52-140)||(41260274-41260362)
chr8 (52-111)||(26252841-26252900)
chr8 (52-118)||(18049615-18049681)
chr8 (58-143)||(28877350-28877435)
chr8 (52-140)||(5730820-5730908)
chr8 (52-108)||(28254460-28254516)
[»] chr2 (43 HSPs)
chr2 (52-140)||(38007953-38008041)
chr2 (52-143)||(15550673-15550764)
chr2 (52-150)||(33920606-33920703)
chr2 (52-140)||(43160012-43160100)
chr2 (52-140)||(649530-649618)
chr2 (52-140)||(4355758-4355846)
chr2 (52-140)||(4808882-4808970)
chr2 (52-140)||(6949899-6949987)
chr2 (52-140)||(20128192-20128280)
chr2 (52-140)||(25336055-25336143)
chr2 (52-140)||(43216164-43216252)
chr2 (52-142)||(9330250-9330340)
chr2 (54-140)||(42192700-42192786)
chr2 (52-140)||(42192243-42192331)
chr2 (52-139)||(16175805-16175892)
chr2 (52-140)||(32418162-32418248)
chr2 (52-140)||(16953389-16953477)
chr2 (52-143)||(63419-63510)
chr2 (52-119)||(11540093-11540160)
chr2 (52-140)||(6949454-6949542)
chr2 (75-141)||(5561018-5561084)
chr2 (52-105)||(13399460-13399513)
chr2 (52-140)||(62960-63048)
chr2 (52-140)||(24140129-24140217)
chr2 (52-140)||(38008406-38008494)
chr2 (52-140)||(44220100-44220188)
chr2 (53-140)||(28143485-28143572)
chr2 (52-158)||(20127721-20127827)
chr2 (53-143)||(20495193-20495283)
chr2 (52-118)||(32418601-32418667)
chr2 (52-140)||(11539640-11539728)
chr2 (57-119)||(2190536-2190598)
chr2 (54-140)||(33921069-33921155)
chr2 (52-118)||(43160466-43160532)
chr2 (52-140)||(4356211-4356299)
chr2 (52-140)||(4809334-4809422)
chr2 (52-140)||(5560054-5560142)
chr2 (52-140)||(31797232-31797320)
chr2 (52-143)||(13315493-13315584)
chr2 (62-140)||(649802-649880)
chr2 (52-118)||(16952960-16953026)
chr2 (52-118)||(17060931-17060997)
chr2 (52-140)||(44219647-44219735)
[»] chr1 (35 HSPs)
chr1 (54-140)||(29438933-29439019)
chr1 (52-140)||(10278551-10278639)
chr1 (52-140)||(16298685-16298773)
chr1 (52-140)||(34555382-34555470)
chr1 (52-140)||(30786774-30786863)
chr1 (52-143)||(37421160-37421251)
chr1 (52-143)||(39485065-39485156)
chr1 (53-141)||(17641825-17641913)
chr1 (52-118)||(52335965-52336031)
chr1 (52-140)||(44582060-44582148)
chr1 (52-140)||(50304442-50304530)
chr1 (52-143)||(8230096-8230187)
chr1 (52-138)||(4080026-4080112)
chr1 (52-121)||(444006-444075)
chr1 (52-141)||(45048157-45048246)
chr1 (52-140)||(1837508-1837596)
chr1 (52-140)||(2868163-2868251)
chr1 (52-140)||(23340186-23340274)
chr1 (52-140)||(9992610-9992698)
chr1 (52-144)||(50305240-50305332)
chr1 (52-118)||(34555837-34555903)
chr1 (25-140)||(37505495-37505610)
chr1 (52-108)||(8229672-8229728)
chr1 (52-108)||(10279002-10279058)
chr1 (52-140)||(37505070-37505158)
chr1 (53-140)||(44802627-44802714)
chr1 (53-106)||(23526695-23526748)
chr1 (52-108)||(29439377-29439433)
chr1 (52-118)||(37421399-37421466)
chr1 (53-140)||(50926233-50926320)
chr1 (63-148)||(44291777-44291862)
chr1 (52-140)||(2867914-2868002)
chr1 (52-108)||(9992190-9992246)
chr1 (52-108)||(21938598-21938654)
chr1 (52-108)||(30787253-30787309)
[»] chr5 (18 HSPs)
chr5 (52-141)||(14340865-14340954)
chr5 (52-140)||(32697681-32697769)
chr5 (52-140)||(18150179-18150267)
chr5 (52-140)||(21371151-21371239)
chr5 (52-140)||(28289687-28289775)
chr5 (52-140)||(15115547-15115635)
chr5 (52-139)||(38900648-38900735)
chr5 (52-141)||(4966818-4966907)
chr5 (52-140)||(4967226-4967314)
chr5 (52-140)||(5162024-5162112)
chr5 (52-140)||(15029764-15029852)
chr5 (52-140)||(38901095-38901183)
chr5 (25-140)||(8419048-8419163)
chr5 (53-106)||(32305855-32305908)
chr5 (52-108)||(18149768-18149824)
chr5 (52-140)||(28290099-28290187)
chr5 (63-141)||(14340400-14340478)
chr5 (52-108)||(19291391-19291447)
[»] chr7 (39 HSPs)
chr7 (52-140)||(7732491-7732579)
chr7 (52-140)||(24929763-24929851)
chr7 (52-137)||(35161257-35161342)
chr7 (52-140)||(5333883-5333971)
chr7 (52-140)||(25637200-25637288)
chr7 (56-140)||(27245206-27245290)
chr7 (52-140)||(39388723-39388811)
chr7 (53-143)||(787242-787332)
chr7 (52-142)||(28687954-28688043)
chr7 (52-140)||(9181867-9181955)
chr7 (57-149)||(11973862-11973954)
chr7 (52-140)||(14311318-14311406)
chr7 (52-140)||(16081754-16081842)
chr7 (52-140)||(48247590-48247678)
chr7 (25-145)||(26048374-26048494)
chr7 (52-142)||(26026318-26026408)
chr7 (52-140)||(5334274-5334362)
chr7 (52-140)||(5746096-5746183)
chr7 (53-140)||(34595228-34595315)
chr7 (52-141)||(25637653-25637742)
chr7 (52-108)||(2758153-2758209)
chr7 (52-140)||(9181535-9181623)
chr7 (52-140)||(15712368-15712456)
chr7 (53-140)||(4477705-4477792)
chr7 (53-140)||(39136689-39136776)
chr7 (52-140)||(786785-786873)
chr7 (87-143)||(5184428-5184484)
chr7 (52-140)||(7732942-7733030)
chr7 (52-140)||(48248047-48248135)
chr7 (52-107)||(11971370-11971425)
chr7 (55-106)||(39136991-39137042)
chr7 (52-140)||(9394185-9394272)
chr7 (52-140)||(16917716-16917804)
chr7 (52-108)||(26047992-26048048)
chr7 (52-108)||(27245659-27245715)
chr7 (53-140)||(16081302-16081389)
chr7 (52-118)||(28687618-28687684)
chr7 (52-141)||(5745641-5745730)
chr7 (52-108)||(14311742-14311798)
[»] chr3 (55 HSPs)
chr3 (52-140)||(49720374-49720462)
chr3 (52-140)||(51827960-51828048)
chr3 (52-140)||(46013425-46013513)
chr3 (52-143)||(16689358-16689449)
chr3 (52-143)||(32730389-32730480)
chr3 (58-140)||(41998689-41998771)
chr3 (54-140)||(49952003-49952089)
chr3 (52-144)||(40839107-40839199)
chr3 (53-140)||(14654645-14654732)
chr3 (52-146)||(43678739-43678833)
chr3 (63-140)||(30513725-30513802)
chr3 (52-137)||(34105105-34105190)
chr3 (55-147)||(40275089-40275181)
chr3 (52-140)||(44676475-44676563)
chr3 (52-140)||(51828542-51828630)
chr3 (52-140)||(52237272-52237360)
chr3 (52-140)||(52375786-52375874)
chr3 (52-143)||(40838652-40838743)
chr3 (52-141)||(22370598-22370687)
chr3 (52-140)||(330291-330379)
chr3 (52-120)||(38535750-38535818)
chr3 (52-140)||(40275549-40275636)
chr3 (52-139)||(329850-329937)
chr3 (52-143)||(49951546-49951637)
chr3 (52-143)||(51473311-51473402)
chr3 (67-140)||(39010078-39010151)
chr3 (52-105)||(52236854-52236907)
chr3 (52-140)||(14654202-14654290)
chr3 (52-140)||(47431699-47431787)
chr3 (52-140)||(52375330-52375418)
chr3 (52-108)||(55389640-55389696)
chr3 (52-140)||(55390052-55390140)
chr3 (61-140)||(25534893-25534972)
chr3 (52-143)||(27199702-27199793)
chr3 (52-143)||(44676927-44677018)
chr3 (52-140)||(2044274-2044362)
chr3 (52-140)||(2051298-2051386)
chr3 (52-140)||(16701247-16701335)
chr3 (52-140)||(38535312-38535400)
chr3 (52-140)||(41998232-41998320)
chr3 (52-140)||(51472858-51472946)
chr3 (55-104)||(43222848-43222897)
chr3 (52-117)||(49720816-49720881)
chr3 (52-140)||(43678298-43678386)
chr3 (52-140)||(46013878-46013966)
chr3 (53-140)||(36701109-36701196)
chr3 (53-140)||(36701552-36701639)
chr3 (52-119)||(37075710-37075777)
chr3 (53-140)||(37076131-37076217)
chr3 (52-87)||(43222446-43222481)
chr3 (52-106)||(8874141-8874195)
chr3 (52-118)||(50662867-50662933)
chr3 (55-140)||(49407799-49407884)
chr3 (52-140)||(33412609-33412697)
chr3 (52-140)||(50900982-50901070)
[»] chr6 (13 HSPs)
chr6 (52-140)||(5120924-5121012)
chr6 (52-140)||(31574180-31574268)
chr6 (52-143)||(25468849-25468940)
chr6 (52-145)||(31073597-31073690)
chr6 (25-149)||(28636286-28636410)
chr6 (52-140)||(29891083-29891171)
chr6 (52-140)||(5114471-5114559)
chr6 (52-108)||(24640640-24640696)
chr6 (52-140)||(25472468-25472556)
chr6 (52-140)||(35163642-35163730)
chr6 (89-140)||(30250724-30250775)
chr6 (53-143)||(32836007-32836096)
chr6 (64-148)||(31073138-31073222)
[»] scaffold0712 (1 HSPs)
scaffold0712 (54-143)||(6853-6942)
[»] scaffold0709 (1 HSPs)
scaffold0709 (54-143)||(6871-6960)
[»] scaffold0097 (2 HSPs)
scaffold0097 (52-140)||(46269-46357)
scaffold0097 (52-140)||(46723-46811)
[»] scaffold0007 (4 HSPs)
scaffold0007 (53-118)||(205823-205888)
scaffold0007 (53-140)||(210793-210880)
scaffold0007 (53-143)||(204928-205018)
scaffold0007 (53-143)||(205358-205448)
[»] scaffold0108 (1 HSPs)
scaffold0108 (53-145)||(15554-15646)


