View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12095_low_18 (Length: 266)
Name: NF12095_low_18
Description: NF12095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12095_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 1722656 - 1722905
Alignment:
| Q |
1 |
ggggtggagaatatacataggtgctaatatatcacatgtttctaggtggcataaaacgtgaattgttcccttgattccatattcatgagatgctt-ggaa |
99 |
Q |
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| T |
1722656 |
ggggtggagaatatacataggtgctaatatatcacatgtttctaggtggcataaaacgtgaattgttcccttgattccatattcatgagatgctttggaa |
1722755 |
T |
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| Q |
100 |
gatggagaataatatattgttgaaatttgagtaacgtagtttttatatcatctcttcaagaaagattctcacaaattttaattgttatcttgtaaaggat |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1722756 |
gatggagaataatatattgttgaaatttgagtaacgtagtttttatatcatctcttcaagaaagattctcacaaattttaattgttatcttgtaaaggat |
1722855 |
T |
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| Q |
200 |
aaagcaaatcaagccattacttcttattaggacgagtggatggatcactt |
249 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1722856 |
aaagcaaatcaagccattacttcttattaggacgagtggatggatcactt |
1722905 |
T |
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