View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12093_high_6 (Length: 464)

Name: NF12093_high_6
Description: NF12093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12093_high_6
NF12093_high_6
[»] chr7 (41 HSPs)
chr7 (40-241)||(3061521-3061724)
chr7 (240-459)||(3061259-3061476)
chr7 (240-443)||(29955208-29955416)
chr7 (240-449)||(31098861-31099069)
chr7 (40-241)||(29954188-29954403)
chr7 (101-240)||(22004563-22004704)
chr7 (87-241)||(31097954-31098110)
chr7 (324-459)||(5091763-5091897)
chr7 (101-240)||(7891340-7891481)
chr7 (42-203)||(7890695-7890857)
chr7 (42-203)||(13400666-13400828)
chr7 (324-459)||(32657518-32657651)
chr7 (42-192)||(5090866-5091016)
chr7 (42-203)||(22003463-22003625)
chr7 (334-449)||(3066473-3066587)
chr7 (97-195)||(3600132-3600231)
chr7 (78-203)||(5091023-5091148)
chr7 (78-203)||(20959362-20959487)
chr7 (90-184)||(22004461-22004555)
chr7 (78-203)||(45112702-45112827)
chr7 (105-203)||(13927402-13927501)
chr7 (78-203)||(7884928-7885053)
chr7 (90-184)||(22004270-22004364)
chr7 (90-184)||(7891238-7891332)
chr7 (97-203)||(32656797-32656904)
chr7 (98-184)||(13927128-13927214)
chr7 (97-187)||(32656697-32656787)
chr7 (42-165)||(7889201-7889324)
chr7 (121-224)||(13927271-13927375)
chr7 (42-155)||(32035186-32035299)
chr7 (80-152)||(26161916-26161987)
chr7 (79-156)||(27712689-27712765)
chr7 (87-146)||(3600053-3600112)
chr7 (42-156)||(16718985-16719099)
chr7 (42-156)||(17693195-17693309)
chr7 (40-86)||(31095118-31095164)
chr7 (121-155)||(16719122-16719156)
chr7 (121-155)||(17693332-17693366)
chr7 (121-155)||(27712788-27712822)
chr7 (51-119)||(22004135-22004203)
chr7 (51-127)||(7891099-7891175)
[»] chr1 (44 HSPs)
chr1 (240-459)||(26210848-26211068)
chr1 (324-459)||(45506298-45506432)
chr1 (324-459)||(48959296-48959430)
chr1 (101-240)||(2051911-2052052)
chr1 (324-459)||(2051062-2051196)
chr1 (324-459)||(36870321-36870455)
chr1 (87-206)||(45507226-45507346)
chr1 (87-224)||(45507357-45507495)
chr1 (42-203)||(22194827-22194989)
chr1 (42-203)||(48958517-48958679)
chr1 (42-203)||(2052535-2052697)
chr1 (42-195)||(49791595-49791749)
chr1 (42-203)||(50704538-50704700)
chr1 (42-193)||(22194997-22195149)
chr1 (42-203)||(2585368-2585529)
chr1 (101-240)||(35598001-35598143)
chr1 (42-203)||(45507048-45507210)
chr1 (42-195)||(49791871-49792025)
chr1 (78-203)||(36455211-36455336)
chr1 (90-184)||(39514202-39514296)
chr1 (101-240)||(35597625-35597765)
chr1 (97-203)||(15689394-15689501)
chr1 (97-203)||(48647758-48647865)
chr1 (78-203)||(7476013-7476138)
chr1 (78-203)||(7476574-7476699)
chr1 (78-203)||(9530040-9530165)
chr1 (78-203)||(15689214-15689339)
chr1 (90-184)||(35598151-35598245)
chr1 (78-203)||(42492459-42492584)
chr1 (90-184)||(2052060-2052154)
chr1 (78-203)||(13929106-13929231)
chr1 (42-156)||(2051777-2051891)
chr1 (42-156)||(36871037-36871151)
chr1 (380-448)||(13928496-13928564)
chr1 (90-178)||(35597724-35597810)
chr1 (101-159)||(39514136-39514194)
chr1 (40-88)||(26209153-26209201)
chr1 (79-156)||(49791079-49791155)
chr1 (79-156)||(49791456-49791532)
chr1 (121-155)||(49791022-49791056)
chr1 (121-155)||(49791399-49791433)
chr1 (51-127)||(2052217-2052293)
chr1 (123-155)||(2051720-2051752)
chr1 (123-155)||(36870980-36871012)
[»] chr8 (17 HSPs)
chr8 (240-449)||(18489441-18489649)
chr8 (324-459)||(409384-409518)
chr8 (42-203)||(22732182-22732344)
chr8 (42-203)||(18489883-18490045)
chr8 (42-203)||(37985418-37985580)
chr8 (42-203)||(24011184-24011345)
chr8 (87-241)||(18489694-18489860)
chr8 (42-197)||(24014094-24014250)
chr8 (78-203)||(19958058-19958183)
chr8 (78-203)||(21637051-21637176)
chr8 (42-155)||(18278552-18278665)
chr8 (114-203)||(41377784-41377874)
chr8 (42-138)||(37985586-37985682)
chr8 (79-156)||(410098-410174)
chr8 (40-83)||(18492665-18492708)
chr8 (121-155)||(410041-410075)
chr8 (408-458)||(19958732-19958781)
[»] chr2 (64 HSPs)
chr2 (324-459)||(19820488-19820622)
chr2 (324-459)||(19840709-19840843)
chr2 (99-240)||(40603325-40603468)
chr2 (87-222)||(32287408-32287544)
chr2 (324-459)||(5000596-5000730)
chr2 (101-240)||(13905855-13905997)
chr2 (324-459)||(27999414-27999548)
chr2 (324-459)||(28090148-28090282)
chr2 (324-459)||(28096471-28096605)
chr2 (324-458)||(5012267-5012400)
chr2 (324-449)||(1918674-1918799)
chr2 (101-240)||(26453492-26453633)
chr2 (324-459)||(205037-205171)
chr2 (42-203)||(26452847-26453009)
chr2 (42-203)||(36440076-36440238)
chr2 (324-459)||(42110892-42111026)
chr2 (324-449)||(21590417-21590542)
chr2 (42-203)||(19640858-19641020)
chr2 (42-203)||(19839451-19839613)
chr2 (97-206)||(32287279-32287389)
chr2 (87-224)||(35433093-35433231)
chr2 (42-203)||(40602683-40602845)
chr2 (40-203)||(980449-980613)
chr2 (42-196)||(5001100-5001255)
chr2 (42-196)||(5012770-5012925)
chr2 (42-203)||(42111641-42111803)
chr2 (97-206)||(1925615-1925725)
chr2 (90-184)||(13905753-13905847)
chr2 (78-203)||(19641057-19641182)
chr2 (78-203)||(19839650-19839775)
chr2 (324-459)||(36439412-36439545)
chr2 (78-203)||(180195-180320)
chr2 (78-203)||(979996-980121)
chr2 (78-203)||(1501779-1501904)
chr2 (78-203)||(2444108-2444233)
chr2 (78-203)||(13899085-13899210)
chr2 (90-184)||(13899855-13899949)
chr2 (42-202)||(21591158-21591319)
chr2 (87-206)||(27999626-27999746)
chr2 (87-206)||(28090360-28090480)
chr2 (87-206)||(28096683-28096803)
chr2 (78-203)||(14039702-14039827)
chr2 (90-184)||(26453390-26453484)
chr2 (97-206)||(32287015-32287125)
chr2 (90-184)||(40603226-40603320)
chr2 (120-206)||(32287142-32287229)
chr2 (87-159)||(35433010-35433082)
chr2 (97-178)||(204367-204448)
chr2 (87-159)||(1925514-1925586)
chr2 (121-203)||(980244-980327)
chr2 (330-391)||(13900798-13900859)
chr2 (79-156)||(2296966-2297042)
chr2 (79-156)||(25643727-25643803)
chr2 (79-156)||(6120827-6120903)
chr2 (121-155)||(2297065-2297099)
chr2 (121-155)||(6120926-6120960)
chr2 (121-155)||(25643826-25643860)
chr2 (51-127)||(26453251-26453327)
chr2 (44-88)||(1271945-1271989)
chr2 (97-156)||(13900059-13900121)
chr2 (40-88)||(30915407-30915455)
chr2 (121-155)||(13900144-13900178)
chr2 (51-119)||(13899720-13899788)
chr2 (51-127)||(40603087-40603163)
[»] chr5 (33 HSPs)
chr5 (101-240)||(32672849-32672990)
chr5 (87-224)||(20842299-20842437)
chr5 (87-240)||(20844450-20844604)
chr5 (101-240)||(23179589-23179730)
chr5 (322-449)||(10038933-10039060)
chr5 (42-203)||(23178625-23178787)
chr5 (42-203)||(32671941-32672103)
chr5 (94-206)||(20844704-20844817)
chr5 (40-203)||(23178365-23178529)
chr5 (40-203)||(34757288-34757452)
chr5 (87-206)||(20844941-20845061)
chr5 (42-203)||(10037141-10037303)
chr5 (90-184)||(23179487-23179581)
chr5 (78-203)||(12651281-12651406)
chr5 (78-203)||(39874161-39874286)
chr5 (87-199)||(20842448-20842561)
chr5 (97-203)||(23180083-23180190)
chr5 (97-203)||(23184351-23184458)
chr5 (90-184)||(23179296-23179390)
chr5 (87-201)||(20845090-20845205)
chr5 (97-184)||(32672754-32672841)
chr5 (330-391)||(20108393-20108454)
chr5 (90-154)||(30094369-30094433)
chr5 (97-156)||(3611844-3611903)
chr5 (97-156)||(20109130-20109189)
chr5 (97-156)||(20109898-20109957)
chr5 (324-391)||(3611110-3611173)
chr5 (324-391)||(30093634-30093697)
chr5 (121-155)||(3611787-3611821)
chr5 (121-155)||(30094310-30094344)
chr5 (121-155)||(20109073-20109107)
chr5 (121-155)||(20109708-20109742)
chr5 (121-155)||(20109841-20109875)
[»] chr4 (44 HSPs)
chr4 (101-240)||(41861876-41862017)
chr4 (324-449)||(42345967-42346092)
chr4 (101-240)||(52680317-52680458)
chr4 (324-459)||(14147706-14147840)
chr4 (42-203)||(16905788-16905950)
chr4 (42-203)||(52679693-52679855)
chr4 (42-192)||(53285595-53285745)
chr4 (42-203)||(21380272-21380434)
chr4 (78-203)||(35756412-35756537)
chr4 (78-203)||(42345227-42345352)
chr4 (42-203)||(41863127-41863289)
chr4 (324-459)||(53286495-53286629)
chr4 (78-203)||(29363490-29363615)
chr4 (90-184)||(41862207-41862301)
chr4 (44-192)||(42345071-42345220)
chr4 (42-203)||(22673246-22673408)
chr4 (121-240)||(41946424-41946546)
chr4 (90-184)||(22673789-22673883)
chr4 (78-203)||(28380247-28380372)
chr4 (78-192)||(29363829-29363943)
chr4 (101-184)||(41862025-41862108)
chr4 (101-184)||(41862116-41862199)
chr4 (90-184)||(52680215-52680309)
chr4 (78-203)||(53285752-53285877)
chr4 (90-184)||(41946724-41946820)
chr4 (78-192)||(29363708-29363822)
chr4 (97-203)||(30390791-30390898)
chr4 (101-184)||(41946633-41946716)
chr4 (101-178)||(22673893-22673970)
chr4 (90-184)||(41862398-41862492)
chr4 (101-180)||(41946546-41946625)
chr4 (79-156)||(14148570-14148646)
chr4 (79-156)||(14148424-14148500)
chr4 (400-459)||(29362826-29362884)
chr4 (79-156)||(19518506-19518582)
chr4 (79-156)||(21585322-21585398)
chr4 (79-156)||(25819673-25819749)
chr4 (47-127)||(22673646-22673726)
chr4 (121-155)||(14148513-14148547)
chr4 (121-155)||(19518449-19518483)
chr4 (121-155)||(21585265-21585299)
chr4 (121-155)||(25819772-25819806)
chr4 (51-127)||(52680076-52680152)
chr4 (78-131)||(29363649-29363701)
[»] chr3 (62 HSPs)
chr3 (322-459)||(11824682-11824818)
chr3 (324-459)||(31484341-31484475)
chr3 (324-459)||(33005279-33005413)
chr3 (324-459)||(36090230-36090364)
chr3 (324-449)||(857499-857624)
chr3 (101-240)||(36093810-36093951)
chr3 (324-449)||(43508935-43509060)
chr3 (87-206)||(6953263-6953383)
chr3 (87-206)||(36947836-36947956)
chr3 (101-240)||(18199401-18199543)
chr3 (42-203)||(35713093-35713255)
chr3 (42-203)||(47724504-47724666)
chr3 (101-240)||(26949097-26949238)
chr3 (324-459)||(35713870-35714004)
chr3 (324-459)||(49565214-49565348)
chr3 (42-203)||(49565968-49566130)
chr3 (97-206)||(6953784-6953894)
chr3 (101-206)||(36947975-36948081)
chr3 (87-206)||(6953402-6953522)
chr3 (87-206)||(6953645-6953765)
chr3 (42-203)||(11823906-11824068)
chr3 (42-203)||(36094887-36095049)
chr3 (42-203)||(43509675-43509837)
chr3 (87-199)||(36947704-36947817)
chr3 (87-204)||(855069-855187)
chr3 (90-184)||(18199299-18199393)
chr3 (90-184)||(36093959-36094053)
chr3 (8-203)||(851176-851366)
chr3 (97-203)||(31483608-31483715)
chr3 (42-203)||(33006030-33006191)
chr3 (42-203)||(35860505-35860667)
chr3 (42-203)||(36095102-36095264)
chr3 (78-203)||(1883316-1883441)
chr3 (78-203)||(26943925-26944050)
chr3 (90-184)||(36094150-36094244)
chr3 (44-203)||(26942979-26943139)
chr3 (97-192)||(18199127-18199223)
chr3 (78-203)||(36090981-36091106)
chr3 (87-195)||(36947569-36947678)
chr3 (120-206)||(6953541-6953628)
chr3 (97-184)||(26943657-26943744)
chr3 (87-192)||(18256760-18256866)
chr3 (35-169)||(52419531-52419677)
chr3 (122-224)||(854955-855058)
chr3 (101-203)||(38662116-38662219)
chr3 (40-178)||(38662177-38662314)
chr3 (78-151)||(18256681-18256753)
chr3 (79-156)||(17657165-17657241)
chr3 (90-154)||(16647453-16647517)
chr3 (97-156)||(13458625-13458684)
chr3 (122-184)||(26949027-26949089)
chr3 (79-156)||(4585523-4585599)
chr3 (97-156)||(12257890-12257949)
chr3 (324-391)||(13457891-13457954)
chr3 (324-391)||(16648189-16648252)
chr3 (121-155)||(4585622-4585656)
chr3 (121-155)||(12257972-12258006)
chr3 (121-155)||(13458568-13458602)
chr3 (121-155)||(16647542-16647576)
chr3 (42-119)||(35860375-35860452)
chr3 (51-119)||(36094309-36094377)
chr3 (87-119)||(851166-851198)
[»] chr6 (12 HSPs)
chr6 (90-240)||(3589246-3589399)
chr6 (324-449)||(24457231-24457356)
chr6 (328-459)||(29370906-29371036)
chr6 (42-203)||(29374211-29374373)
chr6 (42-203)||(29371659-29371821)
chr6 (40-203)||(33049693-33049857)
chr6 (324-459)||(29373461-29373595)
chr6 (78-196)||(2271841-2271959)
chr6 (78-203)||(24456418-24456543)
chr6 (42-203)||(33007258-33007419)
chr6 (391-459)||(33006539-33006606)
chr6 (79-156)||(29921016-29921092)
[»] scaffold0121 (5 HSPs)
scaffold0121 (101-240)||(41380-41521)
scaffold0121 (42-203)||(40777-40939)
scaffold0121 (90-184)||(41187-41281)
scaffold0121 (101-184)||(41289-41372)
scaffold0121 (51-119)||(41047-41115)
[»] scaffold0160 (4 HSPs)
scaffold0160 (324-463)||(37161-37299)
scaffold0160 (87-224)||(36076-36214)
scaffold0160 (87-224)||(36225-36362)
scaffold0160 (87-159)||(36373-36445)
[»] scaffold0374 (3 HSPs)
scaffold0374 (324-459)||(891-1025)
scaffold0374 (79-156)||(107-183)
scaffold0374 (121-155)||(50-84)
[»] scaffold0097 (3 HSPs)
scaffold0097 (78-203)||(44606-44731)
scaffold0097 (42-131)||(48739-48828)
scaffold0097 (51-119)||(51517-51585)
[»] scaffold1113 (1 HSPs)
scaffold1113 (97-203)||(2450-2557)
[»] scaffold0642 (2 HSPs)
scaffold0642 (79-156)||(293-369)
scaffold0642 (121-155)||(392-426)
[»] scaffold0345 (2 HSPs)
scaffold0345 (79-156)||(10204-10280)
scaffold0345 (121-155)||(10303-10337)
[»] scaffold0105 (2 HSPs)
scaffold0105 (79-156)||(28700-28776)
scaffold0105 (121-155)||(28643-28677)
[»] scaffold0119 (2 HSPs)
scaffold0119 (44-88)||(29248-29292)
scaffold0119 (44-88)||(35501-35545)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 4e-85; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 3061724 - 3061521
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctc 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  3061724 tctcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccactttttcctccttcaaaacctaaccatatttcctaattcccctc 3061625  T
Q  140 ctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccatatttctagttgccata-ttttttcctcacttcctca 237  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||| |||||| ||||||||||||    
T  3061624 ctccaaaccctaaccatgatctcctaatttccctcctcctaaaacctatctaattgatttccatattttctgttgccatattttttttctcacttcctca 3061525  T
Q  238 actg 241  Q
    ||||    
T  3061524 actg 3061521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 240 - 459
Target Start/End: Complemental strand, 3061476 - 3061259
Alignment:
Q  240 tgtcaattttaaatttcgtttgtcacagtgatgattatactatatnnnnnnnnccatagcattgtaccaataaaatgttatagtaaagcgattcgtgact 339  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||        ||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  3061476 tgtcaatttgaaatttcgtttgtcacagtgaagattatactatataaaaaaa-ccataacattgtactaataaaatgttatagtaaagcgattcgagact 3061378  T
Q  340 tttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttcgcaagagtatccccta 439  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  3061377 tttaaggaatcggttttggtgcctggattaccttggattttgtgggtgacgaacagtttgatataccgttgattgataggtttcacaagagtatccccta 3061278  T
Q  440 cccggttttttgatccccct 459  Q
    || |||||||| ||||||||    
T  3061277 cctggtttttt-atccccct 3061259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 240 - 443
Target Start/End: Original strand, 29955208 - 29955416
Alignment:
Q  240 tgtcaattttaaatttcgtttgtcacagtgatgattatactata-----tnnnnnnnnccatagcattgtaccaataaaatgttatagtaaagcgattcg 334  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||     |        ||||||| |||||| |||||||||||||||||||||||||||    
T  29955208 tgtcaatttcaaatttcgtttgtcacagtaatgattatactatactatataaaaaaaaccatagcgttgtactaataaaatgttatagtaaagcgattcg 29955307  T
Q  335 tgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttcgcaagagtatc 434  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  29955308 tgacttttacggaatcggtcttggtgcttggattatcttggtttttgtgggtgacggacagtttgatatacggttgactgataggtttcacaagaatatc 29955407  T
Q  435 ccctacccg 443  Q
    |||||||||    
T  29955408 ccctacccg 29955416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 240 - 449
Target Start/End: Original strand, 31098861 - 31099069
Alignment:
Q  240 tgtcaattttaaatttcgtttgtcacagtgatgattatactatatnnnnnnnnccatagcattgtaccaataaaatgttatagtaaagcgattcgtgact 339  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||        ||||||  || | | ||||||||||||||||||||||||||||||||    
T  31098861 tgtcaatttcaaatttcgtttgtcacagtcatgattatactatataaaaaaa-ccatagtgttatcctaataaaatgttatagtaaagcgattcgtgact 31098959  T
Q  340 tttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttcgcaagagtatccccta 439  Q
    ||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  31098960 tttacagaatcggtcttggtgcctagattaccttggtttttgtgggtgacagacagtttgatatacggttgactgataggtttcacaagagtatcccata 31099059  T
Q  440 cccggttttt 449  Q
    ||||| ||||    