Alignment Details
Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 6617057 - 6617300
Alignment:
Q  1 actaaaactgtcatttctggagttggagatagg--------actaaaactgcnnnnnnn-tatagtttagggacgattttattcgatttaaaagaggtag 91  Q
    |||||||||||||||||||||||||||||||||        |||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  6617057 actaaaactgtcatttctggagttggagatagggagataggactaaaactgcaaaaaaaatatagtttagggacgattttattcgatttaaaagaggtag 6617156  T
Q  92 gaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccattttataaataaggttttcctgtgtttcatattgaaaattttacgta 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6617157 gaccaatttcgtgagttagtcaaaatgcaagtagcaaaaatgtaattaaaccattttataaataaggttttcctgtgtttcatattgaaaattttacgta 6617256  T
Q  192 aacaccacaattgacaccaagagatattgttgtcgggcgtaaat 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6617257 aacaccacaattgacaccaagagatattgttgtcgggcgtaaat 6617300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 19528960 - 19528872
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| | ||||| |||||||||    
T  19528960 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaa 19528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 46737110 - 46737198
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  46737110 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 46737198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 54440661 - 54440561
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccattttataa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||  | ||||||||    
T  54440661 atagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagtctttttataa 54440562  T
Q  153 a 153  Q
    |    
T  54440561 a 54440561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 26974700 - 26974793
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccat 145  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| | |||||||||| | ||||||||||||||| ||||    
T  26974700 tatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattcaaaatgcaaggaccaaaaatgtaattaacccat 26974793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 34789838 - 34789926
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  34789838 tatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 34789926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 33689947 - 33689832
Alignment:
Q  25 ggagataggactaaaactgcnnnnnnntatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagta 124  Q
    ||||||| ||||||||||||       ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||| || |||||||||| |    
T  33689947 ggagatatgactaaaactgcaaaaacatatagtttaaggacgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaagga 33689848  T
Q  125 gcaaaaatgtaattaa 140  Q
     ||||| |||||||||    
T  33689847 ccaaaagtgtaattaa 33689832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 21034692 - 21034780
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  21034692 tatagttcagggacgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 21034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 24851921 - 24852009
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||| | ||||| | |||||||    
T  24851921 tatagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaa 24852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 55677413 - 55677501
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || ||||| |||| | ||||| |||||||||    
T  55677413 tatagtttagagacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaa 55677501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 36168420 - 36168329
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||| |||| |||||||||| |||||||||||||||||| ||||||||||||| ||| || |||||||||| ||||||| ||||||||||||    
T  36168420 tataatttaaggacgattttgttcgatttaaaagaggtaagaccaatttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaaacc 36168329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 14439919 - 14439829
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaac 142  Q
    |||||||||||||||||||| ||  |||||||| ||||| ||||||||||||||||| || |||||||||| | |||||||||||||||||    
T  14439919 tatagtttagggacgattttgtttaatttaaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaac 14439829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 12593478 - 12593566
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||  ||||||||| |||||||||||||||||| ||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  12593478 tatagtttacagacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 12593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34807207 - 34807119
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||  | |||||||||| | ||||| |||||||||    
T  34807207 tatactttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 34807119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 45838638 - 45838554
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaa 136  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| || ||||| |||| | ||||| |||||    
T  45838638 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaa 45838554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 41608455 - 41608374
Alignment:
Q  62 ggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||||  | |||||||||| | ||||| ||||||||||||    
T  41608455 ggacgattttgttcgatttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaaacc 41608374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 28465172 - 28465084
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||||||||||||||||||||| ||||||||| |||| || |||||| ||| |  |||| |||||||||    
T  28465172 tatagtttaaggacgattttgttcgatttaaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaa 28465084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 41608870 - 41608958
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| | |||||||| || ||||||||||||||||||||||||||||||||| || ||||||  || | ||||| |||||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 41608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 35193399 - 35193345
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgag 106  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  35193399 tatagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgag 35193345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 21034326 - 21034225
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccattttata 151  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| ||||||||| ||| ||| ||    
T  21034326 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattttta 21034227  T
Q  152 aa 153  Q
    ||    
T  21034226 aa 21034225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 28465536 - 28465624
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  28465536 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28465624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34789473 - 34789385
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  34789473 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 34789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 56077779 - 56077867
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || || ||||| ||||||||||| || ||||||  || | |||||||||||||||    
T  56077779 tatagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 56077867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 12593115 - 12593059
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||||||| ||||| ||||| |||||||||||    
T  12593115 tatagtttaaggacgattttgttcgatttaaaaaaggtatgaccattttcgtgagtt 12593059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 26974374 - 26974286
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || || ||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  26974374 tatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaa 26974286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 40160185 - 40160097
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||| |||| |||||||||||||||| | ||| | ||||||||| | || |||||||  | | |||||||||||||||    
T  40160185 tatagtttagggacggttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatgcggggatcaaaaatgtaattaa 40160097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 45839005 - 45839100
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccatttt 148  Q
    ||||||||| |||||||||| |||||||||||| || ||||||| |||||||||||| || |||||   || | ||||| |||||||||||| ||||    
T  45839005 tatagtttaaggacgattttgttcgatttaaaaaagataggacc-atttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaaaccttttt 45839100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 18965230 - 18965143
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||| |||||||||| |||||||| ||||||| | ||||  |||||||||| ||| ||||||  || | |||||||||||||||    
T  18965230 atagtttaaggacgattttgttcgatttgaaagaggcaagaccgttttcgtgagtaagttaaaatgtgaggatcaaaaatgtaattaa 18965143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 28166095 - 28166004
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||| ||||| |||||||||||| || |||||||| ||||||||||| || |||||   || | ||||||| ||||||||||    
T  28166095 tatagtttaaggacaattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaaacc 28166004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 35644042 - 35644105
Alignment:
Q  77 atttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||| |||| |||||||||||| || |||||||||| | ||||| |||||||||    
T  35644042 atttaaaagaggtatgacctatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 35644105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 40160547 - 40160637
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacca 144  Q
    |||||||||| ||| |||| ||| |||| ||||||| | ||| | ||||||||||| || |||||||||| | |||||||||||||||||||    
T  40160547 atagtttagg-acggttttgttcaatttgaaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaacca 40160637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 17504414 - 17504468
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgag 106  Q
    ||||||||| ||||| |||| ||||||||||||||| |||||||| |||||||||    
T  17504414 tatagtttaaggacggttttgttcgatttaaaagagataggaccattttcgtgag 17504468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 33778067 - 33778133
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    |||| |||||| |||||||| || |||||||||||||||| | || |||||||||||||| ||||||    
T  33778067 tataatttaggaacgattttgtttgatttaaaagaggtagaatcattttcgtgagttagtcaaaatg 33778133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 35643646 - 35643580
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||||||| |||| ||| || |||||||| ||||||||||| || ||||||    
T  35643646 tatagtttaaggacgattttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatg 35643580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 54441024 - 54441078
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgag 106  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||||||||    
T  54441024 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgag 54441078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 24851407 - 24851319
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||| |||||||| || ||| |||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  24851407 tatagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 24851319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 30597974 - 30598030
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    |||| ||||||||||||||| |||||||||||||||  || ||||||| ||||||||    
T  30597974 tataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagtt 30598030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 6616763 - 6616672
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||||||||| |||||||||||| |  || ||||| |||||||||||  | ||||||  || | ||||| ||||||||||||    
T  6616763 tatagtttaaggacgattttgttcgatttaaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaaacc 6616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 10795769 - 10795820
Alignment:
Q  55 agtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgag 106  Q
    ||||||| ||||||||| |||||||| ||||||  |||||||||||||||||    
T  10795769 agtttagagacgattttgttcgatttgaaagagagaggaccaatttcgtgag 10795820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 41114248 - 41114157
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| ||||| |||| |||||||||||| || |||||||  ||||||||||| || ||||||  || | ||||| ||| ||||||||    
T  41114248 tatagtttaaggacgtttttgttcgatttaaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaaacc 41114157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 229615 - 229705
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||| |||||||||| || ||||| ||||||| | ||||| ||||||||| | || ||||||| |  | ||||| ||||||||||||    
T  229615 atagtttaaggacgattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaaacc 229705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 14440283 - 14440349
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| ||| |||||| |||||||||||| || |||||||| |||||| |||| || ||||||    
T  14440283 tatagtttaaggatgattttgttcgatttaaaaaagataggaccattttcgtaagttggtcaaaatg 14440349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 18050046 - 18050136
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaac 142  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || |||||||||| | |||||||||||||||||    
T  18050046 tatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaac 18050136  T

