View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12101_high_5 (Length: 303)

Name: NF12101_high_5
Description: NF12101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12101_high_5
NF12101_high_5
[»] chr3 (4 HSPs)
chr3 (88-282)||(3936070-3936261)
chr3 (91-238)||(52103419-52103564)
chr3 (93-153)||(2190370-2190430)
chr3 (92-178)||(3936682-3936768)
[»] chr5 (2 HSPs)
chr5 (91-234)||(31607256-31607399)
chr5 (91-242)||(31607956-31608107)
[»] chr7 (2 HSPs)
chr7 (91-244)||(3306652-3306805)
chr7 (89-231)||(3305922-3306064)
[»] chr2 (6 HSPs)
chr2 (95-244)||(15975436-15975585)
chr2 (91-213)||(42149562-42149684)
chr2 (91-231)||(15974709-15974849)
chr2 (11-90)||(34666399-34666477)
chr2 (90-205)||(40321117-40321232)
chr2 (89-221)||(40320239-40320371)
[»] chr6 (4 HSPs)
chr6 (91-244)||(17439865-17440018)
chr6 (89-231)||(17440604-17440746)
chr6 (104-244)||(20666758-20666898)
chr6 (104-175)||(20667461-20667532)
[»] chr1 (5 HSPs)
chr1 (90-244)||(30430342-30430494)
chr1 (164-238)||(10468749-10468823)
chr1 (89-172)||(30429387-30429470)
chr1 (104-178)||(36139704-36139778)
chr1 (122-234)||(36140637-36140748)
[»] chr4 (3 HSPs)
chr4 (91-172)||(27340743-27340824)
chr4 (91-205)||(17869644-17869758)
chr4 (91-178)||(27339716-27339803)


Alignment Details
Target: chr3 (Bit Score: 149; Significance: 1e-78; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 88 - 282
Target Start/End: Original strand, 3936070 - 3936261
Alignment:
Q  88 gatgagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatacta 187  Q
    ||||||||||||| |||||||||||   ||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3936070 gatgagttcatctctgctccattta---ttcctccatttactcctctccaatgcatggataaatgacacatgacaaaaataaatccaagggctaatacta 3936166  T
Q  188 aaagcttaaaatagagactaattcatctgattcctctcgtcatcttcattgttgatagctgcctctctcttttcctctcaccgccggacgccggc 282  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  3936167 aaagcttaaaatagagactaattcatctgattcctctcgttatcttcattgctgatagctgcctctcccttttcctctcactgccggacgccggc 3936261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 52103564 - 52103419
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaa 190  Q
    |||||||||| ||||||||||||||||| | ||||||||||| |||||||||| ||||||||| | ||| ||||  |||||||||||| ||||| |||||    
T  52103564 gagttcatctttgctccatttaacattcctccatttactcctttccaatgcatagataaatgatatatgtcaaa--taaatccaagggttaataataaaa 52103467  T
Q  191 gcttaaaatagagactaattcatctgattcctctcgtcatcttcattg 238  Q
     |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  52103466 tcttaaaatagagactaattcatttgattcctctcatcatcttcattg 52103419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 2190370 - 2190430
Alignment:
Q  93 gttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatga 153  Q
    |||||| | ||||||||||||||||| | ||||||||||| |||||||| |||||||||||    
T  2190370 gttcatatttgctccatttaacattcctccatttactcctttccaatgcctggataaatga 2190430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 3936768 - 3936682
Alignment:
Q  92 agttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaaggg 178  Q
    ||||||||| ||||||||||||||||| | |||||| |||| || ||| ||  ||||| |||||  |||||||||  ||||||||||    
T  3936768 agttcatctttgctccatttaacattcctccatttaatcctttcgaattcacagataagtgacatgtggcaaaaaccaatccaaggg 3936682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 91 - 234
Target Start/End: Original strand, 31607256 - 31607399
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaa 190  Q
    |||||||||| ||||||||||||| ||| | ||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  31607256 gagttcatctttgctccatttaacgttcctccatttactccttttcaatgcatggataaatgacacatggaaaaaataaatccaagggctaataataaaa 31607355  T
