View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12122_high_7 (Length: 251)

Name: NF12122_high_7
Description: NF12122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12122_high_7
NF12122_high_7
[»] chr4 (16 HSPs)
chr4 (161-230)||(4622798-4622867)
chr4 (9-87)||(4622644-4622724)
chr4 (160-224)||(4634246-4634311)
chr4 (160-224)||(9661816-9661881)
chr4 (160-224)||(1657656-1657721)
chr4 (160-224)||(16991835-16991900)
chr4 (160-230)||(11817029-11817100)
chr4 (161-200)||(44021652-44021691)
chr4 (159-202)||(46729004-46729047)
chr4 (160-202)||(41486561-41486603)
chr4 (163-219)||(14542601-14542658)
chr4 (160-224)||(28588524-28588589)
chr4 (162-224)||(54420800-54420863)
chr4 (160-202)||(3673609-3673651)
chr4 (163-196)||(4959664-4959697)
chr4 (159-199)||(18935648-18935688)
[»] chr5 (11 HSPs)
chr5 (160-224)||(31645792-31645857)
chr5 (160-224)||(34894002-34894067)
chr5 (160-230)||(6887264-6887335)
chr5 (160-224)||(28618567-28618632)
chr5 (160-201)||(29310435-29310476)
chr5 (160-203)||(33486656-33486699)
chr5 (160-202)||(41554472-41554514)
chr5 (164-230)||(41988141-41988208)
chr5 (160-202)||(19646127-19646169)
chr5 (158-195)||(2415393-2415430)
chr5 (162-202)||(37424979-37425019)
[»] chr7 (18 HSPs)
chr7 (160-221)||(40775233-40775295)
chr7 (160-203)||(28015341-28015384)
chr7 (162-229)||(41748589-41748657)
chr7 (160-202)||(24045318-24045360)
chr7 (160-202)||(47749720-47749762)
chr7 (161-202)||(16263373-16263414)
chr7 (160-224)||(24470358-24470423)
chr7 (160-224)||(24475306-24475371)
chr7 (163-196)||(47156388-47156421)
chr7 (162-202)||(23732481-23732521)
chr7 (160-199)||(30992909-30992948)
chr7 (160-221)||(38649444-38649506)
chr7 (163-196)||(25855309-25855342)
chr7 (163-224)||(43483558-43483619)
chr7 (160-224)||(49166890-49166955)
chr7 (160-231)||(14734136-14734208)
chr7 (175-230)||(23177683-23177739)
chr7 (158-202)||(35141837-35141881)
[»] chr2 (26 HSPs)
chr2 (160-221)||(6089859-6089921)
chr2 (160-224)||(3390395-3390460)
chr2 (160-224)||(25771408-25771473)
chr2 (161-230)||(3464916-3464986)
chr2 (160-230)||(27024225-27024296)
chr2 (160-230)||(40125346-40125417)
chr2 (161-230)||(25237413-25237483)
chr2 (173-230)||(31263053-31263111)
chr2 (160-202)||(37883639-37883681)
chr2 (160-224)||(10589001-10589066)
chr2 (162-203)||(15674062-15674103)
chr2 (160-224)||(25516457-25516522)
chr2 (160-224)||(41176825-41176890)
chr2 (160-224)||(44167795-44167860)
chr2 (160-199)||(7640442-7640481)
chr2 (160-203)||(16880045-16880088)
chr2 (160-202)||(26491289-26491331)
chr2 (159-224)||(43566840-43566905)
chr2 (160-224)||(3602948-3603013)
chr2 (163-196)||(9715634-9715667)
chr2 (162-203)||(17037737-17037778)
chr2 (160-224)||(25623131-25623196)
chr2 (160-224)||(27191421-27191486)
chr2 (160-224)||(27841235-27841300)
chr2 (161-202)||(42105839-42105880)
chr2 (18-87)||(41842047-41842118)
[»] chr1 (13 HSPs)
chr1 (163-224)||(27469821-27469883)
chr1 (160-224)||(22344998-22345063)
chr1 (158-203)||(52839408-52839453)
chr1 (162-224)||(6212974-6213037)
chr1 (161-203)||(44514077-44514119)
chr1 (160-231)||(13691844-13691917)
chr1 (160-224)||(30853869-30853934)
chr1 (158-202)||(52839507-52839551)
chr1 (160-230)||(38646541-38646612)
chr1 (173-230)||(14717341-14717399)
chr1 (160-201)||(5832220-5832261)
chr1 (160-224)||(33703595-33703660)
chr1 (160-196)||(44562835-44562871)
[»] chr3 (13 HSPs)
chr3 (160-224)||(1165482-1165547)
chr3 (160-224)||(20201144-20201209)
chr3 (160-224)||(20203326-20203391)
chr3 (160-202)||(22844037-22844079)
chr3 (160-221)||(50460160-50460222)
chr3 (160-224)||(41882494-41882559)
chr3 (160-224)||(42106074-42106139)
chr3 (160-224)||(43029646-43029711)
chr3 (160-224)||(50519753-50519818)
chr3 (160-230)||(1220301-1220372)
chr3 (160-218)||(1806546-1806605)
chr3 (159-224)||(43839602-43839667)
chr3 (160-224)||(22286835-22286900)
[»] chr8 (12 HSPs)
chr8 (160-224)||(31874047-31874112)
chr8 (161-224)||(13864322-13864386)
chr8 (160-230)||(9269978-9270049)
chr8 (163-202)||(16937428-16937467)
chr8 (160-230)||(23766699-23766770)
chr8 (160-202)||(10042747-10042789)
chr8 (163-219)||(44295284-44295341)
chr8 (160-221)||(9992631-9992693)
chr8 (164-202)||(27534489-27534527)
chr8 (160-202)||(37658952-37658994)
chr8 (160-224)||(36545867-36545932)
chr8 (176-220)||(39067816-39067860)
[»] chr6 (8 HSPs)
chr6 (160-230)||(32457603-32457674)
chr6 (160-224)||(16913291-16913356)
chr6 (160-199)||(19759777-19759816)
chr6 (162-224)||(33194568-33194631)
chr6 (160-202)||(12576564-12576606)
chr6 (160-201)||(32804281-32804322)
chr6 (163-223)||(34020582-34020643)
chr6 (160-200)||(548951-548991)
[»] scaffold0045 (1 HSPs)
scaffold0045 (162-224)||(9736-9799)


Alignment Details
Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 4622798 - 4622867
Alignment:
Q  161 ggtgattttggatcaaaaattgaccttaaatcacccctctttattgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4622798 ggtgattttggatcaaaaattgaccttaaatcacccctctttattgatgaagaagaagaaactagagttt 4622867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 4622644 - 4622724
