View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12093_low_10 (Length: 379)

Name: NF12093_low_10
Description: NF12093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12093_low_10
NF12093_low_10
[»] chr2 (27 HSPs)
chr2 (20-336)||(5985832-5986150)
chr2 (20-336)||(25045775-25046091)
chr2 (19-325)||(14693980-14694287)
chr2 (19-298)||(18390331-18390614)
chr2 (54-292)||(25141890-25142132)
chr2 (52-325)||(24792848-24793123)
chr2 (52-315)||(24834123-24834387)
chr2 (154-290)||(27852457-27852593)
chr2 (73-290)||(3539542-3539763)
chr2 (26-218)||(34137527-34137720)
chr2 (199-275)||(22259873-22259950)
chr2 (176-290)||(44072369-44072484)
chr2 (136-221)||(23375692-23375777)
chr2 (155-221)||(12627306-12627372)
chr2 (169-221)||(24505374-24505426)
chr2 (169-221)||(31504271-31504323)
chr2 (169-221)||(31506837-31506889)
chr2 (136-221)||(18546336-18546421)
chr2 (169-221)||(31756591-31756643)
chr2 (169-221)||(41684156-41684208)
chr2 (136-172)||(43946761-43946797)
chr2 (169-221)||(44621601-44621653)
chr2 (58-116)||(26393018-26393076)
chr2 (169-221)||(21238502-21238554)
chr2 (169-221)||(21241052-21241104)
chr2 (136-172)||(25174631-25174667)
chr2 (136-180)||(44369736-44369780)
[»] scaffold0010 (2 HSPs)
scaffold0010 (22-336)||(126382-126698)
scaffold0010 (54-173)||(1249-1368)
[»] chr8 (40 HSPs)
chr8 (19-325)||(22254430-22254735)
chr8 (19-335)||(17218356-17218674)
chr8 (25-336)||(19699820-19700134)
chr8 (20-318)||(23419097-23419394)
chr8 (136-325)||(23948034-23948224)
chr8 (22-325)||(17906939-17907247)
chr8 (19-325)||(36727129-36727438)
chr8 (19-309)||(23900095-23900388)
chr8 (136-336)||(18761221-18761422)
chr8 (19-290)||(31722619-31722893)
chr8 (52-213)||(37516296-37516457)
chr8 (25-270)||(20022178-20022427)
chr8 (19-95)||(23947967-23948043)
chr8 (52-276)||(13660993-13661218)
chr8 (136-276)||(13719636-13719777)
chr8 (86-275)||(19928897-19929087)
chr8 (54-221)||(17085497-17085664)
chr8 (136-221)||(15003293-15003378)
chr8 (54-221)||(20501423-20501590)
chr8 (199-270)||(45469365-45469437)
chr8 (136-221)||(10828848-10828934)
chr8 (69-173)||(28398195-28398299)
chr8 (136-221)||(43112802-43112887)
chr8 (169-221)||(9405088-9405140)
chr8 (136-221)||(22252508-22252593)
chr8 (136-221)||(21414622-21414707)
chr8 (136-221)||(22144780-22144865)
chr8 (55-116)||(22984257-22984318)
chr8 (169-221)||(6607652-6607704)
chr8 (169-221)||(7300458-7300510)
chr8 (54-116)||(16407077-16407140)
chr8 (136-218)||(21984597-21984679)
chr8 (55-113)||(22996479-22996537)
chr8 (54-116)||(23844427-23844489)
chr8 (136-210)||(24707213-24707287)
chr8 (136-173)||(17266384-17266421)
chr8 (136-172)||(21685459-21685495)
chr8 (136-172)||(21689808-21689844)
chr8 (169-221)||(22058784-22058836)
chr8 (199-270)||(22318056-22318128)
[»] chr5 (28 HSPs)
chr5 (25-336)||(25249907-25250219)
chr5 (25-336)||(25313691-25314004)
chr5 (20-318)||(10953745-10954044)
chr5 (20-300)||(21618043-21618325)
chr5 (224-325)||(20469267-20469368)
chr5 (195-325)||(30616445-30616576)
chr5 (54-173)||(23476094-23476213)
chr5 (136-221)||(25575005-25575090)
chr5 (136-221)||(25576198-25576283)
chr5 (169-221)||(29324616-29324668)
chr5 (169-221)||(43121836-43121888)
chr5 (169-221)||(43125369-43125421)
chr5 (54-116)||(25573896-25573958)
chr5 (54-108)||(25576290-25576344)
chr5 (136-221)||(4398348-4398433)
chr5 (136-221)||(26360501-26360586)
chr5 (136-221)||(23470465-23470550)
chr5 (54-108)||(25575097-25575151)
chr5 (148-221)||(25573770-25573843)
chr5 (136-180)||(15193369-15193413)
chr5 (169-221)||(16255330-16255382)
chr5 (169-221)||(16258963-16259015)
chr5 (169-221)||(22589127-22589179)
chr5 (169-221)||(22592682-22592734)
chr5 (169-221)||(22596237-22596289)
chr5 (169-221)||(22880859-22880911)
chr5 (169-221)||(23694131-23694183)
chr5 (169-221)||(26496558-26496610)
[»] chr4 (34 HSPs)
chr4 (19-336)||(21062295-21062614)
chr4 (20-318)||(32466293-32466592)
chr4 (20-318)||(15612747-15613044)
chr4 (75-318)||(51993272-51993515)
chr4 (25-336)||(20873-21169)
chr4 (52-275)||(50160774-50160998)
chr4 (26-218)||(19739401-19739593)
chr4 (54-221)||(14852217-14852384)
chr4 (74-276)||(27996502-27996705)
chr4 (148-336)||(35811454-35811643)
chr4 (55-212)||(13591272-13591430)
chr4 (54-173)||(15792386-15792505)
chr4 (136-218)||(14651397-14651479)
chr4 (136-221)||(8711305-8711390)
chr4 (136-222)||(33661783-33661869)
chr4 (136-221)||(21189155-21189240)
chr4 (136-180)||(15365377-15365421)
chr4 (136-221)||(10314334-10314419)
chr4 (136-221)||(41792312-41792397)
chr4 (169-221)||(4171696-4171748)
chr4 (169-221)||(14699388-14699440)
chr4 (169-221)||(31116447-31116499)
chr4 (136-213)||(38980153-38980230)
chr4 (169-221)||(287764-287816)
chr4 (169-221)||(15279480-15279532)
chr4 (136-211)||(16043730-16043806)
chr4 (25-108)||(40907637-40907721)
chr4 (169-221)||(47126219-47126271)
chr4 (169-221)||(55502142-55502194)
chr4 (136-221)||(1101956-1102041)
chr4 (136-221)||(13878555-13878640)
chr4 (136-172)||(18165662-18165698)
chr4 (169-221)||(28383498-28383550)
chr4 (136-211)||(40907728-40907803)
[»] chr3 (37 HSPs)
chr3 (19-315)||(11885658-11885955)
chr3 (134-318)||(12509448-12509633)
chr3 (104-309)||(13185631-13185839)
chr3 (136-318)||(14250179-14250362)
chr3 (191-336)||(16050754-16050901)
chr3 (25-325)||(15446958-15447258)
chr3 (25-154)||(16050617-16050750)
chr3 (19-249)||(11563387-11563621)
chr3 (136-221)||(15009552-15009637)
chr3 (54-270)||(9578236-9578454)
chr3 (87-213)||(14604587-14604713)
chr3 (136-221)||(603035-603120)
chr3 (52-116)||(12512025-12512090)
chr3 (136-221)||(37428388-37428473)
chr3 (136-221)||(30205803-30205888)
chr3 (136-218)||(11201995-11202077)
chr3 (136-221)||(32402376-32402461)
chr3 (55-116)||(15265775-15265836)
chr3 (54-118)||(839778-839842)
chr3 (169-221)||(2034377-2034429)
chr3 (169-221)||(2037884-2037936)
chr3 (169-221)||(2041625-2041677)
chr3 (169-221)||(7633038-7633090)
chr3 (136-172)||(11889215-11889251)
chr3 (169-221)||(14038851-14038903)
chr3 (169-221)||(14042319-14042371)
chr3 (169-221)||(54974058-54974110)
chr3 (169-221)||(54976668-54976720)
chr3 (169-221)||(54979278-54979330)
chr3 (54-116)||(16747351-16747413)
chr3 (54-116)||(16758083-16758145)
chr3 (54-116)||(30066528-30066590)
chr3 (136-221)||(39231365-39231450)
chr3 (136-180)||(12037390-12037434)
chr3 (136-172)||(12153623-12153659)
chr3 (54-118)||(28350629-28350693)
chr3 (86-118)||(41201306-41201338)
[»] chr1 (24 HSPs)
chr1 (25-325)||(45755181-45755481)
chr1 (20-336)||(42697438-42697757)
chr1 (104-325)||(24727122-24727344)
chr1 (49-325)||(12327833-12328110)
chr1 (136-274)||(51336271-51336410)
chr1 (136-221)||(24088056-24088141)
chr1 (202-275)||(13302742-13302816)
chr1 (136-213)||(22124972-22125049)
chr1 (202-275)||(7320734-7320808)
chr1 (139-221)||(45495550-45495632)
chr1 (54-108)||(47191214-47191268)
chr1 (136-221)||(52940220-52940305)
chr1 (136-221)||(45307931-45308016)
chr1 (137-213)||(28203956-28204032)
chr1 (136-221)||(37359109-37359194)
chr1 (169-221)||(14431748-14431800)
chr1 (169-221)||(20631990-20632042)
chr1 (169-221)||(36182249-36182301)
chr1 (52-221)||(20958718-20958887)
chr1 (54-180)||(24782548-24782675)
chr1 (136-173)||(16093261-16093298)
chr1 (136-221)||(47191275-47191360)
chr1 (169-221)||(20580138-20580190)
chr1 (169-221)||(22899648-22899700)
[»] scaffold0589 (1 HSPs)
scaffold0589 (54-336)||(4074-4358)
[»] scaffold0042 (1 HSPs)
scaffold0042 (19-325)||(29044-29349)
[»] chr7 (36 HSPs)
chr7 (20-318)||(10658949-10659248)
chr7 (104-336)||(15288843-15289078)
chr7 (52-325)||(36704662-36704937)
chr7 (54-325)||(4071506-4071781)
chr7 (25-309)||(14219003-14219291)
chr7 (104-290)||(48807451-48807640)
chr7 (136-276)||(15202951-15203092)
chr7 (104-290)||(16078070-16078258)
chr7 (202-336)||(18074714-18074849)
chr7 (104-290)||(13132446-13132635)
chr7 (55-212)||(9725005-9725163)
chr7 (199-309)||(35771549-35771660)
chr7 (54-221)||(42462562-42462730)
chr7 (134-221)||(16996864-16996951)
chr7 (136-221)||(4994127-4994212)
chr7 (202-290)||(15095762-15095851)
chr7 (137-221)||(13849100-13849184)
chr7 (169-221)||(21742682-21742734)
chr7 (75-218)||(17059767-17059910)
chr7 (136-221)||(9032708-9032793)
chr7 (136-221)||(16574018-16574103)
chr7 (136-221)||(16591559-16591644)
chr7 (136-221)||(16929450-16929535)
chr7 (136-221)||(21064607-21064692)
chr7 (136-221)||(35366865-35366950)
chr7 (169-221)||(123586-123638)
chr7 (169-221)||(8777021-8777073)
chr7 (169-221)||(13394858-13394910)
chr7 (169-221)||(16007091-16007143)
chr7 (169-221)||(48785987-48786039)
chr7 (176-290)||(15140025-15140140)
chr7 (229-275)||(8135377-8135423)
chr7 (54-116)||(11768387-11768449)
chr7 (136-221)||(13893219-13893304)
chr7 (229-275)||(15623884-15623930)
chr7 (54-118)||(7536717-7536781)
[»] scaffold0671 (1 HSPs)
scaffold0671 (23-336)||(4599-4913)
[»] scaffold0077 (2 HSPs)
scaffold0077 (54-318)||(5638-5904)
scaffold0077 (55-221)||(55005-55171)
[»] chr6 (26 HSPs)
chr6 (20-318)||(24550265-24550563)
chr6 (25-325)||(31731995-31732297)
chr6 (52-218)||(22375997-22376163)
chr6 (86-270)||(23501391-23501578)
chr6 (33-221)||(25738990-25739179)
chr6 (52-221)||(9621736-9621906)
chr6 (136-221)||(23620417-23620502)
chr6 (54-116)||(20137282-20137345)
chr6 (54-116)||(22195524-22195587)
chr6 (136-221)||(15539919-15540004)
chr6 (137-221)||(18453902-18453986)
chr6 (136-213)||(20137348-20137425)
chr6 (224-269)||(20177856-20177901)
chr6 (224-269)||(22158090-22158135)
chr6 (136-213)||(22195444-22195521)
chr6 (169-221)||(8523604-8523656)
chr6 (169-221)||(16103017-16103069)
chr6 (52-116)||(16245961-16246025)
chr6 (136-172)||(20224658-20224694)
chr6 (136-172)||(22118642-22118678)
chr6 (134-221)||(16830435-16830522)
chr6 (136-218)||(23527497-23527579)
chr6 (26-68)||(23077336-23077378)
chr6 (177-221)||(15685496-15685540)
chr6 (136-180)||(22059180-22059224)
chr6 (169-221)||(29493427-29493479)
[»] scaffold0220 (2 HSPs)
scaffold0220 (75-325)||(19660-19916)
scaffold0220 (27-80)||(18142-18195)
[»] scaffold0065 (2 HSPs)
scaffold0065 (25-336)||(52623-52936)
scaffold0065 (136-211)||(55713-55788)
[»] scaffold0003 (1 HSPs)
scaffold0003 (136-336)||(96170-96372)
[»] scaffold0002 (1 HSPs)
scaffold0002 (104-336)||(398301-398535)
[»] scaffold0075 (1 HSPs)
scaffold0075 (25-336)||(60572-60868)
[»] scaffold0151 (1 HSPs)
scaffold0151 (55-221)||(30799-30966)
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-290)||(107948-108218)
[»] scaffold0071 (1 HSPs)
scaffold0071 (25-325)||(14934-15234)
[»] scaffold0716 (1 HSPs)
scaffold0716 (98-270)||(1797-1970)
[»] scaffold0338 (1 HSPs)
scaffold0338 (136-279)||(10897-11041)
[»] scaffold0529 (1 HSPs)
scaffold0529 (52-276)||(3855-4080)
[»] scaffold0001 (4 HSPs)
scaffold0001 (26-218)||(498720-498913)
scaffold0001 (25-221)||(162417-162614)
scaffold0001 (136-172)||(447187-447223)
scaffold0001 (137-172)||(498098-498133)
[»] scaffold0004 (3 HSPs)
scaffold0004 (140-300)||(109947-110110)
scaffold0004 (134-221)||(204542-204629)
scaffold0004 (59-116)||(332933-332990)
[»] scaffold0780 (1 HSPs)
scaffold0780 (32-176)||(2711-2856)
[»] scaffold0628 (1 HSPs)
scaffold0628 (86-290)||(1184-1391)
[»] scaffold0054 (1 HSPs)
scaffold0054 (136-276)||(75162-75303)
[»] scaffold0017 (1 HSPs)
scaffold0017 (224-336)||(588-701)
[»] scaffold0331 (1 HSPs)
scaffold0331 (136-213)||(12318-12395)
[»] scaffold0056 (2 HSPs)
scaffold0056 (202-275)||(66958-67032)
scaffold0056 (19-144)||(66772-66898)
[»] scaffold0005 (1 HSPs)
scaffold0005 (136-218)||(165813-165895)
[»] scaffold0169 (1 HSPs)
scaffold0169 (55-221)||(28888-29054)
[»] scaffold0008 (1 HSPs)
scaffold0008 (176-290)||(135629-135744)
[»] scaffold0359 (1 HSPs)
scaffold0359 (136-218)||(16106-16188)
[»] scaffold0282 (1 HSPs)
scaffold0282 (136-221)||(17528-17613)
[»] scaffold0074 (1 HSPs)
scaffold0074 (33-218)||(8775-8961)
[»] scaffold0040 (2 HSPs)
scaffold0040 (86-212)||(13985-14111)
scaffold0040 (136-276)||(22891-23032)
[»] scaffold0379 (2 HSPs)
scaffold0379 (136-213)||(4097-4174)
scaffold0379 (136-213)||(14091-14168)
[»] scaffold0347 (1 HSPs)
scaffold0347 (136-221)||(9574-9659)
[»] scaffold0073 (1 HSPs)
scaffold0073 (137-218)||(57564-57645)
[»] scaffold1551 (1 HSPs)
scaffold1551 (136-180)||(149-193)
[»] scaffold0175 (1 HSPs)
scaffold0175 (176-290)||(8453-8568)
[»] scaffold0708 (1 HSPs)
scaffold0708 (54-116)||(1879-1941)
[»] scaffold0609 (1 HSPs)
scaffold0609 (136-221)||(5247-5332)
[»] scaffold0676 (1 HSPs)
scaffold0676 (54-180)||(4982-5109)
[»] scaffold0877 (1 HSPs)
scaffold0877 (136-219)||(1369-1452)
[»] scaffold0859 (1 HSPs)
scaffold0859 (229-276)||(4548-4595)
[»] scaffold0500 (2 HSPs)
scaffold0500 (52-186)||(8155-8290)
scaffold0500 (134-221)||(10902-10989)
[»] scaffold0108 (1 HSPs)
scaffold0108 (54-172)||(3768-3887)
[»] scaffold0034 (1 HSPs)
scaffold0034 (136-221)||(34122-34206)
[»] scaffold0011 (1 HSPs)
scaffold0011 (55-116)||(37580-37641)
[»] scaffold1984 (1 HSPs)
scaffold1984 (76-116)||(710-750)
[»] scaffold1853 (1 HSPs)
scaffold1853 (136-180)||(222-266)
[»] scaffold0525 (2 HSPs)
scaffold0525 (169-221)||(9844-9896)
scaffold0525 (169-221)||(7800-7852)
[»] scaffold0334 (1 HSPs)
scaffold0334 (104-180)||(9179-9255)
[»] scaffold0259 (1 HSPs)
scaffold0259 (54-118)||(10709-10773)
[»] scaffold0228 (1 HSPs)
scaffold0228 (136-180)||(18130-18174)
[»] scaffold0141 (1 HSPs)
scaffold0141 (169-221)||(33820-33872)
[»] scaffold0131 (1 HSPs)
scaffold0131 (169-221)||(2390-2442)
[»] scaffold0049 (1 HSPs)
scaffold0049 (169-221)||(80940-80992)
[»] scaffold0021 (1 HSPs)
scaffold0021 (169-221)||(133365-133417)
[»] scaffold0012 (1 HSPs)
scaffold0012 (136-172)||(220574-220610)
[»] scaffold0046 (1 HSPs)
scaffold0046 (54-116)||(16384-16447)
[»] scaffold0586 (1 HSPs)
scaffold0586 (136-205)||(2494-2563)
[»] scaffold0420 (1 HSPs)
scaffold0420 (136-173)||(5701-5738)
[»] scaffold0395 (1 HSPs)
scaffold0395 (136-213)||(7945-8022)
[»] scaffold0139 (1 HSPs)
scaffold0139 (136-173)||(39011-39048)
[»] scaffold0138 (1 HSPs)
scaffold0138 (136-173)||(17606-17643)
[»] scaffold1032 (1 HSPs)
scaffold1032 (136-172)||(3012-3048)
[»] scaffold0923 (1 HSPs)
scaffold0923 (136-172)||(588-624)
[»] scaffold0914 (1 HSPs)
scaffold0914 (55-115)||(2339-2399)
[»] scaffold0761 (1 HSPs)
scaffold0761 (77-117)||(5808-5848)
[»] scaffold0305 (1 HSPs)
scaffold0305 (76-108)||(20983-21015)
[»] scaffold0261 (1 HSPs)
scaffold0261 (136-172)||(8655-8691)
[»] scaffold0078 (1 HSPs)
scaffold0078 (136-172)||(16815-16851)
[»] scaffold0036 (1 HSPs)
scaffold0036 (136-180)||(65864-65907)


Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 20 - 336
Target Start/End: Original strand, 5985832 - 5986150
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatc 119  Q
    ||||||||||| ||| |||| ||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||    
T  5985832 gattcactcgctatgacgagcgacatctgggctcactcgcgaggggaggggaattgctcgcaaggcgagcgatgaagttcatcactcgcgaggcgagatc 5985931  T
Q  120 agctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattct 219  Q
    ||||||||| ||| |  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| |||||    
T  5985932 agctactcgctatggcaagcgatgaatgtcagctcgggcagaatgcagattttctcaaaaactcacccaaactcatggttctaaccttaaaactgattct 5986031  T
Q  220 aa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaa 318  Q
    || | | |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5986032 aatcatggttctatgaataatctaaggtctggacactatttctacatcaattcaacaggttcctactcttaattaatcaattctccaacttttaacctaa 5986131  T
Q  319 ctctc-aatcctcaaaact 336  Q
     |||| |||||||||||||    
T  5986132 ttctcaaatcctcaaaact 5986150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 336
Target Start/End: Original strand, 25045775 - 25046091
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatc 119  Q
    |||||||||||||||||||| ||||   ||| ||||||||||||||| |||  ||| |||| ||| ||||||||||||||||| ||||| ||||| |  |    
T  25045775 gattcactcgcaatggcgagcgacaaa-aggttcactcgcgaggcgaagggttttattcgctaggcgagcgatgaagttcatctctcgcgaggcggggac 25045873  T
Q  120 agctactcgttatagtgagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||||||| ||| |  ||||||||||||||||||||||||||| ||| |||||||| |||||||| |||| || |||||||||||||||||||| ||||    
T  25045874 agctactcgctatggcaagcgatgaatgtcagctcgggcagaattgcatattttctc-aaaactcaaccaattcaatggttctaaccttaaaactgattc 25045972  T
Q  219 taacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||| ||| ||||||| ||||||||||||    
T  25045973 taatcattgttctatgaatagtctaaggtctggacactaattctacaccaatttaacaggtttctactcttaattgatcgattctcc-acttttaaccta 25046071  T
Q  318 actc-tcaatcctcaaaact 336  Q
    | || | |||||||||||||    
T  25046072 attcttaaatcctcaaaact 25046091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 14693980 - 14694287
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag-a 117  Q
    |||||||||||||| |||||| ||||||| || | ||||||||||||| |||| |||||||| ||| ||||||||||||||||| ||||| || || | |    
T  14693980 cgattcactcgcaacggcgagcgacatctgggtttactcgcgaggcgaagggacttactcgcgaggcgagcgatgaagttcatcactcgcgagacgcgga 14694079  T
Q  118 tcagctactcgttatagtgagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaat 216  Q
    |||  |||| |  |  | |||||||||||||||||||||||||||| |||||||||||| |||||||| | |  ||||||||||||||||||||||| ||    
T  14694080 tcat-tacttgccaaggcgagcgatgaatgtcagctcgggcagaattgcagattttctc-aaaactcatctagttccatggttctaaccttaaaactgat 14694177  T
Q  217 tctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacc 315  Q
    ||||| | |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||| | ||    
T  14694178 tctaatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaacaggtttctactcttaattggtcaattctccaactttaaccc 14694277  T
Q  316 taactctcaa 325  Q
    ||| ||||||    
T  14694278 taattctcaa 14694287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 19 - 298
Target Start/End: Complemental strand, 18390614 - 18390331
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||| ||||||||||||||| |||| || || ||||||||||||||||  | ||||||||| ||| | ||||||||| | ||| ||||| ||||||||     
T  18390614 cgatttactcgcaatggcgagcgacaactgggttcactcgcgaggcgagaaggattactcgctaggcgggcgatgaagatgatcactcgcgaggcgagaa 18390515  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagct---cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaa 215  Q
     ||||||||| ||| | ||||||||||||||||||   |||||||||||||| ||||| | |||||| ||| || ||||    ||||||||||||||| |    
T  18390514 tagctactcgctatggcgagcgatgaatgtcagctctacgggcagaatgcag-ttttcacaaaaactaacctaattccacaactctaaccttaaaactga 18390416  T
Q  216 ttctaa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactctt-aattaatcaa 298  Q
    |||||| | |||||||||||||| ||||| ||||| |||||||||||||||||||| ||||| ||||| ||||| ||||||||||    
T  18390415 ttctaatcattgttctatgaataatctaaagtctggacactatttctacatcaattcaacagattcctgctcttaaattaatcaa 18390331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 292
Target Start/End: Original strand, 25141890 - 25142132
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaa-ggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagc 152  Q
    |||||||||| |||  | ||||||||||| || ||||||||||| | ||| ||||| |||||||| || ||||||| ||| |  || |||||||||||||    
T  25141890 actcgcgaggtgagaaggattactcgcaatggcgagcgatgaagatgatcactcgcgaggcgagaacaactactcgctatggcaagtgatgaatgtcagc 25141989  T
Q  153 tc---gggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtct 248  Q
    ||   ||||||||||||| ||||| | |||||||||| || ||||    ||||||||||||||| ||||||| | || ||||||||||| || |||||||    
T  25141990 tctacgggcagaatgcag-ttttcacaaaaactcacctaattccacaactctaaccttaaaactgattctaatcattcttctatgaataatccaaggtct 25142088  T
Q  249 gaacactatttctacatcaatttaacaggttcctactcttaatt 292  Q
    | |||||||||||||||||||||||||| |||||||||||||||    
T  25142089 ggacactatttctacatcaatttaacagattcctactcttaatt 25142132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 52 - 325
Target Start/End: Complemental strand, 24793123 - 24792848
Alignment:
Q  52 tcactcgcgaggcgaggggaat-tactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtca 150  Q
    |||||||||| ||||||||  | ||||||| ||| ||||||||||||||||| ||||| ||||||   |  ||||||| ||| | |||||||| ||||||    
T  24793123 tcactcgcgacgcgaggggtttctactcgctaggcgagcgatgaagttcatcactcgcgaggcgaaggcttctactcgctatggcgagcgatggatgtca 24793024  T
Q  151 gctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaatt-ctaaccttgttctatgaatagtctaaggtctg 249  Q
    |||||||||||||||||||||||||||||| ||||||||   |||| ||||||| |||||||| ||| |||   |  | ||||| ||  |||||||| ||    
T  24793023 gctcgggcagaatgcagattttctccaaaattcacccaatctcatgtttctaactttaaaactgattcctattatcatcctatggattatctaaggtttg 24792924  T
Q  250 aacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctcaa 325  Q
     ||||  |||||||||||||| |||||||| |||||||||||| |  |||||||||| ||| | ||||| ||||||    
T  24792923 tacacagtttctacatcaattcaacaggtttctactcttaattgactaattctccaattttaaccctaattctcaa 24792848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 315
Target Start/End: Complemental strand, 24834387 - 24834123
Alignment:
Q  52 tcactcgcgaggcgaggggaat-tactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtca 150  Q
    ||||||| |||||||||||  | ||||||| ||| ||||||||||||||||| ||||| ||||||   |  ||||||| ||| | || ||||||||||||    
T  24834387 tcactcgtgaggcgaggggtttctactcgctaggcgagcgatgaagttcatcactcgcgaggcgaaggcttctactcgctatggcgatcgatgaatgtca 24834288  T
Q  151 gctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaatt-ctaaccttgttctatgaatagtctaaggtctg 249  Q
    |||||| ||||||||||||||||||||||| ||||||||   |||| ||||||| |||||||| ||| |||   |  | ||||| ||  |||||||||||    
T  24834287 gctcggtcagaatgcagattttctccaaaattcacccaatctcatgtttctaactttaaaactgattcctattatcatcctatggattatctaaggtctg 24834188  T
Q  250 aacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacc 315  Q
     ||||  |||||||||||||| |||| ||| ||||| |||||| |  |||||||||| ||||||||    
T  24834187 tacacagtttctacatcaattcaacatgtttctacttttaattgactaattctccaa-ttttaacc 24834123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 290
Target Start/End: Original strand, 27852457 - 27852593
Alignment:
Q  154 cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacct-tgttctatgaatagtctaaggtctgaac 252  Q
    ||||||||||||| |||| |  ||||||||||| || |||||   ||||||||||||||| ||||||| |  | ||||||||||| ||||||||||| ||    
T  27852457 cgggcagaatgcaaattt-caacaaaactcacctaattccataactctaaccttaaaactgattctaatcaattttctatgaataatctaaggtctggac 27852555  T
Q  253 actatttctacatcaatttaacaggttcctactcttaa 290  Q
    |||||||||||||||||| ||||| || ||||||||||    
T  27852556 actatttctacatcaattcaacagatttctactcttaa 27852593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 3539542 - 3539763
Alignment:
Q  73 ttactcgcaa-ggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcaga 168  Q
    |||||||||| || ||||| ||||| | ||| ||||| |||||||| ||| |||| | ||| | |||||||||||||||| ||   |||||||||||||     
T  3539542 ttactcgcaatggcgagcggtgaagatgatcactcgcgaggcgagaacagttacttgctatggcgagcgatgaatgtcagttctacgggcagaatgcag- 3539640  T
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatca 267  Q
    ||||   ||||||||||| || |||||   |||||| |||||||| ||||||| | ||||||||||||||  ||||||| || ||||||| |||||||||    
T  3539641 ttttgaacaaaactcacctaattccataactctaactttaaaactgattctaatcattgttctatgaataacctaaggtttggacactatctctacatca 3539740  T
Q  268 atttaacaggttcctactcttaa 290  Q
    ||| ||||  || ||||||||||    
T  3539741 attcaacatatttctactcttaa 3539763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 34137527 - 34137720
Alignment:
Q  26 ctcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattac-tcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||||||||||||||||||| || ||||||||||||||| |   ||| | |||| ||| |||||||||| |||||| ||||| ||||||||   |||     
T  34137527 ctcgcaatggcgagtgacatctgggttcactcgcgaggcgaagaacatttcctcgcgaggcgagcgatgaacttcatcactcgcgaggcgagacatgctg 34137626  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    |||   |  | ||||||||||| ||||||||||||||||||||||||||   ||||  |||| ||   ||||||||||| ||||||||| ||||    
T  34137627 ctcacgagggcgagcgatgaatttcagctcgggcagaatgcagattttcatgaaaatgcacctaatcacatggttctaagcttaaaactgattc 34137720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 22259873 - 22259950
Alignment:
Q  199 tctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaaca 275  Q
    ||||||| ||||||| ||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  22259873 tctaaccctaaaactgattctaatcattgtactatgaataatctaaggtctgaacactatttctacatcaattcaaca 22259950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 44072369 - 44072484
Alignment:
Q  176 caaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaac 274  Q
    |||||||| ||||| |||||   |||||||  |||||| ||||||| | |||| ||||||||  |||||||||||||||||||||||||||||||| |||    
T  44072369 caaaactctcccaattccatatctctaaccccaaaactgattctaatcattgtactatgaatcatctaaggtctgaacactatttctacatcaattcaac 44072468  T
Q  275 aggttcctactcttaa 290  Q
    || || ||||| ||||    
T  44072469 agatttctactattaa 44072484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 23375692 - 23375777
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||||||    |||||| ||||| ||||||| |||| ||||||||  |||||||||||||||||||||| |||||||    
T  23375692 gagcgatgaatgtcagtataggcagattgcagtttttctcaaaaattcacccaatcccatggttctaaccttaaaactgattctaa 23375777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 12627372 - 12627306
Alignment:
Q  155 gggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| ||||| ||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||    
T  12627372 gggcagattgcagtttttctcaaaaattcacccaaacccattgttttaaccttaaaactaattctaa 12627306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 24505374 - 24505426
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  24505374 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 24505426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 31504271 - 31504323
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  31504271 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 31504323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 31506837 - 31506889
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  31506837 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 31506889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 18546421 - 18546336
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| |||||||||||||||||||||||||  | ||||  |||| ||   |||||||| || ||||||||| |||||||    
T  18546421 gagcgatgaatctcagctcgggcagaatgcagatttttacgaaaatccacctaatctcatggttcaaagcttaaaactgattctaa 18546336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 31756591 - 31756643
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  31756591 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 31756643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 41684208 - 41684156
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  41684208 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 41684156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 43946797 - 43946761
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||| |||||||||||||||||||||||||    
T  43946797 gagcgatgaatctcagctcgggcagaatgcagatttt 43946761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 44621601 - 44621653
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  44621601 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 44621653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 26393018 - 26393076
Alignment:
Q  58 gcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    |||||||||  |||||| ||||| ||| ||||||||||| ||||||||||| |||||||    
T  26393018 gcgaggcgaaaggaattgctcgcgaggcgagcgatgaagatcatccctcgcgaggcgag 26393076  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 21238554 - 21238502
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| | ||||||||||||||| |||||||    
T  21238554 ttttctcaaaaattcacccaaacccattggtctaaccttaaaactgattctaa 21238502  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 21241104 - 21241052
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| | ||||||||||||||| |||||||    
T  21241104 ttttctcaaaaattcacccaaacccattggtctaaccttaaaactgattctaa 21241052  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 25174631 - 25174667
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  25174631 gagcgatgaatgtcagcacgggcagaatacagatttt 25174667  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 44369780 - 44369736
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    |||||||||||||  ||||||||||||||||| ||||||| ||||    
T  44369780 gagcgatgaatgtaggctcgggcagaatgcagtttttctcaaaaa 44369736  T

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Target: scaffold0010 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 22 - 336
Target Start/End: Complemental strand, 126698 - 126382
Alignment:
Q  22 ttcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcag 121  Q
    |||||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||     
T  126698 ttcactcgcaatggcgaacgacaactaggttcactcgcgaggcgaggggaattactcgcaaggcgagcgatgaagttcatcactcgcgaggcgagatcaa 126599  T
Q  122 ctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| ||  | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||||||| ||| |||    
T  126598 ctactcgctaaggcgagcgatgaatgtcagctcgggcagaatgtagattttctcaaaaactcacccaattacatagttctaaccttaaaactgattataa 126499  T
Q  222 -ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaact 320  Q
     | |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |    
T  126498 tcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaataggttcctactcttaattaatcaattctccaacttttaacctaatt 126399  T
Q  321 ctc-aatcctcaaaact 336  Q
    ||| |||||||||||||    
T  126398 ctcaaatcctcaaaact 126382  T

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Target: scaffold0010; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 1249 - 1368
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagct 153  Q
    |||||||||||||||||| || ||||  | | |||||||||| |||||| ||||| |||||||| | ||| |||| |   | ||||||| ||||||||||    
T  1249 actcgcgaggcgaggggatttgctcgttatgcgagcgatgaacttcatcactcgcgaggcgagacctgctgctcgctgaggcgagcgataaatgtcagct 1348  T
Q  154 cgggcagaatgcagattttc 173  Q
    |||||||||||||| |||||    
T  1349 cgggcagaatgcagtttttc 1368  T

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Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 22254430 - 22254735
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||      
T  22254430 cgattcactcgcaatggcgagcgacatctgggctcactcgcgaggcgaggggaattactcgcaaggcgagcgatgaagttcatcactcgcgaggcgagga 22254529  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    |||||||||| ||  | |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||  ||||||||||||| ||||    
T  22254530 cagctactcgctaaggcgagcgatgaatgtcagctcgggcagaatgcagtttttctcaaaaactcacccaattccatggt--taaccttaaaactgattc 22254627  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||    
T  22254628 taatcattgttctatgaatagtctaaggtctggacactatttctacatcagttcaacaggttcctactcttaattaatcaattctccaacttttaacata 22254727  T
Q  318 actctcaa 325  Q
    | ||||||    
T  22254728 attctcaa 22254735  T

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Target: chr8; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 19 - 335
Target Start/End: Original strand, 17218356 - 17218674
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||| ||||||| || ||||| || || |||||||||||||| |||||||||||||||||| ||||| | ||||||||| ||||| |||||||||    
T  17218356 cgattcacttgcaatgg-gaatgacaactgggttcactcgcgaggcggggggaattactcgcaaggcgagcgttaaagttcatcactcgcgaggcgagat 17218454  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    |||||||||| ||| |  ||||||||||||||||||||||||||||||| ||||||  ||||||||| ||| ||||||||||||| ||||||||||||||    
T  17218455 cagctactcgctatggcaagcgatgaatgtcagctcgggcagaatgcagtttttcttaaaaactcactcaattccatggttctaatcttaaaactaattc 17218554  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaactttt-aacct 316  Q
    ||| | ||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  17218555 taatcattgttctgtgaatagtctaaggtctggacactatttctgcatcaattcaacaggttcctactcttaattaatcaattctccaacttttaaacct 17218654  T
Q  317 aactctc-aatcctcaaaac 335  Q
    || |||| ||||||||||||    
T  17218655 aattctcaaatcctcaaaac 17218674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 25 - 336
Target Start/End: Original strand, 19699820 - 19700134
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagct 123  Q
    |||||| |||||||| |||| ||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||| ||||||   |||||    
T  19699820 actcgctatggcgagcgacaactagggtcactcgcgaggcgaggggaaattacttgcaaggcgagcgatgaagttcatcactcgcgaggcgaagacagct 19699919  T
Q  124 actcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa-c 222  Q
    ||||| ||| | || |||||||||||||||||||||||||||| |||||||| |||||||| |||| | ||||||||||||||||||||| ||||||| |    
T  19699920 actcgctatggcgaacgatgaatgtcagctcgggcagaatgcaaattttctcaaaaactcatccaatttcatggttctaaccttaaaactgattctaatc 19700019  T
Q  223 cttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactct 322  Q
     |||||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||    
T  19700020 attgttctatgaatattctaaggtctggtcactaattctacatcaatttaacaggttcctattcttaattaatcaattcaccaacttttaacctaatcct 19700119  T
Q  323 c-aatcctcaaaact 336  Q
    | |||||||||||||    
T  19700120 caaatcctcaaaact 19700134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 20 - 318
Target Start/End: Original strand, 23419097 - 23419394
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatc 119  Q
    ||||||||||| |||||||| |||| ||||| ||||||| |||||||||||  |||||||||||| ||| ||||||||||||| ||||| ||||||||||    
T  23419097 gattcactcgctatggcgagcgacaactagggtcactcgtgaggcgaggggttttactcgcaaggcgagtgatgaagttcatcactcgcgaggcgagatc 23419196  T
Q  120 agctactcgttatagtgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    || |||||| ||| | ||||||||||||||||||||||||||| |||| ||||||| |||| |||| |||| || |||||||||||||||||||| ||||    
T  23419197 agttactcgctatggcgagcgatgaatgtcagctcgggcagaattgcatattttct-caaagctcatccaattcaatggttctaaccttaaaactgattc 23419295  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | |||||||||||||||||||||||||| |||| | |||||||||||||||||| ||| |||||||||||| ||||||  ||||||||||||||||    
T  23419296 taatcattgttctatgaatagtctaaggtctggacacaaattctacatcaatttaacatgtttctactcttaattgatcaat--tccaacttttaaccta 23419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 136 - 325
Target Start/End: Original strand, 23948034 - 23948224
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatga 234  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| ||||| || ||||||||||||||||||||||  ||||||| | |||||||||||    
T  23948034 gagcgatgaatgtcagctcgggcagaatgcagtttttctcaaaaattcacctaattccatggttctaaccttaaaacatattctaatcattgttctatga 23948133  T
Q  235 atagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctcaa 325  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23948134 atagtctaaggtctggacactatttctacatcaattcaacaggttcctactcttaattaatcaattctccaacttttaacctaattctcaa 23948224  T