Q  191 gcttaaaatagagactaattcatctgattcctctcgtcatcttc 234  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||    
T  31607356 gcttaaaatagagtctaattcatttgattcctctcatcatcttc 31607399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 31608107 - 31607956
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaa 190  Q
    |||||||||| ||||||||||||||||| | || ||||| || | ||||||||||||||||||||||||| |||||||||||||| || ||||| |||||    
T  31608107 gagttcatctttgctccatttaacattcctccaattacttcttttcaatgcatggataaatgacacatggaaaaaataaatccaaaggttaataataaaa 31608008  T
Q  191 gcttaaaatagagactaattcatctgattcctctcgtcatcttcattgttga 242  Q
    ||||||| ||||| ||||||||| ||||||||||| ||||||||||||||||    
T  31608007 gcttaaagtagagcctaattcatttgattcctctcatcatcttcattgttga 31607956  T

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Target: chr7 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 3306805 - 3306652
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaa 190  Q
    |||||||||| |||||||||| ||||| || ||||||||||| |||||||||||||| ||||||| ||| |||||||||||| |||||||| || |||||    
T  3306805 gagttcatctttgctccattttacatttttccatttactcctttccaatgcatggattaatgacatatgacaaaaataaatctaagggctagtaataaaa 3306706  T
Q  191 gcttaaaatagagactaattcatctgattcctctcgtcatcttcattgttgata 244  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  3306705 gcttaaaatagagattaattcatttgattcctctcatcatcttcattgttgata 3306652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 3305922 - 3306064
Alignment:
Q  89 atgagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaa 188  Q
    |||||||||||| |||||||||| |||||| | |||||||| || |||||||||||||| |||||||||| ||||||||| ||| || || ||| | |||    
T  3305922 atgagttcatctttgctccattttacattcctccatttacttctttccaatgcatggattaatgacacatagcaaaaatagatctaaaggttaagattaa 3306021  T
Q  189 aagcttaaaatagagactaattcatctgattcctctcgtcatc 231  Q
    ||  ||||||| ||||| |||| | || ||||||||| |||||    
T  3306022 aatgttaaaattgagaccaatttaacttattcctctcatcatc 3306064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 244
Target Start/End: Complemental strand, 15975585 - 15975436
Alignment:
Q  95 tcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaagctt 194  Q
    |||||| |||||||||| |||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||| || ||||| |||    
T  15975585 tcatctttgctccattttacattcctccatttactcctttccaatgcatggattaatgacacatggcaaaaataaatccaagagctagtaataaaatctt 15975486  T
Q  195 aaaatagagactaattcatctgattcctctcgtcatcttcattgttgata 244  Q
    |||||||||| ||||| || ||||||||||| |||||||||||| |||||    
T  15975485 aaaatagagattaatttatttgattcctctcatcatcttcattgctgata 15975436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 42149684 - 42149562
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaa 190  Q
    |||||||||| ||||||||||||||||| | ||||||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  42149684 gagttcatctttgctccatttaacattcctccatttactccttttcaatgcatggataaatgacatatgtcaaaaataaatccaagggctaataataaaa 42149585  T
Q  191 gcttaaaatagagactaattcat 213  Q
     ||||||||||||||||||||||    
T  42149584 tcttaaaatagagactaattcat 42149562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 15974709 - 15974849
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaa 190  Q
    |||||||||| |||||||||| |||||| ||||||||||| | | |||||||||||| |||||||||||||||||||| ||| || || ||| | |||||    
T  15974709 gagttcatctttgctccattttacattccttcatttactcattttcaatgcatggattaatgacacatggcaaaaatagatctaaaggttaagattaaaa 15974808  T
Q  191 gcttaaaatagagactaattcatctgattcctctcgtcatc 231  Q
      ||||||  ||||| |||| | || ||||||||| |||||    
