View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12096_low_9 (Length: 266)

Name: NF12096_low_9
Description: NF12096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12096_low_9
NF12096_low_9
[»] chr5 (13 HSPs)
chr5 (1-256)||(14192792-14193047)
chr5 (9-256)||(25542773-25543020)
chr5 (9-256)||(17871617-17871864)
chr5 (1-256)||(37372920-37373175)
chr5 (1-256)||(8428554-8428809)
chr5 (11-256)||(39883177-39883422)
chr5 (9-256)||(27881076-27881323)
chr5 (1-256)||(3689961-3690216)
chr5 (1-256)||(3876571-3876826)
chr5 (9-184)||(37261307-37261482)
chr5 (1-143)||(24629954-24630096)
chr5 (1-143)||(10025047-10025189)
chr5 (1-143)||(30346637-30346779)
[»] scaffold0017 (1 HSPs)
scaffold0017 (9-256)||(186546-186793)
[»] chr2 (11 HSPs)
chr2 (1-256)||(24269050-24269305)
chr2 (4-256)||(24245812-24246064)
chr2 (9-256)||(27192481-27192728)
chr2 (9-256)||(27842295-27842542)
chr2 (9-254)||(17683811-17684056)
chr2 (4-252)||(27509361-27509609)
chr2 (1-256)||(21395354-21395609)
chr2 (1-256)||(41920153-41920408)
chr2 (1-256)||(28666152-28666407)
chr2 (1-256)||(37824986-37825241)
chr2 (1-197)||(35609669-35609865)
[»] scaffold1139 (1 HSPs)
scaffold1139 (1-256)||(984-1239)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-256)||(5240-5494)
[»] chr4 (8 HSPs)
chr4 (1-256)||(1860661-1860916)
chr4 (1-256)||(49710157-49710411)
chr4 (1-256)||(35855891-35856146)
chr4 (1-256)||(38518080-38518335)
chr4 (1-256)||(49786808-49787063)
chr4 (102-256)||(13337320-13337474)
chr4 (1-143)||(55559131-55559273)
chr4 (192-256)||(618204-618268)
[»] chr3 (13 HSPs)
chr3 (1-256)||(10110584-10110839)
chr3 (1-256)||(10000391-10000646)
chr3 (1-244)||(50410156-50410399)
chr3 (1-256)||(32755-33010)
chr3 (9-256)||(13530031-13530278)
chr3 (1-256)||(52918050-52918304)
chr3 (1-256)||(10237540-10237794)
chr3 (1-256)||(10968762-10969016)
chr3 (9-256)||(11368639-11368887)
chr3 (9-256)||(11362250-11362498)
chr3 (1-190)||(46913055-46913244)
chr3 (1-234)||(10038624-10038847)
chr3 (1-163)||(47692953-47693115)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-257)||(18990-19246)
[»] chr7 (9 HSPs)
chr7 (9-256)||(5828535-5828782)
chr7 (9-256)||(21070042-21070289)
chr7 (1-256)||(7036704-7036959)
chr7 (9-256)||(22843796-22844043)
chr7 (1-256)||(12781128-12781384)
chr7 (1-256)||(9001125-9001380)
chr7 (1-256)||(12785958-12786213)
chr7 (1-143)||(42232068-42232210)
chr7 (146-190)||(18939139-18939183)
[»] chr6 (8 HSPs)
chr6 (9-256)||(30881319-30881566)
chr6 (1-256)||(2202159-2202414)
chr6 (9-256)||(18344117-18344364)
chr6 (9-254)||(10187536-10187781)
chr6 (1-256)||(29640008-29640263)
chr6 (1-256)||(15333627-15333882)
chr6 (1-256)||(31510179-31510434)
chr6 (1-151)||(12517372-12517522)
[»] chr8 (6 HSPs)
chr8 (1-256)||(25218545-25218800)
chr8 (1-256)||(21113724-21113979)
chr8 (1-256)||(30307161-30307416)
chr8 (1-256)||(7821822-7822077)
chr8 (9-230)||(31978533-31978754)
chr8 (1-256)||(25209027-25209267)
[»] chr1 (11 HSPs)
chr1 (1-256)||(2453097-2453352)
chr1 (9-256)||(36207207-36207454)
chr1 (1-256)||(37390132-37390387)
chr1 (1-254)||(2329153-2329403)
chr1 (4-256)||(18148675-18148927)
chr1 (1-256)||(16042009-16042264)
chr1 (1-256)||(6310974-6311230)
chr1 (14-256)||(48775315-48775557)
chr1 (9-190)||(48238523-48238704)
chr1 (1-143)||(52500653-52500795)
chr1 (137-255)||(48233498-48233616)
[»] scaffold0356 (1 HSPs)
scaffold0356 (9-256)||(17856-18096)
[»] scaffold0073 (2 HSPs)
scaffold0073 (1-256)||(31917-32171)
scaffold0073 (1-230)||(19441-19670)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-256)||(321316-321571)
[»] scaffold0550 (1 HSPs)
scaffold0550 (1-257)||(551-807)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-256)||(48916-49171)
[»] scaffold0003 (2 HSPs)
scaffold0003 (9-256)||(182803-183050)
scaffold0003 (9-256)||(165522-165770)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-222)||(16668-16889)
[»] scaffold0118 (1 HSPs)
scaffold0118 (9-143)||(28727-28861)
[»] scaffold0888 (1 HSPs)
scaffold0888 (1-114)||(24-137)
[»] scaffold1424 (1 HSPs)
scaffold1424 (9-72)||(1640-1703)
[»] scaffold0107 (1 HSPs)
scaffold0107 (198-256)||(39937-39995)


Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 14193047 - 14192792
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14193047 atcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 14192948  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14192947 gaattaagcgttggtgcgagtattcccctttcttggaaaaatagcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 14192848  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  14192847 acagatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcatttca 14192792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 25543020 - 25542773
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25543020 tttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 25542921  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||    
T  25542920 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacatattt 25542821  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  25542820 gttgtgtccgatatgagaaaatcttcaggaatttctaccttcatttca 25542773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 17871864 - 17871617
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17871864 tttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaatcaag 17871765  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||    
T  17871764 cgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacggattt 17871665  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17871664 gttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttca 17871617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 37372920 - 37373175
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| | |||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  37372920 atcagaattatcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcataaattggttaacatgctcaact 37373019  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  37373020 gaatcaagcgttggtgcgagtattcccctttcttcgaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 37373119  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||    
T  37373120 acggatttgttatgtctgatatcagcaaatcttcaggaatttctaccttcatttca 37373175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 8428809 - 8428554
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    |||||||  ||||||||||| ||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |    
T  8428809 atcagaatattcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaatt 8428710  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  8428709 gaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 8428610  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  8428609 acggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttca 8428554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 39883177 - 39883422
Alignment:
Q  11 tcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcg 110  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  39883177 tcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcaacgacatcataaattcgttaacatgctcaactgaatcaagcg 39883276  T
Q  111 ttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggatttgt 210  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  39883277 ttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatcaacggatttgt 39883376  T