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Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 15255944 - 15255856
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  15255944 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 15255856  T

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Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 16578199 - 16578111
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||    
T  16578199 tataatttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaa 16578111  T

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Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 28254881 - 28254969
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  28254881 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 28254969  T

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Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 599623 - 599535
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| |||||||| |||||| |||||||||||||||||| ||||||||||||||||| || |||||||||| | |||||||||||||||    
T  599623 tataatttagggatgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 599535  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 6115566 - 6115654
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||| |||| | ||||| | |||||||    
T  6115566 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaa 6115654  T

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Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 9796817 - 9796729
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||||| | ||||| |||||||||    
T  9796817 tatagtttatggatgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9796729  T

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Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 35694333 - 35694426
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccat 145  Q
    ||||||||| |||||||||| |||||||||||| | ||||||||| ||| |||||||||| |||||| ||| | ||||| ||||||||||||||    
T  35694333 tatagtttaaggacgattttgttcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaaaccat 35694426  T

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Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 7911071 - 7911159
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| || ||||||| || |  |||| |||||||||    
T  7911071 tatagtttagggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaa 7911159  T

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Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 34799538 - 34799626
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||| | || || |||||| ||| | ||||| |||||||||    
T  34799538 tatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaa 34799626  T

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Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 41260716 - 41260785
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaa 121  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||  | |||||||||    
T  41260716 tatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttgatcaaaatgcaa 41260785  T

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Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 18428217 - 18428313
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccatttt 148  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| |||||||||||| ||||    
T  18428217 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaaccttttt 18428313  T

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Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 35427267 - 35427355
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||| |||||||||||||| |||| ||||||||||| || ||||||| || | ||||| |||||||||    
T  35427267 tataatttagggacgattttgttcggtttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 35427355  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 35693959 - 35693871
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||||||||||||||||||||||| | || |||||| | || || |||||||||| | ||||| |||||||||    
T  35693959 tatagtttatggacgattttattcgatttaaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaa 35693871  T

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Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 42035863 - 42035775
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  42035863 tatagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42035775  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 7910707 - 7910619
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| ||||||||||||||||||  |||| |||||||||||  | ||||||  || | |||||||||||||||    
T  7910707 tataatttagggacgattttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaa 7910619  T

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Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 18674239 - 18674151
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||| || || ||||||||||||| || || ||| |||||| | ||| | |||||||||    
T  18674239 tatagtttagggacgattttgttcgatttaaaagtggaagaaccaatttcgtgaattggtcaaagtgcaaggaccaagagtgtaattaa 18674151  T

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Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 42036227 - 42036294
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgc 119  Q
    |||||||||||||||||||| |||||||||||||||||| || || |||||| |||| || |||||||    
T  42036227 tatagtttagggacgattttgttcgatttaaaagaggtaagatcattttcgtaagttggtcaaaatgc 42036294  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 2208805 - 2208717
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||| | ||||||||||| || ||||||  || | ||||| |||||||||    
T  2208805 tatagtttaaggacgattttgttcgatttaaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 2208717  T

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Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 9797182 - 9797270
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| ||||||||||||| ||||||||| || ||| |||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  9797182 tatagtttaaggacgattttatttgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9797270  T

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Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 15256286 - 15256374
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||| |||||| || ||||||  || | ||||| |||||||||    
T  15256286 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 15256374  T

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Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 41260362 - 41260274
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||| |||||| || ||||||  || | ||||| |||||||||    
T  41260362 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 41260274  T