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Target: chr8; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 22 - 325
Target Start/End: Complemental strand, 17907247 - 17906939
Alignment:
Q  22 ttcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcag 121  Q
    |||||||||||||||||| |||| || || ||||||||||||||||||||||||||||||||| ||||||||||| ||||| | ||| ||| ||||  ||    
T  17907247 ttcactcgcaatggcgagcgacaactgggttcactcgcgaggcgaggggaattactcgcaaggcgagcgatgaagatcatcacgcgcgaggagagagaag 17907148  T
Q  122 ctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctcc-aaaactcacc----caaatccatggttctaaccttaaaactaat 216  Q
    ||||||| ||| | | |||||||||||||||||||||||||| ||| ||||| || ||||||||||     || |||||| |||||||||||||||| ||    
T  17907147 ctactcgctatggcgggcgatgaatgtcagctcgggcagaatacag-ttttcaccaaaaactcacctaattaattccatgcttctaaccttaaaactgat 17907049  T
Q  217 tctaa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaactttt-aac 314  Q
    ||||| | |||||||||| ||| ||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||| |||||||||| |||    
T  17907048 tctaatcattgttctatggataatctaaggtctggacactatttctacatcaattcaacagattcccactcttaattaatcaatt-tccaacttttaaac 17906950  T
Q  315 ctaactctcaa 325  Q
    |||| ||||||    
T  17906949 ctaattctcaa 17906939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 36727438 - 36727129
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||| |||||||| |||||| |||| || || | ||||| |||||||| |||||||||||| ||| | ||||||||| | ||  ||||| ||||||||     
T  36727438 cgatttactcgcaaaggcgagcgacaactgggtttactcgtgaggcgagaggaattactcgctaggcgtgcgatgaagatgataactcgcgaggcgagaa 36727339  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaa 215  Q
    |||||||||| ||| | ||||||||||||| |||||   || |||||||||| ||||| | |||||||||| || |||||   ||||||||||||||| |    
T  36727338 cagctactcgctatggcgagcgatgaatgtaagctctacggacagaatgcag-ttttcacaaaaactcacctaattccataactctaaccttaaaactga 36727240  T
Q  216 ttctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaactt-ttaa 313  Q
    |||||| | |||||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| | ||    
T  36727239 ttctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagattcctactcttaattaatcaatt-tccaacttctaaa 36727141  T
Q  314 cctaactctcaa 325  Q
    ||||| ||||||    
T  36727140 cctaattctcaa 36727129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 309
Target Start/End: Complemental strand, 23900388 - 23900095
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgaga 117  Q
    ||||| |||||||||||| || ||||  | || | ||||| ||||||||  ||| |||||||| ||| ||||||||||| | ||| || || ||||||||    
T  23900388 cgatttactcgcaatggcaagcgacaaatgggtttactcgtgaggcgagaagaaattactcgctaggcgagcgatgaagatgatcacttgcgaggcgaga 23900289  T
Q  118 tcagctactcgttatagtgagcgatgaatgtcagct---cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaacta 214  Q
      ||||||||| ||| | ||||||||||||||||||   |||||| ||||||| ||||| | |||||||||| || |||||| ||||||||||||||||     
T  23900288 gaagctactcgctatggcgagcgatgaatgtcagctttacgggcataatgcag-ttttcacaaaaactcacctaattccatgattctaaccttaaaactg 23900190  T
Q  215 attctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaactt 309  Q
    | | ||| | ||| |||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  23900189 actgtaatcattgctctatgaataatctaaggtctggacactatttctacatcaattcaacagattcctactcttaattaatcaatt-tccaactt 23900095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 136 - 336
Target Start/End: Original strand, 18761221 - 18761422
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacctt-gttctatg 233  Q
    ||||||||| | |||||||||| ||||| |||||||||||| ||||||||| ||    |||||||||||||| |||||| ||||||| ||| ||||||||    
T  18761221 gagcgatgagtttcagctcgggtagaattgcagattttctc-aaaactcactcatcctcatggttctaacctcaaaactgattctaaactttgttctatg 18761319  T
Q  234 aatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctcaa-tcctcaa 332  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||  |  ||| |||||||||||||||||| ||||||||||  |||||| |||||||    
T  18761320 aatagtctaaggtctggacactatttctacatcaatttaaccgtttattcttctcaattaatcaattctccaa-ttttaacctagttctcaactcctcaa 18761418  T
Q  333 aact 336  Q
    ||||    
T  18761419 aact 18761422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 290
Target Start/End: Complemental strand, 31722893 - 31722619
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaa-ggtgagcgatgaagttcatccctcgcaaggcgaga 117  Q
    ||||| ||||||||||||||| |||| || || | ||||||||||||||  | ||| ||||||| || ||||||||||| | ||| || |  ||||||||    
T  31722893 cgatttactcgcaatggcgagcgacaactgggtttactcgcgaggcgagaaggattgctcgcaatggcgagcgatgaagatgatcacttgtgaggcgaga 31722794  T
Q  118 tcagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaacta 214  Q
     | | |||||| ||| | |||||||||||||||| ||   ||||||||||||| |||||  ||||||||||| || ||||||  |||||||||||||||     
T  31722793 actgttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaaaactcacc-aattccatgactctaaccttaaaactg 31722696  T
Q  215 attctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaa 290  Q
    ||||||| | |||||||||| |||  |||||||||| ||| || ||||||||||||| ||||| || ||||||||||    
T  31722695 attctaatcattgttctatggataacctaaggtctggacattaattctacatcaattcaacagatttctactcttaa 31722619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 37516296 - 37516457
Alignment:
Q  52 tcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcag 151  Q
    ||||||||||||||| |||  |||||||| ||| |||||||||| |||||| ||||| ||||||   |  | ||||| ||| | ||||||||||||||||    
T  37516296 tcactcgcgaggcgaagggttttactcgctaggcgagcgatgaacttcatcactcgcgaggcgaaggcttccactcgctatggcgagcgatgaatgtcag 37516395  T
Q  152 ctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    ||||||||||||||||||||||||| | | ||| ||||   |||| ||||||||||||||||    
T  37516396 ctcgggcagaatgcagattttctcctagaatcatccaatctcatgtttctaaccttaaaact 37516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 270
Target Start/End: Complemental strand, 20022427 - 20022178
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaa-ggtgagcgatgaagttcatccctcgcaaggcgagatcagct 123  Q
    ||||||||||| ||  |||| ||||| | |||||||||||||  |   |||||||||| || ||||||||||| | ||| ||||| |||||||| ||| |    
T  20022427 actcgcaatggtgatcgacaactaggtttactcgcgaggcgaaagaggttactcgcaatggcgagcgatgaagatgatcactcgcgaggcgagaacagtt 20022328  T
Q  124 actcgttatagtgagcgatgaatgtcagct---cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattcta 220  Q
    ||||| ||| | |||||||||||||||| |   ||| |||||||||| |||||  ||||||||||| || |||||   ||||||||||||| | ||||||    
T  20022327 actcgctatggcgagcgatgaatgtcagttctacggccagaatgcag-ttttcaacaaaactcacctaattccataactctaaccttaaaattgattcta 20022229  T
Q  221 a-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatt 270  Q
    | | ||||||||||||||  |||||||||  |||||| |||||||||||||    
T  20022228 atcattgttctatgaataacctaaggtctagacactaattctacatcaatt 20022178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 23947967 - 23948043
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaa 95  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  23947967 cgattcactcgcaatggcgagcgacatctgggttcactcgcgaggcgaggggaattactcgcaaggcgagcgatgaa 23948043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 276
Target Start/End: Complemental strand, 13661218 - 13660993
Alignment:
Q  52 tcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag-atcagctactcgttatagtgagcgatgaatgtca 150  Q
    |||||||||||||||  ||| || ||||| | | ||| ||||| ||||||||||||| ||||||| ||||  ||| ||  |  | |||||||||||||||    
T  13661218 tcactcgcgaggcgaaaggatttgctcgcgatgcgagtgatgatgttcatccctcgcgaggcgaggatcat-tacacgccagggcgagcgatgaatgtca 13661120  T
Q  151 gctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa-ccttgttctatgaatagtctaaggtct 248  Q
     |||||||||||| |||||||||||| |||||||| | || ||||||||||||||||||||||| |||||||   ||||| |||||||  ||||||||||    
T  13661119 actcgggcagaatcgcagattttctc-aaaactcatctaattccatggttctaaccttaaaactgattctaataattgttatatgaattatctaaggtct 13661021  T
Q  249 gaacactatttctacatcaatttaacag 276  Q
    | || |  |||||||||||| |||||||    
T  13661020 gtactcagtttctacatcaaattaacag 13660993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 13719777 - 13719636
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa-ccttgttctatg 233  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||||| | || ||||||||||||||||||||||| |||||||   ||||| ||||    
T  13719777 gagcgatgaatgtcaactcgggcagaatcgcagattttctc-aaaactcatctaattccatggttctaaccttaaaactgattctaataattgttatatg 13719679  T
Q  234 aatagtctaaggtctgaacactatttctacatcaatttaacag 276  Q
    |||  ||||||||||| || |  |||||||||||| |||||||    
T  13719678 aattatctaaggtctgtactcagtttctacatcaaattaacag 13719636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 19929087 - 19928897
Alignment:
Q  86 gagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcac 185  Q
    |||||||||| |||||||||||| |||||||    ||| ||||  |  | |||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  19929087 gagcgatgaacttcatccctcgcgaggcgaggcttgctgctcgcgagggcgagcgatgaatgtcagctcgggcaaaatgctgattttctccaaaaatcac 19928988  T
Q  186 ccaaatccatggttctaaccttaaaactaattctaa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaaca 275  Q
    | ||   ||||||||||||||||||||| |||| ||   |  ||||||| ||  ||||||||||| ||||  |||||||||||||| ||||    
T  19928987 ctaatctcatggttctaaccttaaaactgattccaattatcattctatggattatctaaggtctgtacacagtttctacatcaattcaaca 19928897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 17085664 - 17085497
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag-atcagctactcgttatagtgagcgatgaatgtcagc 152  Q
    ||||||||||||| ||||||| ||||| ||| ||||||||||||||||| ||| ||| ||||| |||| |  ||||| |  | |||||||||||||||||    
T  17085664 actcgcgaggcgaagggaattgctcgcgaggcgagcgatgaagttcatcactctcaatgcgaggatcatcc-ctcgtcagggcgagcgatgaatgtcagc 17085566  T
Q  153 tcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||| ||||||| | ||||  |||| ||   ||||||||||| ||||| ||| |||||||    
T  17085565 tcgggcagaatgctgattttcacgaaaatgcacctaatcacatggttctaagcttaagactgattctaa 17085497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 15003378 - 15003293
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||| |  |||||||| ||||| ||||||| |||| ||||||||  |||| |||||||||||||||||||||||||    
T  15003378 gagcgatgaatgtctgtacgggcagattgcagtttttctcaaaaattcacccaatcccattgttctaaccttaaaactaattctaa 15003293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 20501590 - 20501423
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag-atcagctactcgttatagtgagcgatgaatgtcagc 152  Q
    |||||||||| || ||||||| ||||| ||| ||||||||||||||||| ||||| ||| ||| |||| | |||||  |  | |||||||||||||||||    
T  20501590 actcgcgaggtgaagggaattgctcgcgaggcgagcgatgaagttcatcactcgcgaggtgaggatcatc-actcgccagggcgagcgatgaatgtcagc 20501492  T
Q  153 tcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||||| |||||   ||||  ||  |||||| ||||||||||| ||||||||| |||||||    
T  20501491 tcgggcagaatgcagtttttcatgaaaatgca-tcaaatcacatggttctaagcttaaaactgattctaa 20501423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 45469437 - 45469365
Alignment:
Q  199 tctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatt 270  Q
    ||||||||||||||| ||||||| | ||||||||||||||  |||||||||  ||||||||||||||||||||    
T  45469437 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 45469365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 10828934 - 10828848
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt-ctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||  |||||||| ||||| |||| ||| |||| ||||||||| |||| ||| |||||||||||||||||||||    
T  10828934 gagcgatgaatatcagtacgggcagattgcagttttttctcaaaaattcacccaaacccattgttttaaccttaaaactaattctaa 10828848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 28398195 - 28398299
Alignment:
Q  69 ggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag-atcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcag 167  Q
    |||||| ||||| ||| ||||||||||||||||| ||||| ||||||| |||| |  ||||  |  | ||||||||||| ||||||||||||||||||||    
T  28398195 ggaattgctcgcgaggcgagcgatgaagttcatcactcgcgaggcgaggatcatcc-ctcgcgagggcgagcgatgaatctcagctcgggcagaatgcag 28398293  T
Q  168 attttc 173  Q
    ||||||    
T  28398294 attttc 28398299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 43112802 - 43112887
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||| |||||| ||||  |||||||| ||||| ||||||| |||| ||||||||   ||||||||||||||||||||| |||||||    
T  43112802 gagcaatgaatatcagtacgggcagattgcagtttttctcaaaaattcacccaatctcatggttctaaccttaaaactgattctaa 43112887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9405140 - 9405088
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  9405140 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 9405088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 22252593 - 22252508
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||| ||||||||||||||||| |||||| | ||||  ||  |||||| ||||||||||| ||||||||| |||||||    
T  22252593 gagcgatgaatgtgagctcgggcagaatgcaaattttcacgaaaatgca-tcaaatcacatggttctaagcttaaaactgattctaa 22252508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 21414707 - 21414622
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  |||||| | ||||| |||||||||||| ||||||||  ||||||||||||||  ||||| ||||||||    
T  21414707 gagcgatgaataacagtacgggcaaattgcagtttttctccaaaattcacccaatcccatggttctaaccccaaaaccaattctaa 21414622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 22144865 - 22144780
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  ||| |||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  22144865 gagcgatgaataacagtacggccagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 22144780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 22984257 - 22984318
Alignment:
Q  55 ctcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    |||||||||||| || |||| ||| | ||||||||||||||||||||| ||||| |||||||    
T  22984257 ctcgcgaggcgaaggaaattgctcacgaggtgagcgatgaagttcatcactcgcgaggcgag 22984318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 6607704 - 6607652
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  6607704 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 6607652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 7300510 - 7300458
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  7300510 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 7300458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 16407140 - 16407077
Alignment:
Q  54 actcgcgaggcgaggggaatta-ctcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||||||||| |  |||||| || |||||||||| |||||||||||| |||||||    
T  16407140 actcgcgaggcgaggggaaatggctcgcatggcgagcgatgaacttcatccctcgcgaggcgag 16407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 21984679 - 21984597
Alignment:
Q  136 gagcgatgaatgtcagctcgggcag-aatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||||||||| ||||||||||||| || ||||||||||   |||| ||||||||  ||||||||||| |||||||||| ||||    
T  21984679 gagcgatgaatctcagctcgggcagaaacgcagattttc-ataaaaatcacccaatcccatggttctatccttaaaactgattc 21984597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 22996479 - 22996537
Alignment:
Q  55 ctcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggc 113  Q
    |||||||||||| || |||| ||||| ||| |||||||||||||||||| |||| ||||    
T  22996479 ctcgcgaggcgaaggcaattgctcgcgaggcgagcgatgaagttcatccgtcgcgaggc 22996537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 23844489 - 23844427
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||| |||||   |||||| || |||||||||| |||||||||||| |||||||    
T  23844489 actcgcgaggcgaagggaaaggctcgcatggcgagcgatgaacttcatccctcgcgaggcgag 23844427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 24707287 - 24707213
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaa 210  Q
    ||||||||||| ||||  ||| |||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||    
T  24707287 gagcgatgaatatcagtacggccagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaa 24707213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 17266421 - 17266384
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttc 173  Q
    |||||||||||||  |||||||||||||||||||||||    
T  17266421 gagcgatgaatgttggctcgggcagaatgcagattttc 17266384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 21685495 - 21685459
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  21685495 gagcgatgaatgtcagcacgggcagaatgcaggtttt 21685459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 21689844 - 21689808
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  21689844 gagcgatgaatgtcagcacgggcagaatgcaggtttt 21689808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22058836 - 22058784
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||| ||||| |||||||    
T  22058836 ttttctcaaaaattcacccaaacccattgttctaaccttgaaactgattctaa 22058784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 22318128 - 22318056
Alignment:
Q  199 tctaaccttaaaactaattctaaccttgtt-ctatgaatagtctaaggtctgaacactatttctacatcaatt 270  Q
    ||||||| ||||||| ||||||| | | || ||||||||| |||||||| ||||| || ||||||||||||||    
T  22318128 tctaaccctaaaactgattctaatcattttactatgaataatctaaggtttgaactctgtttctacatcaatt 22318056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 25 - 336
Target Start/End: Complemental strand, 25250219 - 25249907
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||| |||||||| | || || || ||||||||||||||||||||||||||||||||| ||||||||||||||||| || || |||||||  |||||     
T  25250219 actcgctatggcgagcggcaactgggttcactcgcgaggcgaggggaattactcgcaaggcgagcgatgaagttcatcacttgcgaggcgaggacagctg 25250120  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattcta-acc 223  Q
    |||| ||| | |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||||||| ||| ||  |     
T  25250119 ctcgctatggcgagcgatgaatgtcagctcgggcagaatacaggttttctcaaaaactcacccaaatccatggtcctaaccttaaaactgattatagtcg 25250020  T
Q  224 ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctc 323  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25250019 ttgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaattctc 25249920  T
Q  324 aatcctcaaaact 336  Q
    |||||||||||||    
T  25249919 aatcctcaaaact 25249907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 25 - 336
Target Start/End: Complemental strand, 25314004 - 25313691
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgagggg-aattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagct 123  Q
    |||||| |||||||| | || || || ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || || |||||||  |||||    
T  25314004 actcgctatggcgagcggcaactgggttcactcgcgaggcgagggggaattactcgcaaggcgagcgatgaagttcatcacttgcgaggcgaggacagct 25313905  T
Q  124 actcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc 223  Q
     |||| ||| | |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||||||| ||| ||  |    
T  25313904 gctcgctatggcgagcgatgaatgtcagctcgggcagaatacaggttttctcaaaaactcacccaaatccatggtcctaaccttaaaactgattatagtc 25313805  T
Q  224 -ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactct 322  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25313804 gttgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaattct 25313705  T
Q  323 caatcctcaaaact 336  Q
    ||||||||||||||    
T  25313704 caatcctcaaaact 25313691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 20 - 318
Target Start/End: Original strand, 10953745 - 10954044
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatc 119  Q
    |||||||| ||||||||||| ||||   ||| |||||||||||||||||||  |||||||||||| |||||||||| |||||||||||| |||||| |||    
T  10953745 gattcacttgcaatggcgagcgacaaaaaggttcactcgcgaggcgaggggttttactcgcaaggcgagcgatgaacttcatccctcgcgaggcgatatc 10953844  T
Q  120 agctactcgttatagtgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    || |||||| ||| | ||||||||||||||||||||||||||| || ||||||||| ||||||||| |||| || |||||||||||||||||||| ||||    
T  10953845 agttactcgctatggcgagcgatgaatgtcagctcgggcagaattgtagattttct-caaaactcatccaattcaatggttctaaccttaaaactgattc 10953943  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| | |||| ||| |||||||||||||    
T  10953944 taatcattgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaagtttctactcttaattgaccaatcctcaaacttttaaccta 10954043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 300
Target Start/End: Complemental strand, 21618325 - 21618043
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaa-ggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    |||| |||||||||||||||||||| || || | ||||| |||||||| | |||||||||| | || ||||||||||  | ||| ||||| ||||||||     
T  21618325 gatttactcgcaatggcgagtgacaactgggtttactcgtgaggcgagagaaattactcgctatggcgagcgatgaatatgatcactcgcgaggcgagaa 21618226  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagct---cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaa 215  Q
    |||||||||| ||||| |||||||||||||  |||   ||||||||||||||||||    ||||||||||| || |||||   ||||||||||||| | |    
T  21618225 cagctactcgctatagcgagcgatgaatgttggctctacgggcagaatgcagattt--cacaaaactcacctaattccataactctaaccttaaaattga 21618128  T
Q  216 ttctaa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactct-taattaatcaatt 300  Q
    |||||| | |||| ||||||||| |||||||| || ||||||  |||||||||||| ||||  ||||||||||  ||||||||||||    
T  21618127 ttctaatcattgtgctatgaataatctaaggtttggacacta--tctacatcaattcaacatattcctactctcaaattaatcaatt 21618043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 20469368 - 20469267
Alignment:
Q  224 ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctc 323  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||| ||||||||| ||||||| ||||    
T  20469368 ttgttctatgaataatctaaggtctggacactatttctacatcaattcaacagagtcctactcttaattaatcaattttccaactttaaacctaattctc 20469269  T
Q  324 aa 325  Q
    ||    
T  20469268 aa 20469267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 30616445 - 30616576
Alignment:
Q  195 tggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaatta 293  Q
    |||||||||| | |||||| ||||||| | |||||||||||||| | ||||||||| ||||||| ||||||||||| |||| | ||  |  |||||||||    
T  30616445 tggttctaacatcaaaactgattctaaacattgttctatgaatattataaggtctggacactatctctacatcaatctaaccgattattcatcttaatta 30616544  T
Q  294 atcaattctccaacttttaacctaactctcaa 325  Q
    |||||||||||| |||||||||||| ||||||    
T  30616545 atcaattctccatcttttaacctaattctcaa 30616576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 23476094 - 23476213
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagct 153  Q
    |||||||||||||||||| || ||||| ||| |||||||| | |||||| ||||| ||||||||   ||| |||| |   | ||||||||||||||||||    
T  23476094 actcgcgaggcgaggggatttgctcgctaggcgagcgatggacttcatcactcgcgaggcgagacttgctgctcgctgaggcgagcgatgaatgtcagct 23476193  T
Q  154 cgggcagaatgcagattttc 173  Q
    |||||||||||||| |||||    
T  23476194 cgggcagaatgcagtttttc 23476213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 25575090 - 25575005
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||||||||||||||| |||||||| | ||||  |||| |||  ||||||||||| ||||||||| |||||||    
T  25575090 gagcgatgaatctcagctcgggcagaatgtagattttcccgaaaatgcacctaaacacatggttctaagcttaaaactgattctaa 25575005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 25576283 - 25576198
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||||||||||||||| |||||||| | ||||  |||| |||  ||||||||||| ||||||||| |||||||    
T  25576283 gagcgatgaatctcagctcgggcagaatgtagattttcccgaaaatgcacctaaacacatggttctaagcttaaaactgattctaa 25576198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 29324668 - 29324616
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| |||||||||||||||||||||||||    
T  29324668 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactaattctaa 29324616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 43121836 - 43121888
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  43121836 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 43121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 43125369 - 43125421
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  43125369 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 43125421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 25573958 - 25573896
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||| ||| ||| ||||| ||| ||||||||||||||||| ||||| |||||||    
T  25573958 actcgcgaggcgaaggggattgctcgcgaggcgagcgatgaagttcatcactcgcgaggcgag 25573896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 25576344 - 25576290
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgc 108  Q
    ||||||||||||| ||| ||| ||||| ||| |||||||||||||||||||||||    
T  25576344 actcgcgaggcgaaggggatttctcgcgaggcgagcgatgaagttcatccctcgc 25576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 4398348 - 4398433
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||  ||| |||| | | | ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  4398348 gagcgatgaatatcagtacggccagattacgggttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 4398433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 26360586 - 26360501
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  ||| |||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  26360586 gagcgatgaataacagtacggccagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 26360501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 23470465 - 23470550
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||||||||||| ||||||||| ||||| | ||||  ||  ||| || ||||||||||| ||||||||| |||||||    
T  23470465 gagcgatgaatgtcagctcgggtagaatgcagtttttcacgaaaatgca-tcaattcacatggttctaagcttaaaactgattctaa 23470550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 25575151 - 25575097
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgc 108  Q
    ||||||||||||| ||| ||| ||| | ||| |||||||||||||||||||||||    
T  25575151 actcgcgaggcgaaggggattgctcacgaggcgagcgatgaagttcatccctcgc 25575097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 25573843 - 25573770
Alignment:
Q  148 tcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||||||| | |||||| | ||||  |||| |||  ||||||||||| ||||||||| |||||||    
T  25573843 tcagctcgggcagaatgtaaattttcacgaaaatgcacctaaacacatggttctaagcttaaaactgattctaa 25573770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 15193413 - 15193369
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    ||||||||||||||||  |||||||||||||| |||| |||||||    
T  15193413 gagcgatgaatgtcagtacgggcagaatgcaggttttttccaaaa 15193369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 16255382 - 16255330
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||| ||||||||||| |||||||    
T  16255382 ttttctcaaaaattcacccaaacccattgttctcaccttaaaactgattctaa 16255330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 16259015 - 16258963
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||| ||||||||||| |||||||    
T  16259015 ttttctcaaaaattcacccaaacccattgttctcaccttaaaactgattctaa 16258963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22589179 - 22589127
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||| ||||||||||| |||||||    
T  22589179 ttttctcaaaaattcacccaaacccattgttctcaccttaaaactgattctaa 22589127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22592734 - 22592682
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||| ||||||||||| |||||||    
T  22592734 ttttctcaaaaattcacccaaacccattgttctcaccttaaaactgattctaa 22592682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22596289 - 22596237
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||| ||||||||||| |||||||    
T  22596289 ttttctcaaaaattcacccaaacccattgttctcaccttaaaactgattctaa 22596237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 22880859 - 22880911
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||| | |||||||    
T  22880859 ttttctcaaaaattcacccaaacccattgttctaaccttaaaattgattctaa 22880911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 23694131 - 23694183
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| | ||||||||||||||| |||||||    
T  23694131 ttttctcaaaaattcacccaaacccattgctctaaccttaaaactgattctaa 23694183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 26496558 - 26496610
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| | ||||||||||||||| |||||||    
T  26496558 ttttctcaaaaattcacccaaacccattggtctaaccttaaaactgattctaa 26496610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 336
Target Start/End: Original strand, 21062295 - 21062614
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||  |||||| ||||  ||||||||     
T  21062295 cgattcactcgcaatggcgagcgacatctgggctcactcgcgaggcgaggggaattactcgcaaggcgagcgatgagtttcatcactcgtgaggcgagaa 21062394  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
     ||||||||| ||  | ||| ||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  21062395 tagctactcgctaaggcgagtgatgaatgtcagcacgggaagaatgcagtttttctcaaaaactcacccaaatccatggttctaaccttaacactaattc 21062494  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||    
T  21062495 taatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaacaggttcctacccttaattaatcaattctccaacttttaacata 21062594  T
Q  318 actctc-aatcctcaaaact 336  Q
    | |||| |||||||||||||    
T  21062595 attctcaaatcctcaaaact 21062614  T