Q  211 tgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||| |||||||||| |||||  |||||||||||||||    
T  39883377 tgtgtccgatatcagcaaatctttaggaatatctaccttcatttca 39883422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 27881076 - 27881323
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||| | ||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  27881076 tttcacccgatctacaaatagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgctcagctgaatcaag 27881175  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  27881176 cgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatcaacggattt 27881275  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||| ||||||||| |||||||||||||||  ||||||||| ||||||    
T  27881276 gttgggtccgatatcagcaaatcttcaggagtttctacctttatttca 27881323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 3689961 - 3690216
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||| ||||||||| |||| |||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||     
T  3689961 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3690060  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||| | ||||||| ||||| || |||||||||| ||||||||||||||||||||| |||||||| ||  |||||||||    
T  3690061 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtcaccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3690160  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||| ||||||||| || ||||||||||||||||  |||| ||||||||||||||||    
T  3690161 acgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatttca 3690216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 3876826 - 3876571
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||| ||||||||| |||| |||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||     
T  3876826 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3876727  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||| | ||||||| ||||| || ||||| |||| ||||||||||||||||||||| |||||||| ||  |||||||||    
T  3876726 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtccccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3876627  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||| ||||||||| || ||||||||||||||||  |||| ||||||||||||||||    
T  3876626 acgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatttca 3876571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 37261307 - 37261482
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  37261307 tttcacccgatcgacaaacagaatcagagcttaaatactatttctcttcacctggaatcagtgacatcatatattcattaatatgctcaactgaatcaag 37261406  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaag 184  Q
     ||||| || ||||||||||||||||| ||||||| |||||||  ||||||||||||||||| |||||||||||||    
T  37261407 tgttggcgcaagtattcccctttcttgaaaaaataacgggtcattaaggttatcattcaaattgggatacacaaag 37261482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 24630096 - 24629954
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24630096 atcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaact 24629997  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24629996 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 24629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 10025047 - 10025189
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||| ||| ||||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||    
T  10025047 atcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacttggaatcaatgacatcatatattcgttaacatgttcaact 10025146  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10025147 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 10025189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30346779 - 30346637
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30346779 atcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaact 30346680  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 143  Q
     ||||||| ||||||||||||||||||||||||||||||||||    
T  30346679 taatcaagtgttggtgcgagtattcccctttcttggaaaaata 30346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 186546 - 186793
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  186546 tttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcagctgaatcaag 186645  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  186646 cgttggtgcgagtattcccctttattggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacagattt 186745  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  186746 gttgtgtacgatatgagcaaatcttcaggaatttctaccttcatttca 186793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 24269305 - 24269050
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24269305 atcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaact 24269206  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  24269205 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacatca 24269106  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24269105 acagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttca 24269050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 4 - 256
Target Start/End: Original strand, 24245812 - 24246064
Alignment:
Q  4 agaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 103  Q
    |||| |||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24245812 agaattttcacccgatcgacaaacagaatcagatcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 24245911  T
Q  104 tcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacg 203  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||    
T  24245912 tcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaggtctataagtgacatccacg 24246011  T
Q  204 gatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  24246012 gatttgttgtgtccgttatgagcaaatctttaggaatttctaccttcatttca 24246064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 27192481 - 27192728
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27192481 tttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgctcaactgaatcaag 27192580  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  27192581 cgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacagattt 27192680  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  27192681 gttgtgtccgatatgagcaaatctttaggaatttctaccttcatttca 27192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 27842295 - 27842542
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27842295 tttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgctcaactgaatcaag 27842394  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  27842395 cgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacagattt 27842494  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  27842495 gttgtgtccgatatgagcaaatctttaggaatttctaccttcatttca 27842542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 17684056 - 17683811
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17684056 tttcacccgatcgacaaacaaaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaattgaatcaag 17683957  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17683956 cgttggagcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggattt 17683857  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcattt 254  Q
    ||||||||| |||||||| ||| |||||||| ||||||||||||||    