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Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 26252900 - 26252841
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagt 111  Q
    |||||||||||||||||||| ||||||||||||||| |   ||||||||||||| |||||    
T  26252900 tatagtttagggacgattttgttcgatttaaaagagatgttaccaatttcgtgaattagt 26252841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 18049681 - 18049615
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||| |||||||||||| || ||| |||| ||||||||||| || ||||||    
T  18049681 tatagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatg 18049615  T

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Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 28877350 - 28877435
Alignment:
Q  58 ttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||| ||||| ||| |||| |||||||||  |||| ||||||||||| || ||||||| || | ||||| ||||||||||||    
T  28877350 ttagggacaattttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaacc 28877435  T

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Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 5730908 - 5730820
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| || ||||||||| || |||||| | ||||||||||| || ||||||  || | ||||| |||||||||    
T  5730908 tatagtttaaggacgattttgtttgatttaaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5730820  T

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Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 28254516 - 28254460
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| ||| |||||||| || |||||||| |||||||||||    
T  28254516 tatagtttaaggacgattttgttcaatttaaaatagataggaccattttcgtgagtt 28254460  T

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Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 38008041 - 38007953
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  38008041 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 38007953  T

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Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 15550764 - 15550673
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | |||||||| | ||||| ||||||||||||    
T  15550764 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaaacc 15550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 33920703 - 33920606
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccattttat 150  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||||| || |||||||||| | ||||||||||||| |||||||||||    
T  33920703 tatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaatt-aaccattttat 33920606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 43160100 - 43160012
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||  | |||||||||| | |||||||||||||||    
T  43160100 tatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 649618 - 649530
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| || || ||||||| | ||||| |||||||||    
T  649618 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaa 649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 4355846 - 4355758
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||  || |||||||||| | ||||| |||||||||    
T  4355846 tatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaa 4355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 4808970 - 4808882
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||| |  ||||||||||||||    
T  4808970 tatagtttatggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaactaaaaatgtaattaa 4808882  T

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Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 6949899 - 6949987
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  6949899 tatagtttagggacgattttgttctatttaaaagatgtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 6949987  T

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Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 20128192 - 20128280
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  20128192 tatagtttaaggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaa 20128280  T

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Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 25336055 - 25336143
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  25336055 tataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 25336143  T

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Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 43216164 - 43216252
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||| ||||| |  |||| |||||||||    
T  43216164 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaa 43216252  T

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Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 9330250 - 9330340
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaac 142  Q
    |||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||| || |||||||||| | ||||| |||||||||||    
T  9330250 tatagtttggggacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaaac 9330340  T

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Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 42192700 - 42192786
Alignment:
Q  54 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||| || | ||||| |||||||||    
T  42192700 tagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 42192786  T

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Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 42192331 - 42192243
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  42192331 tatagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42192243  T

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Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 16175805 - 16175892
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaatta 139  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||| || |||||| ||| | ||||| ||||||||    
T  16175805 tatagtttaaggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

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Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 32418248 - 32418162
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| || |||||||||| | || || |||||||||    
T  32418248 tatagtttagggacgattttgttcgatt--aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaa 32418162  T

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Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 16953389 - 16953477
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| |||||||||  |||| ||||||||||||||||||||||||||||| |||||| || |||||||||| | ||||| |||||||||    
T  16953389 tatactttagggacatttttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaa 16953477  T

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Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 63419 - 63510
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||||||||||||| || |||||||||||| || ||||| ||||||||||| || ||||| |||| | ||||||| ||||||||||    
T  63419 tatagtttagggacgattttgtttgatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaaacc 63510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 11540093 - 11540160
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgc 119  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| || |||||||    
T  11540093 tatagtttatggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgc 11540160  T

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Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 6949542 - 6949454
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||| | |||||||||| |||||||||||| || |||||||| |||||||||||||| ||||||  || | |||||||||||||||    
T  6949542 tatagttaaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaa 6949454  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 5561018 - 5561084
Alignment:
Q  75 cgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||  |||||||||    
T  5561018 cgatttaaaagaggtaggatcaatttcgtgagttagttaaaatgcaaggaccaaaagggtaattaaa 5561084  T

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Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 13399513 - 13399460
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtga 105  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  13399513 tatagtttagggacgattttgttccatttaaaagaggtatgaccaatttcgtga 13399460  T

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Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 63048 - 62960
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||| ||| ||||||||||| ||||||||||| || |||||| ||| | || || |||||||||    
T  63048 tatagtttaaggacgattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaa 62960  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 24140129 - 24140217
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| || ||||||||| ||||||||||| ||||||||||| || || |||| || | ||||| |||||||||    
T  24140129 tatagtttatggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaa 24140217  T

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Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 38008406 - 38008494
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  38008406 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 38008494  T

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Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 44220100 - 44220188
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| || ||||||||| ||||| ||||| ||||||||||| || ||||||| || |  |||| |||||||||    
T  44220100 tatagtttagggacgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaa 44220188  T

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Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 28143485 - 28143572
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| | || ||||||| || | ||||| || ||||||    
T  28143485 atagtttagggacgattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaa 28143572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 20127827 - 20127721
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccattttata 151  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||||||| || || ||||||  || | ||||| ||||||||| || |||| |     
T  20127827 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagcctttttttt 20127728  T
Q  152 aataagg 158  Q
    |||||||    
T  20127727 aataagg 20127721  T

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Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 20495283 - 20495193
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||||||||||||| || ||||||||||||| | || || ||||||||||| || ||||||| || | ||||| || |||||||||    
T  20495283 atagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaaacc 20495193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 32418601 - 32418667
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||| ||||||||||||||||||| | ||||||||||| || || ||||||    
T  32418601 tatagtttaaggacgattttgttcgatttaaaagaggtagaatcaatttcgtgaattggtcaaaatg 32418667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 11539728 - 11539640
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| |  |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  11539728 tatagtttaaggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 11539640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 2190536 - 2190598
Alignment:
Q  57 tttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgc 119  Q
    ||||||||||||||| |||||||| ||| ||| ||||||||||||||||| | || |||||||    
T  2190536 tttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgc 2190598  T