Alignment:
Q  9 acctgtgcaaaacatgaaagacagacagcgccacaca--gacgacaaacacacccacgtcgcactaggacgacgaaatcac 87  Q
    ||||| |||||||| |||||||| |||||||||||||  |||||||||||| |||||||||||||| ||||||||||||||    
T  4622644 acctgagcaaaacaagaaagacaaacagcgccacacaaagacgacaaacactcccacgtcgcactaagacgacgaaatcac 4622724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 4634311 - 4634246
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  4634311 gggtgattttgggtcaaaaattgaccttaaatcacccctctttgatggatgaaggagaagaaacta 4634246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 9661881 - 9661816
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  9661881 gggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaacta 9661816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 1657656 - 1657721
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| || ||||||| |||||||||||    
T  1657656 gggtgattttgggtcaaaaattgaccctaaatcacctctctttgatggatgaaggagaagaaacta 1657721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 16991900 - 16991835
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| || ||||||| |||||||||||    
T  16991900 gggtgattttgggtcaaaaattgaccctaaatcaccgctctttgatggatgaaggagaagaaacta 16991835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 11817100 - 11817029
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||| |||||| || ||| |||| ||||||||||| || |||||||||||||||| ||||||||    
T  11817100 gggtgattttgggtcaaaacttaaccctaaaccacccctctttgatggatgaagaagaagaaattaaagttt 11817029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 44021652 - 44021691
Alignment:
Q  161 ggtgattttggatcaaaaattgaccttaaatcacccctct 200  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  44021652 ggtgattttggatcaaaaattgaccttaaaccacccctct 44021691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 46729004 - 46729047
Alignment:
Q  159 agggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||    
T  46729004 agggtgattttgggtcaaaaattgaccctaaatcacccctcttt 46729047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 41486603 - 41486561
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  41486603 gggtgattttggatcaaaaattgaccctaaataacccctcttt 41486561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 14542601 - 14542658
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaaga 219  Q
    ||||||||| ||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  14542601 tgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaaga 14542658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 28588589 - 28588524
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctct-ttattgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| |||||||||| ||| | || ||||||| |||||||||||    
T  28588589 gggtgattttgggtcaaaaattgaccctaaatcacccttctatgatggatgaaggagaagaaacta 28588524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 54420800 - 54420863
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||| ||||||||||||| |||||||||| |||||  | ||||||| |||||||||||    
T  54420800 gtgattttgggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaacta 54420863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 3673651 - 3673609
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  3673651 gggtgatttggggtcaaaaattgaccctaaatcacccctcttt 3673609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 4959664 - 4959697
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcaccc 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  4959664 tgattttggatcaaaaattgaccctaaatcaccc 4959697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 18935688 - 18935648
Alignment:
Q  159 agggtgattttggatcaaaaattgaccttaaatcacccctc 199  Q
    ||||||||| | | |||||||||||||||||||||||||||    
T  18935688 agggtgattctaggtcaaaaattgaccttaaatcacccctc 18935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 31645857 - 31645792
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  31645857 gggtgattttggatcaaaaattgaccctaaatcacccctctttaatggatgaaggagaagaaacta 31645792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 34894002 - 34894067
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  34894002 gggtgattttgggtcaaaaattgaccgtaaatcacccctctttgatggatgaaggagaagaaacta 34894067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 6887264 - 6887335
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||| | ||||||||||| |||||||||||||||| || ||||||| ||||||||||| |||||    
T  6887264 gggtgattttgggttaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaactagagttt 6887335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 28618632 - 28618567
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| | ||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  28618632 gggtgattttgggttaaaaattgaccttaaatcacccctctttggctgatgaaggagaagaaacta 28618567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 29310435 - 29310476