T  17683856 gttgtgtccaatatgagcgaatattcaggaatttctaccttcattt 17683811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 4 - 252
Target Start/End: Original strand, 27509361 - 27509609
Alignment:
Q  4 agaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 103  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27509361 agaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 27509460  T
Q  104 tcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacg 203  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  27509461 tcaagcgttgatgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgatatcaacg 27509560  T
Q  204 gatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcat 252  Q
     ||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  27509561 aatttgttgtgtccgacatgagcaaatctttaggaatttctaccttcat 27509609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 21395354 - 21395609
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  21395354 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 21395453  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||| | |||||||    
T  21395454 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatatacaaagtctataagcgacatca 21395553  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  21395554 acggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttca 21395609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 41920408 - 41920153
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||||| || ||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||| || |    
T  41920408 atcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttatcttcacctggaatcaacgacatcataaattcgttaacatgcttaatt 41920309  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  41920308 gaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 41920209  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  41920208 acggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttca 41920153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 28666407 - 28666152
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| ||||||| |||| ||||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |    
T  28666407 atcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctcaatt 28666308  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  28666307 gaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtgacatca 28666208  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||    
T  28666207 acggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttca 28666152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 37825241 - 37824986
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| ||||||| |||| ||||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |    
T  37825241 atcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctcaatt 37825142  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  37825141 gaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacagagtctataagtgacatca 37825042  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||    
T  37825041 acggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttca 37824986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 35609669 - 35609865
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35609669 atcagaattttcactcgatcgacaaacataatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatactcaact 35609768  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgaca 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  35609769 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaatgttatcattcaaatcggaatacacaaagtctataagtgaca 35609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 984 - 1239
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||| |||||| || ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  984 atcagaattttcgcccgattgacaaacaaaatcagagcttaaatactctttctcttcacttggaatcagtgacatcatatattcgttaacatgctcgact 1083  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1084 gaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 1183  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1184 acggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttca 1239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 5494 - 5240
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5494 atcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagtgacatcatatattcgttaacatgctcaact 5395  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  5394 gaatcaagcgttggtgcgagtattcccctttcttgg-aaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacatca 5296  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |  |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5295 atagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttca 5240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 1860661 - 1860916
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  1860661 atcagaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcacccagaatcagtgacatcatatattcgttaacatgctcaact 1860760  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  1860761 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacatca 1860860  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || |||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  1860861 acagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatttca 1860916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 49710157 - 49710411
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  49710157 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 49710256  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  49710257 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 49710356  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  49710357 a-ggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttca 49710411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 35855891 - 35856146
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  35855891 atcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 35855990  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  35855991 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 35856090  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  35856091 acggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttca 35856146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 38518080 - 38518335
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |    
T  38518080 atcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaatt 38518179  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  38518180 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacaaagtctataagtgacatca 38518279  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  38518280 acggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttca 38518335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 49787063 - 49786808
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| ||||||| |||| ||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |    
T  49787063 atcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaatatgctcaatt 49786964  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  49786963 gaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtgacatca 49786864  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  49786863 acggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttca 49786808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 13337320 - 13337474