T  31099060 cccggctttt 31099069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 40 - 241
Target Start/End: Original strand, 29954188 - 29954403
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt------------gtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||            ||||||| ||||||||||||||||||||||| |||||||    
T  29954188 tctcttattcttaaacaaagcattgtcgtcctaattatacctaatattttaacctaaaattgtagccacttttccctccttcaaaacctaaccatatttc 29954287  T
Q  128 ctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccatatttctagttgccatat-tttttc 225  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||| |||| ||||||    
T  29954288 ataactcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaacctatctaattgatttccatattttctgttgctatatatttttc 29954387  T
Q  226 ctcacttcctcaactg 241  Q
    ||||||||||||||||    
T  29954388 ctcacttcctcaactg 29954403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 22004563 - 22004704
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22004563 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 22004662  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  22004663 catattttctgttgccatatttttttcctcacttcctcaact 22004704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 87 - 241
Target Start/End: Original strand, 31097954 - 31098110
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  31097954 ttgtagccattttttcctccttcaaaacctaaccatatttcttaactcccctcctccaaaccctaactatgatctcctaatttccctcctcctaaaacct 31098053  T
Q  186 atctaattgatttccatatttctagttgccata-ttttttcctcacttcctcaactg 241  Q
    |||||||||||||||||||||   || |||||| |||||||||||||||||||||||    
T  31098054 atctaattgatttccatattttatgtagccatatttttttcctcacttcctcaactg 31098110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 5091763 - 5091897
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  5091763 aaagcgattcgtgacttttacggaatcgatcttggtgcctgaattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 5091862  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||||||||||| ||||||||||||||    
T  5091863 acaagagtatcccctacccgg-tttttgatccccct 5091897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 7891340 - 7891481
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  7891340 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 7891439  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||| ||||||||||||||    
T  7891440 catattttctgttgccatatttttttcttcacttcctcaact 7891481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 7890695 - 7890857
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  7890695 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 7890793  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  7890794 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 7890857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 13400828 - 13400666
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  13400828 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 13400730  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  13400729 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 13400666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 32657518 - 32657651
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  32657518 aaagcgattcgtgacttttacggaatcgatcttggtgcctaaattaccttggtttttgttggtgacggacagtttgatacacagttgactgataggtttc 32657617  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||||||||||  ||||||||||||||    
T  32657618 acaagagtatcccctacccg--tttttgatccccct 32657651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 5090866 - 5091016
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  5090866 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tatcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 5090964  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaactatctaat 192  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  5090965 tccaaaccctaaccatgatttcctaatttcactcctcctaaacctatctaat 5091016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 22003463 - 22003625
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  22003463 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcc 22003561  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  22003562 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 22003625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 334 - 449
Target Start/End: Complemental strand, 3066587 - 3066473
Alignment:
Q  334 gtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttcgcaagagtat 433  Q
    ||||||||||  |||||||||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  3066587 gtgacttttaccgaatcggtcttggtgt-tggattaccttgatttttgtgggtgacagacagtttgatataccgttgactgataggtttcacaagagtat 3066489  T
Q  434 cccctacccggttttt 449  Q
    ||||||||||||||||    
T  3066488 cccctacccggttttt 3066473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 3600231 - 3600132
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  3600231 ttttccctccttcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattga 3600132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 5091023 - 5091148
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  5091023 acctaatattt-tagcaactttttcctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 5091121  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  5091122 ctaaaacctatctaattgatttccata 5091148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 20959487 - 20959362
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  20959487 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 20959389  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||| ||||    
T  20959388 ctaaaacctatctaattgattttcata 20959362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 22004461 - 22004555
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22004461 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 22004555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 45112702 - 45112827
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  45112702 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 45112800  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||| ||||    
T  45112801 ctaaaacctatctaattgattttcata 45112827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 13927402 - 13927501
Alignment:
Q  105 ccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-tatctaattgatttccata 203  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  13927402 ccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacttacctaattgatttccata 13927501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 7884928 - 7885053
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  7884928 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 7885026  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  7885027 ctaaaacctatctaattgatttccata 7885053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 22004270 - 22004364
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22004270 tagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 22004364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 7891238 - 7891332
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7891238 tagctatttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 7891332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 32656797 - 32656904
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  32656797 ttttccctcattcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 32656896  T
Q  196 tttccata 203  Q
    ||||||||    
T  32656897 tttccata 32656904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 13927128 - 13927214
Alignment:
Q  98 tttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||| |||||||    
T  13927128 tttccctccttcaaaacctaactatatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctcctgctaaaac 13927214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 32656697 - 32656787
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaactat 187  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  32656697 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaactat 32656787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 42 - 165
Target Start/End: Complemental strand, 7889324 - 7889201
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||  ||||||||||  ||| ||||||||| || ||||||||||  ||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  7889324 tcttatttctaaacaaagctttgttgccctaattttaacctaatatttc-agcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 7889226  T
Q  141 tccaaaccctaaccatgatctccta 165  Q
    ||||||||||||||||||| |||||    
T  7889225 tccaaaccctaaccatgatttccta 7889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 13927271 - 13927375
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccatatttctagttgccatat 219  Q
    ||||||||||||| |||||||||||||| |||||||||| |||||||||||||| | |||||| ||| |||||||||||||||||||    |||||||||    
T  13927271 atatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctcatgctaaaacctacctaattgatttccatattttcttttgccatat 13927370  T
Q  220 ttttt 224  Q
    |||||    
T  13927371 ttttt 13927375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 32035186 - 32035299
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||  |||||||||||||    
T  32035186 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattctctaattcccctcc 32035284  T
Q  141 tccaaaccctaacca 155  Q
    |||||||||| ||||    
T  32035285 tccaaaccctcacca 32035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 26161916 - 26161987
Alignment:
Q  80 ctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaa 152  Q
    ||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26161916 ctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaa 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 27712689 - 27712765
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  27712689 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 27712765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 3600112 - 3600053
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaa 146  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  3600112 ttgtagccacttttccttccttcaaaacctaaccatatttcctaattcccctcctccaaa 3600053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 16718985 - 16719099
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| |||||    
T  16718985 tcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcc 16719083  T
Q  141 tccaaaccctaaccat 156  Q
    |||||||| |||||||    
T  16719084 tccaaaccttaaccat 16719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 17693195 - 17693309
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| |||||    
T  17693195 tcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcc 17693293  T
Q  141 tccaaaccctaaccat 156  Q
    |||||||| |||||||    
T  17693294 tccaaaccttaaccat 17693309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 31095118 - 31095164
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatat 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31095118 tctcttattcttaaacaaagcactgtcgccctaattatacctaatat 31095164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 16719122 - 16719156
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  16719122 atatttcctaattcccctcctccaaaccctaacca 16719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 17693332 - 17693366
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  17693332 atatttcctaattcccctcctccaaaccctaacca 17693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 27712788 - 27712822
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  27712788 atatttcctaattcccctcctccaaaccctaacca 27712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 22004135 - 22004203
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| |||||||||||||||||||||||||    
T  22004135 taaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaac 22004203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 7891099 - 7891175
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  7891099 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 7891175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 9e-68; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 240 - 459
Target Start/End: Original strand, 26210848 - 26211068
Alignment:
Q  240 tgtcaattttaaatttcgtttgtcacagtgatgattatactatatnnnnnnnn--ccatagcattgtaccaataaaatgttatagtaaagcgattcgtga 337  Q
    ||||||||| |||||||||||||||||||||||||||||||||||          ||||||| |||||| ||||||||||||||||||||||||||||||    
T  26210848 tgtcaatttcaaatttcgtttgtcacagtgatgattatactatataaaaaaaaaaccatagcgttgtactaataaaatgttatagtaaagcgattcgtga 26210947  T
Q  338 cttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttcgcaagagtatcccc 437  Q
     ||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||     
T  26210948 attttacggaatcggtcttggtacctggattatcttggtttttatgggtgacggacagtttgatatacggttgactgataggtttcacaagagtatccct 26211047  T
Q  438 tacccggttttttgatccccct 459  Q
    |||||||  |||||||||||||    
T  26211048 tacccgg-cttttgatccccct 26211068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 45506432 - 45506298
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  45506432 aaagcgattcgtgacttttacggaatcgatcttggtgcctgaattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 45506333  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||||||||| |||||||||||||    
T  45506332 acaagagtatcccctacccggt-ttttgatccccct 45506298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 48959296 - 48959430
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  48959296 aaagcgattcgtgacttttacggaatcgatcttggtgcctgaattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 48959395  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||||||||||| ||||||||||||||    
T  48959396 acaagagtatcccctacccgg-tttttgatccccct 48959430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 101 - 240
Target Start/End: Complemental strand, 2052052 - 2051911
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  2052052 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 2051953  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  2051952 catattttctgttgccatatttttttcctcacttcctcaact 2051911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 2051196 - 2051062
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  2051196 aaagcgattcgtgacttttacggaatcgatcttggtgcccggattaccttggtttttgtgggtgacggacagtttgatatacacttgactgataggtttc 2051097  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||| ||||||||||||||| |||||||||||||    
T  2051096 acaagaatatcccctacccggt-ttttgatccccct 2051062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 36870455 - 36870321
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  36870455 aaagcgattcgtgacttttacggaatcgatcttggtgcccggattaccttggtttttgtgggtgacggacagtttgatatacacttgactgataggtttc 36870356  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||| ||||||||||||||| |||||||||||||    
T  36870355 acaagaatatcccctacccggt-ttttgatccccct 36870321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 45507346 - 45507226
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  45507346 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 45507247  T
Q  186 atctaattgatttccatattt 206  Q
    | |||||||||||||||||||    
T  45507246 acctaattgatttccatattt 45507226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 87 - 224
Target Start/End: Complemental strand, 45507495 - 45507357
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  45507495 ttgtagccatttttcctttcttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 45507396  T
Q  186 atctaattgatttccatatttctagttgccatatttttt 224  Q
    | |||||||||||||||||||    ||||||||||||||    
T  45507395 acctaattgatttccatattttcttttgccatatttttt 45507357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 22194827 - 22194989
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  22194827 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 22194925  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||| |||||||    