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctctt 201  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  29310435 gggtgattttggatcaaaaattgaccctaaatcacccctctt 29310476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 33486656 - 33486699
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttta 203  Q
    |||||||||||| ||||||||||||| |||||||||||||||||    
T  33486656 gggtgattttgggtcaaaaattgaccctaaatcacccctcttta 33486699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 41554514 - 41554472
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  41554514 gggtgattttggatcaaaaattgatcctaaatcacccctcttt 41554472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 41988208 - 41988141
Alignment:
Q  164 gattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    ||||||| |||||||||||| | |||||||||||||||| || | ||||| ||||||||||| |||||    
T  41988208 gattttgaatcaaaaattgatcctaaatcacccctctttgataggtgaaggagaagaaactagagttt 41988141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 19646127 - 19646169
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||| ||||| |||||||||||| |||||||||||    
T  19646127 gggtgattttgggtcaaacattgaccttaaaccacccctcttt 19646169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 2415430 - 2415393
Alignment:
Q  158 aagggtgattttggatcaaaaattgaccttaaatcacc 195  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  2415430 aagggtgattttgggtcaaaaattgaccctaaatcacc 2415393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 37425019 - 37424979
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||| ||| ||||||||| ||||||||||||||||    
T  37425019 gtgattttgggtcagaaattgaccataaatcacccctcttt 37424979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 40775295 - 40775233
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaa 221  Q
    |||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||    
T  40775295 gggtgattttggatcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaa 40775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 28015384 - 28015341
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttta 203  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  28015384 gggtgattttggatcaaaaattgaccctaaatcacccctcttta 28015341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 41748589 - 41748657
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctctttattg-atgaagaagaagaaactaaagtt 229  Q
    |||||||||||||||||||||||| ||||||||  ||||||| || ||||||| |||||||||| ||||    
T  41748589 gtgattttggatcaaaaattgaccgtaaatcacatctctttagtgaatgaagatgaagaaactagagtt 41748657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 24045318 - 24045360
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  24045318 gggtgattttgggtcaaaaattgaccttaaatcaccactcttt 24045360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 47749762 - 47749720
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  47749762 gggtgattttgggtcaaaaattgaccataaatcacccctcttt 47749720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 16263414 - 16263373
Alignment:
Q  161 ggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  16263414 ggtgattttggatcaaaaattgatcctaaatcacccctcttt 16263373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 24470423 - 24470358
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| |||||||||| || ||||||||||||||||  | ||||||| |||||||||||    
T  24470423 gggtgattttgggtcaaaaattgcccctaaatcacccctctttggtggatgaaggagaagaaacta 24470358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 24475371 - 24475306
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| |||||||||| || ||||||||||||||||  | ||||||| |||||||||||    
T  24475371 gggtgattttgggtcaaaaattgcccctaaatcacccctctttggtggatgaaggagaagaaacta 24475306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 47156421 - 47156388
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcaccc 196  Q
    ||||||||||||||||||||||||||||||||||    
T  47156421 tgattttggatcaaaaattgaccttaaatcaccc 47156388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 23732481 - 23732521
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  23732481 gtgattttgagtcaaaaattgaccttaaatcacccctcttt 23732521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 30992909 - 30992948
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctc 199  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  30992909 gggtgattttgggtcaaaaattaaccttaaatcacccctc 30992948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 38649444 - 38649506
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttta-ttgatgaagaagaagaaa 221  Q
    |||||||||||| ||||||||||||  |||||||||||| |||| |||||||||  |||||||    
T  38649444 gggtgattttgggtcaaaaattgactctaaatcacccctttttagttgatgaaggtgaagaaa 38649506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 25855309 - 25855342
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcaccc 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  25855309 tgattttggatcaaaaattgaccctaaatcaccc 25855342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 43483619 - 43483558