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Target: chr4; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 20 - 318
Target Start/End: Complemental strand, 32466592 - 32466293
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatc 119  Q
    ||||||||||| |||||||| |||| ||||| |||||||||||||||||||  |||||||||||| ||||||||||||||||| ||||| ||| ||||||    
T  32466592 gattcactcgctatggcgagcgacaactagggtcactcgcgaggcgaggggttttactcgcaaggcgagcgatgaagttcatcactcgcgaggtgagatc 32466493  T
Q  120 agctactcgttatagtgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    || |||||| ||| | ||||||||||||||||||||||||||| ||| |||||||| ||||||||| |||| || |||||||||||||||||||| ||||    
T  32466492 agttactcgctatggcgagcgatgaatgtcagctcgggcagaattgctgattttct-caaaactcatccaattcaatggttctaaccttaaaacttattc 32466394  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  32466393 taatcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaaccta 32466294  T

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Target: chr4; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 20 - 318
Target Start/End: Original strand, 15612747 - 15613044
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaat-tactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||| |||||||| |||| || ||   |||||||||||||||||| | ||||||  ||| ||||||||||||||||| ||||| ||| |||      
T  15612747 gattcactcgccatggcgagcgacaactgggtctactcgcgaggcgaggggattctactcgttaggcgagcgatgaagttcatcactcgcgaggggagga 15612846  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    |||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||      
T  15612847 cagctactcgctatggcgagcgatgaatgtcagctcaggcagaatgcagattttct-caaaactcatccaattccatggttctaaccttaaaactgatca 15612945  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||||| ||||||||| ||||||||||||||    
T  15612946 taatcattgttctatgaatagtctaaggtctgaacactaattctacatcaatttaacaggtttcta--cttaattgatcaattcttcaacttttaaccta 15613043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 75 - 318
Target Start/End: Original strand, 51993272 - 51993515
Alignment:
Q  75 actcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaa-tgcagattttc 173  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||  || |||| ||| | ||||||||||||||||||||||||||| ||| |||||||    
T  51993272 actcgctaggtgagcgatgaagttcatcactcgcgaggcgagatcgtctgctcgctatggcgagcgatgaatgtcagctcgggcagaattgccgattttc 51993371  T
Q  174 tccaaaactcacccaaatccatggttctaaccttaaaactaattctaa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaattta 272  Q
    | ||||||||| |||| || |||||| ||||||||||||| ||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| |||    
T  51993372 t-caaaactcatccaattcaatggttttaaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaaatta 51993470  T
Q  273 acaggttcctactcttaattaatcaattctccaacttttaacctaa 318  Q
    | ||||| |||||||||||| |||||||||||||||||||||||||    
T  51993471 ataggtt-ctactcttaattgatcaattctccaacttttaacctaa 51993515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 25 - 336
Target Start/End: Original strand, 20873 - 21169
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagct 123  Q
    |||||| |||||||| |||| ||||| ||||| |||||||||||| || |||||| ||||| ||||||||||||||||| ||||| |||||||  || ||    
T  20873 actcgctatggcgagcgacaactagggtcacttgcgaggcgagggaaaattactcacaaggcgagcgatgaagttcatcactcgcgaggcgaggacaact 20972  T
Q  124 actcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa-ctcacccaaatccatggttctaaccttaaaactaattctaac 222  Q
    ||||| ||  | ||||||||||||||||||||| |||||||||||||||||| |||| |||| |||| |||||                   |||||||     
T  20973 actcgctaaggcgagcgatgaatgtcagctcggacagaatgcagattttctcaaaaaactcatccaattccat-------------------attctaat 21053  T
Q  223 c-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactc 321  Q
    | ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  21054 cattgttctatgaatagtctaaggtctggtcactaattctacatcaatttaacaggttcctactcttaattaatcaattcaccaacttttaacctaattc 21153  T

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Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 52 - 275
Target Start/End: Original strand, 50160774 - 50160998
Alignment:
Q  52 tcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcag 151  Q
    ||||||||||||||| |||  || ||||| ||| |||||||| | |||||| ||||| ||||||||  |||| |||| |   | ||||||||||||||||    
T  50160774 tcactcgcgaggcgaagggttttgctcgctaggcgagcgatggacttcatcactcgcgaggcgagactagctgctcgctggggcgagcgatgaatgtcag 50160873  T
Q  152 ctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattct-aaccttgttctatgaatagtctaaggtctga 250  Q
    ||||||||||||||| |||||||| |||  ||||||||  ||||||||||||||||| |||| ||||| ||| |  | ||||||||  |||||||||||     
T  50160874 ctcgggcagaatgcaaattttctcaaaatttcacccaatcccatggttctaaccttagaactgattctaaacatcatcctatgaattatctaaggtctgt 50160973  T
Q  251 acactatttctacatcaatttaaca 275  Q
    |||   |||||||||||||| ||||    
T  50160974 acatagtttctacatcaattcaaca 50160998  T

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Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 19739401 - 19739593
Alignment:
Q  26 ctcgcaatggcgagtgacatctaggctcactcgcgaggcgagggg-aattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||| |||||||  |||||| || ||||||||||||||||||| || ||||||  ||| |||| |||| ||||||| ||||| |||||||   ||||     
T  19739401 ctcgcagtggcgagcaacatctggg-tcactcgcgaggcgagggggaactactcgttaggcgagcaatgatgttcatcactcgcgaggcgaggctagctg 19739499  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    |||| |   | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||| |||||| ||||||||| ||||    
T  19739500 ctcgctggggcgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaaatcacccaatctcatgtttctaatcttaaaactgattc 19739593  T

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Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 14852384 - 14852217
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagct 153  Q
    |||||||||| || ||||||| ||||| ||| |||||||||| |||||||||||| ||||||||  |||| ||||  |  ||||||||||||||||||||    
T  14852384 actcgcgaggtgaagggaattgctcgcgaggcgagcgatgaacttcatccctcgcgaggcgagacaagctgctcgcgagggtgagcgatgaatgtcagct 14852285  T
Q  154 cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
     |||||||||||| |||||  | ||||  || | |||  ||||||||||| ||||||||| |||||||    
T  14852284 tgggcagaatgcatatttttacgaaaatccatcaaaacacatggttctaagcttaaaactgattctaa 14852217  T

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Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 276
Target Start/End: Original strand, 27996502 - 27996705
Alignment:
Q  74 tactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttc 173  Q
    ||||||| ||| |||||||||| |||||| ||||| ||||||||  |||| |||| |   | ||||||||||||||| ||||| ||||||||||||||||    
T  27996502 tactcgctaggcgagcgatgaacttcatcactcgcgaggcgagactagctgctcgctggggcgagcgatgaatgtcatctcggacagaatgcagattttc 27996601  T
Q  174 tccaaaactcacccaaatccatggttctaaccttaaaactaattctaaccttgttc-tatgaatagtctaaggtctgaacactatttctacatcaattta 272  Q
    || |||| ||||||||   |||| |||||||||||||||| |||| ||   |  || |||| ||  ||||||||||| |||| |||||||||| ||||||    
T  27996602 tctaaaaatcacccaatctcatgtttctaaccttaaaactgattccaattatcctcatatggattatctaaggtctgtacacaatttctacattaattta 27996701  T
Q  273 acag 276  Q
    ||||    
T  27996702 acag 27996705  T

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Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 148 - 336
Target Start/End: Complemental strand, 35811643 - 35811454
Alignment:
Q  148 tcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacctt-gttctatgaatagtctaagg 245  Q
    |||||||||||||||| | |||||||||| ||||||||  ||    |||||||||||||| |||||| ||||||| ||| |||||||||||| |||||||    
T  35811643 tcagctcgggcagaattgtagattttctc-aaaactcaatcatcctcatggttctaacctcaaaactgattctaaactttgttctatgaatattctaagg 35811545  T
Q  246 tctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctcaa-tcctcaaaact 336  Q
    | || |||||||||||||||||||||||| | ||  |  ||  || ||||||||||||||| ||||||||||  |||||| |||||||||||    
T  35811544 tatggacactatttctacatcaatttaaccgtttattcttcacaaataatcaattctccaa-ttttaacctagttctcaactcctcaaaact 35811454  T

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Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 212
Target Start/End: Complemental strand, 13591430 - 13591272
Alignment:
Q  55 ctcgcgaggcgagggg-aattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagct 153  Q
    |||||||||||||||  |||| ||||| ||| |||||||||  |||||| ||||| |||||| |   ||| |||| ||| | ||||||||||||||||||    
T  13591430 ctcgcgaggcgagggacaattgctcgcgaggcgagcgatgatcttcatcactcgcgaggcgaaaggtgctgctcgctatggcgagcgatgaatgtcagct 13591331  T
Q  154 cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaac 212  Q
    ||||||||||||| ||||||||| ||| ||| ||||   |||| |||||| ||||||||    
T  13591330 cgggcagaatgcaaattttctcctaaaatcatccaatctcatgtttctaaacttaaaac 13591272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 15792386 - 15792505
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag-atcagctactcgttatagtgagcgatgaatgtcagc 152  Q
    ||||||||||||| ||||||| ||||| ||| ||||||||||||||||| ||| | | ||||| |||| | |||||  |  | |||||||||||||||||    
T  15792386 actcgcgaggcgaagggaattgctcgcgaggcgagcgatgaagttcatcactcacgacgcgaggatcatc-actcgcgagggcgagcgatgaatgtcagc 15792484  T
Q  153 tcgggcagaatgcagattttc 173  Q
    |||||||||||||||||||||    
T  15792485 tcgggcagaatgcagattttc 15792505  T

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Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 14651397 - 14651479
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||| ||||| ||   ||||||||||||||||||||| ||||    
T  14651397 gagcgatgaatttcttctcgggcagaatgcagattttctccaaaattcacctaatctcatggttctaaccttaaaactgattc 14651479  T

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Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 8711305 - 8711390
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||||||  |||||||| ||||| ||||||| |||| ||||||||   ||||||||||||||||||||| |||||||    
T  8711305 gagcgatgaatgtcagtacgggcagattgcagtttttctcaaaaattcacccaatctcatggttctaaccttaaaactgattctaa 8711390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 33661869 - 33661783
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaac 222  Q
    |||||||||||||| |  |||||||| ||||| ||||||| |||| ||||||||  |||| ||||||||||||||||| ||||||||    
T  33661869 gagcgatgaatgtctgtacgggcagattgcagtttttctcaaaaattcacccaatcccattgttctaaccttaaaactgattctaac 33661783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 21189240 - 21189155
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||||||  |||||||| ||||| ||||||| |||| |||| |||   ||||||||||||||||||||| |||||||    
T  21189240 gagcgatgaatgtcagtacgggcagattgcagtttttctcaaaaattcactcaatcacatggttctaaccttaaaactgattctaa 21189155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 15365421 - 15365377
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  15365421 gagcgatgaatgtcagctcgggcagaattcagattttctccaaaa 15365377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 10314334 - 10314419
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| || |  |||||||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  10314334 gagcgatgaatatcggtacgggcagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 10314419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 41792312 - 41792397
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  |||||||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  41792312 gagcgatgaataacagtacgggcagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 41792397  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 4171696 - 4171748
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  4171696 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 4171748  T

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Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 14699388 - 14699440
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  14699388 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 14699440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 31116499 - 31116447
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  31116499 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 31116447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 38980230 - 38980153
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    |||||||||||  |||  |||||||| | ||| ||||||| |||| ||||||||| |||| |||||||||||||||||    
T  38980230 gagcgatgaataacagtacgggcagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaact 38980153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 287764 - 287816
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  287764 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 287816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 15279532 - 15279480
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  15279532 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 15279480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 16043730 - 16043806
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaa 211  Q
    ||||||||||| ||||||||||||||| |||| |||||| | |||| ||||| ||   |||||||||||||||||||    
T  16043730 gagcgatgaatttcagctcgggcagaattgcatattttcacaaaaaatcacctaatcacatggttctaaccttaaaa 16043806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 40907637 - 40907721
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgagggga-attactcgcaaggtgagcgatgaagttcatccctcgc 108  Q
    |||||| ||||||||  |||||| || |||||||||||||||||| | ||| ||||| | | ||||||||||||||||| |||||    
T  40907637 actcgctatggcgagcaacatctgggttcactcgcgaggcgagggaagattgctcgcgaagcgagcgatgaagttcatcactcgc 40907721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 47126271 - 47126219
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  47126271 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 47126219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 55502194 - 55502142
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  55502194 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 55502142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 1102041 - 1101956
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  ||| |||| | ||| ||||||| |||| ||||||||| |||| ||||||||||| ||||| |||||||    
T  1102041 gagcgatgaatcacagtacggtcagattacagtttttctcaaaaattcacccaaacccattgttctaaccttgaaactgattctaa 1101956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 13878555 - 13878640
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||| |  ||| |||| | ||| ||||||| |||| ||||||||  |||| ||||||||||||||| | |||||||    
T  13878555 gagcgatgaatgtctgtacggacagattacagtttttctcaaaaattcacccaatcccattgttctaaccttaaaattgattctaa 13878640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 18165698 - 18165662
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  18165698 gagcgatgaatgtcagcacgggcagaatgcaggtttt 18165662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 28383498 - 28383550
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||| ||||| |||||||    
T  28383498 ttttctcaaaaattcacccaaacccattgttctaaccttgaaactgattctaa 28383550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 40907728 - 40907803
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaa 211  Q
    ||||||||||| ||||||||||||||| |||||||||||   |||| ||||||||   ||||||| |||||||||||    
T  40907728 gagcgatgaatttcagctcgggcagaattgcagattttc-ataaaaatcacccaatctcatggttttaaccttaaaa 40907803  T