Alignment:
Q  102 aatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaa 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||    
T  13337320 aatcaagcgttgatgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacataaa 13337419  T
Q  202 cggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  13337420 cggatttgttgtgtccgatatcagcaaatcttcatgaatttctaccttcatttca 13337474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 55559273 - 55559131
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55559273 atcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaact 55559174  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  55559173 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 55559131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 618268 - 618204
Alignment:
Q  192 gtgacatcaacggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  618268 gtgacatgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttca 618204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 10110584 - 10110839
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10110584 atcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 10110683  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||    
T  10110684 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtgacatca 10110783  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  10110784 acagatttgttgcgtctgatatgagcaaatcttcaggaatttctaccttcatttca 10110839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 10000391 - 10000646
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10000391 atcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 10000490  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||| ||||    
T  10000491 gaatcaagcgttggtgcgagtattcctctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtgatatca 10000590  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || |||||||||  || |||||||||||||||||||||| ||||||||||||||||    
T  10000591 acagatttgttgcatctgatatgagcaaatcttcaggaatttctaccttcatttca 10000646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 50410156 - 50410399
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  50410156 atcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatatttgttaacatgctcgact 50410255  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50410256 gaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtgggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 50410355  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttct 244  Q
     |||||||||||||||||||||||| ||||||||||||| ||||    
T  50410356 gcggatttgttgtgtccgatatgagaaaatcttcaggaatttct 50410399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 32755 - 33010
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||||| || ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  32755 atcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgctcaact 32854  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  32855 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtccataagtgacatca 32954  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||    
T  32955 acggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttca 33010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 13530031 - 13530278
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    ||||||| |||||| || ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||    
T  13530031 tttcacctgatcgacaagcagaaccagagcttaaatactctttctcttcacctggactcagtgacatcatatattcgttaaaatgctcaactgaatgaag 13530130  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13530131 tgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggattt 13530230  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||| ||||||| |||||||||  ||| ||||||||||||||||    
T  13530231 gttgtgtctgatatgaccaaatcttctagaatttctaccttcatttca 13530278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 52918050 - 52918304
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52918050 atcagaattttcacccgatcgacaaacaaaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 52918149  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  52918150 gaatcaagcgttggtgcgggtattcccctttcttggaaaaatagcgagtcaccaaggttatcattcaaatcgggatacacgaagtctataagtggcatca 52918249  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || ||||||||||||||| ||   ||||||| ||||||| ||||||||||||||||    
T  52918250 acagatttgttgtgtccggtaacggcaaatc-tcaggaatttctaccttcatttca 52918304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 10237540 - 10237794
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10237540 atcagaattttcacccgatcaacaaacataatcaaagcttaa-tactctttctcttcacctggaatcagtaacatcatatattcgttaacatgctcaact 10237638  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||    
T  10237639 gaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtgacatca 10237738  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || ||||||||| ||| ||||||||||| |||||||||| ||||||| | ||||||    
T  10237739 acagatttgttgcgtctgatatgagcaattcttcaggaatttctaccgttatttca 10237794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 10969016 - 10968762
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10969016 atcagaattttcacccgatcgacaaacaaaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctaaact 10968917  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  10968916 gaatcaagcgttggtgcgagtattccccttgcttagaaaaatagcaggtcacgaagtttatcattcaaatcgggatacacaaagtctataagtggcatca 10968817  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||||||||| |||||||| |||| || ||||||||||||||||    
T  10968816 acggatttgttgtgtccgatatcagcaaatc-tcagaaatttctaccttcatttca 10968762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 11368639 - 11368887
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||| ||||| |||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11368639 tttcacccaatcgacaaattgaatcagagcttaaatactctttctcttcacctggaatcactgacatcatatattcgttaacatgctcaaccgaatcaag 11368738  T
Q  109 cgttggtgcgagtattcccctttcttgg-aaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggatt 207  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  11368739 cgttggtgcgagtattcccttttcttggaaaaaagagcgggtcaccaatgttatcattcaaatcgggatatacaaagtctatgagtgacatcaacggatt 11368838  T
Q  208 tgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||| ||||||||||||||||| |||| |||||| |||||||||    
T  11368839 tgttgtgtcggatatgagcaaatcttcgggaatttctacattcatttca 11368887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 11362250 - 11362498
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatac-tctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaa 107  Q
    |||| ||||||||| |||| |||||| |||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11362250 tttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctcaaccgaatcaa 11362349  T
Q  108 gcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggatt 207  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||  |||||||||||| |||    
T  11362350 gcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgacatcaacgaatt 11362449  T
Q  208 tgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||| || |||||||| |||||||| |||| |||  |||||||||||    
