View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12121_high_13 (Length: 224)
Name: NF12121_high_13
Description: NF12121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12121_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 29093153 - 29093351
Alignment:
| Q |
18 |
gtaaccagctgcaatgcacaaaacaatgacttaataataa-ag--gtg----ggtttccatcaaatgagttcagttctgcaagccatcgccacaaaaaac |
110 |
Q |
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| T |
29093153 |
gtaaccagctgcaatgcacaaaataatgacttaataataagagtagtgatatggtttccatcaaatgagttcagttctgcaagccatcgccacaaaaaac |
29093252 |
T |
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| Q |
111 |
aaagatatctgttatattttgatcaatggtcacgattttagttgtgcata---tttcaaaaacggatataggagccaactatcgtcctttccatcctct |
206 |
Q |
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| T |
29093253 |
aaagatatctgttatattttgatcaatggtcacgattttagttgtgcatatggtttcaaaaacggatataggagccaactatcgtcctttccatcctct |
29093351 |
T |
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