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Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 19 - 315
Target Start/End: Complemental strand, 11885955 - 11885658
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| || | |||||||||||| || ||||||| ||||    
T  11885955 cgattcactcgcaatggcgagcgacatctgggctcactcgtgaggcgaggggaattactcgcaaggcgaacaatgaagttcatcactagcaaggctagat 11885856  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||  |||| || |||||||||||||  ||||||||||||| |||||||| ||||    
T  11885855 cagctactcgctacggtgagcgatgaatgtcagctcgggcagaatgcaatttttatcaaaaactcacccaatcccatggttctaacattaaaactgattc 11885756  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacc 315  Q
    ||| | |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11885755 taatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaacaggttcctactcttaattaatcaattctccaacttttaacc 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 134 - 318
Target Start/End: Complemental strand, 12509633 - 12509448
Alignment:
Q  134 gtgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttcta 231  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||| || |||||||||||||||||||| ||||||| | || |||||    
T  12509633 gtgagcgatgaatgacagctcgggcagaagtgcagattttctc-aaaactcatccaattcaatggttctaaccttaaaactgattctaatcattattcta 12509535  T
Q  232 tgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaa 318  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12509534 tgaattgtctaaggtctggacactagttctacatcaatttaacaggtttctactcttaattaatcaattctccaacttttaacctaa 12509448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 309
Target Start/End: Original strand, 13185631 - 13185839
Alignment:
Q  104 ctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaactcacccaaatccatggttc 200  Q
    ||||| |||||||| |||||||||| ||| | ||| |||||||||||||||   ||||||||||||| ||||| | |||||||||| || |||||   ||    
T  13185631 ctcgcgaggcgagaacagctactcgctatggcgagtgatgaatgtcagctctacgggcagaatgcagtttttc-caaaaactcacctaattccataactc 13185729  T
Q  201 taaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactctt-aattaatcaa 298  Q
    ||||||||||||| ||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||| || || ||||||||||| ||||||||||    
T  13185730 taaccttaaaactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaatagattcctactcttaaattaatcaa 13185829  T
Q  299 ttctccaactt 309  Q
    || ||||||||    
T  13185830 tt-tccaactt 13185839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 136 - 318
Target Start/End: Complemental strand, 14250362 - 14250179
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaaccttgttcta-tg 233  Q
    ||||||||||||||||||||||||||| ||||||||||||  | |||||| |||| || |||||||||||||||||||| ||||||| | |  |||  ||    
T  14250362 gagcgatgaatgtcagctcgggcagaagtgcagattttcta-ataactcatccaattcaatggttctaaccttaaaactgattctaatcatcatcttgtg 14250264  T
Q  234 aatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaa 318  Q
    |||| ||||||||||| |||||| ||||||||||| |||||| ||| |||||||||||| | |||||| ||||||||||||||||    
T  14250263 aatattctaaggtctggacactaattctacatcaacttaacaagtttctactcttaattgaccaattccccaacttttaacctaa 14250179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 191 - 336
Target Start/End: Original strand, 16050754 - 16050901
Alignment:
Q  191 tccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactctta 289  Q
    |||||||||||||| |||||||| ||||||| | |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  16050754 tccatggttctaacattaaaactgattctaatcattgttctatgaataatctaaggtatggacactatttctacatcaattcaacaggttcctactctta 16050853  T
Q  290 attaatcaattctccaactt-ttaacctaactctc-aatcctcaaaact 336  Q
    ||||||||||| ||||| || | ||||||| |||| |||||||||||||    
T  16050854 attaatcaatt-tccaatttctaaacctaattctcaaatcctcaaaact 16050901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 25 - 325
Target Start/End: Complemental strand, 15447258 - 15446958
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||||||||||||  |  ||| |||| |||||||||||||||||  |||||||| ||| |||| ||||| |||||| ||||| ||||||   |   ||    
T  15447258 actcgcaatggcgagcaagttctgggcttactcgcgaggcgagggggtttactcgctaggcgagcaatgaacttcatcactcgcgaggcgactactcata 15447159  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc 223  Q
    ||||     | ||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||   | |||||| ||| | |||||| |||||||      
T  15447158 ctcgcctgggcgagcgatgaatgtcagctcggacagaattgcagattttctc-aaaactcactcaatctcttggttccaacatcaaaactgattctaaga 15447060  T
Q  224 -ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactct 322  Q
     |||||||||||||||||||||| ||| ||||||||||||||||||| |||| | ||  |  |||||||| |||||||||||| | |||||||||| |||    
T  15447059 attgttctatgaatagtctaaggactggacactatttctacatcaatctaaccgattattcatcttaattcatcaattctccatc-tttaacctaattct 15446961  T
Q  323 caa 325  Q
    |||    
T  15446960 caa 15446958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 16050617 - 16050750
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatcc---ctcgcaaggcgagatca 120  Q
    ||||||||||||||| |||| || || ||||||||||||||||||||| |||||||| ||||||||||||||| |||||    ||||| |||||||| ||    
T  16050617 actcgcaatggcgagcgacaactgggttcactcgcgaggcgaggggaaattactcgctaggtgagcgatgaagatcatcatcactcgcgaggcgagagca 16050716  T
Q  121 gctactcgttatagtgagcgatgaatgtcagctc 154  Q
    |||||||| ||| | |||||||||||||||||||    
T  16050717 gctactcgctatggcgagcgatgaatgtcagctc 16050750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 11563387 - 11563621
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgc-aaggtgagcgatgaagttcatccctcgcaaggcgaga 117  Q
    ||||| ||||||||||||||| |||| |  || | |||||||||||||| | ||||| |||| | || ||||||||||| | | | ||| | ||||||||    
T  11563387 cgatttactcgcaatggcgagcgacaacagggtttactcgcgaggcgagagaaattattcgctatggcgagcgatgaagatgaccactcacgaggcgaga 11563486  T
Q  118 tcagctactcgttatagtgagcgatgaatgtcagct---cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaacta 214  Q
      || |||||| ||| | |||||||||||||||| |   |||||||||||||| |||||  ||||||||||| || |||||   |||||||||||||||     
T  11563487 gaagttactcgctatggcgagcgatgaatgtcagttctgcgggcagaatgcag-ttttcaacaaaactcacctaattccataactctaaccttaaaactg 11563585  T
Q  215 attctaa-ccttgttctatgaatagtctaaggtctg 249  Q
    ||||||| | ||||||||||||||  ||||||||||    
T  11563586 attctaatcattgttctatgaataacctaaggtctg 11563621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 15009637 - 15009552
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||  |||||||| ||||| ||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||    
T  15009637 gagcgatgaatatcagtacgggcagattgcaggttttctcaaaaattcacccaaacccattgttttaaccttaaaactaattctaa 15009552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 9578236 - 9578454
Alignment:
Q  54 actcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag-atcagctactcgttatagtgagcgatgaatgtcag 151  Q
    |||||||||||||||| || || ||||| ||| ||| ||||||||||||| ||||| ||||||| |||| |  ||||  |  | ||||||||||| ||||    
T  9578236 actcgcgaggcgagggaaaattgctcgcgaggcgagtgatgaagttcatcactcgcgaggcgaggatcatcc-ctcgccagggcgagcgatgaatatcag 9578334  T
Q  152 ctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattct-aaccttgttctatgaatagtctaaggtctga 250  Q
    |||||| ||||||||||||||  | ||||  || | |||  ||||||||||| ||||||||||||||| ||| |    ||||||||  |||||||||||     
T  9578335 ctcgggtagaatgcagatttttacgaaaatccatcaaaacacatggttctaagcttaaaactaattctaaacatcaccctatgaattatctaaggtctgt 9578434  T
Q  251 acactatttctacatcaatt 270  Q
    ||||  ||||||||||||||    
T  9578435 acacactttctacatcaatt 9578454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 14604587 - 14604713
Alignment:
Q  87 agcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacc 186  Q
    |||||||||||||||| ||||| ||| |||   |||| |||| |   | |||||||||||||||||||||||||||||||||||||||| ||||  |||     
T  14604587 agcgatgaagttcatcactcgcgaggtgaggcaagctgctcgctgaggcgagcgatgaatgtcagctcgggcagaatgcagattttctcaaaaatacaca 14604686  T
Q  187 caaatccatggttctaaccttaaaact 213  Q
     ||   ||||||||||||||| |||||    
T  14604687 taatctcatggttctaacctttaaact 14604713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 603120 - 603035
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||  | |||||| ||||| ||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||    
T  603120 gagcgatgaatatcagtacaggcagattgcagtttttctcaaaaattcacccaaacccattgttttaaccttaaaactaattctaa 603035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 12512090 - 12512025
Alignment:
Q  52 tcactcgcgaggcgaggggaat-tactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    |||||||||||||||||||  | ||||||||||| ||||||||||||||||||||||| |||||||    
T  12512090 tcactcgcgaggcgaggggtttctactcgcaaggagagcgatgaagttcatccctcgcgaggcgag 12512025  T

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Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 37428388 - 37428473
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||  |||  ||   ||||||||||||||||||||| |||||||    
T  37428388 gagcgatgaatttcagctcgggcagaatgcagattttcacgaaaatgcacataatcacatggttctaaccttaaaactgattctaa 37428473  T

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Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 30205888 - 30205803
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||| |  |||||||| ||||| ||||||| |||| ||||||||   ||| ||||||||||||||||| |||||||    
T  30205888 gagcgatgaatgtctgtacgggcagattgcagtttttctcaaaaattcacccaatctcattgttctaaccttaaaactgattctaa 30205803  T

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Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 11201995 - 11202077
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||||||||| ||||||| | |||| ||||| || |||| |||| ||||| ||  |||||||||||||||||||||| ||||    
T  11201995 gagcgatgaatttcagctcagacagattgcagtttgtctcaaaaattcaccaaatcccatggttctaaccttaaaactgattc 11202077  T

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Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 32402461 - 32402376
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||| || ||| |||| ||||||||||| |||||| || |||||||    
T  32402461 gagcgatgaatctcagctcgagcagaatgcagattttcacgaaaa-tccccctaatcacatggttctaagcttaaagctgattctaa 32402376  T

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Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 15265775 - 15265836
Alignment:
Q  55 ctcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    |||||||||||| ||||||| ||||| ||| |||||||||| |||||| ||||| |||||||    
T  15265775 ctcgcgaggcgaagggaattgctcgcgaggcgagcgatgaacttcatcactcgcgaggcgag 15265836  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 839778 - 839842
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||| |||||   |||||  || ||||||||||||||||||||||| |||||||||    
T  839778 actcgcgaggcgaagggaagggctcgcgtggcgagcgatgaagttcatccctcgcgaggcgagat 839842  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 2034429 - 2034377
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  2034429 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 2034377  T

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Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 2037936 - 2037884
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  2037936 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 2037884  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 2041677 - 2041625
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  2041677 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 2041625  T

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Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 7633038 - 7633090
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||    
T  7633038 ttttctcaaaaattcacccaaacccattgttttaaccttaaaactaattctaa 7633090  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 11889215 - 11889251
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||||||||    
T  11889215 gagcgatgaatgtcagcacgggcagaatgcagatttt 11889251  T

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Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 14038851 - 14038903
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  14038851 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 14038903  T

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Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 14042319 - 14042371
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  14042319 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 14042371  T

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Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 54974058 - 54974110
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| |||||||||||||||||| |||| |||||||    
T  54974058 ttttctcaaaaattcacccaattccatggttctaaccttagaactgattctaa 54974110  T

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Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 54976668 - 54976720
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| |||||||||||||||||| |||| |||||||    
T  54976668 ttttctcaaaaattcacccaattccatggttctaaccttagaactgattctaa 54976720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 54979278 - 54979330
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| |||||||||||||||||| |||| |||||||    
T  54979278 ttttctcaaaaattcacccaattccatggttctaaccttagaactgattctaa 54979330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 16747413 - 16747351
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||| ||||||| |||||  || ||||||||||| ||||| ||||| |||||||    
T  16747413 actcgcgaggcgaagggaattgctcgcgtggcgagcgatgaagctcatcactcgcgaggcgag 16747351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 16758145 - 16758083
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||| ||||||| |||||  || ||||||||||| ||||| ||||| |||||||    
T  16758145 actcgcgaggcgaagggaattgctcgcgtggcgagcgatgaagctcatcactcgcgaggcgag 16758083  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 30066528 - 30066590
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||| |||||   |||||  || ||||||||||||||||||||||| |||||||    
T  30066528 actcgcgaggcgaagggaagggctcgcgtggcgagcgatgaagttcatccctcgcgaggcgag 30066590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 39231365 - 39231450
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  ||| |||| | ||| ||||||| |||| ||||| ||| |||| ||||||||||||||||| |||||||    
T  39231365 gagcgatgaataacagtacggccagattacagtttttctcaaaaattcaccaaaacccattgttctaaccttaaaactgattctaa 39231450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 12037434 - 12037390
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    |||||||||||||  ||||||||||||||||| ||||||| ||||    
T  12037434 gagcgatgaatgtaggctcgggcagaatgcagtttttctcaaaaa 12037390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 12153623 - 12153659
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  12153623 gagcgatgaatgtcagcgcgggcagaatgcaggtttt 12153659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 28350693 - 28350629
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||| |||||   |||||  || ||||||||||||||||| ||||| |||||||||    
T  28350693 actcgcgaggcgaagggaagggctcgcgtggcgagcgatgaagttcatcactcgcgaggcgagat 28350629  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 41201338 - 41201306
Alignment:
Q  86 gagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||||||||||||| |||||||||    
T  41201338 gagcgatgaagttcatccctcgcgaggcgagat 41201306  T

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Target: chr1 (Bit Score: 186; Significance: 1e-100; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 25 - 325
Target Start/End: Original strand, 45755181 - 45755481
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||| |||||||| || | ||||| ||||||||||||||| ||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||    
T  45755181 actcgctatggcgagcgaaaactaggttcactcgcgaggcgatgggaattactcgcaaggcgggcgatgaagttcatcactcgctaggcgagatcagcta 45755280  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa-cc 223  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||| |     
T  45755281 ctcgttatggcgagcgatgaatgtcagctcgggcagaatgcagattttctcaaaaactcactcaaatccatggttctaaccgtaaaactgattctaatca 45755380  T
Q  224 ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctc 323  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||| |||||||||| ||||    
T  45755381 ttgttctattaatagtctaaagtctggacactatttctacatcaattcaacaaattcctactcttaattaattaattctccaac-tttaacctaattctc 45755479  T
Q  324 aa 325  Q
    ||    
T  45755480 aa 45755481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 20 - 336
Target Start/End: Original strand, 42697438 - 42697757
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||||||||||||||| |||||   ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||    
T  42697438 gattcactcgcaatggcgagtgacaactaggtgtactcgcgaggcgaggggaagttactcgcaaggcgagcgatgaagttcatcactcgcgaggcgagat 42697537  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||| |||||| ||  | |||||||||||||||||||||| ||||||||||||||||| |||||||| |||| | ||||||||||||  ||||||| ||||    
T  42697538 cagttactcgctaaggggagcgatgaatgtcagctcgggtagaatgcagattttctcaaaaactcatccaatttcatggttctaactataaaactgattc 42697637  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | ||||| ||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  42697638 taatcattgttttatgaatagtctaaggtatggacactaattctacatcaatttaactggttcctactcttaattgatcaattctccaacttttaaccta 42697737  T
Q  318 actctc-aatcctcaaaact 336  Q
    | |||| |||||||||||||    
T  42697738 attctcaaatcctcaaaact 42697757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 104 - 325
Target Start/End: Original strand, 24727122 - 24727344
Alignment:
Q  104 ctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttcta 202  Q
    ||||| |||||||||||| |||||| ||| | |||| ||||||||||||||||||||||| ||| |||||||| |||||||| | || || ||||||||     
T  24727122 ctcgcgaggcgagatcagttactcgctatggcgagcaatgaatgtcagctcgggcagaattgcaaattttctc-aaaactcatcaaattcaatggttctg 24727220  T
Q  203 accttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattc 301  Q
    || |||||||| | ||||| | |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24727221 actttaaaactgactctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacagattcctactcttaattaatcaattc 24727320  T
Q  302 tccaacttttaacctaactctcaa 325  Q
    ||||||||||||||||| ||||||    
T  24727321 tccaacttttaacctaattctcaa 24727344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 49 - 325
Target Start/End: Complemental strand, 12328110 - 12327833
Alignment:
Q  49 ggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgt 148  Q
    |||| |||||||||||||||||  |||||||| ||||||| |||||| |||||| ||||| ||||||   |   ||||||  |  | |||||||||||||    
T  12328110 ggcttactcgcgaggcgagggggtttactcgctaggtgagtgatgaacttcatcactcgcgaggcgactactcatactcgccagggcgagcgatgaatgt 12328011  T
Q  149 cagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggt 246  Q
    ||| ||||||||||| |||||||||||| ||||||||| |||   | |||||||||||| |||||| ||||||| | ||||||| |||||||||||||||    
T  12328010 cagttcgggcagaattgcagattttctc-aaaactcactcaatctcttggttctaacctcaaaactgattctaaacattgttctctgaatagtctaaggt 12327912  T
Q  247 ctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctcaa 325  Q
    ||| | ||||||||||||||||| |||| | ||  |  |||||||| |||||||||||| |||||||||||| ||||||    
T  12327911 ctggatactatttctacatcaatctaaccgattattcatcttaattcatcaattctccatcttttaacctaattctcaa 12327833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 136 - 274
Target Start/End: Original strand, 51336271 - 51336410
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatg 233  Q
    |||||||||||||  ||||||||| ||| |||||||||||| ||||||||| |||   | |||||||||||| |||||| ||||||| | ||||||||||    
T  51336271 gagcgatgaatgttggctcgggcataattgcagattttctc-aaaactcactcaatctcttggttctaacctcaaaactgattctaaacattgttctatg 51336369  T
Q  234 aatagtctaaggtctgaacactatttctacatcaatttaac 274  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  51336370 aatagtctaaggtctggacactatttctacatcaatctaac 51336410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 24088056 - 24088141
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||  |||||||| ||||| ||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||    
T  24088056 gagcgatgaatatcagtacgggcagattgcagtttttctcaaaaattcacccaaacccattgttttaaccttaaaactaattctaa 24088141  T

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Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 13302742 - 13302816
Alignment:
Q  202 aaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaaca 275  Q
    |||||||| ||| ||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  13302742 aaccttaatactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaaca 13302816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 22124972 - 22125049
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  |||| ||   ||||||||||| |||||||||    
T  22124972 gagcgatgaatgtcagctcgggcagaatgcagattttcacgaaaatgcacctaatcacatggttctaagcttaaaact 22125049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 7320808 - 7320734
Alignment:
Q  202 aaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaaca 275  Q
    |||| ||||||| ||||||| | |||| ||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  7320808 aaccctaaaactgattctaatcattgtactatgaataatctaaggtctgaacactgtttctacatcaattcaaca 7320734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 45495632 - 45495550
Alignment:
Q  139 cgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||| ||||  |||||||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  45495632 cgatgaatatcagtacgggcagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 45495550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 47191214 - 47191268
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgc 108  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||||| |||||    
T  47191214 actcgcgaggcgaagggaattgctcgcgaggtgagcgatgaagttcatcactcgc 47191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 52940305 - 52940220
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  ||  ||| || ||||||||||| ||||||||| |||||||    
T  52940305 gagcgatgaatgtcagctcgggcagaatgcagattttcacgaaaatgca-tcaattcacatggttctaagcttaaaactgattctaa 52940220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 45307931 - 45308016
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  |||||||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  45307931 gagcgatgaataacagtacgggcagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 45308016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 28204032 - 28203956
Alignment:
Q  137 agcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    ||||||||||||| |  |||||||| ||||| |||| || |||||||||||||  |||| |||||||||||||||||    
T  28204032 agcgatgaatgtctgtacgggcagattgcagtttttttcaaaaactcacccaatcccattgttctaaccttaaaact 28203956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 37359109 - 37359194
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  ||| |||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  37359109 gagcgatgaataacagtacggccagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 37359194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 14431800 - 14431748
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  14431800 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 14431748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 20631990 - 20632042
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  20631990 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 20632042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 36182249 - 36182301
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  36182249 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 36182301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 221
Target Start/End: Original strand, 20958718 - 20958887
Alignment:
Q  52 tcactcgcgaggcg-aggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtca 150  Q
    |||||||||||||| |||| |||| ||| | ||| |||| ||||| |||||| ||||| |||||||   |||| ||||| |  | |||||||||||||||    
T  20958718 tcactcgcgaggcgaagggaaattgctcacgaggagagcaatgaacttcatcactcgcgaggcgaggaaagctgctcgtgagggcgagcgatgaatgtca 20958817  T
Q  151 gctcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
     ||| |||||||||||| ||||| | ||||  ||  |||||| |||| |||||| ||||||||| |||||||    
T  20958818 actc-ggcagaatgcagtttttcacgaaaatgca-tcaaatcacatgattctaagcttaaaactgattctaa 20958887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 24782675 - 24782548
Alignment:
Q  54 actcgcgaggcgaggggaatta-ctcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagc 152  Q
    |||||| |||||||||| |||  |||||  || |||||||||| |||||| ||||| ||||||| |    | |||| ||| | |||||||||||||  ||    
T  24782675 actcgcaaggcgaggggtattggctcgcgtggcgagcgatgaacttcatcactcgcgaggcgaggttcattgctcgctatggcgagcgatgaatgtaggc 24782576  T
Q  153 tcgggcagaatgcagattttctccaaaa 180  Q
    ||||||||||||||| ||||||| ||||    
T  24782575 tcgggcagaatgcagtttttctcaaaaa 24782548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 16093298 - 16093261
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttc 173  Q
    |||||||||||||  |||||||||||||||||||||||    
T  16093298 gagcgatgaatgttggctcgggcagaatgcagattttc 16093261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 47191275 - 47191360
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||||||||||||||| |||||||  | ||||  |||| ||   |||||||| || ||||||||| |||||||    
T  47191275 gagcgatgaatctcagctcgggcagaatgtagatttttacgaaaatccacctaaccacatggttcaaagcttaaaactgattctaa 47191360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 20580138 - 20580190
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| ||||  |||||||  |||||||||||||||||||||| |||||||    
T  20580138 ttttctcaaaaatccacccaatcccatggttctaaccttaaaactgattctaa 20580190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22899700 - 22899648
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||| ||||||||||| |||||||    
T  22899700 ttttctcaaaaattcacccaaacccattgttctcaccttaaaactgattctaa 22899648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 54 - 336
Target Start/End: Original strand, 4074 - 4358
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagct 153  Q
    |||| ||||||||||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||| | ||| ||||||||||||||    
T  4074 actcacgaggcgaggggatttactcgcaaggcgagcgatgaatttcatccctcgcgaggcgagatcagctactcgctatggcgagtgatgaatgtcagct 4173  T
Q  154 cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa-ccttgttctatgaatagtctaaggtctgaac 252  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||| |||||||| ||||||| | ||||| |||||||||||||||||||| ||    
T  4174 cgggcagaatgcagattttctcaaaaactcatccaattccatggttctaacattaaaactgattctaatcattgttttatgaatagtctaaggtctggac 4273  T
Q  253 actatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctc-aatcctcaaaact 336  Q
    | || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  4274 attaattctacatcaatttaacaggttcatactcttaattgatcaattctccaacttttaacctaattctcaaatcctcaaaact 4358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 29044 - 29349
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||||||||||| ||||| | |||| ||||||||||||   |||||||||||| ||| ||||||||||||||||| ||||  || ||||||    
T  29044 cgattcactcgcaatggcgagcgacatatgggcttactcgcgaggcggacggaattactcgcgaggcgagcgatgaagttcatcactcgtgagacgagat 29143  T
Q  119 cagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    |||||| ||| ||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  29144 cagctattcgctaaggcgagcgatgaatgtcagctcgggcagaatgcagattttctcaaaaactcacccaattccatggttctaaccttaaaactgattc 29243  T
Q  219 taa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | |||||||||||  ||||||||||||  ||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||    
T  29244 taatcattgttctatga--agtctaaggtctagacattatttctacatcaattcaacatgttcctactcttaattaatcaattctccaacttttaactta 29341  T
Q  318 actctcaa 325  Q
    | ||||||    
T  29342 attctcaa 29349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 6e-90; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 20 - 318
Target Start/End: Complemental strand, 10659248 - 10658949
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatc 119  Q
    ||||||||||| |||||||   |||  |||| |||||||||||||||||||  |||||||||||| |||| ||| |||||||||||||| |||||||       
T  10659248 gattcactcgctatggcgatcaacaattagggtcactcgcgaggcgaggggttttactcgcaaggcgagcaatgcagttcatccctcgcgaggcgagggt 10659149  T
Q  120 agctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattct 219  Q
    ||||||||| ||| | |||||||||||||||| |||||||||||||| |||||||| |||||||| |||| |||||||||| |||||||||||||||| |    
T  10659148 agctactcgctatggcgagcgatgaatgtcagttcgggcagaatgcatattttctcaaaaactcatccaattccatggttcaaaccttaaaactaattat 10659049  T
Q  220 -aaccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaa 318  Q
     | | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  10659048 gatcattgttctatgaatagtctaaggtctgaacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaa 10658949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 104 - 336
Target Start/End: Original strand, 15288843 - 15289078
Alignment:
Q  104 ctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaa 203  Q
    ||||| |||||||||||  |||||| ||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  15288843 ctcgcgaggcgagatcaattactcgctatggtgagcgatgaatgtcagctcaggcagaatgcagtttttctcaaaaactcacccaattccatggttctaa 15288942  T
Q  204 ccttaaaactaattctaa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattct 302  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15288943 ccttaaaactgattctaatcattgttctatgaatattctaaggtctggacactatttctacatcaattcaacaggttcctactcttaattaatcaattct 15289042  T
Q  303 ccaactttt-aacctaactctc-aatcctcaaaact 336  Q
    ||||||||| ||||||| |||| |||||||||||||    
T  15289043 ccaacttttaaacctaattctcaaatcctcaaaact 15289078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 52 - 325
Target Start/End: Complemental strand, 36704937 - 36704662
Alignment:
Q  52 tcactcgcgaggcgaggggaat-tactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtca 150  Q
    |||||||||||||||||||  | ||||| | ||| ||||||||||||||||||||||| ||||||||||  || |||| | | | |||||||||||||||    
T  36704937 tcactcgcgaggcgaggggtttctactctctaggcgagcgatgaagttcatccctcgcgaggcgagatcgtctgctcgctgtggcgagcgatgaatgtca 36704838  T
Q  151 gctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtct 248  Q
    ||||||||||||| |||||||||||| |||||||| |||| || |||||||||||||||||||| || |||| | |||||||||||| ||||||||||||    
T  36704837 gctcgggcagaattgcagattttctc-aaaactcatccaattcaatggttctaaccttaaaactgatcctaatcattgttctatgaaaagtctaaggtct 36704739  T
Q  249 gaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctcaa 325  Q
    | |||||| ||||||| |||||||||||||| |||||||||||| ||||||  ||||||||||| ||||| ||||||    
T  36704738 ggacactaattctacaacaatttaacaggtttctactcttaattgatcaatcttccaacttttatcctaattctcaa 36704662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 54 - 325
Target Start/End: Original strand, 4071506 - 4071781
Alignment:
Q  54 actcgcgaggcgagg-ggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagc 152  Q
    ||||||||||||||  |||||| ||| | ||| || |||||||| | ||| ||||| |||||||  |||||||||| ||| | |||||||||||||||||    
T  4071506 actcgcgaggcgagaaggaattgctcactaggcgaacgatgaagatgatcactcgcgaggcgaggacagctactcgctatggcgagcgatgaatgtcagc 4071605  T
Q  153 tc---gggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtct 248  Q
    ||   ||||||| ||||| |||| || |||||||||| || |||||| |||||||||||||| | |||| || | |||||||||||||| ||||||||||    
T  4071606 tctacgggcagagtgcagttttt-tcaaaaactcacctaattccatgattctaaccttaaaattgattccaatcattgttctatgaataatctaaggtct 4071704  T
Q  249 gaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaactt-ttaacctaactctcaa 325  Q
    | |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| | ||||||| ||||||    
T  4071705 ggacactatttctacatcaattcaacagattcctactcttaattaatcaatt-tccaacttctaaacctaattctcaa 4071781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 309
Target Start/End: Complemental strand, 14219291 - 14219003
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaa-ggtgagcgatgaagttcatccctcgcaaggcgagatcagct 123  Q
    ||||||||||| ||| |||| || || | |||| ||||||||| |||||||||||| | || |||| |||||| | ||| | ||  ||| |||| ||| |    
T  14219291 actcgcaatggtgagcgacaactgggtttactcccgaggcgagaggaattactcgctatggcgagcaatgaagattatcacccgtgaggtgagagcagtt 14219192  T
Q  124 actcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattcta 220  Q
    ||||| ||| | |||||||||||||||||||   |||||||||| || ||||| | |||| ||||| || |||||   ||||||||||||||| ||||||    
T  14219191 actcgctatggcgagcgatgaatgtcagctctacgggcagaatgaag-ttttcccaaaaattcacctaattccataactctaaccttaaaactgattcta 14219093  T
Q  221 acc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactctt-aattaatcaattctccaactt 309  Q
    | | |||||||||||||| ||||||||||| |||||||||||||||||||| ||||| || |||||||| |||||||||||| ||||||||    
T  14219092 atcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagatttctactcttaaattaatcaatt-tccaactt 14219003  T