T  22194926 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgaattccata 22194989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 48958517 - 48958679
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  48958517 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 48958615  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  48958616 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 48958679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 2052697 - 2052535
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||| |||||| ||||||    
T  2052697 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattttctaatttccctcc 2052599  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||||||||||||||| || |||||| ||| |||||||||||| ||||||||||||||||||||    
T  2052598 tccaaaccctaaccataatttcctaacttcactcctcctaaaacctatctaattgatttccata 2052535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 49791749 - 49791595
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||| |||     
T  49791749 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacgatatttcctaattcctctct 49791651  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  49791650 tccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattga 49791595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 50704538 - 50704700
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  50704538 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 50704636  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||| ||||||||||| |||||| ||| |||||||||||| ||||||||||||||| ||||    
T  50704637 tccaaactctaaccatgatttcctaacttcactcctcctaaaacctatctaattgattttcata 50704700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 22194997 - 22195149
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  22194997 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 22195095  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaatt 193  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||    
T  22195096 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaatt 22195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 2585368 - 2585529
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    ||||||||| |||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2585368 tcttattct-aaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 2585465  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    || |||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  2585466 tctaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 2585529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 101 - 240
Target Start/End: Complemental strand, 35598143 - 35598001
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  35598143 ccctccttcaaaacctaagcatgtttcctaatttccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaacctatctaattgatttc 35598044  T
Q  200 catatttctagttgccat--attttttcctcacttcctcaact 240  Q
    |||||||   ||||||||   ||||||||||||||||||||||    
T  35598043 catattttctgttgccattatttttttcctcacttcctcaact 35598001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 45507210 - 45507048
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||| | ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||| |||    
T  45507210 tcttatacctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccttcc 45507112  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  45507111 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 45507048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 49792025 - 49791871
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||| |||     
T  49792025 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacgatatttcctaattcctctct 49791927  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaac-tatctaattga 195  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||||||||||    
T  49791926 tccaaaccctaaccatgattttctaatttccctcctcctaaaacatatctaattga 49791871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 36455211 - 36455336
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  36455211 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 36455309  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||| ||||    
T  36455310 ctaaaacctatctaattgattttcata 36455336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 39514296 - 39514202
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39514296 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 39514202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 101 - 240
Target Start/End: Complemental strand, 35597765 - 35597625
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||| |||| |||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  35597765 ccctcctccaaaccctaaccatatttcctaattccc-tcctccaaatcctaaccatgatttcctaattttcctcctcctaaaacctatctaattgatttc 35597667  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  35597666 catattttctgttgccatatttttttcctcacttcctcaact 35597625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 15689394 - 15689501
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  15689394 ttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 15689493  T
Q  196 tttccata 203  Q
    ||||||||    
T  15689494 tttccata 15689501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 48647758 - 48647865
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  48647758 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 48647857  T
Q  196 tttccata 203  Q
    ||| ||||    
T  48647858 ttttcata 48647865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 7476013 - 7476138
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  7476013 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 7476111  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  7476112 ctaaaacctatctaattgatttccata 7476138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 7476574 - 7476699
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  7476574 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 7476672  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  7476673 ctaaaacctatctaattgatttccata 7476699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 9530040 - 9530165
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  9530040 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 9530138  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  9530139 ctaaaacctatctaattgatttccata 9530165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 15689214 - 15689339
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||| ||| ||||||    
T  15689214 acctaatattt-tagcaaattttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaacttcactcctc 15689312  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  15689313 ctaaaacctatctaattgatttccata 15689339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 35598245 - 35598151
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  35598245 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctactaaaac 35598151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 42492459 - 42492584
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  42492459 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 42492557  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  42492558 ctaaaacctatctaattgatttccata 42492584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 2052154 - 2052060
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  2052154 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 2052060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 13929231 - 13929106
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| |||||| ||| ||| ||    
T  13929231 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattaccaaattcccctcctccaaaccctaaccatgatttcctaacttcactcatc 13929133  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  13929132 ctaaaacctatctaattgatttccata 13929106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 2051891 - 2051777
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||    
T  2051891 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcc 2051793  T
Q  141 tccaaaccctaaccat 156  Q
    ||||||||||||||||    
T  2051792 tccaaaccctaaccat 2051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 36871151 - 36871037
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||    
T  36871151 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcc 36871053  T
Q  141 tccaaaccctaaccat 156  Q
    ||||||||||||||||    
T  36871052 tccaaaccctaaccat 36871037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 448
Target Start/End: Complemental strand, 13928564 - 13928496
Alignment:
Q  380 tgtgggtgacggacagtttgatataccgttgactgataggtttcgcaagagtatcccctacccggtttt 448  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  13928564 tgtgggtgacggacagtttgatatacagttgactgataggtttcacaagagtatcccctacccgatttt 13928496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 35597810 - 35597724
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcc 178  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||| |||||||||||    
T  35597810 tagccacttttccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccat-atttcctaa-ttccctcctcc 35597724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 39514194 - 39514136
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39514194 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 39514136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 26209153 - 26209201
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26209153 tctcttattcttaaacaaagcattgtcgccctaattatacctaatattt 26209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 49791155 - 49791079
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  49791155 cctaatattt-tagcaacttttccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 49791532 - 49791456
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  49791532 cctaatattt-tagcaacttttccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 49791056 - 49791022
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  49791056 atatttcctaattcccctcctccaaaccctaacca 49791022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 49791433 - 49791399
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  49791433 atatttcctaattcccctcctccaaaccctaacca 49791399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 2052293 - 2052217
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  2052293 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 2052217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 2051752 - 2051720
Alignment:
Q  123 atttcctaattcccctcctccaaaccctaacca 155  Q
    ||||| |||||||||||||||||||||||||||    
T  2051752 atttcataattcccctcctccaaaccctaacca 2051720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 36871012 - 36870980
Alignment:
Q  123 atttcctaattcccctcctccaaaccctaacca 155  Q
    ||||| |||||||||||||||||||||||||||    
T  36871012 atttcataattcccctcctccaaaccctaacca 36870980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 240 - 449
Target Start/End: Complemental strand, 18489649 - 18489441
Alignment:
Q  240 tgtcaattttaaatttcgtttgtcacagtgatgattatactatatnnnnnnnnccatagcattgtaccaataaaatgttatagtaaagcgattcgtgact 339  Q
    ||||||||| | ||||||||||||| |||||||||||||||||||        ||||||  |||||| ||||||||| |||||||||| |||||||||||    
T  18489649 tgtcaatttcatatttcgtttgtcagagtgatgattatactatataaaaaaa-ccatagtgttgtactaataaaatgatatagtaaagtgattcgtgact 18489551  T
Q  340 tttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttcgcaagagtatccccta 439  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  18489550 tttatggaatcggtcttggttcttggattaccttggtttttgtgggtgactgacagtttgatataccgttgactaataggtttcacaagagtatccccta 18489451  T
Q  440 cccggttttt 449  Q
    ||||||||||    
T  18489450 cccggttttt 18489441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 409518 - 409384
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  409518 aaagcgattcgtgacttttacggaatcgatcttggtgcctgaattaccttggtttttgtgggtgacggacagtttgatatacacttgactgataggtttc 409419  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||||| || ||||||||||||||    
T  409418 acaagagtatcccctacctgg-tttttgatccccct 409384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 22732344 - 22732182
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  22732344 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatattccctaattcccctcc 22732246  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  22732245 tccaaaccctaaccatgatttcctaatttcactcctcctaaaacctatctaattgatttccata 22732182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 18489883 - 18490045
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  18489883 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 18489981  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  18489982 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 18490045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 37985580 - 37985418
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || || ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  37985580 tcttattcctaaacaaagctttgttgccctaattttaacttaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcc 37985482  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||| ||||    
T  37985481 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttacata 37985418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 24011345 - 24011184
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcct 141  Q
    |||||||| ||||||||||  ||| |||||||||  ||||||||||| |||| ||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  24011345 tcttattcctaaacaaagctttgttgccctaatttaacctaatattt-tagcaatttttccctccttcaaaatctaaccatatttcataattctcctcct 24011247  T
Q  142 ccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  24011246 ccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 24011184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 87 - 241
Target Start/End: Complemental strand, 18489860 - 18489694
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaac----------catgatctcctaatttccctcct 176  Q
    |||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||          |||||||||||||||||||||||    
T  18489860 ttgtagtcacttttccctccttcaaaacataaccatatttcctaattcccctcctccaaaccctaacaaaccctaaccatgatctcctaatttccctcct 18489761  T
Q  177 cctaaaac-tatctaattgatttccatatttctagttgccata-ttttttcctcacttcctcaactg 241  Q
    |||||||| ||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||    
T  18489760 cctaaaacgtatctaattgatttccatattttctgttgccatatttttttcctcacttcctcaactg 18489694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 24014250 - 24014094
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  24014250 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 24014152  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatt 197  Q
    |||||||||||||||| || |||||| ||| |||||||||||| ||||||||||||||    
T  24014151 tccaaaccctaaccatcatttcctaacttcactcctcctaaaacctatctaattgatt 24014094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 19958058 - 19958183
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||| ||||||    
T  19958058 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgatttcctaacttcactcctc 19958156  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||| ||||    
T  19958157 ctaaaacctatctaattgattttcata 19958183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 21637051 - 21637176
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||||| ||| ||||||    
T  21637051 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcctctcctccaaaccctaaccatgatttcctaacttcactcctc 21637149  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  21637150 ctaaaacctatctaattgatttccata 21637176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 18278665 - 18278552
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  18278665 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 18278567  T
Q  141 tccaaaccctaacca 155  Q
    |||||||||||||||    