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Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 33921069 - 33921155
Alignment:
Q  54 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||  ||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  33921069 tagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 33921155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 43160466 - 43160532
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||  |||||||||||| || |||||||| ||||||||||| || ||||||    
T  43160466 tatagtttaaggacgatttagttcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatg 43160532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 4356211 - 4356299
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || || ||||| | ||||||||| || ||||||  || | ||||| |||||||||    
T  4356211 tatagtttaaggacgattttgttcgatttaaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 4356299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 4809334 - 4809422
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||| ||| ||| |||||||| |  |||||||| |||||||||||||| ||||||  || | ||||| |||||||||    
T  4809334 tatagtttaaggacgactttgttcaatttaaaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaa 4809422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 5560142 - 5560054
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||| |||||||| || || ||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  5560142 tatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5560054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 31797232 - 31797320
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||| |||| |||||||| ||||||| | ||||| ||||||||| | || ||||||  || | ||||| |||||||||    
T  31797232 tatagtttagggacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaa 31797320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 13315584 - 13315493
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||||||||| |||||||||||| || || ||||| |||| |||||| || ||||||  || |  |||| ||||||||||||    
T  13315584 tatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaaacc 13315493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 649802 - 649880
Alignment:
Q  62 ggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||| |||||||||||| |  |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  649802 ggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 16953026 - 16952960
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||| |||||||||||| || || ||| | ||||||||||| || ||||||    
T  16953026 tatagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatg 16952960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 17060997 - 17060931
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||| |||||||||||| || || ||| | ||||||||||| || ||||||    
T  17060997 tatagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatg 17060931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 44219735 - 44219647
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| |||| |||| ||||| |||||||||||| |||||||| || ||| |||||||  | |||||| ||| | ||||| |||||||||    
T  44219735 tataatttaaggacaattttgttcgatttaaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaa 44219647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 29439019 - 29438933
Alignment:
Q  54 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  29439019 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 29438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 10278639 - 10278551
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||| | ||||| |||||||||    
T  10278639 tatagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 10278551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 16298773 - 16298685
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||||||||||   |||||||||||||||    
T  16298773 tatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaagggccaaaaatgtaattaa 16298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 34555470 - 34555382
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||| | ||||| |||||||||    
T  34555470 tatagtttagggacgattttgttcgatttaaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaa 34555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 30786863 - 30786774
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaa-tttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || |||||||||| | ||||| |||||||||    
T  30786863 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaa 30786774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 37421251 - 37421160
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||| || || |||||||||  | ||||| ||||||||||||    
T  37421251 tatagtttagggacgattttgttcgatttaaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaaacc 37421160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 39485156 - 39485065
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| |||| ||||||| || | ||||| ||||||||||||    
T  39485156 tatagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaaacc 39485065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 17641825 - 17641913
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| || ||||||| || | ||||| ||||||||||    
T  17641825 atagtttagggacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 17641913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 52335965 - 52336031
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || ||||||    
T  52335965 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatg 52336031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 44582148 - 44582060
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||||||||| |||| || |||||| ||| | ||||| |||||||||    
T  44582148 tataatttagagacgattttgttcgatttaaaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaa 44582060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 50304530 - 50304442
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||| || ||||||| || | ||||| |||||||||    
T  50304530 tatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 50304442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 8230096 - 8230187
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||||||||||||| ||||||||||||||||||  |||| |||||||| |  || ||||||| || | ||||||||||||||||||    
T  8230096 tatagtttagggacgattttgttcgatttaaaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaaacc 8230187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 4080112 - 4080026
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaatt 138  Q
    |||||||||||||||||||| |||||||||||| ||||| || |||||||||||||| || || ||||||| | ||||| |||||||    
T  4080112 tatagtttagggacgattttgttcgatttaaaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaatt 4080026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 444006 - 444075
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaa 121  Q
    ||||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||| || |||||||||    
T  444006 tatagtttaggaacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaa 444075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 45048246 - 45048157
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    ||||||||| |||||||||| ||| ||||||||||||||| |||| |||||| |||| || |||||||||| | ||||| ||||||||||    
T  45048246 tatagtttatggacgattttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaaa 45048157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 1837596 - 1837508
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||| ||||| ||||||||||||||| || || ||||||||||||||  | |||||||||| | ||||| |||||||||    
T  1837596 tatagtttagggacaattttgttcgatttaaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 1837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 2868163 - 2868251
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||| || ||||||  || | ||||| |||||||||    
T  2868163 tatagtgtagggacgattttgttcgatttaaaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaa 2868251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 23340274 - 23340186
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |  ||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||  | ||||| |||||||||    
T  23340274 tatagtttatgagcgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaa 23340186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 9992610 - 9992698
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| | |||||||| |||||||||||| || |||||||| |||| |||||| || |||||||||| | ||||| |||||||||    
T  9992610 tatagtttaagcacgattttgttcgatttaaaaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 9992698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 50305240 - 50305332
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacca 144  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||| |||||| || ||||||  || | ||||| |||||||||||||    
T  50305240 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaaacca 50305332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 34555837 - 34555903
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||    
T  34555837 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatg 34555903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 37505495 - 37505610
Alignment:
Q  25 ggagataggactaaaactgcnnnnnnntatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagta 124  Q
    ||||||||||||||||||||       ||||||||| |||||||||| || | |||||||||| || || |||||||||||||| || |||||  ||| |    
T  37505495 ggagataggactaaaactgcaaaaacatatagtttatggacgattttgtttgttttaaaagagatatgatcaatttcgtgagttggtcaaaataaaagga 37505594  T
Q  125 gcaaaaatgtaattaa 140  Q
     ||||||| |||||||    
T  37505595 ccaaaaatataattaa 37505610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 8229728 - 8229672
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    |||||||||| |||||||||||||||||||||||| |||| | || |||||||||||    
T  8229728 tatagtttagagacgattttattcgatttaaaagatgtagaatcattttcgtgagtt 8229672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 10279002 - 10279058
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||||||||||    
T  10279002 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtt 10279058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 37505158 - 37505070
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || ||| |||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  37505158 tatagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 37505070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 44802627 - 44802714
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||||||| |||  ||| ||||||| | ||||| ||||||||| | || |||||||||| | ||||| |||||||||    
T  44802627 atagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 44802714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 23526748 - 23526695
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgag 106  Q
    ||||| |||||| |||||| |||||||||||||||| ||||||| |||||||||    
T  23526748 atagtctagggatgattttgttcgatttaaaagaggcaggaccattttcgtgag 23526695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 29439377 - 29439433
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||||||| || ||||| || |||||||||||    
T  29439377 tatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagtt 29439433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 37421399 - 37421466
Alignment:
Q  52 tatagtttagggacgattttattcgattt-aaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||| |||||||| |||| || |||||||| ||||||||||| || ||||||    
T  37421399 tatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatg 37421466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 50926320 - 50926233
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||||||| |||||||| ||||||||| ||  | ||||||||| | || ||||||  || | ||||| |||||||||    
T  50926320 atagtttagggacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaa 50926233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 44291777 - 44291862
Alignment:
Q  63 gacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccatttt 148  Q
    |||||||||||||||||||||||||  | ||||| |||| |||| | || ||||| |||| |  ||||||| ||||||||| ||||    
T  44291777 gacgattttattcgatttaaaagagacatgaccattttcatgagctggtcaaaatacaaggactaaaaatgcaattaaaccttttt 44291862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 2868002 - 2867914
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||  ||| ||||| ||||||||||||||| || || || ||||||||||| || ||||||| |  | ||||| |||||||||    
T  2868002 tatagtttaacgacaattttgttcgatttaaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaa 2867914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 9992246 - 9992190
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||| ||||| |||||||||||| || |||||||| || ||||||||    
T  9992246 tatagtttaaggaccattttgttcgatttaaaaaagataggaccatttccgtgagtt 9992190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 21938654 - 21938598
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||||||| || || || || |||||||||||    
T  21938654 tatagtttatggacgattttgttcgatttaaaaaagataagatcattttcgtgagtt 21938598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 30787253 - 30787309
