View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12117_high_13 (Length: 211)
Name: NF12117_high_13
Description: NF12117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12117_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 15303696 - 15303868
Alignment:
| Q |
22 |
catagggatcaggggtatcactaggaattatgagttctttagcacacatctaaaacaagaaaaacaaagaaaataacagtaacagtgttcgttcaaaagg |
121 |
Q |
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| T |
15303696 |
catagggatcaggggtatcactaggaattatgagttctttagcacacatctaagacaagaaaaacaaagaaaataacagtgttagt-ttagttcaaaagg |
15303794 |
T |
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| Q |
122 |
aaaagaatgcaacaattgaagcatataaccagaagtgatatatatacgtacccctaaaccgtataagcattcag |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
15303795 |
aaaagaatgcaacaattgaagcatataaccagaagtgatatatatacgtacccctaaatcgtataagcattcag |
15303868 |
T |
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