T  18278566 tccaaaccctaacca 18278552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 41377874 - 41377784
Alignment:
Q  114 cctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  41377874 cctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 41377784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 37985682 - 37985586
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  37985682 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccct 37985586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 410174 - 410098
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||    
T  410174 cctaatattt-tagcaacttttccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 18492708 - 18492665
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaa 83  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  18492708 tctcttattcttaaacaaagcattatcgccctaattatacctaa 18492665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 410075 - 410041
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  410075 atatttcctaattcccctcctccaaaccctaacca 410041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 458
Target Start/End: Original strand, 19958732 - 19958781
Alignment:
Q  408 ttgactgataggtttcgcaagagtatcccctacccggttttttgatccccc 458  Q
    |||| ||||||||||| |||||||||||||||||||| |||||||||||||    
T  19958732 ttgattgataggtttcacaagagtatcccctacccgg-tttttgatccccc 19958781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 5e-54; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 19820488 - 19820622
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  19820488 aaagcgattcgtgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 19820587  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||||||||||| ||||||||||||||    
T  19820588 acaagagtatcccctacccgg-tttttgatccccct 19820622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 19840709 - 19840843
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  19840709 aaagcgattcgtgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 19840808  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||||||||||| ||||||||||||||    
T  19840809 acaagagtatcccctacccgg-tttttgatccccct 19840843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 99 - 240
Target Start/End: Original strand, 40603325 - 40603468
Alignment:
Q  99 ttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatt 197  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  40603325 ttccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatt 40603424  T
Q  198 tccatatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||||   ||||||||| ||||||||||||||||||||||    
T  40603425 tccatattttctgttgccatatttttttcctcacttcctcaact 40603468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 32287408 - 32287544
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-t 185  Q
    ||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32287408 ttgtaaccacttttccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaactt 32287507  T
Q  186 atctaattgatttccatatttctagttgccatatttt 222  Q
    |||||||||||||||||||||   |||||||||||||    
T  32287508 atctaattgatttccatattttctgttgccatatttt 32287544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 5000730 - 5000596
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  5000730 aaagcgattcgtgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacggacaatttgatatacagttgactgataggtttc 5000631  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||||| || ||||||||||||||    
T  5000630 acaagagtatcccctacctgg-tttttgatccccct 5000596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 13905855 - 13905997
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  13905855 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttcctaatttccctcctcctaaaacctatctaattgatttc 13905954  T
Q  200 catatttctagttgccata--ttttttcctcacttcctcaact 240  Q
    |||||||   |||||||||  ||||||||||||||||||||||    
T  13905955 catattttctgttgccatattttttttcctcacttcctcaact 13905997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 27999548 - 27999414
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  27999548 aaagcgattcgtgacttttacagaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatatacggttgactgataggcttc 27999449  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||| || | ||||||||||||||    
T  27999448 acaagagtatccccta-cctgatttttgatccccct 27999414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 28090282 - 28090148
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  28090282 aaagcgattcgtgacttttacagaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatatacggttgactgataggcttc 28090183  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||| || | ||||||||||||||    
T  28090182 acaagagtatccccta-cctgatttttgatccccct 28090148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 28096605 - 28096471
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  28096605 aaagcgattcgtgacttttacagaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatatacggttgactgataggcttc 28096506  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||| || | ||||||||||||||    
T  28096505 acaagagtatccccta-cctgatttttgatccccct 28096471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 324 - 458
Target Start/End: Complemental strand, 5012400 - 5012267
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  5012400 aaagcgattcgtgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacggacaatttgatatacagttgactgataggtttc 5012301  T
Q  424 gcaagagtatcccctacccggttttttgatccccc 458  Q
     ||||||||||||||||| || |||||||||||||    
T  5012300 acaagagtatcccctacctgg-tttttgatccccc 5012267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 1918799 - 1918674
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  1918799 aaagcgattcgtgacttttacggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacaatttgatatacggttgactgacaggtttc 1918700  T
Q  424 gcaagagtatcccctacccggttttt 449  Q
     ||||||||||| ||||||| |||||    
T  1918699 acaagagtatcctctacccgattttt 1918674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 26453492 - 26453633
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  26453492 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 26453591  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||| | ||||||||||||||||||||||    
T  26453592 catattttctgttgccacatttttttcctcacttcctcaact 26453633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 205037 - 205171
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||    
T  205037 aaagcgattcgtgacttttacggaatcgatcttggtgcctgaattaccttggtttttgttggtgacggacagttagatacacagttgactgataggtttc 205136  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||||||||||| ||||||||||||||    
T  205137 acaagagtatcccctacccgg-tttttgatccccct 205171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 26452847 - 26453009
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  26452847 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 26452945  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  26452946 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 26453009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 36440238 - 36440076
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  36440238 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaactatatttcctaattcccctcc 36440140  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  36440139 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 36440076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 42111026 - 42110892
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  42111026 aaagcgattcttgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 42110927  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     || |||||||||||||| || ||||||||||||||    
T  42110926 acacgagtatcccctacctgg-tttttgatccccct 42110892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 21590542 - 21590417
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    ||||||||| ||||||||||  |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21590542 aaagcgatttgtgacttttacagaatcgatcttggtgcctgaattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 21590443  T
Q  424 gcaagagtatcccctacccggttttt 449  Q
     |||||||||||||||||||||||||    
T  21590442 acaagagtatcccctacccggttttt 21590417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 19640858 - 19641020
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  19640858 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 19640956  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||| |||||||    
T  19640957 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgaattccata 19641020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 19839451 - 19839613
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  19839451 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 19839549  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||| |||||||    
T  19839550 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgaattccata 19839613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 32287279 - 32287389
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  32287279 ttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcctaaaacctatctaattga 32287378  T
Q  196 tttccatattt 206  Q
    |||||||||||    
T  32287379 tttccatattt 32287389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 87 - 224
Target Start/End: Complemental strand, 35433231 - 35433093
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  35433231 ttgtagccacttttccctccttcaaaacctaaccatatttcttaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 35433132  T
Q  186 atctaattgatttccatatttctagttgccatatttttt 224  Q
    | ||||||||||| |||||||    ||||||||||||||    
T  35433131 acctaattgattttcatattttcttttgccatatttttt 35433093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 40602683 - 40602845
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||| ||||| |||||| |||||| ||||||    
T  40602683 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaatctaaccatattttctaatttccctcc 40602781  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  40602782 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 40602845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 980613 - 980449
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  980613 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 980515  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||||||||||    
T  980514 cctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccata 980449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 5001255 - 5001100
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  5001255 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccttatttcctaattcccctcc 5001157  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  5001156 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 5001100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 5012925 - 5012770
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  5012925 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccttatttcctaattcccctcc 5012827  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgat 196  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||    
T  5012826 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgat 5012770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 42111803 - 42111641
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | | ||||||||||||||||||||||| |||||| |||||||||||||    
T  42111803 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-taacaacttttccctccttcaaaacctaaccatattttctaattcccctcc 42111705  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||||||||||||||| || |||||| ||| |||||||||||| ||||||||||||||||||||    
T  42111704 tccaaaccctaaccatcatttcctaacttcactcctcctaaaacctatctaattgatttccata 42111641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 1925725 - 1925615
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||    
T  1925725 ttttccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccattatttcctaatttccctcctcctaaaacctacctaattga 1925626  T
Q  196 tttccatattt 206  Q
    |||||||||||    
T  1925625 tttccatattt 1925615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 13905753 - 13905847
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13905753 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 13905847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 19641057 - 19641182
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  19641057 acctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaacttcactcctc 19641155  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
     ||||| ||||||||||||||||||||    
T  19641156 ataaaacctatctaattgatttccata 19641182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 19839650 - 19839775
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  19839650 acctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaacttcactcctc 19839748  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
     ||||| ||||||||||||||||||||    
T  19839749 ataaaacctatctaattgatttccata 19839775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 36439545 - 36439412
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||||    
T  36439545 aaagtgattcgtgacttttacggaatcgatcttggtgcctgaattaccttggtttttgttggtgacagacagtttgatatatagttgactgataggtttc 36439446  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||| ||||||| || ||||||||||||||    
T  36439445 acaagagtat-ccctacctgg-tttttgatccccct 36439412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 180195 - 180320
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  180195 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 180293  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  180294 ctaaaacctatctaattgatttccata 180320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 980121 - 979996
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  980121 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 980023  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  980022 ctaaaacctatctaattgatttccata 979996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 1501779 - 1501904
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||| ||| ||||||    
T  1501779 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacaatgattttctaacttcactcctc 1501877  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  1501878 ctaaaacctatctaattgatttccata 1501904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 2444108 - 2444233
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  2444108 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 2444206  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  2444207 ctaaaacctatctaattgatttccata 2444233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 13899085 - 13899210
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||    
T  13899085 acctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctc 13899183  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  13899184 ctaaaacctatctaattgatttccata 13899210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 13899855 - 13899949
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13899855 tagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 13899949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 21591319 - 21591158
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||  |||||||||||||    
T  21591319 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattctctaattcccctcc 21591221  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccat 202  Q
    | |||| |||||||||||| |||||| ||| |||||||||||| |||||||||||||||||||    
T  21591220 ttcaaagcctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccat 21591158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 27999746 - 27999626
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||    
T  27999746 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacct 27999647  T
Q  186 atctaattgatttccatattt 206  Q
    | |||||||||||||||||||    