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Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 290
Target Start/End: Complemental strand, 48807640 - 48807451
Alignment:
Q  104 ctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaactcacccaaatccatggttc 200  Q
    ||||| |||||||  ||| |||||| ||| | |||||||||||||||| ||   ||||||||||||| |||||  ||||||||||| || |||||   ||    
T  48807640 ctcgcgaggcgaggacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaaaactcacctaattccataactc 48807542  T
Q  201 taaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaa 290  Q
    ||||||||||||| ||||||| | ||||||||||||||  |||||||||| | |||||||||||||||||| ||||| || ||||||||||    
T  48807541 taaccttaaaactgattctaatcattgttctatgaataacctaaggtctggatactatttctacatcaattcaacagatttctactcttaa 48807451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 15202951 - 15203092
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaac-cttgttctatga 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||| |||||||||||||||| |||| |||  |  | |||||     
T  15202951 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaaatcacccaatctcatgtttctaaccttaaaactgattccaactatcatcctatgg 15203050  T
Q  235 atagtctaaggtctgaacactatttctacatcaatttaacag 276  Q
    ||  ||||||||||| ||||  |||||||||||||| |||||    
T  15203051 attatctaaggtctgtacacagtttctacatcaattcaacag 15203092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 104 - 290
Target Start/End: Original strand, 16078070 - 16078258
Alignment:
Q  104 ctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaactcacccaaatccatggttc 200  Q
    ||||| |||||||| ||  |||||| ||| | ||||||||||||| || ||   ||||||||||||   ||||  ||||||||||| || |||||  | |    
T  16078070 ctcgcgaggcgagaacatatactcgctatggcgagcgatgaatgttagttctacgggcagaatgcaa--tttcaacaaaactcacctaattccataatcc 16078167  T
Q  201 taaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaa 290  Q
    ||||||||||||| ||||||| | ||||||||||||||  |||||||||||||||||||||| |||||||| ||||| || ||||||||||    
T  16078168 taaccttaaaactgattctaatcattgttctatgaataacctaaggtctgaacactatttctgcatcaattcaacagatttctactcttaa 16078258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 18074849 - 18074714
Alignment:
Q  202 aaccttaaaactaattctaacctt-gttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaatt 300  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||| | | |||||||||||||||||||||| | ||  |  ||| ||||||||||||    
T  18074849 aaccttaaaactaattctaaactttgttctacgaatagtctaaggtcaggatactatttctacatcaatttaaccgtttagtcttctcaattaatcaatt 18074750  T
Q  301 ctccaacttttaacctaactctcaa-tcctcaaaact 336  Q
    |||||| ||||||||||  |||||| |||||||||||    
T  18074749 ctccaa-ttttaacctagttctcaactcctcaaaact 18074714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 290
Target Start/End: Complemental strand, 13132635 - 13132446
Alignment:
Q  104 ctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaactcacccaaatccatggttc 200  Q
    ||||| |||||||| ||| |||||| ||| | |||||| ||||||||||||   ||||||||||||| ||||| | |||||||||| || || |    ||    
T  13132635 ctcgcgaggcgagaacagttactcgctatggcgagcgacgaatgtcagctctacgggcagaatgcag-ttttcacaaaaactcacctaattctacaactc 13132537  T
Q  201 taaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaa 290  Q
    ||||||||||||| ||||||| | |||||| ||||||| |||| ||| || ||||| |||||||||||||| ||||| || ||||||||||    
T  13132536 taaccttaaaactgattctaatcattgttcaatgaataatctacggtatggacactgtttctacatcaattcaacagatttctactcttaa 13132446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 212
Target Start/End: Complemental strand, 9725163 - 9725005
Alignment:
Q  55 ctcgcgaggcgagggg-aattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagct 153  Q
    |||||||||||||||  |||| ||||| ||| |||||||||  |||||| ||||| |||||| |   ||| |||| ||| | ||||||||||||||||||    
T  9725163 ctcgcgaggcgagggacaattgctcgcgaggcgagcgatgatcttcatcactcgcgaggcgaaaggtgctgctcgctatggcgagcgatgaatgtcagct 9725064  T
Q  154 cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaac 212  Q
    ||||||||||||| ||||||||| ||| ||| ||||   |||| |||||| ||||||||    
T  9725063 cgggcagaatgcaaattttctcctaaaatcatccaatctcatgtttctaaacttaaaac 9725005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 309
Target Start/End: Complemental strand, 35771660 - 35771549
Alignment:
Q  199 tctaaccttaaaactaattctaacctt-gttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactctt-aattaatc 296  Q
    ||||||||||||||| |||||||  || |||||||||||| | ||||||| | ||||||||||||| |||||| ||||  ||||||||||| ||||||||    
T  35771660 tctaaccttaaaactgattctaatgtttgttctatgaataatttaaggtcaggacactatttctacgtcaattcaacatattcctactcttaaattaatc 35771561  T
Q  297 aattctccaactt 309  Q
    |||| ||||||||    
T  35771560 aatt-tccaactt 35771549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 42462562 - 42462730
Alignment:
Q  54 actcgcgaggcgaggggaatta-ctcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagc 152  Q
    |||||||||||| |||| |||  ||||| ||| |||||||||| |||||||||||| |||| |||   ||| |||  |   | |||||||||||||||||    
T  42462562 actcgcgaggcgggggggatttgctcgctaggcgagcgatgaacttcatccctcgcgaggcaagacttgctgctcactgaggcgagcgatgaatgtcagc 42462661  T
Q  153 tcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||||| ||||| | ||||  ||  |||||| ||||||||||| ||||||||| |||||||    
T  42462662 tcgggcagaatgcagtttttcacgaaaatgca-tcaaatcacatggttctaagcttaaaactgattctaa 42462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 16996864 - 16996951
Alignment:
Q  134 gtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||  || | |||  ||||||| ||| ||||||||| |||||||    
T  16996864 gtgagcgatgaatgtcagctcgggcagaatgcagatttttacgaaaatccatcaaaacacatggttttaagcttaaaactgattctaa 16996951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 4994127 - 4994212
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||  |||  |||||||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  4994127 gagcgatgaataacagtacgggcagattacagtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 4994212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 15095851 - 15095762
Alignment:
Q  202 aaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaa 290  Q
    |||| ||||||| ||||||| | |||| ||||||||| || |||||||||||||| |||||||||||||| ||||| || ||||| ||||    
T  15095851 aaccctaaaactgattctaatcattgtactatgaataatcaaaggtctgaacactgtttctacatcaattcaacagatttctactattaa 15095762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 13849184 - 13849100
Alignment:
Q  137 agcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||| ||||  |||||||| ||||| ||| ||| |||| ||||||||  |||||||||||||||||||| | |||||||    
T  13849184 agcgatgaatatcagtacgggcagattgcagttttcctcaaaaattcacccaatcccatggttctaaccttaaaattgattctaa 13849100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 21742734 - 21742682
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  21742734 ttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 21742682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 218
Target Start/End: Complemental strand, 17059910 - 17059767
Alignment:
Q  75 actcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttct 174  Q
    |||||| ||| |||||||||  |||||| ||||| |||||| |   ||| |||| ||| | ||||||||||||| |||||||||||| ||||||||||      
T  17059910 actcgcgaggcgagcgatgatcttcatcactcgcgaggcgaaaggtgctgctcgctatggcgagcgatgaatgttagctcgggcagattgcagattttta 17059811  T
Q  175 ccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    | ||||  |||| |||  |||||||  |||||||||||| ||||    
T  17059810 cgaaaatccacctaaacacatggtttaaaccttaaaactgattc 17059767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 9032793 - 9032708
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||||||||||| ||| ||||| ||||| | |||| ||| | ||   ||||||||||| ||||||||| |||||||    
T  9032793 gagcgatgaatgtcagctcgggtagattgcagtttttcacgaaaattcatctaatcacatggttctaagcttaaaactgattctaa 9032708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 16574018 - 16574103
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||   ||||||| ||||| ||| ||  |||| ||||||||  |||||||||||||||||||||| |||||||    
T  16574018 gagcgatgaatatcagtaagggcagattgcagttttcctaaaaaattcacccaatcccatggttctaaccttaaaactgattctaa 16574103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 16591644 - 16591559
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||   ||||||| ||||| ||| ||  |||| ||||||||  |||||||||||||||||||||| |||||||    
T  16591644 gagcgatgaatatcagtaagggcagattgcagttttcctaaaaaattcacccaatcccatggttctaaccttaaaactgattctaa 16591559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 16929535 - 16929450
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||  ||| |||| | | | ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  16929535 gagcgatgaatatcagtacggccagattacggtttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 16929450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 21064692 - 21064607
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||   ||||||| ||||| ||||||| |||| ||||||||  ||||||||||||||  |||||| |||||||    
T  21064692 gagcgatgaatatcagtaagggcagattgcagtttttctcaaaaattcacccaatcccatggttctaaccccaaaactgattctaa 21064607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 35366865 - 35366950
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||  |||||||| ||||| ||||||| |||| ||||||||  |||| |||||||||  |||||| |||||||    
T  35366865 gagcgatgaatatcagtacgggcagattgcagtttttctcaaaaattcacccaatcccatagttctaaccccaaaactgattctaa 35366950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 123638 - 123586
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  123638 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 123586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 8777021 - 8777073
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  8777021 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 8777073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 13394910 - 13394858
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  13394910 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 13394858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 16007091 - 16007143
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  16007091 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 16007143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 48785987 - 48786039
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  48785987 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 48786039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 15140025 - 15140140
Alignment:
Q  176 caaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaac 274  Q
    ||||||||||| || |||||   ||||||| ||||||| |||||||   |||| ||| ||||| ||||||||||||||| | ||||||||||| || |||    
T  15140025 caaaactcacctaattccataactctaaccctaaaactgattctaattattgtactaagaataatctaaggtctgaacagtgtttctacatcagttcaac 15140124  T
Q  275 aggttcctactcttaa 290  Q
    || || ||||| ||||    
T  15140125 agatttctactattaa 15140140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 8135423 - 8135377
Alignment:
Q  229 ctatgaatagtctaaggtctgaacactatttctacatcaatttaaca 275  Q
    ||||||||| |||| ||||||||||||| ||||||||||||| ||||    
T  8135423 ctatgaataatctagggtctgaacactaattctacatcaattcaaca 8135377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 11768449 - 11768387
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    |||||||||||||  || ||| ||||| ||| ||||||||||||||||| ||||| |||||||    
T  11768449 actcgcgaggcgaaagggattgctcgcgaggcgagcgatgaagttcatcactcgcgaggcgag 11768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 13893219 - 13893304
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| | |||||||||| ||| ||||||||||   |||| |||| |||  |||||||||||||||||||||| |||||||    
T  13893219 gagcgatgaatcttagctcgggcaaaatcgcagattttcataaaaa-tcactcaatcccatggttctaaccttaaaactgattctaa 13893304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 15623884 - 15623930
Alignment:
Q  229 ctatgaatagtctaaggtctgaacactatttctacatcaatttaaca 275  Q
    ||||||||| ||||||||||||| |||| ||||||||||||| ||||    
T  15623884 ctatgaataatctaaggtctgaagactaattctacatcaattcaaca 15623930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 7536717 - 7536781
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||| |||||   |||||  || ||||||||||||||||| ||||| |||||||||    
T  7536717 actcgcgaggcgaagggaagggctcgcgtggcgagcgatgaagttcatcactcgcgaggcgagat 7536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 4599 - 4913
Alignment:
Q  23 tcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagc 122  Q
    |||||||  ||||||||  ||| ||||| |||||||||||||||||||  ||||||||| || ||||||||||||||||||||||| ||||||||||||     
T  4599 tcactcgttatggcgagcaacaactagggtcactcgcgaggcgaggggttttactcgcatggcgagcgatgaagttcatccctcgcgaggcgagatcagt 4698  T
Q  123 tactcgttatagtgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||| ||| | |||||||||||||||||||||||| || |||| ||||||| ||||||||| |||| || |||||||||||||||||||| |||||||    
T  4699 tactcgctatggcgagcgatgaatgtcagctcgggcataattgcatattttct-caaaactcatccaattcaatggttctaaccttaaaactgattctaa 4797  T
Q  222 -ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaact 320  Q
     | |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||| ||| ||| ||| ||||||||||||| |    
T  4798 tcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacaggtttctcctcttaattgatcgattatcc-acttttaacctaatt 4896  T
Q  321 c-tcaatcctcaaaact 336  Q
    | | |||||||||||||    
T  4897 cttaaatcctcaaaact 4913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 151; Significance: 8e-80; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 54 - 318
Target Start/End: Original strand, 5638 - 5904
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagct 153  Q
    |||||||||||||||||  |||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||| ||| | ||||||| ||||||| ||    
T  5638 actcgcgaggcgaggggttttactcgctaggcgagcgatgaagttcatccctcgcgaggcgagatcagttactcgctatggcgagcgattaatgtcaact 5737  T
Q  154 cgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaa 251  Q
    |||||||||| |||||||||   ||||||||| |||| || |||||||||||||||||||| ||||||| | ||| | |||||||||||||||||||| |    
T  5738 cgggcagaattgcagatttttctcaaaactcatccaattcaatggttctaaccttaaaactgattctaatcattgctatatgaatagtctaaggtctgga 5837  T
Q  252 cactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaa 318  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  5838 cactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaa 5904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 55171 - 55005
Alignment:
Q  55 ctcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctc 154  Q
    |||||||||||| ||||| | ||||| ||| |||||||||| |||||||||||| ||||||||  |||| ||||  |  |||||||||||||||||||||    
T  55171 ctcgcgaggcgaagggaaatgctcgcgaggcgagcgatgaacttcatccctcgcgaggcgagacaagctgctcgcgagggtgagcgatgaatgtcagctc 55072  T
Q  155 gggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||||||||  | |||| ||| | |||  ||||||||||| ||||||||| |||||||    
T  55071 gggcagaatgcagatttttacgaaaattcatcaaaacacatggttctaagcttaaaactgattctaa 55005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 20 - 318
Target Start/End: Complemental strand, 24550563 - 24550265
Alignment:
Q  20 gattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatc 119  Q
    |||||||||||||||||||| ||||   ||  |||||||||||||||||||  |||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  24550563 gattcactcgcaatggcgagcgacaaaaagt-tcactcgcgaggcgaggggttttactcacaaggcgagcgatgaagttcatcactcgcgaggcgagatc 24550465  T
Q  120 agctactcgttatagtgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    | || |||| ||| | |||||||||||| |||||||||||||| ||||||||||||| |||||||| |||| || |||||||||||||||||||| ||||    
T  24550464 atctgctcgctatggcgagcgatgaatgacagctcgggcagaagtgcagattttctc-aaaactcatccaattcaatggttctaaccttaaaactgattc 24550366  T
Q  219 taacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaaccta 317  Q
    ||| | |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||  ||||| ||||| | ||||||||||||||||||||||    
T  24550365 taatcattgttctatgaatagtctaaggtcttgacactatttttacatcaatttaacaggtttatactcctaattgaccaattctccaacttttaaccta 24550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 25 - 325
Target Start/End: Complemental strand, 31732297 - 31731995
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||| |||||||| | || || || ||||||||| ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||| ||||||    
T  31732297 actcgctatggcgagcggcaactgggttcactcgcggggcgaggggaattactcgcaaggcgagcgatgaggatcatcactcgcgaggcgagagcagcta 31732198  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctcc-aaaactcacccaaatccatggttctaaccttaaaactaattctaa-c 222  Q
    |||| ||| | |||||||||||||||||||||||||||||||| ||||| || |||||||||| || ||||    ||||||| ||||||| || |||| |    
T  31732197 ctcgctatggcgagcgatgaatgtcagctcgggcagaatgcag-ttttcaccaaaaactcacctaattccacaactctaaccataaaactgatactaatc 31732099  T
Q  223 cttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaactttt-aacctaactc 321  Q
     |||||||||||||  ||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| |||||||||| ||||||| ||    
T  31732098 attgttctatgaatgatctaaggtctggacactatttctacatcaattcaacatattcctactcttaattaatcaattttccaacttttaaacctaattc 31731999  T
Q  322 tcaa 325  Q
    ||||    
T  31731998 tcaa 31731995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 218
Target Start/End: Complemental strand, 22376163 - 22375997
Alignment:
Q  52 tcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcag 151  Q
    ||||||||||||||| |||  || ||||| ||| |||||||||| |||||| ||||| ||||||||  | || || |||   | | ||||||||||||||    
T  22376163 tcactcgcgaggcgaagggttttgctcgctaggcgagcgatgaacttcatcactcgcgaggcgagactaactgcttgttggggcgcgcgatgaatgtcag 22376064  T
Q  152 ctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||||||||||||||||||||||| ||| ||| ||||   |||  |||||||||||||||| ||||    
T  22376063 ctcgggcagaatgcagattttctcctaaaatcatccaatctcatttttctaaccttaaaactgattc 22375997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 270
Target Start/End: Original strand, 23501391 - 23501578
Alignment:
Q  86 gagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaact 182  Q
    ||||||||||| ||||| ||||| ||||||||   | | |||  ||| | |||||||||||||||| ||   ||||||||| || ||||||  ||||| |    
T  23501391 gagcgatgaagatcatcgctcgcgaggcgagaagtgttgctcactatggcgagcgatgaatgtcagttctacgggcagaataca-attttcagcaaaatt 23501489  T
Q  183 cacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatt 270  Q
    |||| || ||||||  ||||||||||||||| ||||||| | ||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  23501490 cacctaattccatgactctaaccttaaaactgattctaatcattgttatatgaataatctaaggtctggacactatttctacatcaatt 23501578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 25738990 - 25739179
Alignment:
Q  33 tggcgagtgacatctaggctcactcgcgaggcgagggga-attactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgtta 131  Q
    |||||||  |||||| || |||||||||||||||||| | | | ||||| | | ||||||||||||||||||||||| |||||||    | | ||||  |    
T  25738990 tggcgagcaacatctgggttcactcgcgaggcgagggaagactgctcgcgaagcgagcgatgaagttcatccctcgcgaggcgaggcttgatgctcgcga 25739089  T
Q  132 tagtgagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
      ||||||||||||| |||||||||||||||| ||||||||||   |||| |||| |||  ||| |||||||||||||||||| |||||||    
T  25739090 gggtgagcgatgaatttcagctcgggcagaatcgcagattttc-ataaaaatcactcaatcccaaggttctaaccttaaaactgattctaa 25739179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 9621906 - 9621736
Alignment:
Q  52 tcactcgcgaggcgaggggaatta-ctcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtca 150  Q
    |||||||||||||||| | || || ||||| | | || |||||||| ||||||||||| |||||||    ||| ||||  |  ||||||||||||| |||    
T  9621906 tcactcgcgaggcgagagaaaatagctcgcgaagcgaacgatgaagatcatccctcgcgaggcgaggcttgctgctcgcgagggtgagcgatgaatctca 9621807  T
Q  151 gctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||  ||||||||||   |||| ||||||||  ||||||||||| |||||||||| |||||||    
T  9621806 gctcgggcagaaacgcagattttcataaaaa-tcacccaatcccatggttctatccttaaaactgattctaa 9621736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 23620502 - 23620417
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||| |  |||||||| ||||| ||||||| |||| ||||||||   ||| ||||||||||||||||| |||||||    
T  23620502 gagcgatgaatgtctgtacgggcagattgcagtttttctcaaaaattcacccaatctcattgttctaaccttaaaactgattctaa 23620417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 20137282 - 20137345
Alignment:
Q  54 actcgcgaggcgagg-ggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||||| |||||| ||||| ||| |||||||||| |||||||||||| |||||||    
T  20137282 actcgcgaggcgaggcggaattgctcgctaggcgagcgatgaacttcatccctcgcgaggcgag 20137345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 22195587 - 22195524
Alignment:
Q  54 actcgcgaggcgagg-ggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||||| |||||| ||||| ||| |||||||||| |||||||||||| |||||||    
T  22195587 actcgcgaggcgaggcggaattgctcgctaggcgagcgatgaacttcatccctcgcgaggcgag 22195524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 15539919 - 15540004
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||| ||||  ||| |||| | ||| ||||||| |||  ||||||||| |||| ||||||||||||||||| |||||||    
T  15539919 gagcgatgaatatcagtacggacagattacagtttttctcaaaatttcacccaaacccattgttctaaccttaaaactgattctaa 15540004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 18453902 - 18453986
Alignment:
Q  137 agcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
    |||||||||| |||||||||||||||||||| ||||| | ||||  ||  |||||| ||||||||||| ||||||||| |||||||    
T  18453902 agcgatgaatttcagctcgggcagaatgcagtttttcacaaaaatgca-tcaaatcacatggttctaagcttaaaactgattctaa 18453986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 20137348 - 20137425
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    ||||||||||||| ||||||||||||||||| |||||| | ||||  |||| ||    ||||||||||||||||||||    
T  20137348 gagcgatgaatgttagctcgggcagaatgcaaattttcacgaaaatgcacctaatcatatggttctaaccttaaaact 20137425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 20177856 - 20177901
Alignment:
Q  224 ttgttctatgaatagtctaaggtctgaacactatttctacatcaat 269  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||    
T  20177856 ttgtactatgaataatctaaggtctgaacactgtttctacatcaat 20177901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 22158135 - 22158090
Alignment:
Q  224 ttgttctatgaatagtctaaggtctgaacactatttctacatcaat 269  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||    
T  22158135 ttgtactatgaataatctaaggtctgaacactgtttctacatcaat 22158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 22195521 - 22195444
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    ||||||||||||| ||||||||||||||||| |||||| | ||||  |||| ||    ||||||||||||||||||||    
T  22195521 gagcgatgaatgttagctcgggcagaatgcaaattttcacgaaaatgcacctaatcatatggttctaaccttaaaact 22195444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 8523604 - 8523656
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  8523604 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 8523656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 16103017 - 16103069
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  16103017 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 16103069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 16245961 - 16246025
Alignment:
Q  52 tcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||||| |||  || ||||| ||| |||||||||| |||||||||||| |||||||    
T  16245961 tcactcgcgaggcgaagggttttgctcgccaggcgagcgatgaacttcatccctcgcgaggcgag 16246025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 20224658 - 20224694