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||| ||| || || ||||| |||||||||||    
T  30787253 tatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagtt 30787309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 14340865 - 14340954
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    ||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  14340865 tatagtttatggacgattttgttcgatttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaaa 14340954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 32697681 - 32697769
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||||||  | ||||| |||||||||    
T  32697681 tatagtttagggacgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaa 32697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 18150179 - 18150267
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| || ||||| |||| | || || |||||||||    
T  18150179 tatagtttagggatgattttgttcgatttaaaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaa 18150267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 21371151 - 21371239
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||  |||||| || |||||||||| | ||||| |||||||||    
T  21371151 tatagtttagggacgattttgtttgatttaaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaa 21371239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 28289775 - 28289687
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||| || |||||||||| | ||||| |||||||||    
T  28289775 tataatttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 28289687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 15115547 - 15115635
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  15115547 tatagtttaaggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaa 15115635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 38900735 - 38900648
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaatta 139  Q
    |||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||| || ||||||| || | ||||| ||||||||    
T  38900735 tataatttagggacgattttgttcgatttaaaagaggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 4966907 - 4966818
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    |||||||||||||||||||| |||||||||||||||| || || | ||||||||||| || ||||||| || | ||||| ||||||||||    
T  4966907 tatagtttagggacgattttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 4966818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 4967226 - 4967314
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||| || ||||||  || | ||||| |||||||||    
T  4967226 tatagtttagggacgattttgttcgatttaaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 4967314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 5162024 - 5162112
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||||||||||||||||| ||| ||| || |||||| || |||||||||| |  ||||||||||||||    
T  5162024 tataatttagggacgattttgttcgatttaaaagaggtatgactaatctcatgagttggtcaaaatgcaaggataaaaaatgtaattaa 5162112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 15029764 - 15029852
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| ||||| ||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  15029764 tatagtttaaggacgattttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaa 15029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 38901095 - 38901183
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||||||||||||  |||||||||| |||||||  ||||| |||||| ||| | ||||| |||||||||    
T  38901095 tatagtttaaggacgattttgttcgatttaaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaa 38901183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 8419048 - 8419163
Alignment:
Q  25 ggagataggactaaaactgcnnnnnnntatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagta 124  Q
    ||||||||||||||||||||       ||||||||| |||||||||| ||| |||||||| || ||||||||  |||||||||| || ||||||  || |    
T  8419048 ggagataggactaaaactgcaaaaaaatatagtttaaggacgattttgttcaatttaaaaaagataggaccatattcgtgagttggtcaaaatggtagga 8419147  T
Q  125 gcaaaaatgtaattaa 140  Q
     ||||| |||||||||    
T  8419148 ccaaaagtgtaattaa 8419163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 32305908 - 32305855
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgag 106  Q
    ||||||||||||||||||| ||||||||||||||||||| || | |||||||||    
T  32305908 atagtttagggacgattttgttcgatttaaaagaggtagaacaattttcgtgag 32305855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 18149824 - 18149768
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||||||||||    
T  18149824 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtt 18149768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 28290099 - 28290187
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||||||||||||  | |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  28290099 tatagtttaaggacgattttgttcgatttaaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28290187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 14340478 - 14340400
Alignment:
Q  63 gacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    ||||||||| |||||||||||| || |||||||| |||||||||||  | ||||||  || | ||||||||||||||||    
T  14340478 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaaa 14340400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 19291447 - 19291391
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||| |||||||    
T  19291447 tatagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagtt 19291391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 7732579 - 7732491
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  | |||||||||| | |||||||||||||||    
T  7732579 tatagtttaaggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 7732491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 24929763 - 24929851
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| || |||||||||| | |||||||||||||||    
T  24929763 tatagtttagggacgattttgtttgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 24929851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 35161257 - 35161342
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaat 137  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| || |||||||||| | ||||| ||||||    
T  35161257 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 5333971 - 5333883
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| || |||||||||| | ||||| |||||||||    
T  5333971 tatagtttagggacgattttgttcgatttaaaagaggtacgaccattttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 5333883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 25637288 - 25637200
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || || ||||||| | ||||| |||||||||    
T  25637288 tatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaa 25637200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 27245290 - 27245206
Alignment:
Q  56 gtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  27245290 gtttggggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 27245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 39388723 - 39388811
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| || |||||||||| | ||||| |||||||||    
T  39388723 tatagtttagagacgattttgttcgatttaaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 39388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 787242 - 787332
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||| | || | ||||| ||||||||||||    
T  787242 atagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaaacc 787332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 28687954 - 28688043
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaac 142  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||||| || |||||||||| | | |||||||||||||||    
T  28687954 tatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaagga-ccaaaatgtaattaaac 28688043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 9181867 - 9181955
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||||| || || |||||||||| | ||||| |||||||||    
T  9181867 tatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaa 9181955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 11973862 - 11973954
Alignment:
Q  57 tttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccatttta 149  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||  ||| || |||||||||| | ||||||||||||||||| ||||||    
T  11973862 tttagggacgattttgttcaatttaaaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaaactatttta 11973954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 14311406 - 14311318
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||  |||||| || |||||||||||| ||||||| |||||||    
T  14311406 tatagtttagggacgattttattcaatttaaaagaggtataaccaattttatgagttggttaaaatgcaagtaccaaaaatataattaa 14311318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 16081754 - 16081842
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| || |||||||||| | ||||  |||||||||    
T  16081754 tatagtttagggatgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaa 16081842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 48247678 - 48247590
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||  | |||||||||| | ||||| |||||||||    
T  48247678 tatactttagggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 48247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 26048374 - 26048494
Alignment:
Q  25 ggagataggactaaaactgcnnnnnnntatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagta 124  Q
    ||||||| ||||||||||||       ||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||| || |||| ||||| |    
T  26048374 ggagatatgactaaaactgcaaaaacatatagtttaaggacaattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaagga 26048473  T
Q  125 gcaaaaatgtaattaaaccat 145  Q
     ||||| ||||||||| ||||    
T  26048474 acaaaagtgtaattaagccat 26048494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 26026408 - 26026318
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaac 142  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| | || ||||| |||| | ||||| |||||||||||    
T  26026408 tatagtttatggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaaac 26026318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 5334274 - 5334362
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| || ||||||  || | ||||| |||||||||    
T  5334274 tatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 5334362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 5746096 - 5746183
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| ||||| |||| |||||||||||||||| || | ||||||||||||||||| |||||||||| | ||||| |||||||||    
T  5746096 tatagtttatggacggttttgttcgatttaaaagaggcag-atcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaa 5746183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 34595228 - 34595315
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||||||| |||||||||||||| | ||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  34595228 atagtttagggacgattttgttcgatttaaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 34595315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 25637653 - 25637742
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| ||||||||||    
T  25637653 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 25637742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 2758153 - 2758209
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||| |||||||||||    
T  2758153 tatagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagtt 2758209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 9181623 - 9181535
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  9181623 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 15712456 - 15712368
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  15712456 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 15712368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 4477792 - 4477705
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||||||||||| ||||||||||||  |||||| |||||||| || || |||||| ||| | ||| | |||||||||    
T  4477792 atagtttagggacgattttattcaatttaaaagaggcgggaccattttcgtgaattggtcaaaatgtaaggatcaatagtgtaattaa 4477705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 39136776 - 39136689
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||||||| |||||||| ||||||  || |||| ||||||||| | || |||||||||| | ||||| |||||||||    
T  39136776 atagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaa 39136689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 786873 - 786785
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||  ||||| |||||||||||| ||||| ||||| ||||||||||| || |||||| ||| | ||||| |||||||||    
T  786873 tatagtttaaggaaaattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 786785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 5184484 - 5184428
Alignment:
Q  87 ggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||||||||||||||| || ||||| |||| | ||||||||||||||||||    
T  5184484 ggtaggaccaatttcgtgagttggtcaaaatccaaggaccaaaaatgtaattaaacc 5184428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 7732942 - 7733030