T  27999646 acctaattgatttccatattt 27999626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 28090480 - 28090360
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||    
T  28090480 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacct 28090381  T
Q  186 atctaattgatttccatattt 206  Q
    | |||||||||||||||||||    
T  28090380 acctaattgatttccatattt 28090360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 28096803 - 28096683
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||    
T  28096803 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaacct 28096704  T
Q  186 atctaattgatttccatattt 206  Q
    | |||||||||||||||||||    
T  28096703 acctaattgatttccatattt 28096683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 14039702 - 14039827
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||    
T  14039702 acctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaacaatgatttcctaacttcactcctc 14039800  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  14039801 ctaaaacctatctaattgatttccata 14039827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 26453390 - 26453484
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  26453390 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 26453484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 32287015 - 32287125
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    |||||||||||| |||||||||| | ||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  32287015 ttttccctcctttaaaacctaactacatttcctgattcctctcctccaaaccctaaccatgattttctaatttccctcctcctaaaacctatctaattga 32287114  T
Q  196 tttccatattt 206  Q
    |||||||||||    
T  32287115 tttccatattt 32287125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 40603226 - 40603320
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  40603226 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 40603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 32287142 - 32287229
Alignment:
Q  120 aatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-tatctaattgatttccatattt 206  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  32287142 aatattttctaattcccctcctccaaaccttaaccatgatttcctaatttccctcctcctaaaacttatgtaattgatttccatattt 32287229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 35433082 - 35433010
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  35433082 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgat 35433010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 204367 - 204448
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcc 178  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||||| ||| |||||||    
T  204367 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcc 204448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 1925586 - 1925514
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  1925586 ttgtagccacttttctctccttcaaaacctaaccatatttcctaattccccttctccaaaccctaaccatgat 1925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 980327 - 980244
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||||||||||    
T  980327 atatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccata 980244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 13900798 - 13900859
Alignment:
Q  330 attcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacgg 391  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  13900798 attcgtgacttttacggaatcgatcttggtgcctggattaccttggtttttgtgggtgacgg 13900859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 2296966 - 2297042
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  2296966 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 2297042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 25643727 - 25643803
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  25643727 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 25643803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 6120827 - 6120903
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||| ||||||| ||||||||||||| |||||||    
T  6120827 cctaatattt-tagcaacttttccctcctttaaaacctaaccatattttctaattctcctcctccaaaccttaaccat 6120903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 2297065 - 2297099
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  2297065 atatttcctaattcccctcctccaaaccctaacca 2297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 6120926 - 6120960
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  6120926 atatttcctaattcccctcctccaaaccctaacca 6120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 25643826 - 25643860
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  25643826 atatttcctaattcccctcctccaaaccctaacca 25643860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 26453251 - 26453327
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  26453251 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttc 26453327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 1271945 - 1271989
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  1271945 ttattcttaaacaaagcactgttgccctaattccacctaatattt 1271989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 13900059 - 13900121
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaatt---cccctcctccaaaccctaaccat 156  Q
    |||||| ||||| |||||||||| |||||||||||||   | |||||||||||||||||||||    
T  13900059 ttttccatcctttaaaacctaaccatatttcctaattctcctcctcctccaaaccctaaccat 13900121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 30915407 - 30915455
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||||    
T  30915407 tctcttattcttaaacaaagaactgttgccctaattccacctaatattt 30915455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 13900144 - 13900178
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  13900144 atattttctaattcccctcctccaaaccctaacca 13900178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 13899720 - 13899788
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  13899720 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 13899788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 40603087 - 40603163
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  40603087 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 40603163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 7e-53; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 32672849 - 32672990
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  32672849 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 32672948  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  32672949 catattttctgttgccatatttttttcctcacttcctcaact 32672990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 87 - 224
Target Start/End: Original strand, 20842299 - 20842437
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||    
T  20842299 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttcccttctcctaaaacct 20842398  T
Q  186 atctaattgatttccatatttctagttgccatatttttt 224  Q
    | |||||||||||||||||||    ||||||||||||||    
T  20842399 acctaattgatttccatattttcttttgccatatttttt 20842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 87 - 240
Target Start/End: Original strand, 20844450 - 20844604
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  20844450 ttgtagccatttttccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 20844549  T
Q  186 atctaattgatttccatatttctagttgccatattttttcctcacttcctcaact 240  Q
    | |||||||||||||||||||    |||| |||||||||  ||||||||||||||    
T  20844550 acctaattgatttccatattttcttttgcaatatttttttgtcacttcctcaact 20844604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 23179589 - 23179730
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  23179589 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 23179688  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  23179689 catattttctgttgccatatttttttcctcacttcctcaact 23179730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 322 - 449
Target Start/End: Original strand, 10038933 - 10039060
Alignment:
Q  322 gtaaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtt 421  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||  |||||||||||||||    
T  10038933 gtaaagcgattcttgacttttacggaatcgatcttggtgcctggattaccttggtttttgttgatgacggacagtttgatatatagttgactgataggtt 10039032  T
Q  422 tcgcaagagtatcccctacccggttttt 449  Q
    || |||||||||||||||||||||||||    
T  10039033 tcacaagagtatcccctacccggttttt 10039060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 23178625 - 23178787
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  23178625 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 23178723  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  23178724 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 23178787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 32671941 - 32672103
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| |||||||||||| |||||||||||| ||||||||||||| ||||||    
T  32671941 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccatcaaaacctaaccatatttcctaatttccctcc 32672039  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||| ||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  32672040 tccaaaccctaactatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 32672103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 20844704 - 20844817
Alignment:
Q  94 catttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaat 192  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||    
T  20844704 catttttccctcattcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaacctacctaat 20844803  T
Q  193 tgatttccatattt 206  Q
    ||||||||||||||    
T  20844804 tgatttccatattt 20844817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 23178365 - 23178529
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  23178365 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 23178463  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||||||||||    
T  23178464 cctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccata 23178529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 34757288 - 34757452
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  34757288 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 34757386  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||||||||||    
T  34757387 cctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccata 34757452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 20844941 - 20845061
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||| ||    
T  20844941 ttgtagccactttttcctccttcaaaacctaacaatatttcctaattcccttcctccaaaccctaactatgatttcctaatttacctcctcctaaaacct 20845040  T
Q  186 atctaattgatttccatattt 206  Q
    | |||||||||||||||||||    
T  20845041 acctaattgatttccatattt 20845061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 10037141 - 10037303
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  10037141 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 10037239  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||||||||||||||| || |||||| ||| |||||||||||| | ||||||||||||| ||||    
T  10037240 tccaaaccctaaccatcatttcctaacttcactcctcctaaaatcaatctaattgattttcata 10037303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 23179487 - 23179581
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23179487 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 23179581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 12651281 - 12651406
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  12651281 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 12651379  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  12651380 ctaaaacctatctaattgatttccata 12651406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 39874161 - 39874286
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  39874161 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 39874259  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  39874260 ctaaaacctatctaattgatttccata 39874286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 20842448 - 20842561
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  20842448 ttgtagccatttttccctcattcaaaacataaccatatttcataattcccctcctccaaaccctaaccatgattttctaatttccctcctcctaaaacct 20842547  T
Q  186 atctaattgatttc 199  Q
    | ||||||||||||    
T  20842548 acctaattgatttc 20842561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 23180083 - 23180190
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||    
T  23180083 ttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattga 23180182  T
Q  196 tttccata 203  Q
    ||||||||    
T  23180183 tttccata 23180190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 23184351 - 23184458
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||    
T  23184351 ttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattga 23184450  T
Q  196 tttccata 203  Q
    ||||||||    
T  23184451 tttccata 23184458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 23179296 - 23179390
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  23179296 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcccaaccctaaccatgatttcctaatttccctcttcctaaaac 23179390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 20845090 - 20845205
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| || |||||||||||||| ||||| ||    
T  20845090 ttgtggccacttttccctccttcaaaacctaactatatttcctaattctcctccttcaaaccctaaccatgatttcgtaatttccctcctcataaaacct 20845189  T
Q  186 atctaattgatttcca 201  Q
    | ||||||||||||||    
T  20845190 acctaattgatttcca 20845205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 32672754 - 32672841
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  32672754 ttttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaatttccctcctcctaaaac 32672841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 20108454 - 20108393
Alignment:
Q  330 attcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacgg 391  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  20108454 attcgtgacttttacggaatcgatcttggtgcctggattaccttggtttttgtgggtgacgg 20108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 30094433 - 30094369
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaacc 154  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  30094433 tagcaatttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 30094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 3611903 - 3611844
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  3611903 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 3611844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 20109189 - 20109130
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  20109189 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 20109957 - 20109898
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  20109957 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 3611173 - 3611110
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacgg 391  Q
    ||||| |||||||||||||| ||||||| ||||||||||||    |||||||||||||||||||||||    
T  3611173 aaagcaattcgtgacttttacggaatcgatcttggtgcctg----accttggtttttgtgggtgacgg 3611110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 30093697 - 30093634
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacgg 391  Q
    ||||| |||||||||||||| ||||||| ||||||||||||    |||||||||||||||||||||||    
T  30093697 aaagcaattcgtgacttttacggaatcgatcttggtgcctg----accttggtttttgtgggtgacgg 30093634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 3611821 - 3611787
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  3611821 atatttcctaattcccctcctccaaaccctaacca 3611787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 30094344 - 30094310
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  30094344 atatttcctaattcccctcctccaaaccctaacca 30094310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109107 - 20109073
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109107 atattttctaattcccctcctccaaaccctaacca 20109073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109742 - 20109708