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcacccctctttattgatgaagaagaagaaacta 224  Q
    ||||||| ||||||||||||||| |||||||| ||||||  | |||||||| | ||||||||    
T  43483619 tgattttagatcaaaaattgaccctaaatcactcctcttagtggatgaagatgcagaaacta 43483558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 49166955 - 49166890
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||| | ||||||||||||| |||||||||| |||||  | ||||||| |||||||||||    
T  49166955 gggtgattttaggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaacta 49166890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 14734136 - 14734208
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagtttc 231  Q
    ||||||||| || ||||||||||||| |||| ||||| ||||| || |||||||||||| ||| || ||||||    
T  14734136 gggtgatttggggtcaaaaattgaccctaaaccacccttctttgatggatgaagaagaaaaaattagagtttc 14734208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 23177683 - 23177739
Alignment:
Q  175 aaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||||||||||| | ||||| || ||||||| ||||||||||| |||||    
T  23177683 aaaaattgaccttaaatcactcatctttaatggatgaaggagaagaaactagagttt 23177739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 35141837 - 35141881
Alignment:
Q  158 aagggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||| | ||||||||||||| |||||||||| |||||    
T  35141837 aagggtgatttttggtcaaaaattgaccctaaatcacccttcttt 35141881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 6089921 - 6089859
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaa 221  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  6089921 gggtgattttgggtcaaaaattgaccttaaatcacccctctttgatggatgaaggagaagaaa 6089859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 3390460 - 3390395
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  3390460 gggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaacta 3390395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 25771473 - 25771408
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  25771473 gggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaacta 25771408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 3464986 - 3464916
Alignment:
Q  161 ggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| || |||||    
T  3464986 ggtgattttggatcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaattagagttt 3464916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 27024225 - 27024296
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||| ||||||| ||||| |||||||||| ||||| || ||||||| ||||||||||| |||||    
T  27024225 gggtgattttgggtcaaaaaatgaccctaaatcacccatctttgatggatgaaggagaagaaactagagttt 27024296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 40125417 - 40125346
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||  | ||||||| |||||||||||| ||||    
T  40125417 gggtgattttgggtcaaaaattaaccctaaatcacccctctttggtggatgaaggagaagaaactaaggttt 40125346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 25237413 - 25237483
Alignment:
Q  161 ggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||||||||| |||||  |||||||||||||||| || ||||||| |||| |||||| |||||    
T  25237413 ggtgattttggatcaaaagttgactctaaatcacccctctttaatagatgaaggagaataaactagagttt 25237483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 31263053 - 31263111
Alignment:
Q  173 tcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    ||||| ||||||| |||||||||||||||| || |||||||||||| ||||||||||||    
T  31263053 tcaaagattgaccctaaatcacccctctttgatggatgaagaagaaaaaactaaagttt 31263111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 37883681 - 37883639
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  37883681 gggtgattttggattaaaaattgaccctaaatcacccctcttt 37883639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 10589066 - 10589001
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| |||||||||||| |||  | |||||||| ||||||||||    
T  10589066 gggtgattttgggtcaaaaattgaccctaaatcacccctttttggtggatgaagatgaagaaacta 10589001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 15674062 - 15674103
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctcttta 203  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  15674062 gtgattttgggtcaaaaattgaccctaaatcacccctcttta 15674103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 25516522 - 25516457
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  25516522 gggtgattttgggtcaaatattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 25516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 41176890 - 41176825
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  41176890 gggtggttttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 41176825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 44167795 - 44167860
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| || |||||||||||||  | ||||||| |||||||||||    