T  11362450 tgttgtatcggatatgagtaaatcttcgggaatttcccccttcatttca 11362498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 46913055 - 46913244
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| || | ||||||||| ||||| |||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  46913055 atcagaatttccccccgatcgacaaacataatcaaagcttaaatactatttttcttcacctggaattggtgacatcatatattcgttaacatgctcaact 46913154  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctata 190  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  46913155 gaatcaagcgttggtgcgagtattctcctttcttggaaaaatagcgggtcgccaaagttatcattcaaatcgggatacacaaagtctata 46913244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10038624 - 10038847
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||||||||| | |||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||| |    
T  10038624 atcagaattttcacccgatcgacaaacagaatgagagcttaaataatatttctcttcacctggaatcagtgacatcatatattcattaatatgctcaatt 10038723  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||          |||||||    
T  10038724 gaatcaagtgttggcgcgagtattcccctttcttggaaaaatagcgggtcactaaggttatcattcaaattgggatacacaaa----------gacatca 10038813  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttc 234  Q
    || ||||||||||||| ||||| |||||||||||    
T  10038814 acagatttgttgtgtctgatataagcaaatcttc 10038847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 47692953 - 47693115
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| ||||  |||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  47692953 atcagaattttcgtccgatcgacaaacagaatcagaggttaaatactctttctcttcacctggaattagtgacatcatgtattcgttaacatgctcaact 47693052  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatca 163  Q
    |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||    
T  47693053 gaatcaagcgttggtgcgaggattcccctttcttgggaaaattgtgggtcaccaaggttatca 47693115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 18990 - 19246
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18990 atcagaattttcactcgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 19089  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  19090 gaatcaagcgttggtgcgagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtgacatca 19189  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttcat 257  Q
    ||  |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  19190 acatatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcatttcat 19246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 5828782 - 5828535
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5828782 tttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgagtcaag 5828683  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  |||||    
T  5828682 tgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacatcaaaagattt 5828583  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5828582 gttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttca 5828535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 21070289 - 21070042
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21070289 tttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcaccaggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 21070190  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21070189 cgttggtgcgagtattcccctttcttggaaaaatagcaggttaccaaggttatcattcagatcgggatacacaaagtctataagtgacatcaacggattt 21070090  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21070089 gttgtgtctgatatgagcaaatcttcaggaatttctaccttcatttca 21070042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 7036704 - 7036959
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  7036704 atcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 7036803  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  7036804 gaatcaagcgttggtgcgagtattcccctttcttggaaaagtagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 7036903  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  7036904 acggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatttca 7036959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 22843796 - 22844043
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22843796 tttcacccgatcgacaaacagaaacagaacttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaatcaag 22843895  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||| |||||    
T  22843896 cgttggtgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacagattt 22843995  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  22843996 gttgtgtcagatatgagcaaatcttcaagaatttctaccttcatttca 22844043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 12781384 - 12781128
Alignment:
Q  1 atcagaagtttcacccgatcg-aaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaac 99  Q
    ||||||| ||||||||||||  ||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  12781384 atcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaac 12781285  T
Q  100 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  12781284 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatc 12781185  T
Q  200 aacggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||||  |||| |||||||||||||||| ||||||||||||||||    
T  12781184 aacggatttgttgtgtcttatatcagcaaatcttcaggaatttctaccttcatttca 12781128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 9001380 - 9001125
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  9001380 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctcaact 9001281  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||| |||||||||||| | |||||||    
T  9001280 gaatcaagcgttagtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcaatcagatcgggataaacaaagtctataagagacatca 9001181  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  9001180 acggatttgttgtgtccgatatcaacaaatcttcaagaatttctaccttcatttca 9001125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 12786213 - 12785958
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| ||||||| |||| ||||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |    
T  12786213 atcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctcaatt 12786114  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  12786113 gaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtgacatca 12786014  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||    
T  12786013 acggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttca 12785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 42232068 - 42232210
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||| ||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42232068 atcagaattttcacccgagcgacaaacaaaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaact 42232167  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 143  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  42232168 gaatcaagcgttggtgagagtattcccctttcttggaaaaata 42232210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 18939139 - 18939183
Alignment:
Q  146 gggtcaccaaggttatcattcaaatcgggatacacaaagtctata 190  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  18939139 gggttaccaaagttatcattcaaatcgggatacacaaagtttata 18939183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 30881319 - 30881566
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30881319 tttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaatcaag 30881418  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||    
