View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12095_low_20 (Length: 259)
Name: NF12095_low_20
Description: NF12095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12095_low_20 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 2672814 - 2673074
Alignment:
| Q |
1 |
aagaatagaggatttcatcaatcagatgacctaaatctccttggacatgtaagcaaaaacccctagtttacttgaatgataattttctagcatgattttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
2672814 |
aagaatagaggatttcatcaatcagatgacctaaatctccttggacatgtaagcaaaaacgcctagtttacttgaatgataattttctagcatgattttc |
2672913 |
T |
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| Q |
101 |
gactag--tttaaagtgtaaaccaaatttacacatgcatctgatgaaaatctactattcagacatctcatcatattattctaatcaaatcttaatatcaa |
198 |
Q |
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|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2672914 |
gactagagtttaaagtgtaaaccaaatttacacatgcatctaatgaaaatctactattcagacatctcatcatattattctaatcaaatcttaatatcaa |
2673013 |
T |
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| Q |
199 |
tgatatgaagtagcaaaataaaatgttataggtatgccctcaacattattttgtgctaatt |
259 |
Q |
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||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
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| T |
2673014 |
tgatatgaagtagcaaaataaaatgttctaggtatgcccttaacattattttgtgctaatt |
2673074 |
T |
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