View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12095_high_4 (Length: 508)
Name: NF12095_high_4
Description: NF12095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12095_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 445; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 1 - 490
Target Start/End: Original strand, 3661040 - 3661535
Alignment:
| Q |
1 |
tcaagtttgatgagcaagttaacagctttaagagaaagagctggaaaatcgaaatgggtatgcgtagaaaacgaagatctaatagcaataaaagaggatt |
100 |
Q |
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| T |
3661040 |
tcaagtttgatgagcaagttaacagctttgagagaaagagctggaaaatcgaaatgggtatgagtagaaaacgaagatctaatagcaataaaagaggatt |
3661139 |
T |
|
| Q |
101 |
tgatagatgcaagtagtttaaggttccttagtgttcttgatctacgaacgaggaaagaacggaaatgggtttggattacacgtgctgcagaatgacgcgg |
200 |
Q |
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| T |
3661140 |
tgatagatgcaagtagtttaaggttccttagtgttcttgatctacgaacgaggaaagaacggaaatgggtttggattacacgtgcagcagaatgacggag |
3661239 |
T |
|
| Q |
201 |
agattgagattgatgggtttgatgttgattgagagaagattcaagagattcaatgcggttaatgagagaagagagtgtagattgatgattttgatgaagg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
3661240 |
agattgagattgatgggtttgatgttgattgagagaagattcaagagattcaatgcggttaatgagagaagagagtgtggattgatgattttgatgaagg |
3661339 |
T |
|
| Q |
301 |
gtttgtgatttggggtggtgtacgaggttgtcgtgtacgaggtggtcgtgtacgagattgtggtgtacgaggtggttgagttgtggagaaaggaggacgg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3661340 |
gtttgtgatttggggtggtgtacgaggttgtcgtgtacgaggtggtcgtgtacgagattgtggtgtacgaggtggttgagttgtggagaaaggaggacgg |
3661439 |
T |
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| Q |
401 |
aggaaatggtttgtacgaggtggtcgtgttgtggagaaagatggg------gtggttgtggtgtgggggtgtagcatgggtaagagggggtgcagt |
490 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3661440 |
aggaaatggtttgtatgaggtggtcgtgttgtggagaaagatggggtggttgtggttgtggtgtgggggtgtagcatgggtaagagggggtgcagt |
3661535 |
T |
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