T  30881419 cgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacggattt 30881518  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30881519 gttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttca 30881566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 2202414 - 2202159
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  2202414 atcagaattttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttctact 2202315  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2202314 gaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 2202215  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||| |||||| |||||||||||||||||| |||| |||||| |||||||||    
T  2202214 acggatttattgtgttcgatatgagcaaatcttcgggaatttctacattcatttca 2202159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 18344117 - 18344364
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  18344117 tttcacccgatcgacaaatagaatcaaagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgtcaacatgctcaactgaatcaag 18344216  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  18344217 cgttggtgcaagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatgaacggattt 18344316  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18344317 gttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttca 18344364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 10187536 - 10187781
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10187536 tttcacccgatcgacaaacagaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaattgaatcaag 10187635  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
     ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10187636 tgttggagcgagtattcccttttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggattt 10187735  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcattt 254  Q
     |||||||| |||||||||||| |||||||| ||||||||||||||    
T  10187736 tttgtgtccaatatgagcaaatattcaggaatttctaccttcattt 10187781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 29640263 - 29640008
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||| | || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  29640263 atcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 29640164  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  29640163 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcaggatacacaaagtctataagtgacatca 29640064  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || |||||||||||   ||||| |||||||||||||||| ||||||||||||||||    
T  29640063 acagatttgttgtggttgatatcagcaaatcttcaggaatttctaccttcatttca 29640008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 15333627 - 15333882
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| ||||||| |||| | ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  15333627 atcagaattttcacctgatctacaaacagaatcagagcctaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 15333726  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  15333727 gaatcaagtgttggtgcgagtattcccatttgttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctattagtgacatca 15333826  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||  || |||||| | |||||||||||||| ||||||||||||||||    
T  15333827 acggatttgttacgtacgatatcaacaaatcttcaggaatttctaccttcatttca 15333882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 31510434 - 31510179
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||| | || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31510434 atcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 31510335  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||  |||||||||||||||||| |||||||||    
T  31510334 gaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagttggtcaccaaggttatcattcagattaggatacacaaagtctataagtgacatca 31510235  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || |||||||||||   ||||| |||||||||| || || ||||||||||||||||    
T  31510234 acagatttgttgtggttgatatcagcaaatcttaagaaatttctaccttcatttca 31510179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 12517372 - 12517522
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||| |||   ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12517372 atcagaattttcaccccatcatcaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 12517471  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtca 151  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||||    
T  12517472 gaatcaagcgttggtgcaaatattcccctttcttggaaaaatagctggtca 12517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 25218800 - 25218545
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  25218800 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 25218701  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25218700 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 25218601  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  25218600 acggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttca 25218545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 21113979 - 21113724
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21113979 atcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaact 21113880  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  21113879 gaatcaagcgttggtgcaagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtgacatca 21113780  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    || ||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  21113779 acagatttgttgtgtccgatataagcaaatcttcaggaatttctaccttcatttca 21113724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 30307161 - 30307416
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  30307161 atcagaattttcacccgatctaaaaatagaatcggagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 30307260  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  30307261 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcgttcagatcgggatacacaaagtctataagtgacatca 30307360  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| |||||||||    
T  30307361 acggatttgttgtgtccgatatcagcaaatcttcaggaatttctacattcatttca 30307416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 7821822 - 7822077
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  7821822 atcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctgaaatcagcgacatcataaattcgttaacatgctcaact 7821921  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  7821922 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcggaatacacaaagtctataagtgacatca 7822021  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||    
T  7822022 acggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttca 7822077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 9 - 230
Target Start/End: Complemental strand, 31978754 - 31978533
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||| ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||    
T  31978754 tttcccccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgctcaactgaatcaag 31978655  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| |||||    
T  31978654 cgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtgacatcaacagattt 31978555  T
Q  209 gttgtgtccgatatgagcaaat 230  Q
    |||||| ||||||| |||||||    