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || ||||| || ||||||||||| || ||||||  || | ||||| |||||||||    
T  7732942 tatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 7733030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 48248047 - 48248135
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||| ||||||| || ||||||  || | ||||| |||||||||    
T  48248047 tatagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 48248135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 11971425 - 11971370
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagt 107  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||    
T  11971425 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagt 11971370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 39136991 - 39137042
Alignment:
Q  55 agtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgag 106  Q
    |||||| |||||||||| |||||||||||||||| ||||||| |||||||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgag 39137042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 9394185 - 9394272
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||| |||| |||||||| ||| ||||||||||| ||| ||||| | || ||||||| || | ||||| |||||||||    
T  9394185 tatagtttagggacggttttgttcgatttgaaaaaggtaggaccatttttgtgagctggtcaaaatgcgag-accaaaagtgtaattaa 9394272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 16917804 - 16917716
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| ||| |||||| |||||||||||| || || ||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  16917804 tatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 16917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 26048048 - 26047992
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||| |||||||||||||||||| || || ||||| |||||||||||    
T  26048048 tatagtttaaggacaattttattcgatttaaaaaagatatgaccattttcgtgagtt 26047992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 27245659 - 27245715
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    |||| |||| |||||||||| |||||||||||| || |||||||| |||||||||||    
T  27245659 tataatttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtt 27245715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 16081389 - 16081302
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||| |||||||||| |||||||||||| || |||||||| || | |||||| || |||||  ||| | ||||| |||||||||    
T  16081389 atagtttaaggacgattttgttcgatttaaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaa 16081302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 28687684 - 28687618
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||| ||||||||| || || ||| |||| ||||||||||| || ||||||    
T  28687684 tatagtttaaggacgattttgttcgatttataaaagatagaaccattttcgtgagttggtcaaaatg 28687618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 5745730 - 5745641
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    ||||||||| | | |||||| |||||||||||| || || ||||| ||||||||||| || ||||||  || | ||||| ||||||||||    
T  5745730 tatagtttaagaaagattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaaa 5745641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 14311742 - 14311798
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    |||||||||  ||||||||| |||||||||||| || |||||||| ||| |||||||    
T  14311742 tatagtttaaagacgattttgttcgatttaaaaaagataggaccatttttgtgagtt 14311798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 49720462 - 49720374
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  49720462 tatactttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 49720374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 51828048 - 51827960
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  51828048 tatagtttagggacgattttgttcgatttaaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 51827960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 46013513 - 46013425
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  46013513 tatactttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 46013425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 16689449 - 16689358
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| || | ||||| ||||||||||||    
T  16689449 tatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgctaggaccaaaactgtaattaaacc 16689358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 32730480 - 32730389
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||  ||||| || |||||||||| | ||||| ||||||||||||    
T  32730480 tatagtttagggacgattttgttcaatttaaaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaaacc 32730389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 41998689 - 41998771
Alignment:
Q  58 ttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||| | ||||| |||||||||    
T  41998689 ttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 41998771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 49952003 - 49952089
Alignment:
Q  54 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||  ||||||||| |||||||||||||||||| ||||||||||||||||| || |||||||||| | |||||||||||||||    
T  49952003 tagtttaatgacgattttgttcgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 49952089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 40839107 - 40839199
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacca 144  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| || ||||||  || | ||||| |||||||||||||    
T  40839107 tatagtttagggacgattttgttcgatttaaaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaaacca 40839199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 14654645 - 14654732
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||| |||||||||| |||||||||||||||||||  ||||||||||||||| || |||||||||| | ||||| |||||||||    
T  14654645 atagtttacggacgattttgttcgatttaaaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 14654732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 43678739 - 43678833
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccatt 146  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||  | |||||||||| | ||||| ||||||||| |||||    
T  43678739 tatagtttatggacgattttgttcgatttaaaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccatt 43678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 30513802 - 30513725
Alignment:
Q  63 gacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||||| || |||||||| ||||||||||| || |||||||||| | |||||||||||||||    
T  30513802 gacgattttattcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaa 30513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 34105105 - 34105190
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaat 137  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| ||||| |||| || |||||||||| | ||||| ||||||    
T  34105105 tatagtttagggacgattttgttcgatttaaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 40275181 - 40275089
Alignment:
Q  55 agtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccattt 147  Q
    ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| || ||||||  || | ||||| ||||||||| ||||||    
T  40275181 agtttagggacaattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccattt 40275089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 44676563 - 44676475
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||| |||| |||||||||||||||||| || ||||||| |||||| || |||||||||| | ||||| |||||||||    
T  44676563 tatagtttagggacggttttgttcgatttaaaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 44676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 51828630 - 51828542
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||||||||| | || || |||||||||| | ||||| |||||||||    
T  51828630 tatagtttacggacgattttgttcgatttaaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaa 51828542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 52237272 - 52237360
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  52237272 tataatttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 52237360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 52375786 - 52375874
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||| || ||||||| || | ||||| |||||||||    
T  52375786 tatagtttatggacgattttgttcaatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 52375874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 40838743 - 40838652
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||||||||| || ||||||||||||||| ||||| ||||||||||| || ||||||| || | ||||| ||||||||||||    
T  40838743 tatagtttatggacgattttgtttgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaaacc 40838652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 22370687 - 22370598
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaa 141  Q
    |||||||||||||||||||| || | ||||||| ||||||||||| ||||||||||| || ||||||| || | ||||| ||||||||||    
T  22370687 tatagtttagggacgattttgtttggtttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 22370598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 330291 - 330379
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||| || ||||||| || | ||||  |||||||||    
T  330291 tatagtttagggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaa 330379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 38535750 - 38535818
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgca 120  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||| |||| || ||||||||    
T  38535750 tatagtttagggacgattttattcgatttaaaagagatcggactaatttcgtaagttggtcaaaatgca 38535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 40275549 - 40275636
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| || ||||||  || | ||||| |||||||||    
T  40275549 tatagtttagagacgattttgttcgatttaaaagaggtaggacc-atttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 329937 - 329850
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaatta 139  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || |||||| ||| | ||||| ||||||||    
T  329937 tatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 49951637 - 49951546
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| ||||||||||||    
T  49951637 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaacc 49951546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 51473311 - 51473402
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| ||||||||||||    
T  51473311 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaaacc 51473402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 39010151 - 39010078
Alignment:
Q  67 attttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||| |||||||||||||||||| || |||||| ||||||| || |||||||||| | |||||||||||||||    
T  39010151 attttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 39010078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 52236907 - 52236854
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtga 105  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  52236907 tatagtttagggacgattttgttcgatttaaaagaggtatgaccattttcgtga 52236854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 14654290 - 14654202
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||  ||||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  |||| ||||| |||||||||    
T  14654290 tatagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaa 14654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 47431787 - 47431699
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||  ||||||||| |||||||||||||||||| ||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  47431787 tatagtttaaagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 47431699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 52375418 - 52375330
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||| |||||||| || || ||||||  || | ||||| |||||||||    
T  52375418 tatagtttagggacgattttgttcaatttaaaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaa 52375330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 55389696 - 55389640
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||    
T  55389696 tatagtttaaggacgattttgttcgatttaaaaaaggtaggaccattttcgtgagtt 55389640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 55390052 - 55390140
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||| ||||||||| || ||||||||| ||||||||||| |||||||| || || ||||||| || | ||||| |||||||||    
T  55390052 tatagtttagtgacgattttgtttgatttaaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaa 55390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 25534972 - 25534893
Alignment:
Q  61 gggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| || || ||||||| || | ||||| |||||||||    
T  25534972 gggacgattttgttcgatttaaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaa 25534893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 27199793 - 27199702
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||| |||| |||| |||||||| ||||||| | ||||| ||||||||| | || ||||||| || | ||||||||||||||||||    
T  27199793 tatagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaaacc 27199702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 44676927 - 44677018