T  15974809 tgttaaaactgagaccaatttaacttattcctctcatcatc 15974849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 34666477 - 34666399
Alignment:
Q  11 cagagactccgaatatcaaaagatgtgttgaaattgatcgtatttttcattaatctattttgaaaaatgcgcaagttgat 90  Q
    |||||||||||| |||||||||||| |||||||||||||||  ||| ||||||| ||||||||||||||| |||||||||    
T  34666477 cagagactccga-tatcaaaagatgcgttgaaattgatcgtgatttccattaatttattttgaaaaatgcacaagttgat 34666399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 40321232 - 40321117
Alignment:
Q  90 tgagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaa 189  Q
    ||||||||||| ||||||||||| | ||  | ||||||||||| | |||||||| |||  ||||||||||| ||||||||||||||||||| | | ||||    
T  40321232 tgagttcatctttgctccatttagccttgctccatttactccttttcaatgcatagatgcatgacacatggtaaaaataaatccaagggctgaaattaaa 40321133  T
Q  190 agcttaaaatagagac 205  Q
     | |||| ||||||||    
T  40321132 tggttaacatagagac 40321117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 221
Target Start/End: Original strand, 40320239 - 40320371
Alignment:
Q  89 atgagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaa 188  Q
    |||||||||||| ||||||||||| | ||  | |||||| |||| | |||||||| |||  ||||||||||| ||||||||||| ||||||| | | |||    
T  40320239 atgagttcatctttgctccatttagccttgctccatttaatccttttcaatgcatagatgcatgacacatggtaaaaataaatctaagggctgaaattaa 40320338  T
Q  189 aagcttaaaatagagactaattcatctgattcc 221  Q
    ||| |||| ||| | ||| || ||||| |||||    
T  40320339 aaggttaacataaacacttatccatcttattcc 40320371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 17439865 - 17440018
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaa 190  Q
    |||||||| | | |||||||| |||||| | ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | || |||||    
T  17439865 gagttcatatttactccattttacattcctccatttactcctttccaatgcatggattaatgacacatggcaaaaataaatccaagggccagtaataaaa 17439964  T
Q  191 gcttaaaatagagactaattcatctgattcctctcgtcatcttcattgttgata 244  Q
     | ||||||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  17439965 acataaaatagagattaattcatttgattcctctcatcatcttcattgctgata 17440018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 17440746 - 17440604
Alignment:
Q  89 atgagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaa 188  Q
    ||||||| |||| |||||||||| |||||| | ||||||||||| |||||||||||||| |||||||||||||||||||| ||| || || ||| | |||    
T  17440746 atgagtttatctttgctccattttacattcctccatttactcctttccaatgcatggattaatgacacatggcaaaaatagatctaaaggttaagattaa 17440647  T
Q  189 aagcttaaaatagagactaattcatctgattcctctcgtcatc 231  Q
    ||  ||||||| ||||| |||| | || ||||||||| |||||    
T  17440646 aatgttaaaattgagaccaatttaacttattcctctcatcatc 17440604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 244
Target Start/End: Original strand, 20666758 - 20666898
Alignment:
Q  104 ctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaagcttaaaatagag 203  Q
    |||||| || ||||| | ||| ||||||| |||||||||||||||||||| || ||||||| |||||||||| || | ||| |||||| |||||| ||||    
T  20666758 ctccatatagcattcctccatctactcctttccaatgcatggataaatgatacgtggcaaatataaatccaaaggttgatattaaaaggttaaaacagag 20666857  T
Q  204 actaattcatctgattcctctcgtcatcttcattgttgata 244  Q
     | | ||||||| ||||||||| |||||||| | |||||||    
T  20666858 gccatttcatctaattcctctcatcatcttcttcgttgata 20666898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 20667532 - 20667461
Alignment:
Q  104 ctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaa 175  Q
    ||||||||| ||||| | ||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||    
T  20667532 ctccatttagcattcctccatttactcctttccaatgcatggataaatgacatgtggcaaatataaatccaa 20667461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 244
