View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12121_low_16 (Length: 248)
Name: NF12121_low_16
Description: NF12121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12121_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 14926473 - 14926611
Alignment:
| Q |
18 |
aatattgatttggattctcaactcctcaaaaaagtgaaggttagactcaaattatcaattaaatcttcaatttttctgcgttttttcaaactgaatttcc |
117 |
Q |
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| T |
14926473 |
aatattgatttggattctcaactcctcaaaaaagtgaaggttagactcaaattatcaattaaatcttcaatttttctgcgttttttcaaactgaatttcc |
14926572 |
T |
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| Q |
118 |
ttgatattcttgatgattacctttaagtttggtcgcaac |
156 |
Q |
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| T |
14926573 |
ttgatattcttgatgattacctttaagtttggtcgcaac |
14926611 |
T |
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