View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12101_high_6 (Length: 241)
Name: NF12101_high_6
Description: NF12101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12101_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 8275223 - 8275437
Alignment:
| Q |
17 |
accattgtatctgacatcgtataaaatataacttagatgtgtgttgtcggaataaagaaagagaaaaaacaatatatagacataactaaaccaaaccagc |
116 |
Q |
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| T |
8275223 |
accattgtatctgacatcgtataaaatataactcagatgtgtgttgtcggaataaagaaagagaataaacaatat--agacataactaaaccaaaccagc |
8275320 |
T |
|
| Q |
117 |
caaagtaaagtaacttccctccattgagaaaaactccattttcccttattctaatcaatgaccctctaaaataaggccatgaatatccctagccacaaat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8275321 |
caaagtaaagtaacttccctccattgagaaaaactccattttcccttattctaatcaatgaccctctaaaataaggccatgaatatccctagccacaaat |
8275420 |
T |
|
| Q |
217 |
tcattcaaccttcatct |
233 |
Q |
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||||||||||||||||| |
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| T |
8275421 |
tcattcaaccttcatct |
8275437 |
T |
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