View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12120_low_6 (Length: 357)
Name: NF12120_low_6
Description: NF12120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12120_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 9 - 343
Target Start/End: Original strand, 25209027 - 25209360
Alignment:
| Q |
9 |
aacctgtgtcacacccaagaatgatttctgattagaatcaaaagcatctttagttgaaatagtcatatatccagatgaagctactggatccataacattg |
108 |
Q |
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| T |
25209027 |
aacctgtgtcacacccaagaatgatttctgattagaatcaaaagcatctttagttgaaatagtcatatatccagatgaagctactggatccataacattg |
25209126 |
T |
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| Q |
109 |
tttcttgacctatcttcatgagtgttattcttgaatgacatgaattgaggaaggtttgaaaccttatttgaaaatgaccactgcattcctgaactcctaa |
208 |
Q |
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| T |
25209127 |
tttcttgacctatcttcatgagtgttattcttgaatgacatgaattgaggaaggtttgaaaccttatttgaaaatgaccactgcattcctgaactcctaa |
25209226 |
T |
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| Q |
209 |
ctgcatcaaatttaagaacataatttatgttagcaactaaatcaacattnnnnnnnnnnnnnnnnctttgaaataacaagtttggatcgatttaaaatac |
308 |
Q |
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| T |
25209227 |
ctgcatcaaatttaagaacataatttatgttaacacctaaatcaacatttaaaaaaaaaaaaata-tttgaaataacaagtttggatcgatttaaaatac |
25209325 |
T |
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| Q |
309 |
ctttttaaactaagaaaaagcacaatgatgattat |
343 |
Q |
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|||||||||| |||||||||||||||||||||||| |
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| T |
25209326 |
ctttttaaacaaagaaaaagcacaatgatgattat |
25209360 |
T |
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