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109742 atattttctaattcccctcctccaaaccctaacca 20109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109875 - 20109841
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109875 atattttctaattcccctcctccaaaccctaacca 20109841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 7e-53; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 101 - 240
Target Start/End: Complemental strand, 41862017 - 41861876
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  41862017 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 41861918  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  41861917 catattttctgttgccatatttttttcctcacttcctcaact 41861876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 324 - 449
Target Start/End: Original strand, 42345967 - 42346092
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  42345967 aaagcgattcgtgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 42346066  T
Q  424 gcaagagtatcccctacccggttttt 449  Q
     |||||||||||||||||||||||||    
T  42346067 acaagagtatcccctacccggttttt 42346092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 52680317 - 52680458
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  52680317 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 52680416  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  52680417 catattttctgttgccatatttttttcctcacttcctcaact 52680458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 14147840 - 14147706
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  14147840 aaagcgattcatgacttttacggaatcgatcttggtgcctggattaccttggtttttgtgggtgatggacagtttgatatacacttgactgataggtttc 14147741  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||||| || ||||||||||||||    
T  14147740 acaagagtatcccctacctgg-tttttgatccccct 14147706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 16905788 - 16905950
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  16905788 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 16905886  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||| ||||    
T  16905887 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgattttcata 16905950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 52679693 - 52679855
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||| ||||||||||||||||| ||||||||||||| ||||||    
T  52679693 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttctctccttcaaaacctaaccatatttcctaatttccctcc 52679791  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  52679792 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 52679855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 53285595 - 53285745
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  53285595 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tatcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 53285693  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaactatctaat 192  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  53285694 tccaaaccctaaccatgatttcctaatttcactcctcctaaacctatctaat 53285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 21380272 - 21380434
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||  | ||||||||||||||||||||||| ||||||||||||||||||||    
T  21380272 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagaaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 21380370  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||| ||||    
T  21380371 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgattttcata 21380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 35756412 - 35756537
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  35756412 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 35756510  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  35756511 ctaaaacctatctaattgatttccata 35756537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 42345227 - 42345352
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  42345227 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 42345325  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  42345326 ctaaaacctatctaattgatttccata 42345352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 41863289 - 41863127
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || || ||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  41863289 tcttattcctaaacaaagctttgttgccctaattttaacttaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 41863191  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  41863190 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 41863127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 53286495 - 53286629
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||| | |||||||||||| ||||    
T  53286495 aaagcgattcgtgaattttacggaatcgatcttggtgcctggattaccttagtttttgttggtgaaggacagtttgatatgcagttgactgatagctttc 53286594  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||||||||| | ||||||||||||||    
T  53286595 acaagagtatcccctacccag-tttttgatccccct 53286629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 29363615 - 29363490
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  29363615 acctaatattt-tagcaacttttccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 29363517  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  29363516 ctaaaacctatctaattgatttccata 29363490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 41862301 - 41862207
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41862301 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41862207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 44 - 192
Target Start/End: Original strand, 42345071 - 42345220
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctc 142  Q
    |||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42345071 ttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctc 42345169  T
Q  143 caaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaat 192  Q
    ||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  42345170 caaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaat 42345220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 22673246 - 22673408
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||  ||| ||||||||||||| ||||||||||||| ||||||    
T  22673246 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttatctctttcaaaacctaaccatatttcctaatttccctcc 22673344  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||||||| |||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  22673345 tccaaaccttaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 22673408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 240
Target Start/End: Complemental strand, 41946546 - 41946424
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccatatttctagttgccata- 218  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||   |||||||||     
T  41946546 atatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcctaaaatctatctaattgatttccatattttctgttgccatat 41946447  T
Q  219 -ttttttcctcacttcctcaact 240  Q
     ||||||||||||||||||||||    
T  41946446 tttttttcctcacttcctcaact 41946424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 22673789 - 22673883
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22673789 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccataatttcctaatttccctcctcctaaaac 22673883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 28380247 - 28380372
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  28380247 acctaatattt-tagcaacttttccccccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 28380345  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||| ||||    
T  28380346 ctaaaacctatctaattgattttcata 28380372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 29363943 - 29363829
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  29363943 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 29363845  T
Q  178 ctaaaa-ctatctaat 192  Q
    |||||| |||||||||    
T  29363844 ctaaaacctatctaat 29363829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 41862108 - 41862025
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41862108 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41862025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 41862199 - 41862116
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41862199 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41862116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 52680215 - 52680309
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  52680215 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaac 52680309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 53285752 - 53285877
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  53285752 acctaatattt-tagcaactttttcctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 53285850  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||| ||||||||||||||    
T  53285851 ctaaaacctatccaattgatttccata 53285877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 41946820 - 41946724
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatat--ttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41946820 tagccacttttccctccttcaaaacctaaccatatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41946724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 29363822 - 29363708
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  29363822 acctaatattt-tagcaacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 29363724  T
Q  178 ctaaaa-ctatctaat 192  Q
    |||||| |||||||||    
T  29363723 ctaaaacctatctaat 29363708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 30390898 - 30390791
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||| |||||| ||| |||||||||||| ||||||||||||    
T  30390898 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaactatgatttcctaacttcactcctcctaaaacctatctaattga 30390799  T
Q  196 tttccata 203  Q
    ||||||||    
T  30390798 tttccata 30390791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 41946716 - 41946633
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41946716 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 22673893 - 22673970
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22673893 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 22673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 41862492 - 41862398
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||| ||||| ||||||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41862492 tagccactttaccctctttcaaaacctaaccatattttctatttcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41862398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 41946625 - 41946546
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctccta 180  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  41946625 ccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctccta 41946546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 14148646 - 14148570
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  14148646 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 14148500 - 14148424
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  14148500 cctaatattt-tagcaacttttctctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 29362884 - 29362826
Alignment:
Q  400 atataccgttgactgataggtttcgcaagagtatcccctacccggttttttgatccccct 459  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  29362884 atatacagttgactgataggtttcacaagagtatcccctacccggtttttt-atccccct 29362826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 19518582 - 19518506
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  19518582 cctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 19518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 21585398 - 21585322
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  21585398 cctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 21585322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 25819673 - 25819749
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  25819673 cctaatattt-tagcaacttttccctcctttaaaacataaccatatttcctaattctcctcctccaaaccttaaccat 25819749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 22673646 - 22673726
Alignment:
Q  47 ttcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  22673646 ttcttaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttc 22673726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 14148547 - 14148513
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  14148547 atatttcctaattcccctcctccaaaccctaacca 14148513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 19518483 - 19518449
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  19518483 atatttcctaattcccctcctccaaaccctaacca 19518449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 21585299 - 21585265
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  21585299 atatttcctaattcccctcctccaaaccctaacca 21585265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 25819772 - 25819806
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  25819772 atatttcctaattcccctcctccaaaccctaacca 25819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 52680076 - 52680152
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| ||||||||||||||||||||||||| |||||||    
T  52680076 taaacaaagctttgttgccctaattttaaccttatattt-tagcaatttttccctccttcaaaacctaaccatatttc 52680152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 29363701 - 29363649
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaa 131  Q
    ||||||||||| |||| | ||||||||||||||||| ||||| |||||||||||    
T  29363701 acctaatattt-tagcaacttttccctccttcaaaatctaaccatatttcctaa 29363649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 7e-53; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 322 - 459
Target Start/End: Original strand, 11824682 - 11824818
Alignment:
Q  322 gtaaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtt 421  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  11824682 gtaaagcgattcttgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtt 11824781  T
Q  422 tcgcaagagtatcccctacccggttttttgatccccct 459  Q
    || |||||||||||||||||||| ||||||||||||||    
T  11824782 tcacaagagtatcccctacccgg-tttttgatccccct 11824818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 31484341 - 31484475
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  31484341 aaagcgattcgtgacttttacggaatcaatcttggtgcctggattaccttggtttttgtgggtgacggacaatttgatatacagttgactgataggtttc 31484440  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||||||||||| ||||||||||||||    
T  31484441 acaagagtatcccctacccgg-tttttgatccccct 31484475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 33005413 - 33005279
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  33005413 aaagcgattcttgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 33005314  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||||||||| |||||||||||||    
T  33005313 acaagagtatcccctacccggt-ttttgatccccct 33005279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 36090364 - 36090230
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  36090364 aaagcgattcgtgacttttatagaatcgatcttggtgcctgaattaccttggtttttgttggtgacggacagtttgatatacagttgactgataggtttc 36090265  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||||||||| |||||||||||||    
T  36090264 acaagagtatcccctacccggt-ttttgatccccct 36090230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 324 - 449
Target Start/End: Original strand, 857499 - 857624
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  857499 aaagcgattcgtgacttttacgaaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatatacggttgactgataggtttc 857598  T
Q  424 gcaagagtatcccctacccggttttt 449  Q
     ||||||||| |||||||| ||||||    
T  857599 acaagagtataccctacccagttttt 857624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 101 - 240
Target Start/End: Complemental strand, 36093951 - 36093810
