View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12118_low_4 (Length: 297)
Name: NF12118_low_4
Description: NF12118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12118_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 12 - 279
Target Start/End: Complemental strand, 45415198 - 45414931
Alignment:
| Q |
12 |
aacctgtggcggcggaagtagagaggtcgcaacctctgagctcaagaaccttcaacctcccaaaaggcaagaaagacaatggagtgggatccctaactgg |
111 |
Q |
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| T |
45415198 |
aacctttggcggcggaagtagagaggtcgcaacctctgagctcaagaaccttcaacctcccaaaaggcaagaaagacaatggagtgggatccctaactgg |
45415099 |
T |
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| Q |
112 |
aggttgcaagacagaaacaaccttgagggaagtgagaagacgaaggatcctacggagttgctcgagtgcacggtgatcaccgaggtcggagacgtaggcg |
211 |
Q |
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| T |
45415098 |
aggttgcaagacagaaacaaccttgagggaagtgagaagacgaaggatcctacggagttgctcgagtgcacggtgatcaccgaggtcggagacgtaggca |
45414999 |
T |
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| Q |
212 |
cgaagataatcgacgggggcaccgagaaggagactctcaagctcgtgaagggattcgagccttgattg |
279 |
Q |
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| T |
45414998 |
cgaagataatcgacgggggcaccgagaaggagactctcaagctcgtgaagggattcgagccttgattg |
45414931 |
T |
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