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||| |||||||||||||||||||||||||    
T  20224658 gagcgatgaatctcagctcgggcagaatgcagatttt 20224694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 22118642 - 22118678
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22118642 gagcgatgaatctcagctcgggcagaatgcagatttt 22118678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 16830435 - 16830522
Alignment:
Q  134 gtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||| ||||  |||||||| | ||| ||||||| || | ||||||||| || | |||||||| |||||||| |||||||    
T  16830435 gtgagcgatgaatatcagtacgggcagattacagtttttctcaaatattcacccaaaccctttgttctaactttaaaactgattctaa 16830522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 23527579 - 23527497
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||||||||| |||||||| ||||||| |||||||||| | |||| ||||| ||   ||||||||||||||||||||| ||||    
T  23527579 gagcgatgaatttcagctcgcgcagaattgcagattttcacaaaaa-tcacctaatcacatggttctaaccttaaaactgattc 23527497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 23077336 - 23077378
Alignment:
Q  26 ctcgcaatggcgagtgacatctaggctcactcgcgaggcgagg 68  Q
    ||||||||||||||||| |||| |||||||||| |||||||||    
T  23077336 ctcgcaatggcgagtgaaatctgggctcactcgtgaggcgagg 23077378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 15685540 - 15685496
Alignment:
Q  177 aaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  15685540 aaaattcacccaaacccattgttctaaccttaaaactgattctaa 15685496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 22059224 - 22059180
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    |||||||||||||  ||||||||||||||||| ||||||| ||||    
T  22059224 gagcgatgaatgtaggctcgggcagaatgcagtttttctcaaaaa 22059180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 29493427 - 29493479
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||| ||||| |||||||    
T  29493427 ttttctcaaaaattcacccaaacccattgttctaacctttaaactgattctaa 29493479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 75 - 325
Target Start/End: Original strand, 19660 - 19916
Alignment:
Q  75 actcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttct 174  Q
    |||||||||| ||||||||||||||||| || |||||||| ||||||||||||| ||  | |||||||||||||||||||||||||||||||  |||| |    
T  19660 actcgcaaggcgagcgatgaagttcatcactagcaaggcgggatcagctactcgctacggcgagcgatgaatgtcagctcgggcagaatgcaatttttat 19759  T
Q  175 ccaaaactcacccaaatccatggttctaaccttaaaactaattctaa-ccttgttctatgaatagtc-----taaggtctgaacactatttctacatcaa 268  Q
    | |||||||||||||  |||||||||||||||||||||| ||||||| | |||||||| ||||||||     ||||||||| ||||||||||||||||||    
T  19760 caaaaactcacccaatcccatggttctaaccttaaaactgattctaatcattgttctacgaatagtctaaggtaaggtctggacactatttctacatcaa 19859  T
Q  269 tttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctcaa 325  Q
    || |||| |||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  19860 ttcaacaagttcctactcttaattaatcaattctccaactttaaccctaattctcaa 19916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 18142 - 18195
Alignment:
Q  27 tcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgc 80  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  18142 tcgctatggcgagcgacatctaggctcacttgcgaggcgaggggaattactcgc 18195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 135; Significance: 3e-70; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 25 - 336
Target Start/End: Complemental strand, 52936 - 52623
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||| ||||||||  |||  |||| |||||||||||||||||||  ||| |||| ||| ||||||||||| ||||||||||| ||||||  || |||     
T  52936 actcgctatggcgagcaacagttagggtcactcgcgaggcgaggggttttaatcgctaggcgagcgatgaagatcatccctcgcgaggcgatgtctgctg 52837  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc 223  Q
    || | | | | |||||||||||||||||||||||| ||| |||||||||||| |||||||| |||| || ||||||||||| |||||||| ||||||| |    
T  52836 cttgctgtggcgagcgatgaatgtcagctcgggcaaaattgcagattttctc-aaaactcatccaattcaatggttctaactttaaaactgattctaatc 52738  T
Q  224 -ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactct 322  Q
     |||||||||||||||||||||||||| |||||| || ||||||||||||||||||| ||||||| |||  ||||||||||||||||||||||||| |||    
T  52737 attgttctatgaatagtctaaggtctggacactaattttacatcaatttaacaggtttctactctaaatcgatcaattctccaacttttaacctaattct 52638  T
Q  323 c-aatcctcaaaact 336  Q
    | |||||||||||||    
T  52637 caaatcctcaaaact 52623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 55713 - 55788
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaa 211  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||||| | ||   ||| |||||||||||||||    
T  55713 gagcgatgaatgtcagctcgggcagaattgcagattttc-acaaaactcatctaatctcatagttctaaccttaaaa 55788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 136 - 336
Target Start/End: Original strand, 96170 - 96372
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaaccttg-ttctatga 234  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||| | || ||||||||    
T  96170 gagcgatgaatgtcagctcggacagaatgcagattttctcaaaaattcacccaatcccatggttctaaccttaaaactgattctaatcatggttctatga 96269  T
Q  235 atagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactct-caatcctcaaa 333  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  96270 atagtctaaggtctggacattatttctacatcaattcaacagattctcactcttaattaatcaattctccaacttttaacctaattctccaatcctcaaa 96369  T
Q  334 act 336  Q
    |||    
T  96370 act 96372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 104 - 336
Target Start/End: Original strand, 398301 - 398535
Alignment:
Q  104 ctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttcta 202  Q
    ||||| ||||||||  ||||||| | ||| | |||||||||||||||||||||||||||| |||||||||||| |||||||| |||| || |||  ||||    
T  398301 ctcgcgaggcgagacaagctacttgctatggcgagcgatgaatgtcagctcgggcagaattgcagattttctc-aaaactcatccaattcaatgactcta 398399  T
Q  203 accttaaaactaattctaacctt-gttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattc 301  Q
    ||||||||||| ||||||| | | ||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  398400 accttaaaactgattctaatcatcgttctatgaatagtctaaggtttggacactaattctacatcaatttaataggttcctactcttaattgatcaattc 398499  T
Q  302 tccaacttttaacctaactc-tcaatcctcaaaact 336  Q
    ||||||||||||||||| || | |||||||||||||    
T  398500 tccaacttttaacctaattcttaaatcctcaaaact 398535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 25 - 336
Target Start/End: Original strand, 60572 - 60868
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagct 123  Q
    |||||| |||||||| |||| ||||| ||||| |||||||||||| || |||||| ||||| ||||||||||||||||| ||||| |||||||  || ||    
T  60572 actcgctatggcgagcgacaactagggtcacttgcgaggcgagggaaaattactcacaaggcgagcgatgaagttcatcactcgcgaggcgaggacaact 60671  T
Q  124 actcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa-ctcacccaaatccatggttctaaccttaaaactaattctaac 222  Q
    ||||| ||  | ||||||||||||||||||||| |||||||||||||||||| |||| |||| |||| |||||                   |||||||     
T  60672 actcgctaaggcgagcgatgaatgtcagctcggacagaatgcagattttctcaaaaaactcatccaattccat-------------------attctaat 60752  T
Q  223 c-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactc 321  Q
    | ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  60753 cattgttctatgaatagtctaaggtctggtcactaattctacatcaatttaacaggttcctactcttaattaatcaattcaccaacttttaacctaattc 60852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 30799 - 30966
Alignment:
Q  55 ctcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagct 153  Q
    |||||||||||||||||| |||  ||||||| ||||||||||| ||||| ||||| | |||||| ||||||||||   | | |||| |||||||||||||    
T  30799 ctcgcgaggcgaggggaaattatgcgcaaggcgagcgatgaagatcatcactcgcgaagcgagaacagctactcgccgtggcgagcaatgaatgtcagct 30898  T
Q  154 cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    | |||||||||||| ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||    
T  30899 caggcagaatgcagtttttctcaaaaattcacccaattccatggttctaaccttaaaactgattctaa 30966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 290
Target Start/End: Original strand, 107948 - 108218
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaa-ggtgagcgatgaagttcatccctcgcaaggcgaga 117  Q
    ||||| |||||||||| ||||||||| || || | |||||||||||||| |||||||||||| | || ||||||||||| | ||| ||||| |||||| |    
T  107948 cgatttactcgcaatgacgagtgacagctgggtttactcgcgaggcgagaggaattactcgctatggcgagcgatgaagatgatcactcgcgaggcgaaa 108047  T
Q  118 tcagctactcgttatagtgagcgatgaatgtcagct---cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaacta 214  Q
     | | ||||||     | |||||||||||||||| |   |||||| ||||||| ||||| | |||||||||| || |||||   |||||||||||||||     
T  108048 actgttactcgc----gcgagcgatgaatgtcagttatacgggcataatgcag-ttttcccaaaaactcacctaattccataactctaaccttaaaactg 108142  T
Q  215 attctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaa 290  Q
    ||| ||| | |||||||||||||| ||||||||||| |||||||||||||||||||| ||||| || ||||||||||    
T  108143 attttaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagatt-ctactcttaa 108218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 25 - 325
Target Start/End: Original strand, 14934 - 15234
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||||||||||||  |  ||| |||| |||||||||||||||||  |||||||| ||| |||| ||||| |||||| ||||| ||||||   |   ||    
T  14934 actcgcaatggcgagcaagttctgggcttactcgcgaggcgagggggtttactcgctaggcgagcaatgaacttcatcactcgcgaggcgactactcata 15033  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaat-gcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc 223  Q
    ||||     | ||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||   | |||||| ||| | |||||| |||||||      
T  15034 ctcgcctgggcgagcgatgaatgtcagctcggacagaattgcagattttctc-aaaactcactcaatctcttggttccaacatcaaaactgattctaaga 15132  T
Q  224 -ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactct 322  Q
     |||||||||||||||||||||| ||| ||||||||||||||||||| |||| | ||  |  |||||||| |||||||||||| | |||||||||| |||    
T  15133 attgttctatgaatagtctaaggactggacactatttctacatcaatctaaccgattattcatcttaattcatcaattctccatc-tttaacctaattct 15231  T
Q  323 caa 325  Q
    |||    
T  15232 caa 15234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 270
Target Start/End: Original strand, 1797 - 1970
Alignment:
Q  98 tcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatgg 197  Q
    ||||||||||| || ||||| ||||| |||| |   | ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||  ||||||    
T  1797 tcatccctcgcgagccgagaccagctgctcgctgaggcgagcgatgactgtcagctcgggcagaatgcagattttctcaaaaattcacccaatcccatgg 1896  T
Q  198 ttctaaccttaaaactaattctaa-ccttgttctatgaatagtctaaggtctgaacactatttctacatcaatt 270  Q
    |||||||||||||||||||||||| | |    ||||||||  ||||||||||| ||||  ||||||||||||||    
T  1897 ttctaaccttaaaactaattctaatcatcaacctatgaatcatctaaggtctgtacacagtttctacatcaatt 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 136 - 279
Target Start/End: Complemental strand, 11041 - 10897
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa-ccttgttctatga 234  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||   ||||||||||||||||||||| ||||||| |    | ||| ||    
T  11041 gagcgatgaatgtcagctcgggcagaatgcagattttctcaaaaattcacccaatctcatggttctaaccttaaaactgattctaatcaccatcctagga 10942  T
Q  235 atagtctaaggtctgaacactatttctacatcaatttaacaggtt 279  Q
    ||  ||||||||||| |||| ||||||||||||||| ||||||||    
T  10941 attatctaaggtctgtacacaatttctacatcaattcaacaggtt 10897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 276
Target Start/End: Original strand, 3855 - 4080
Alignment:
Q  52 tcactcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcag 151  Q
    ||||||||||||||| |||  || ||||  ||| |||||||||| |||||| ||||| ||||||||  |||| |||| |   | ||||||||||||||||    
T  3855 tcactcgcgaggcgaagggttttgctcggtaggcgagcgatgaacttcatcactcgcgaggcgagactagctgctcgctggggcgagcgatgaatgtcag 3954  T
Q  152 ctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattct-aaccttgttctatgaatagtctaaggtctga 250  Q
    ||||||| || ||||| ||||||  |||  ||||||||  ||||||||||||||||| |||| ||||| ||| |  | ||||||||  |||||||| ||     
T  3955 ctcgggctgactgcagtttttctaaaaatttcacccaatcccatggttctaaccttagaactgattctaaacatcatcctatgaattatctaaggtttgt 4054  T
Q  251 acactatttctacatcaatttaacag 276  Q
    |||| ||||||||||||||| |||||    
T  4055 acacaatttctacatcaattcaacag 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 498720 - 498913
Alignment:
Q  26 ctcgcaatggcgagtgacatctaggctcactcgcgaggcgagggg-aattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagcta 124  Q
    |||||| |||||||  |||||  || |||||| |||||||||||| || ||||||| ||| ||||||||| ||||||| ||||  |||||||   ||||     
T  498720 ctcgcagtggcgagcaacatcagggttcactcacgaggcgagggggaactactcgctaggcgagcgatgatgttcatcactcgtgaggcgaggctagctg 498819  T
Q  125 ctcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||     | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||| ||||||| |||||||| ||||    
T  498820 ctcgccggggcgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaaatcacccaatctcatgtttctaactttaaaactgattc 498913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 162614 - 162417
Alignment:
Q  25 actcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaat-tactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagct 123  Q
    ||||||| |||||||  ||||||  | |||||||||| ||||||| ||  ||||||||| | ||||||||||||||||||||||| |||||||    |||    
T  162614 actcgcagtggcgagcaacatctgtgttcactcgcgatgcgagggaaaactactcgcaaagcgagcgatgaagttcatccctcgcgaggcgaggattgct 162515  T
Q  124 actcgttatagtgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
     ||||  |  | ||||||||||| ||||||| ||||||| |||| ||||||   |||| |||| |||  |||||||||||||||||||||| |||||||    
T  162514 gctcgcgagggcgagcgatgaatctcagctcaggcagaattgcatattttc-ataaaaatcactcaatcccatggttctaaccttaaaactgattctaa 162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 447187 - 447223
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||| |||||||||||||||||||||||||||||||    
T  447187 gagcggtgaatgtcagctcgggcagaatgcagatttt 447223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 172
Target Start/End: Original strand, 498098 - 498133
Alignment:
Q  137 agcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||| ||||||||||||||||||||||    
T  498098 agcgatgaatgtctgctcgggcagaatgcagatttt 498133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 109947 - 110110
Alignment:
Q  140 gatgaatgtcagctc---gggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaa 235  Q
    |||||||||||||||   ||||||||||||| ||||| | |||||||||| |  ||||     |||||||||||||| ||||||| | ||||||||||||    
T  109947 gatgaatgtcagctctacgggcagaatgcag-ttttcacaaaaactcacctatttccacaaccctaaccttaaaactgattctaatcattgttctatgaa 110045  T
Q  236 tagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaatt 300  Q
    ||  ||||||| || ||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  110046 taacctaaggtttggacattatttctacatcaattcaacagattcctactcttaattaatcaatt 110110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 204629 - 204542
Alignment:
Q  134 gtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||||||||||||||  |||||||| ||||| ||||||| |||| ||||||||| |||||||||||||||||||||| |||||||    
T  204629 gtgagcgatgaatgtcagtacgggcagattgcagtttttctcaaaaattcacccaaacccatggttctaaccttaaaactgattctaa 204542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 332933 - 332990
Alignment:
Q  59 cgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||| || ||||||| |||||||||||||||||||||||||||  |||| |||||||    
T  332933 cgaggtgaagggaattgctcgcaaggtgagcgatgaagttcatcattcgcgaggcgag 332990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 2856 - 2711
Alignment:
Q  32 atggcgagtgacatctaggctcactcgcgaggcgagggg-aattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgtt 130  Q
    |||||||||||| ||| || ||||||||||||||||||| |||| || || ||| || ||||||  ||||||||||||||||||| |   | | |||| |    
T  2856 atggcgagtgacttctgggttcactcgcgaggcgaggggcaattgcttgcgaggcgaacgatgatcttcatccctcgcaaggcgaaaggtggtgctcgct 2757  T
Q  131 atagtgagcgatgaatgtcagctcgggcagaatgcagattttctcc 176  Q
    || | |||||||||||||||||||||||| ||||||||||||||||    
T  2756 atggcgagcgatgaatgtcagctcgggcataatgcagattttctcc 2711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 290
Target Start/End: Complemental strand, 1391 - 1184
Alignment:
Q  86 gagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctc---gggcagaatgcagattttctccaaaact 182  Q
    ||||||||||| | ||| ||||| |||||||| ||| |||||| ||| | |||||||| ||||||| ||   |||||||||| || |||||  |||||||    
T  1391 gagcgatgaagatgatcactcgcgaggcgagaacagttactcgctatggcgagcgatggatgtcagttctacgggcagaatggag-ttttcaacaaaact 1293  T
Q  183 cacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcc 281  Q
    |||| || ||| |   ||||||||||||| | ||| ||| | |||||||||||||| | ||||||||| ||| |||||||||||||||| ||||| || |    
T  1292 cacctaattccgtaactctaaccttaaaagtgattataatcattgttctatgaataatgtaaggtctggacattatttctacatcaattcaacagatttc 1193  T
Q  282 tactcttaa 290  Q
    |||||||||    
T  1192 tactcttaa 1184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 75303 - 75162
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaaccttgttc-tatga 234  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  |||| ||   ||||||||||||||||||||| ||||||| | |   | ||||     
T  75303 gagcgatgaatgtcagctcgggcagaatgcagattttcacgaaaatgcacctaatcacatggttctaaccttaaaactgattctaaacatcaccttatgg 75204  T
Q  235 atagtctaaggtctgaacactatttctacatcaatttaacag 276  Q
    ||  ||||||||||| ||||| |||||||||||||| |||||    
T  75203 attatctaaggtctgtacactttttctacatcaattcaacag 75162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 701 - 588
Alignment:
Q  224 ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaacaggttcctactcttaattaatcaattctccaacttttaacctaactctc 323  Q
    |||| ||||||| | ||||||||||||||| | ||||| ||| |||| ||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||    
T  701 ttgtactatgaacaatctaaggtctgaacattgtttcttcattaattcaacgggttcccactcttaattaatcgattctccaaattttaacctaattctc 602  T
Q  324 -aatcctcaaaact 336  Q
     |||||||||||||    
T  601 aaatcctcaaaact 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 12395 - 12318
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||   |||| ||||||||||||||||    
T  12395 gagcgatgaatgtcagctcgggcagaatgcatattttctccaaaagtcatccaatctcatgtttctaaccttaaaact 12318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 66958 - 67032
Alignment:
Q  202 aaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaaca 275  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||||  |||||||||||||||||||| ||||    
T  66958 aaccttaaaactaattctaatcgttgttctatgaataatctaaggtctagacactatttctacatcaattcaaca 67032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 66772 - 66898
Alignment:
Q  19 cgattcactcgcaatggcgagtgacatctaggctcactcgcgaggcgaggggaattactcgc-aaggtgagcgatgaagttcatccctcgcaaggcgaga 117  Q
    ||||| |||| ||| |||||| |||| || || | |||||||||||||| |||||||||||| | || ||||||||||| | ||| ||||| ||||||||    
T  66772 cgatttactcacaaaggcgagcgacaactgggtttactcgcgaggcgagaggaattactcgctatggcgagcgatgaagatgatcactcgcgaggcgaga 66871  T
Q  118 tcagctactcgttatagtgagcgatga 144  Q
     ||| |||||| ||| | |||||||||    
T  66872 gcagttactcgctatggcgagcgatga 66898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 165895 - 165813
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||| ||||| ||   ||||||||||||||||||||| ||||    
T  165895 gagcgatgaatttcttctcgggcagaatgcagattttctccaaaattcacctaatctcatggttctaaccttaaaactgattc 165813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 29054 - 28888
Alignment:
Q  55 ctcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtca-gct 153  Q
    |||||||||||| ||||||| ||||| ||| |||||||||| || ||||||||| ||||||||   ||| ||||  |  ||||||||||||| ||| |||    
T  29054 ctcgcgaggcgaagggaattgctcgcgaggcgagcgatgaactttatccctcgcgaggcgagacatgctgctcgcgagggtgagcgatgaat-tcaggct 28956  T
Q  154 cgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||| ||||||||||||||  | ||||  || | |||  ||||||||||| ||||||||| |||||||    
T  28955 cgggaagaatgcagatttttacgaaaatccatcaaaacacatggttctaagcttaaaactgattctaa 28888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 135744 - 135629
Alignment:
Q  176 caaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaac 274  Q
    |||||||| ||||| |||||   |||||||  |||||| ||||||| | |||| ||||||||  |||||||||||||||||||||||||||||||| |||    
T  135744 caaaactctcccaattccatatctctaaccccaaaactgattctaatcattgtactatgaatcatctaaggtctgaacactatttctacatcaattcaac 135645  T
Q  275 aggttcctactcttaa 290  Q
    || || ||||| ||||    
T  135644 agatttctactattaa 135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 16106 - 16188
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    ||||||||||| ||  |||||| |||||||||||||||||||||| ||||| ||   ||||||||||||||||||||| ||||    
T  16106 gagcgatgaatttcttctcgggaagaatgcagattttctccaaaaatcacctaatctcatggttctaaccttaaaactgattc 16188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 17613 - 17528
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatc-catggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  ||  |||||| ||||||||||| ||||||||| |||||||    
T  17613 gagcgatgaatgtcagctcgggcagaatgcagattttcacgaaaatgca-tcaaatcacatggttctaagcttaaaactgattctaa 17528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 8775 - 8961
Alignment:
Q  33 tggcgagtgacatctaggctcactcgcgaggcgaggggaatta-ctcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgtta 131  Q
    |||| |||||||||| || ||||||||||||||| ||  |||  ||||| | |  ||||||||| |||||||||||| |||||||    ||| ||||  |    
T  8775 tggcaagtgacatctgggttcactcgcgaggcgaaggacatttgctcgcgaagcaagcgatgaaattcatccctcgcgaggcgaggcatgctgctcgcga 8874  T
Q  132 tagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
      | ||||||||||| |||||||||||| ||||||||||||| | ||||  |||| ||   ||||||||||||||||||||| ||||    
T  8875 gggcgagcgatgaatttcagctcgggcaaaatgcagattttcacgaaaatgcacctaatcacatggttctaaccttaaaactgattc 8961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 13985 - 14111
Alignment:
Q  86 gagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcac 185  Q
    ||||||||||||| ||| ||||| ||||||||   ||||||||  |  | ||||||||||| |||||||||||||||||||||||||| | ||||  |||    
T  13985 gagcgatgaagttaatcactcgcgaggcgagaaatgctactcgcgagggcgagcgatgaatttcagctcgggcagaatgcagattttcacgaaaatgcac 14084  T
Q  186 ccaaatccatggttctaaccttaaaac 212  Q
    | ||   || |||||||||||||||||    
T  14085 ctaatcacagggttctaaccttaaaac 14111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 22891 - 23032
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaaccttgttc-tatga 234  Q
    ||||||||||| |||||||||| ||||||||||||||| | ||||  |||| ||   ||||||||||||||||||||| |||| ||   |  || ||||     
T  22891 gagcgatgaatttcagctcgggaagaatgcagattttcacgaaaatgcacctaatcacatggttctaaccttaaaactgattccaatgatcatcatatgg 22990  T
Q  235 atagtctaaggtctgaacactatttctacatcaatttaacag 276  Q
    ||  ||||||||||| |||| |||||||||||||| ||||||    
T  22991 attatctaaggtctgtacacaatttctacatcaatctaacag 23032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 4174 - 4097
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    |||||||||||||||||||||||||||||||||||||| | |||| ||| | ||   |||| ||||||||||||||||    
T  4174 gagcgatgaatgtcagctcgggcagaatgcagattttccctaaaagtcatctaatctcatgtttctaaccttaaaact 4097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 14168 - 14091
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| ||| | ||   |||| ||||||||||||||||    
T  14168 gagcgatgaatgtcagctcaggcagaatgcagattttccccaaaagtcatctaatctcatgtttctaaccttaaaact 14091  T