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  36093951 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctatctaattgatttc 36093852  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  36093851 catattttctgttgccatatttttttcctcacttcctcaact 36093810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 43509060 - 43508935
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||||||||||    
T  43509060 aaagcgattcgtgaattttatggaatcgatcttggtgcctggattaccttggtttttgttagcgacggacagtttgatatacagttgactgataggtttc 43508961  T
Q  424 gcaagagtatcccctacccggttttt 449  Q
     |||||||||||||||||||||||||    
T  43508960 acaagagtatcccctacccggttttt 43508935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 6953383 - 6953263
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  6953383 ttgtaaccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 6953284  T
Q  186 atctaattgatttccatattt 206  Q
    |||||||||||||||||||||    
T  6953283 atctaattgatttccatattt 6953263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 36947956 - 36947836
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-t 185  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  36947956 ttgtagccacttttccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacat 36947857  T
Q  186 atctaattgatttccatattt 206  Q
    |||||||||||||||||||||    
T  36947856 atctaattgatttccatattt 36947836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 18199401 - 18199543
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||||||    
T  18199401 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcctaaaatctatctaattgatttc 18199500  T
Q  200 catatttctagttgccata--ttttttcctcacttcctcaact 240  Q
    |||||||   |||||||||  ||||||||||||||||||||||    
T  18199501 catattttctgttgccatattttttttcctcacttcctcaact 18199543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 35713093 - 35713255
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  35713093 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 35713191  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  35713192 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 35713255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 47724504 - 47724666
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  47724504 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 47724602  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  47724603 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 47724666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 26949097 - 26949238
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  26949097 ccctccttcaaaacctaaccatatttcctaactcccctcctccaaactctaaccatgatttcctaatttccctcttcctaaaacctatctaattgatttc 26949196  T
Q  200 catatttctagttgccata-ttttttcctcacttcctcaact 240  Q
    |||||||   ||||||||| ||||||||||||||||||||||    
T  26949197 catattttctgttgccatatttttttcctcacttcctcaact 26949238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 35713870 - 35714004
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||||||||||||| ||||||| |||||||| ||| |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  35713870 aaagcgattcgtgacttttacggaatcgatcttggtgtctgaattacctttgtttttgttggtgacggacagtttgatatacagttgactgataggtttc 35713969  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||| |||||| ||||||||||||||    
T  35713970 acaagagtatccccaacccgg-tttttgatccccct 35714004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 49565348 - 49565214
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    ||||||||||||||||||||   ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  49565348 aaagcgattcgtgacttttacacaatcgatcttggtgcctgaattaccttggtttttgttggtgacggacagtttgatatacagttgtctgataggtttc 49565249  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     ||||||||||||||||||||| |||||||||||||    
T  49565248 acaagagtatcccctacccggt-ttttgatccccct 49565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 49566130 - 49565968
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  49566130 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 49566032  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  49566031 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 49565968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 6953894 - 6953784
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  6953894 ttttccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaatctatctaattga 6953795  T
Q  196 tttccatattt 206  Q
    |||||||||||    
T  6953794 tttccatattt 6953784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 36948081 - 36947975
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-tatctaattgatttc 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  36948081 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacatatctaattgatttc 36947982  T
Q  200 catattt 206  Q
    |||||||    
T  36947981 catattt 36947975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 6953522 - 6953402
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  6953522 ttgtaaccacttttccctcccttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 6953423  T
Q  186 atctaattgatttccatattt 206  Q
    |||||||||||||||||||||    
T  6953422 atctaattgatttccatattt 6953402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 6953765 - 6953645
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||    
T  6953765 ttgtaaccacttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctgttaaaacct 6953666  T
Q  186 atctaattgatttccatattt 206  Q
    |||||||||||||||||||||    
T  6953665 atctaattgatttccatattt 6953645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 11823906 - 11824068
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||| |    
T  11823906 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattccccttc 11824004  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||| ||||| ||||||||||||||||||||    
T  11824005 tccaaaccctaaccatgatttcctaacttcactcctcataaaacctatctaattgatttccata 11824068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 36095049 - 36094887
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  36095049 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 36094951  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  36094950 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 36094887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 43509837 - 43509675
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  43509837 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatatttcctaatttccctcc 43509739  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||| ||||||||| |||||| ||| |||||||||||| ||||||||||||||| ||||    
T  43509738 tccaaaccccaaccatgatttcctaacttcactcctcctaaaacctatctaattgattttcata 43509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 36947817 - 36947704
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |    
T  36947817 ttgtagccacttttccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaatat 36947718  T
Q  186 atctaattgatttc 199  Q
    ||||||||||||||    
T  36947717 atctaattgatttc 36947704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 855069 - 855187
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||    
T  855069 ttgtagacacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaactatgatttcctaatttccctcctcctaaaacct 855168  T
Q  186 atctaattgatttccatat 204  Q
    | |||||||||||||||||    
T  855169 acctaattgatttccatat 855187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 18199299 - 18199393
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18199299 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 18199393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 36094053 - 36093959
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36094053 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 36093959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 851176 - 851366
Alignment:
Q  8 ttttccctctttcaaaacctaaccatatctcttctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctcc 106  Q
    ||||||||| |||||||||||||  |||||    |||||||||||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||    
T  851176 ttttccctccttcaaaacctaac--tatct----tcttattcttaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcc 851268  T
Q  107 ttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||| |||||  |||||||||||||||||||| |||||||| || | |||| ||| |||||||||||| ||||||||||||||||||||    
T  851269 ttcaaaacctaaccatattctctaattcccctcctccaaactctaaccataatttgctaacttcactcctcctaaaacctatctaattgatttccata 851366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 31483608 - 31483715
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  31483608 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattga 31483707  T
Q  196 tttccata 203  Q
    ||| ||||    
T  31483708 ttttcata 31483715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 33006191 - 33006030
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  33006191 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacc-tatttcctaattcccctcc 33006094  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||||||||||||||| || |||||| ||| ||||||| |||| ||||||||||||||||||||    
T  33006093 tccaaaccctaaccatcatttcctaacttcactcctccgaaaacctatctaattgatttccata 33006030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 35860667 - 35860505
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||| || |||    
T  35860667 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaatttccttcc 35860569  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||| ||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  35860568 tccaaacgctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 35860505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 36095264 - 36095102
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||| || |||    
T  36095264 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaatttccttcc 36095166  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||| ||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  36095165 tccaaacgctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 36095102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 1883441 - 1883316
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| |||||| ||| ||||||    
T  1883441 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaactatgatttcctaacttcactcctc 1883343  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  1883342 ctaaaacctatctaattgatttccata 1883316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 26943925 - 26944050
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  26943925 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 26944023  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  26944024 ctaaaacctatctaattgatttccata 26944050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 36094244 - 36094150
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  36094244 tagccacttttccctccttcaaaacctaacaatatttcctaattcccctcctcccaaccctaaccatgatttcctaatttccctcttcctaaaac 36094150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 26942979 - 26943139
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctc 142  Q
    |||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||    
T  26942979 ttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctc 26943077  T
Q  143 caaaccctaaccatgatctcctaatttccctcctcctaaa-actatctaattgatttccata 203  Q
    ||||||||||||||||| | |||| ||| |||||||||||  ||||||||||||||||||||    
T  26943078 caaaccctaaccatgattttctaacttcactcctcctaaagcctatctaattgatttccata 26943139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 18199223 - 18199127
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaat 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  18199223 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaat 18199127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 36091106 - 36090981
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||| |||||| ||| ||||||    
T  36091106 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctagttcctctcctccaaaccctaaccatgatttcctaacttcactcctc 36091008  T
Q  178 ctaaaac-tatctaattgatttccata 203  Q
    ||||||| |||||||||||||||||||    
T  36091007 ctaaaacatatctaattgatttccata 36090981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 36947678 - 36947569
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac-t 185  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| |  ||||||||||||||||||||| |    
T  36947678 ttgtagccacttttccctccttcaaaacctaaccatatttccaaattcccctcctccaaaccctaactatgattttttaatttccctcctcctaaaacat 36947579  T
Q  186 atctaattga 195  Q
    ||||||||||    
T  36947578 atctaattga 36947569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 6953628 - 6953541
Alignment:
Q  120 aatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccatattt 206  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  6953628 aatatttcctaattcccctcctccaaaccctaaccatgattttctaatttccctcctcctaaaacctatctaattgatttccatattt 6953541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 26943657 - 26943744
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  26943657 ttttccctccttcaaaacctaaccatatttactaattcccctcctccaaaccctaaccatgatttcttaatttccctcctcctaaaac 26943744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 18256866 - 18256760
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||| ||| |||||||||||| ||    
T  18256866 ttgtagtcacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaactatgattttctaacttcactcctcctaaaacct 18256767  T
Q  186 atctaat 192  Q
    |||||||    
T  18256766 atctaat 18256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 52419677 - 52419531
Alignment:
Q  35 tctcttctcttattcttaaacaaagcactgtcgccctaattatacctaatattt------------gtagccatttttccctccttcaaaacctaacaat 122  Q
    |||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||            ||||||| ||||||||||||||||||||||| ||    
T  52419677 tctcatctcttattcataaacaaagcactgttgccttaattatacctaatatttaacctaaaaatcgtagccacttttccctccttcaaaacctaaccat 52419578  T
Q  123 atttcctaattcccctcctccaaaccctaaccatgatctcctaattt 169  Q
    |||| ||||||||||| ||||||| |||||||||||| |||||||||    
T  52419577 attttctaattccccttctccaaatcctaaccatgatttcctaattt 52419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 854955 - 855058
Alignment:
Q  122 tatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccatatttctagttgccatatt 220  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||    ||||||||||    
T  854955 tattttctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacctacataattgatttccatattttcttttgccatatt 855054  T
Q  221 tttt 224  Q
    ||||    
T  855055 tttt 855058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 38662219 - 38662116
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| |||| ||||| | |||| ||| |||||||||||| ||||||||||||||||    
T  38662219 ccctcctccaaaacctaaccatatttcctaattcccctcctccaaaccataacaatgattttctaacttcactcctcctaaaacctatctaattgatttc 38662120  T
Q  200 cata 203  Q
    ||||    
T  38662119 cata 38662116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 38662314 - 38662177
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| |||||||||   ||| ||||||||| || |||||||||| |||| | ||||| ||||||||||||||||| ||||||||||||||||||    
T  38662314 tctcttattcctaaacaaagttttgttgccctaattttaacctaatattt-tagcaacttttctctccttcaaaacctaaccatatttcctaattcccct 38662216  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcc 178  Q
    |||||||| ||||||||| || |||||||| |||||||||    
T  38662215 cctccaaaacctaaccat-atttcctaattcccctcctcc 38662177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 18256753 - 18256681
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaacccta 151  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18256753 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaacccta 18256681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 17657165 - 17657241
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  17657165 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 17657241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 16647453 - 16647517
