View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12095_low_14 (Length: 374)
Name: NF12095_low_14
Description: NF12095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12095_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 19 - 369
Target Start/End: Complemental strand, 37129139 - 37128789
Alignment:
| Q |
19 |
cttaaattagcctgaaacatagcatgaattgataaggataataaggttgttctttaggttcttaggtcgctcaaccctgnnnnnnnntgtcgatcaaaaa |
118 |
Q |
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| T |
37129139 |
cttaaattagcctgaaacatagcatgaattgataaggataataaggttgttctttaggttcttaggtcgctcaaccctgaaaaaaaatgtcgatcaaaaa |
37129040 |
T |
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| Q |
119 |
atagtttttgatggatagtaaaaataagtcaatctgaaaatactccattccaatagatctgtgtcatcgaaagatacattttgataaattgagagctttt |
218 |
Q |
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| T |
37129039 |
atagtttttgatggatagtaaaaataaatcaatctgaaaatactccattccaatagatttgtgttatcgaaagatacattttgataaattgagagctttt |
37128940 |
T |
|
| Q |
219 |
gagtaaaaatgaagagtcgataaagcaattgcctaaggataatgggctgaaaatttcacttgcgttcggctccttctacgaattggcaggcatatatagg |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
37128939 |
gagtaaaaatgaagagtcgataaagcaattgcctaaggataatgggctgaaaatttcacttgcgttcggctccttctacgaattggcaggcatatattgg |
37128840 |
T |
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| Q |
319 |
tttgacaaccaataatataatgaaaaacctatttttcctccctatgcttct |
369 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||| |||| |
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| T |
37128839 |
tttgacaaccaataatataatgaaaaacctattttgcctccctatggttct |
37128789 |
T |
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