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||||||||| |||||||||||| || || ||||| ||||||||||| || ||||||  || | ||||| ||||||||||||    
T  44676927 tatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaacc 44677018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 2044362 - 2044274
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| |||| |||||||||| |||||||||||||||||| ||||| |||| |||||| || ||||||| || | ||||| || ||||||    
T  2044362 tataatttatggacgattttgttcgatttaaaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaa 2044274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 2051386 - 2051298
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| | |||||||| |||||||||||| || |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  2051386 tatagtttaagaacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 2051298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 16701247 - 16701335
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| ||||| |||||| || || ||||| ||||||||||| || ||||||  || | |||||||||||||||    
T  16701247 tatagtttaaggacgattttgttcgaattaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 16701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 38535400 - 38535312
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||| |||||| || ||||||  || | ||||| |||||||||    
T  38535400 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaa 38535312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 41998320 - 41998232
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| ||||| ||||| || ||||||  || | ||||| |||||||||    
T  41998320 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaa 41998232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 51472946 - 51472858
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||| ||||||||| ||||| || ||||||||||||||||||  |||||| |||||| || |||||||||| | ||||| | |||||||    
T  51472946 tatactttagggacaattttgtttgatttaaaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaa 51472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 43222848 - 43222897
Alignment:
Q  55 agtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtg 104  Q
    ||||||||||||||||| |||||||||||||||| | ||||| |||||||    
T  43222848 agtttagggacgattttgttcgatttaaaagaggcatgaccattttcgtg 43222897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 49720816 - 49720881
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaat 117  Q
    ||||||||| |||||||||| |||||||||||| || || ||||| ||||||||||| || |||||    
T  49720816 tatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaat 49720881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 43678386 - 43678298
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || || |||||  |||||||||| || ||||||  || | ||||| |||||||||    
T  43678386 tatagtttaaggacgattttgttcgatttaaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 43678298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 46013878 - 46013966
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || ||| |||| ||| | ||||| || ||||||  |||| ||||| |||||||||    
T  46013878 tatagtttaaggacgattttgttcgatttaaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaa 46013966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 36701196 - 36701109
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||| |||||||||| |||||||| ||||||| | || || |||||||||||  | ||||||| || | ||||| |||||||||    
T  36701196 atagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaa 36701109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 36701552 - 36701639
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||| |||||| |||||||| ||||||  | ||||| ||||||||| | || ||||||| || | ||||| |||||||||    
T  36701552 atagtttagggatgattttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 36701639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 37075777 - 37075710
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgc 119  Q
    |||||||||||||||  ||| || ||||| ||||||| ||||||| ||||||||||| || |||||||    
T  37075777 tatagtttagggacgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgc 37075710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 37076131 - 37076217
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||| |||||||| |||||||| |||||||  |||||| ||||||||| |  | ||||||| || | |||||||||||||||    
T  37076131 atagtttagg-acgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaa 37076217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 43222481 - 43222446
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagag 87  Q
    |||||||||||||||||||| |||||||||||||||    
T  43222481 tatagtttagggacgattttgttcgatttaaaagag 43222446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 8874141 - 8874195
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgag 106  Q
    ||||||||||||| | |||| |||||||||||||| | ||||||| |||||||||    
T  8874141 tatagtttagggaaggttttgttcgatttaaaagaagcaggaccattttcgtgag 8874195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 50662867 - 50662933
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    ||||||||| |||||||||| |||||||||||| || || ||| | ||||||||||| || ||||||    
T  50662867 tatagtttaaggacgattttgttcgatttaaaaaagatatgactattttcgtgagtttgtcaaaatg 50662933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 49407884 - 49407799
Alignment:
Q  55 agtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||| |||| ||| |||| ||||||| | ||||| ||||||||| | || ||||||| || | ||||| |||||||||    
T  49407884 agtttagggacggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 49407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 33412609 - 33412697
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||  ||||||  || |||| ||||||||| |  | ||||||| || | ||||| |||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaa 33412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 50900982 - 50901070
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||| |||| ||||||||  |||||| ||| ||| ||| ||||| | || ||||||| || | ||||| |||||||||    
T  50900982 tatagtttagggacggttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 50901070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 5120924 - 5121012
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| || |||||||||| | ||||| |||||||||    
T  5120924 tatagtttagggacgattttgttcgatttaaaagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 5121012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 31574180 - 31574268
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||| || |||||||||| | ||||| |||||||||    
T  31574180 tatagtttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 31574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 25468940 - 25468849
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| || |||||| ||| | ||||| ||||||||||||    
T  25468940 tatagtttagggacgattttgttcgatttaaaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaaacc 25468849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 31073597 - 31073690
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccat 145  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||| | || |||||||||| | ||||| ||||||||| ||||    
T  31073597 tatagtttagggacaattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccat 31073690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 28636410 - 28636286
Alignment:
Q  25 ggagataggactaaaactgcnnnnnnntatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagta 124  Q
    ||||||| ||||||||||||       ||||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||| || ||||| |||  |    
T  28636410 ggagatatgactaaaactgcaaaaacatatagtttaggaacgattttgttcgatttaaaagaagtaagaccaatttcgtgagttggtcaaaatacaatga 28636311  T
Q  125 gcaaaaatgtaattaaaccatttta 149  Q
     ||||||||||||||| ||| ||||    
T  28636310 ccaaaaatgtaattaagccaattta 28636286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 29891171 - 29891083
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||||| |||| |||| ||||||||||||| || ||||||||| ||||||| |||||| ||| | ||||| |||||||||    
T  29891171 tatagtttagggacgcttttgttcggtttaaaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaa 29891083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 5114559 - 5114471
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||||||||||  | ||||||  || | |||||||||||||||    
T  5114559 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaa 5114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 24640640 - 24640696
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 108  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| |||||||||||    
T  24640640 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtt 24640696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 25472468 - 25472556
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||| |||||||||| |||||||||||| || || ||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  25472468 tatagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 25472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 35163642 - 35163730
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| || ||||| ||||||| || |||| ||||||||| | || |||||||  | | ||||| |||||||||    
T  35163642 tatagtttagggacgattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaa 35163730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 30250775 - 30250724
Alignment:
Q  89 taggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  30250775 taggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 30250724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 32836096 - 32836007
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    |||||||||| ||| |||| |||||||| ||||||| ||||||  ||| ||||| | || |||||||||| | ||||| ||||||||||||    
T  32836096 atagtttagg-acggttttgttcgatttgaaagaggcaggaccgtttttgtgagctggtcaaaatgcaaggatcaaaagtgtaattaaacc 32836007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 31073222 - 31073138
Alignment:
Q  64 acgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccatttt 148  Q
    |||||||| |||||||||||| || |||||||| |||| || ||| || |||||  ||| | ||||| ||||||||| |||||||    
T  31073222 acgattttgttcgatttaaaaaagataggaccattttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaagccatttt 31073138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 6853 - 6942
Alignment:
Q  54 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||||||| |||||||||||||| ||| |||||||||||| | || || |||||||||| | |||||  |||||||||||    
T  6853 tagtttaggtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaaacc 6942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 6871 - 6960
Alignment:
Q  54 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||| |||||||| |||||||||||||| ||| |||||||||||| | || || |||||||||| | |||||  |||||||||||    
T  6871 tagtttaggtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaaacc 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 46357 - 46269
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| || ||||||| || | ||||| || ||||||    
T  46357 tatagtttagggatgattttgttcgatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaa 46269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 46723 - 46811
Alignment:
Q  52 tatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||  ||||||||| |||||||||||| |  |||||||| ||||||||||| || ||||||  || | ||||| |||||||||    
T  46723 tatagtttaaagacgattttgttcgatttaaaatatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 46811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 205823 - 205888
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatg 118  Q
    |||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||||| || ||||||    
T  205823 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatg 205888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 210793 - 210880
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaa 140  Q
    |||||||||||||| |||| |||||||| ||||||| ||||||| |||| |||||| || ||||||  || | ||||| |||||||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaa 210880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 205018 - 204928
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||||||| ||||| || ||||| ||||||| |||||||   ||||||| | || ||||| |||| | ||||| ||||||||||||    
T  205018 atagtttagggacaattttgtttgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggaccaaaagtgtaattaaacc 204928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 205448 - 205358
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaacc 143  Q
    ||||||||||||| | ||| |||||||| ||||||| |||||||   ||||||| | || ||||| |||| | ||||| ||||||||||||    
T  205448 atagtttagggacaaatttgttcgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggatcaaaagtgtaattaaacc 205358  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 145
Target Start/End: Original strand, 15554 - 15646
Alignment:
Q  53 atagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtgaaaatgcaagtagcaaaaatgtaattaaaccat 145  Q
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T  15554 atagtttagggacagttttgttcgatttgaaagagtcaggaccattttcgtgagctgatcaaaatgcgagaaccaaaaatctaattaagccat 15646  T

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