T  31978554 gttgtgcccgatatcagcaaat 31978533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 25209267 - 25209027
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  25209267 atcagaattttcgcccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 25209168  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||               |||||||||| |||||||||    
T  25209167 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatt---------------aaagtctataagtgacatca 25209083  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| || || |||||||||||||||| ||||||||||||||||    
T  25209082 acggatttgttgtgtctgacatcagcaaatcttcaggaatttctaccttcatttca 25209027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 2453352 - 2453097
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2453352 atcagaattttcacccgatcgacaaatagaatcagagcctaaatactctttctcttcacctggaattagtgacatcatatattcgttaacatgctcaact 2453253  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  2453252 caataaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcggaattcacaaagtctataagtgacatca 2453153  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  2453152 acggatttgttgtgttcgatatgagcaaatcttcaggaatttctaccttcatttca 2453097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 36207207 - 36207454
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  36207207 tttcacccgatcgacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaat 36207306  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
     ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36207307 tgttggggcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggattt 36207406  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||| |||||||| ||||| ||||||| ||||||||||| ||||    
T  36207407 gttgtgtcggatatgagaaaatcatcaggaatttctaccttcaattca 36207454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 37390387 - 37390132
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| ||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  37390387 atcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 37390288  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  37390287 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 37390188  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  37390187 acggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttca 37390132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 2329153 - 2329403
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2329153 atcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcgact 2329252  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||   ||||||| |||||||||    
T  2329253 gaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtggatcaccaaggttatcattcaaatcgggatacac---gtctataagtgacatca 2329349  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcattt 254  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2329350 acggatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcattt 2329403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 256
Target Start/End: Original strand, 18148675 - 18148927
Alignment:
Q  4 agaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 103  Q
    |||| ||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18148675 agaattttcatccgatcgacaaacagaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaaatgaa 18148774  T
Q  104 tcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||     
T  18148775 tcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaattgagatacacaaagtcgataagtgacatcaaca 18148874  T
Q  204 gatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||||||||| |||||||||  || ||||||||||||||||    
T  18148875 gatttgttgtgtccgatatgagaaaatcttcataaatttctaccttcatttca 18148927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 16042009 - 16042264
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  16042009 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgctcaact 16042108  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||| || ||||||||||||||||||| | |||||||    
T  16042109 gaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagattgggatacacaaagtctataagcgacatca 16042208  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  16042209 acggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttca 16042264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 6311230 - 6310974
Alignment:
Q  1 atcagaagtttcacccgatcg-aaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaac 99  Q
    ||||||| ||||||||||||  ||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  6311230 atcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaac 6311131  T
Q  100 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  6311130 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatc 6311031  T
Q  200 aacggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  6311030 aacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatttca 6310974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 256
Target Start/End: Complemental strand, 48775557 - 48775315
Alignment:
Q  14 cccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttg 113  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||    
T  48775557 cccgatcgacaaactgaatcagagcttaaatactctttctcttcacctggaatcatttacatcatatattcgttaacatgctcaaccgaatcaagcgttg 48775458  T
Q  114 gtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggatttgttgt 213  Q
    |||||||||||||| ||||||||||||| ||| ||||||||| |||||||||| |||||||||| ||||||| |||  |||||||||| | |||||||||    
T  48775457 gtgcgagtattcccttttcttggaaaaagagcaggtcaccaatgttatcattctaatcgggatatacaaagtgtattagtgacatcaaagaatttgttgt 48775358  T
Q  214 gtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||| ||||||||||||||||| |||| ||||||||||||||||    
T  48775357 gtcggatatgagcaaatcttcgggaatttctaccttcatttca 48775315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 48238704 - 48238523
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48238704 tttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgttaacatgctcaactgaatcaag 48238605  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctata 190  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  48238604 cgttggtgcgagtattcctctttcttggaaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctata 48238523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 52500653 - 52500795
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52500653 atcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaact 52500752  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  52500753 gaatcaagcgttggtgcgagtattcccctttcttggaaaaata 52500795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 137 - 255
Target Start/End: Original strand, 48233498 - 48233616
Alignment:
Q  137 aaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggatttgttgtgtccgatatgagcaaatcttcag 236  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||    
T  48233498 aaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcagcggatttgttgtgttcgatatgagtaaatcttcag 48233597  T
Q  237 gaacttctaccttcatttc 255  Q
    ||| |||||||||||||||    
T  48233598 gaatttctaccttcatttc 48233616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 18096 - 17856