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Target: scaffold0347 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 9574 - 9659
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||  |||| ||   ||||||||||| ||||||||| |||||||    
T  9574 gagcgatgaatgtctgctcgggcagaatgcagattttcacgaaaatgcacctaatcacatggttctaagcttaaaactgattctaa 9659  T

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Target: scaffold0073 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 57564 - 57645
Alignment:
Q  137 agcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattc 218  Q
    |||||||||| ||  ||||||||||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||| ||||    
T  57564 agcgatgaatttcttctcgggcagaatgcagattttctccaaaaatcacctaatctcatggttctaaccttaatactgattc 57645  T

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Target: scaffold1551 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1551
Description:

Target: scaffold1551; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 193 - 149
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  193 gagcgatgaatgtcagctcgggcagaattcagattttctccaaaa 149  T

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Target: scaffold0175 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 8453 - 8568
Alignment:
Q  176 caaaactcacccaaatccatggttctaaccttaaaactaattctaacc-ttgttctatgaatagtctaaggtctgaacactatttctacatcaatttaac 274  Q
    |||||||| ||||| |||||   ||||||| ||||||| ||||||  | |||| ||||||||| ||||||||||||||||  |||||||||||||| |||    
T  8453 caaaactctcccaattccatatctctaaccctaaaactgattctagtcattgtactatgaataatctaaggtctgaacaccgtttctacatcaattcaac 8552  T
Q  275 aggttcctactcttaa 290  Q
    || || ||||| ||||    
T  8553 agatttctactattaa 8568  T

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Target: scaffold0708 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 1941 - 1879
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    |||||||||||||  |||||| ||||| ||| ||||||||||||||||||||||| |||||||    
T  1941 actcgcgaggcgaatggaattgctcgcgaggcgagcgatgaagttcatccctcgcgaggcgag 1879  T

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Target: scaffold0609 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 5247 - 5332
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||| |  |||| ||| ||||| ||||||| |||| ||||||||  |||| |||||||||| ||||||||||||||    
T  5247 gagcgatgaatgtctgtacgggaagattgcagtttttctcaaaaattcacccaatcccattgttctaacctaaaaactaattctaa 5332  T

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Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 4982 - 5109
Alignment:
Q  54 actcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag-atcagctactcgttatagtgagcgatgaatgtcag 151  Q
    |||||||||||||||| || ||  |||| ||| ||||||||||||||||||||||| ||||||| |||| | | | | ||| | ||||||||||||||      
T  4982 actcgcgaggcgagggaaagttggtcgcgaggcgagcgatgaagttcatccctcgcgaggcgagaatcatc-atttgctatggcgagcgatgaatgtcgc 5080  T
Q  152 ctcgggcagaatgcagattttctccaaaa 180  Q
     ||||||||||||||| ||||||| ||||    
T  5081 ttcgggcagaatgcagtttttctcaaaaa 5109  T

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Target: scaffold0877 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 1452 - 1369
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattct 219  Q
    |||||||||||||||||||||||||||||||   ||||||||||| |||   ||   |||| |||||||||||||||| |||||    
T  1452 gagcgatgaatgtcagctcgggcagaatgcatgctttctccaaaagtcatttaatctcatgtttctaaccttaaaactgattct 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 4548 - 4595
Alignment:
Q  229 ctatgaatagtctaaggtctgaacactatttctacatcaatttaacag 276  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  4548 ctatgaataatctaaggtctgaacactaattctacatcaattcaacag 4595  T

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Target: scaffold0500 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 8155 - 8290
Alignment:
Q  52 tcactcgcgaggcgaggggaatta-ctcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtca 150  Q
    ||||||||||||||| |||||||  ||||| | | ||| |||||| |||||||||||| ||||||     ||| |||| |   | ||||||||||| ||     
T  8155 tcactcgcgaggcgaagggaatttgctcgcgaagcgagtgatgaacttcatccctcgcgaggcgaaggatgctgctcgctgaggcgagcgatgaatttct 8254  T
Q  151 gctcgggcagaatgcagattttctccaaaactcacc 186  Q
     ||||||||||||||||||||||||||||| |||||    
T  8255 tctcgggcagaatgcagattttctccaaaaatcacc 8290  T

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Target: scaffold0500; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 10989 - 10902
Alignment:
Q  134 gtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||||  |   ||||||| ||||| ||||||| |||| ||||||||  |||| ||||||||||||||||| |||||||    
T  10989 gtgagcgatgaatgtatgtatgggcagattgcagtttttctcaaaaattcacccaatcccattgttctaaccttaaaactgattctaa 10902  T

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Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 3768 - 3887
Alignment:
Q  54 actcgcgaggcgagg-ggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagc 152  Q
    ||||||||||||||| ||| || ||||| ||| |||||||||| |||||| ||||  ||||||||   ||| ||||     | ||||||||||||||||     
T  3768 actcgcgaggcgaggaggatttgctcgcgaggcgagcgatgaacttcatcactcgtgaggcgagaattgctgctcgcggaggcgagcgatgaatgtcagt 3867  T
Q  153 tcgggcagaatgcagatttt 172  Q
    ||||||||||||||||||||    
T  3868 tcgggcagaatgcagatttt 3887  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 34206 - 34122
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    |||||||||||||| |  |||||||| ||||| ||||||  |||| ||||||||  |||| ||||||||||||||||| |||||||    
T  34206 gagcgatgaatgtctgtacgggcagattgcag-ttttcttaaaaattcacccaatcccattgttctaaccttaaaactgattctaa 34122  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 37641 - 37580
Alignment:
Q  55 ctcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    |||||||||||| ||||||| ||||| || ||||||||||| |||||| ||||| |||||||    
T  37641 ctcgcgaggcgaagggaattgctcgcgagctgagcgatgaacttcatcactcgcgaggcgag 37580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 710 - 750
Alignment:
Q  76 ctcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  710 ctcgcaaggcgagcgatgaacttcatccctcgcaaggcgag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 266 - 222
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||    
T  266 gagcgatgaatgtcagtacgggcagaatgcagattttttccaaaa 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 9844 - 9896
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  9844 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 9896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 7852 - 7800
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| || |||||||||||||| |||||||    
T  7852 ttttctcaaaaattcacccaaacccattgtcctaaccttaaaactgattctaa 7800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 9179 - 9255
Alignment:
Q  104 ctcgcaaggcgagatcagctactcgttatagtgagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    ||||||||||||||  |||||||||  |  | ||||||||||||||||| |||| ||||||||| |||| |||||||    
T  9179 ctcgcaaggcgagacgagctactcgccagggcgagcgatgaatgtcagcacgggaagaatgcaggttttttccaaaa 9255  T

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Target: scaffold0259 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 10709 - 10773
Alignment:
Q  54 actcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcgagat 118  Q
    ||||||||||||| |||||  ||||||  || ||||||||||||||||| ||||| |||||||||    
T  10709 actcgcgaggcgaagggaaggactcgcgtggcgagcgatgaagttcatcactcgcgaggcgagat 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 18174 - 18130
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||    
T  18174 gagcgatgaatgtaagctcgggcagaatgcagtttttctcaaaaa 18130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 33820 - 33872
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| |||||||||||| |||||||||| |||||||    
T  33820 ttttctcaaaaattcacccaattccatggttctagccttaaaactgattctaa 33872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 2390 - 2442
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  2390 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 2442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 80992 - 80940
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| |||||||| |||||||||||| |||||||||| |||||||    
T  80992 ttttctcaaaaattcacccaattccatggttctagccttaaaactgattctaa 80940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 133417 - 133365
Alignment:
Q  169 ttttctccaaaactcacccaaatccatggttctaaccttaaaactaattctaa 221  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||| |||||||    
T  133417 ttttctcaaaaattcacccaaacccattgttctaaccttaaaactgattctaa 133365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 220610 - 220574
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    |||||||||||||||||||||||||||||||| ||||    
T  220610 gagcgatgaatgtcagctcgggcagaatgcagttttt 220574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 16447 - 16384
Alignment:
Q  54 actcgcgaggcgaggggaa-ttactcgcaaggtgagcgatgaagttcatccctcgcaaggcgag 116  Q
    ||||||||||||| || || || |||||  |||||||||||||||||||||||||| |||||||    
T  16447 actcgcgaggcgaaggaaagttgctcgcgtggtgagcgatgaagttcatccctcgcgaggcgag 16384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 2494 - 2563
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaacc 205  Q
    |||||||||||  |||  |||| ||| ||||| |||||||||||| ||||||||  ||||||||||||||    
T  2494 gagcgatgaataacagtacgggaagattgcagtttttctccaaaattcacccaatcccatggttctaacc 2563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 5738 - 5701
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttc 173  Q
    |||||||||||||  |||||||||||||||||||||||    
T  5738 gagcgatgaatgttggctcgggcagaatgcagattttc 5701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 8022 - 7945
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaactcacccaaatccatggttctaaccttaaaact 213  Q
    ||||||||||| ||||   ||||||| ||||| ||||||| |||| ||||||||  |||||| ||| |||||||||||    
T  8022 gagcgatgaatatcagtatgggcagattgcagtttttctcaaaaattcacccaatcccatggctctgaccttaaaact 7945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 39011 - 39048
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttc 173  Q
    |||||||||||||  |||||||||||||||||||||||    
T  39011 gagcgatgaatgttggctcgggcagaatgcagattttc 39048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 17643 - 17606
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttc 173  Q
    |||||||||||||  |||||||||||||||||||||||    
T  17643 gagcgatgaatgttggctcgggcagaatgcagattttc 17606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 3048 - 3012
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  3048 gagcgatgaatgtcagcacgggcagaatgcaggtttt 3012  T

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Target: scaffold0923 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 588 - 624
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  588 gagcgatgaatgtcagcacgggcagaatgcaggtttt 624  T

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Target: scaffold0914 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 2339 - 2399
Alignment:
Q  55 ctcgcgaggcgaggggaattactcgcaaggtgagcgatgaagttcatccctcgcaaggcga 115  Q
    |||||||||||| ||||||| || || ||| |||||||||| |||||| ||||| ||||||    
T  2339 ctcgcgaggcgaagggaattgcttgcgaggcgagcgatgaacttcatcactcgcgaggcga 2399  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 5848 - 5808
Alignment:
Q  77 tcgcaaggtgagcgatgaagttcatccctcgcaaggcgaga 117  Q
    |||| ||| ||||||||||||||||||||||| ||||||||    
T  5848 tcgcgaggcgagcgatgaagttcatccctcgcgaggcgaga 5808  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 20983 - 21015
Alignment:
Q  76 ctcgcaaggtgagcgatgaagttcatccctcgc 108  Q
    ||||||||| |||||||||||||||||||||||    
T  20983 ctcgcaaggcgagcgatgaagttcatccctcgc 21015  T

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Target: scaffold0261 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 8691 - 8655
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  8691 gagcgatgaatgtcagcacgggcagaatgcaggtttt 8655  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 16851 - 16815
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagatttt 172  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  16851 gagcgatgaatgtcagcacgggcagaatgcaggtttt 16815  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 65907 - 65864
Alignment:
Q  136 gagcgatgaatgtcagctcgggcagaatgcagattttctccaaaa 180  Q
    ||||||||||||| |||||||||||||||||| |||||| |||||    
T  65907 gagcgatgaatgttagctcgggcagaatgcag-ttttcttcaaaa 65864  T

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