Target Start/End: Complemental strand, 30430494 - 30430342
Alignment:
Q  90 tgagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaa 189  Q
    ||||||||||| |||||||||||  |||| | ||||||||||| |||||||||| |||||||||||  ||||||||||||||| ||||| ||| | ||||    
T  30430494 tgagttcatctttgctccatttagtattcctccatttactcctttccaatgcatagataaatgacatgtggcaaaaataaatcaaagggttaagattaaa 30430395  T
Q  190 agcttaaaatagagactaattcatctgattcctctcgtcatcttcattgttgata 244  Q
    || |||||||| || | | ||||  | ||||||||| |||||||| | |||||||    
T  30430394 agtttaaaatataggccatttca--taattcctctcatcatcttcttcgttgata 30430342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 10468749 - 10468823
Alignment:
Q  164 aaataaatccaagggctaatactaaaagcttaaaatagagactaattcatctgattcctctcgtcatcttcattg 238  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||| ||||||||||||    
T  10468749 aaataaatccaagggctaataataaaatcttaaaatagagactaattcagttgattcctctcatcatcttcattg 10468823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 30429387 - 30429470
Alignment:
Q  89 atgagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatc 172  Q
    |||||||||||| |||||||||||  |||| | ||||| ||||| ||||||||||||||||||||||  ||||||| |||||||    
T  30429387 atgagttcatctttgctccatttagtattcctccatttgctcctttccaatgcatggataaatgacatgtggcaaagataaatc 30429470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 36139704 - 36139778
Alignment:
Q  104 ctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaaggg 178  Q
    ||||||||| ||||| |  |||||||||| |||||| ||| ||||| |||||  ||||||||| |||||||||||    
T  36139704 ctccatttaccattcctcaatttactcctgtccaatacatagataagtgacatgtggcaaaaagaaatccaaggg 36139778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 36140748 - 36140637
Alignment:
Q  122 catttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaagcttaaaatagagactaattcatctgattcc 221  Q
    ||||||||||| |||||| |||||||||  ||||  | ||||||| ||||||||||| | | | |||||  ||||||| | ||| ||||||||| ||||     
T  36140748 catttactcctttccaatacatggataagcgacatgttgcaaaaagaaatccaagggttgagattaaaatgttaaaat-gggaccaattcatcttattct 36140650  T
Q  222 tctcgtcatcttc 234  Q
    |||| ||||||||    
T  36140649 tctcatcatcttc 36140637  T

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Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 27340824 - 27340743
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatc 172  Q
    |||||||||| |||||||||||  |||| | ||||||||||| ||||||||||||||||||||||  ||||||| |||||||    
T  27340824 gagttcatctttgctccatttagtattcctccatttactcctttccaatgcatggataaatgacatgtggcaaagataaatc 27340743  T

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Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 17869644 - 17869758
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaagggctaatactaaaa 190  Q
    |||||||||| ||||||||||| | ||  | ||||||||||| | |||||||| |||  ||||||||||| ||||||||||||||||||| | | ||||     
T  17869644 gagttcatctttgctccatttagccttgctccatttactccttttcaatgcatagatgcatgacacatggtaaaaataaatccaagggctgaaattaaat 17869743  T
Q  191 gcttaaaatagagac 205  Q
    | |||| ||||||||    
T  17869744 ggttaacatagagac 17869758  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 27339716 - 27339803
Alignment:
Q  91 gagttcatctatgctccatttaacattctttcatttactcctctccaatgcatggataaatgacacatggcaaaaataaatccaaggg 178  Q
    |||||||||| |||||||||||  |||||| ||||||||| | |||||||||| |||| |||| |  ||| ||||||||||| |||||    
T  27339716 gagttcatctttgctccatttagtattcttccatttactcatttccaatgcatagatagatgatatgtggtaaaaataaatcaaaggg 27339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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