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaacc 154  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  16647453 tagcaatttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 16647517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 13458684 - 13458625
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  13458684 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 13458625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 26949027 - 26949089
Alignment:
Q  122 tatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  26949027 tatttcataattcccatcctccaaaccctaaccatgattttctaatttccctcctcctaaaac 26949089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 4585523 - 4585599
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  4585523 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 4585599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 12257890 - 12257949
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  12257890 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 12257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 13457954 - 13457891
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacgg 391  Q
    ||||| |||||||||||||| ||||||| ||||||||||||    |||||||||||||||||||||||    
T  13457954 aaagcaattcgtgacttttacggaatcgatcttggtgcctg----accttggtttttgtgggtgacgg 13457891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 16648189 - 16648252
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacgg 391  Q
    ||||| |||||||||||||| ||||||| ||||||||||||    |||||||||||||||||||||||    
T  16648189 aaagcaattcgtgacttttacggaatcgatcttggtgcctg----accttggtttttgtgggtgacgg 16648252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 4585622 - 4585656
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  4585622 atatttcctaattcccctcctccaaaccctaacca 4585656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 12257972 - 12258006
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  12257972 atatttcctaattcccctcctccaaaccctaacca 12258006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 13458602 - 13458568
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  13458602 atatttcctaattcccctcctccaaaccctaacca 13458568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 16647542 - 16647576
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  16647542 atatttcctaattcccctcctccaaaccctaacca 16647576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 35860452 - 35860375
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| ||||||||||||    
T  35860452 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaac 35860375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 36094377 - 36094309
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  36094377 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 36094309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 851166 - 851198
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||| |||||||||||||||||||||||    
T  851166 ttgtagccacttttccctccttcaaaacctaac 851198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 4e-51; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 90 - 240
Target Start/End: Original strand, 3589246 - 3589399
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatc 188  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  3589246 tagccatttttccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaatctatc 3589345  T
Q  189 taattgatttccatatttctagttgccata--ttttttcctcacttcctcaact 240  Q
    |||||||||| |||||||   |||||||||  ||||||||||||||||||||||    
T  3589346 taattgattttcatattttctgttgccatattttttttcctcacttcctcaact 3589399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 324 - 449
Target Start/End: Original strand, 24457231 - 24457356
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  24457231 aaagcgattcttgacttttacggaatcgatcttggtgcctggattacctttgtttttgttggtgacggatagtttgatatacagttgactgataggtttc 24457330  T
Q  424 gcaagagtatcccctacccggttttt 449  Q
     |||||||||||||||||||||||||    
T  24457331 acaagagtatcccctacccggttttt 24457356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 328 - 459
Target Start/End: Complemental strand, 29371036 - 29370906
Alignment:
Q  328 cgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttcgcaa 427  Q
    |||||| ||||||||| ||||| | |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||    
T  29371036 cgattcatgacttttacggaattgatcttggtgcctggattaccttggtttttgttggtgacagacagtttgatatacagttgactgataggtttcacaa 29370937  T
Q  428 gagtatcccctacccggttttttgatccccct 459  Q
    |||||||||||||||||| |||||||||||||    
T  29370936 gagtatcccctacccggt-ttttgatccccct 29370906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 29374373 - 29374211
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  29374373 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 29374275  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||  | |||||| ||| |||||||||||| ||||||||||||||||||||    
T  29374274 tccaaaccctaaccatcgtttcctaacttcactcctcctaaaacctatctaattgatttccata 29374211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 29371821 - 29371659
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | | ||||||||||||||||| ||||| ||||||||||||||||||||    
T  29371821 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-taacaacttttccctccttcaaaatctaaccatatttcctaattcccctcc 29371723  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  29371722 tccaaaccctaaccatgatttcctaacttcactcctcctaaaacctatctaattgatttccata 29371659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 33049857 - 33049693
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  33049857 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 33049759  T
Q  139 cctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||||||||||    
T  33049758 cctcgaaaccctaaccatgatttcctaacttcactccccctaaaacctatctaattgatttccata 33049693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 29373595 - 29373461
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||| |||||||||||||||||    
T  29373595 aaagtgattcttgacttttacggaatcgatcttggtgcctggattaccttggtttttgttggtgacagacattttgatatacagttgactgataggtttc 29373496  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
     |||||||||||| ||||| | ||||||||||||||    
T  29373495 acaagagtatcccatacccag-tttttgatccccct 29373461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 2271841 - 2271959
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  2271841 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctc 2271939  T
Q  178 ctaaaa-ctatctaattgat 196  Q
    |||||| |||||||||||||    
T  2271940 ctaaaacctatctaattgat 2271959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 24456418 - 24456543
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||| ||| ||||||    
T  24456418 acctaatattt-tagcaaattttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaacttcactcctc 24456516  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  24456517 ctaaaacctatctaattgatttccata 24456543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 33007419 - 33007258
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| |||||||||   ||| ||||||||| || || ||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  33007419 tcttattcctaaacaaagttttgttgccctaattttaacttaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 33007321  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    | ||||||||| ||||||| |||||| ||  |||||||||||| ||||||||||||||| ||||    
T  33007320 t-caaaccctagccatgatttcctaacttaactcctcctaaaacctatctaattgattttcata 33007258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 33006606 - 33006539
Alignment:
Q  391 gacagtttgatataccgttgactgataggtttcgcaagagtatcccctacccggttttttgatccccct 459  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||| | ||||||||||||||    
T  33006606 gacagtttgatatacagttgactgataggtttcacaagagtatcccttaccc-gatttttgatccccct 33006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 29921016 - 29921092
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||| |||||||  ||||||||| |||||||||||||| |||||||||||||||||||||    
T  29921016 cctaatattt-tagcaactttttcctcctttgaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 29921092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 98; Significance: 4e-48; HSPs: 5)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 41380 - 41521
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttc 199  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  41380 ccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcctaaaacctatctaattgatttc 41479  T
Q  200 catatttctagttgccat-attttttcctcacttcctcaact 240  Q
    |||||||   |||||||| |||||||||||||||||||||||    
T  41480 catattttctgttgccataattttttcctcacttcctcaact 41521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 40777 - 40939
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  40777 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcc 40875  T
Q  141 tccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattgatttccata 203  Q
    ||||||||||||||||||| |||||| | | |||||||||||| ||||||||||||||||||||    
T  40876 tccaaaccctaaccatgatttcctaactccactcctcctaaaacctatctaattgatttccata 40939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 41187 - 41281
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41187 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 41289 - 41372
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 184  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41289 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 41372  T

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Target: scaffold0121; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 41047 - 41115
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  41047 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 41115  T

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Target: scaffold0160 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 324 - 463
Target Start/End: Original strand, 37161 - 37299
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    |||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||||  || |||||||||||| |||||||||||||||||    
T  37161 aaagcgattcctgacttttactcaatcggtcttggtgcctagattaccttggtttttgtgggtgatagatagtttgatatacggttgactgataggtttc 37260  T
Q  424 gcaagagtatcccctacccggttttttgatccccctttgc 463  Q
     |||||||||||||||||||| ||||||||||||||||||    
T  37261 acaagagtatcccctacccgg-tttttgatccccctttgc 37299  T

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Target: scaffold0160; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 87 - 224
Target Start/End: Original strand, 36076 - 36214
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  36076 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccatcctccaaaccctaaccatgatttcctaatttccctcctcctaaaacct 36175  T
Q  186 atctaattgatttccatatttctagttgccatatttttt 224  Q
    |  |||||||||||||| |||    ||||||||||||||    
T  36176 acttaattgatttccatcttttcttttgccatatttttt 36214  T

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Target: scaffold0160; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 87 - 224
Target Start/End: Original strand, 36225 - 36362
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ct 185  Q
    ||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||    
T  36225 ttgtacccacttttccctcctttaaaacctaaccatatttcctaattcccctcctccaaa-cctaaccatgatttcctaatttccctcctcctaaaacct 36323  T
Q  186 atctaattgatttccatatttctagttgccatatttttt 224  Q
    | ||||||||||| |||||||    ||||||||||||||    
T  36324 acctaattgattttcatattttcttttgccatatttttt 36362  T

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Target: scaffold0160; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 36373 - 36445
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  36373 ttgtagccacttttccctccttcaaaacctaaccatatatcctaattcccctcctccaaaccctaaccatgat 36445  T

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Target: scaffold0374 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 891 - 1025
Alignment:
Q  324 aaagcgattcgtgacttttatggaatcggtcttggtgcctggattaccttggtttttgtgggtgacggacagtttgatataccgttgactgataggtttc 423  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||||||   |||||||||||||||    
T  891 aaagcgattcgtgacttttacagaatcggtcttggtgcctggattaccttggtttttgatggtgagggacaatttgatatacgactgactgataggtttc 990  T
Q  424 gcaagagtatcccctacccggttttttgatccccct 459  Q
      ||||||||||||||||| | ||||||||||||||    
T  991 ataagagtatcccctacccag-tttttgatccccct 1025  T

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Target: scaffold0374; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 183 - 107
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||    
T  183 cctaatattt-tagcaacttttccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 84 - 50
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  84 atatttcctaattcccctcctccaaaccctaacca 50  T

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Target: scaffold0097 (Bit Score: 79; Significance: 9e-37; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 44731 - 44606
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctc 177  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |    
T  44731 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactcccc 44633  T
Q  178 ctaaaa-ctatctaattgatttccata 203  Q
    |||||| ||||||||||||||||||||    
T  44632 ctaaaacctatctaattgatttccata 44606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 48739 - 48828
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaa 131  Q
    |||||||| |||||||||   ||| ||||||||| || |||||||||| |||| |||||||||| |||||||||||||| |||||||||||    
T  48739 tcttattcctaaacaaagttttgttgccctaattttaacctaatattt-tagcaatttttcccttcttcaaaacctaaccatatttcctaa 48828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 51585 - 51517
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  51585 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 51517  T

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Target: scaffold1113 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 2557 - 2450
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaa-ctatctaattga 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| || ||||||||| ||||||||||||    
T  2557 ttttccctccttcaaaacctaaccatatttcctaattcccctcctctaaaccctaaccatgatttcctaacttcacttctcctaaaacctatctaattga 2458  T
Q  196 tttccata 203  Q
    ||||||||    
T  2457 tttccata 2450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 293 - 369
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  293 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 392 - 426
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  392 atatttcctaattcccctcctccaaaccctaacca 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 10204 - 10280
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  10204 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 10280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 10303 - 10337
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  10303 atatttcctaattcccctcctccaaaccctaacca 10337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 28776 - 28700
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  28776 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 28700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 28677 - 28643
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  28677 atatttcctaattcccctcctccaaaccctaacca 28643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 29292 - 29248
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  29292 ttattcttaaacaaagcactgttgccctaattccacctaatattt 29248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 35545 - 35501
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  35545 ttattcttaaacaaagcactgttgccctaattccacctaatattt 35501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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