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18096 tttcacccgatcggcaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactaaatcaag 17997  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    |||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17996 cgttggtgcgagtattcccctttcttg-------agcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggattt 17904  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17903 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 17856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 31917 - 32171
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| || |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  31917 atcagaattttcacccgatctacaaacagaatcagagtttaaatactctttctcttcacctggaatcagcaacatcataaattcgttaacatgctcaact 32016  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  32017 gaatcaagcgttggtgcaagtat-cccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatca 32115  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  32116 acggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttca 32171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19441 - 19670
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||    
T  19441 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgctcaact 19540  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  19541 gaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtgacatca 19640  T
Q  201 acggatttgttgtgtccgatatgagcaaat 230  Q
    || ||||||||||||||||||| |||||||    
T  19641 acagatttgttgtgtccgatatcagcaaat 19670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 321571 - 321316
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||| || |||||| ||||||||||||||||||||    
T  321571 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagcgatatcataaattcgttaacatgctcaact 321472  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  321471 gaatcaagcattggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacaaaaagtctataagtgacatca 321372  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  321371 acggatttgttttgtccgatatcagcaaatcttcaggaatttctaccttcatttca 321316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 807 - 551
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||| ||| | ||||||||||| || ||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||||    
T  807 atcagaattttcacccaatctacaaacagaatcagaggttaaatactctttcttttcacctggaatcagcgacatcataaattcattaacatgctcaact 708  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | ||||||||||||||||| |||| |||||||||    
T  707 gaatcaagcgttggtgcgagtattcccctttattggaaaaatagctggtcaccaaggttatcatttagatcgggatacacaaagtttataagtgacatca 608  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttcat 257  Q
    |||| ||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  607 acgggtttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcat 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 49171 - 48916
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| ||||||| |||| ||||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |    
T  49171 atcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctcaatt 49072  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  49071 gaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtgacatca 48972  T
Q  201 acggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||    
T  48971 acggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttca 48916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 168; Significance: 4e-90; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 182803 - 183050
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||| ||||||||| |||| |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  182803 tttcgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacttggaatcactgacatcatatattcgttaacatgctcaaccgaatcaag 182902  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggattt 208  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||| | ||||||||||||||||||| |||||||||||  |||||||||||| ||||    
T  182903 cgttggtgcgagtattcccttttcttggaaaaagagtgggtcaccaatgatatcattcaaatcgggatatacaaagtctattagtgacatcaacgaattt 183002  T
Q  209 gttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||| || ||||||||||||||||| |||| ||||||||||||||||    
T  183003 gttgtatcggatatgagcaaatcttcgggaatttctaccttcatttca 183050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 165522 - 165770
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatac-tctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaa 107  Q
    |||| ||||||||| |||| |||||| |||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  165522 tttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctcaaccgaatcaa 165621  T
Q  108 gcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggatt 207  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||  |||||||||||| |||    
T  165622 gcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgacatcaacgaatt 165721  T
Q  208 tgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    |||||| || |||||||| |||||||| |||| |||  |||||||||||    
T  165722 tgttgtatcggatatgagtaaatcttcgggaatttcccccttcatttca 165770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16668 - 16889
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||| | |||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||| ||| |||    
T  16668 atcagaattttcgctcgattgaaaaacagaatcatagcttaaaaactctttctcttcacctagaatcagtgaaatcatatatgcgttaacatactccact 16767  T
Q  101 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 200  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  16768 aaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaagttatcattcaaatcgggatacacaaagtctataagtgacatca 16867  T
Q  201 acggatttgttgtgtccgatat 222  Q
    ||||||||||||||||||||||    
T  16868 acggatttgttgtgtccgatat 16889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 28861 - 28727
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 108  Q
    |||||||| | ||| ||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28861 tttcacccaagcgacaaacagaatcagagtttaaatactttttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaag 28762  T
Q  109 cgttggtgcgagtattcccctttcttggaaaaata 143  Q
    |||||||||||||||||||||||||||||||||||    
T  28761 cgttggtgcgagtattcccctttcttggaaaaata 28727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 137 - 24
Alignment:
Q  1 atcagaagtttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 100  Q
    ||||||| |||||||||||||| | ||| ||||| |||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||    
T  137 atcagaattttcacccgatcgacatacaaaatcagagcttaaatactctttctcgccacctgaaatcagtgacatcgtatattcgttaacatgctcaact 38  T
Q  101 gaatcaagcgttgg 114  Q
    ||||||||| ||||    
T  37 gaatcaagccttgg 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 1640 - 1703
Alignment:
Q  9 tttcacccgatcgaaaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtga 72  Q
    |||||||||||||| ||||| ||||| || |||||||| |||||||||||||||||||||||||    
T  1640 tttcacccgatcgataaacataatcagagtttaaatacgctttctcttcacctggaatcagtga 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 39937 - 39995
Alignment:
Q  198 tcaacggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttca 256  Q
    ||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||    
T  39937 tcaacggatttgttgtgtccgatatcagcaaatcttcaagaatttctacctttatttca 39995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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