T  44167795 gggtgattttgggtcaaaaattgaccatatatcacccctctttggtggatgaaggagaagaaacta 44167860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 7640442 - 7640481
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctc 199  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  7640442 gggtgattttgggtcaaaaattgaccctaaatcacccctc 7640481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 16880045 - 16880088
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttta 203  Q
    |||||||||||| |||||||||||||  ||||||||||||||||    
T  16880045 gggtgattttgggtcaaaaattgaccaaaaatcacccctcttta 16880088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 26491331 - 26491289
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  26491331 gggtgattttgggtcaaaaattgaacttaaattacccctcttt 26491289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 43566905 - 43566840
Alignment:
Q  159 agggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||  | ||||||| |||||||||||    
T  43566905 agggtgattttgggtcaaaaattgaccct-aatcacccctctttggtggatgaaggagaagaaacta 43566840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 3603013 - 3602948
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||  |||||| |||||| |||||||||| ||||| || ||||||| |||||||||||    
T  3603013 gggtgattttgagtcaaaagttgaccataaatcacccatctttgatggatgaaggagaagaaacta 3602948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 9715634 - 9715667
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcaccc 196  Q
    ||||||||||||||||||||||| ||||||||||    
T  9715634 tgattttggatcaaaaattgaccctaaatcaccc 9715667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 17037737 - 17037778
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctcttta 203  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  17037737 gtgattttgggtcaaaaattgaccaaaaatcacccctcttta 17037778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 25623131 - 25623196
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| |||||||||||   |||||||||||||||| ||  |||||||| |||||||||    
T  25623131 gggtgattttgggtcaaaaattgataataaatcacccctctttgatgtatgaagaaaaagaaacta 25623196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 27191421 - 27191486
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    ||||||||| || ||||||||||||| ||||||| ||||||||  | ||||||| |||||||||||    
T  27191421 gggtgatttagggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaacta 27191486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 27841235 - 27841300
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    ||||||||| || ||||||||||||| ||||||| ||||||||  | ||||||| |||||||||||    
T  27841235 gggtgatttagggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaacta 27841300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 42105839 - 42105880
Alignment:
Q  161 ggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  42105839 ggtgattttgggtcaaaaattgaccctaaagcacccctcttt 42105880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 41842118 - 41842047
Alignment:
Q  18 aaacatgaaagacagacagcgc--cacacagacgacaaacacacccacgtcgcactaggacgacgaaatcac 87  Q
    ||||| |||||||| ||| |||  |||| ||||||| |||| ||| ||||||||||| ||||||||||||||    
T  41842118 aaacaagaaagacaaacaacgcagcacaaagacgacgaacaaaccaacgtcgcactaagacgacgaaatcac 41842047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 27469821 - 27469883
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    ||||||||| || ||||||||||||||||||||||||||| || |||||||||||||||||||    
T  27469821 tgattttggttcgaaaattgaccttaaatcacccctctttaatggatgaagaagaagaaacta 27469883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 22344998 - 22345063
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||| | |||||||||||||||| || ||||||| |||||||||||    
T  22344998 gggtgattttgggtcaaaaattgaacctaaatcacccctctttgatggatgaaggagaagaaacta 22345063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 52839453 - 52839408
Alignment:
Q  158 aagggtgattttggatcaaaaattgaccttaaatcacccctcttta 203  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||    
T  52839453 aagggtgattttgggtcaaaaattgaccctaaatcacccctcttta 52839408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 6212974 - 6213037
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||| ||||||||||||| |||||||||||||||| || || |||| |||||||||||    
T  6212974 gtgattttgggtcaaaaattgaccataaatcacccctctttgatggacgaaggagaagaaacta 6213037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 44514077 - 44514119
Alignment:
Q  161 ggtgattttggatcaaaaattgaccttaaatcacccctcttta 203  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  44514077 ggtgattttgggtcaaaaattgaccctaaatcacccctcttta 44514119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 13691844 - 13691917
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatca-cccctcttta-ttgatgaagaagaagaaactaaagtttc 231  Q
    |||||||||||| ||||||||||||| |||| || |||||||||| | |||||||||||||||| ||| |||||    
T  13691844 gggtgattttgggtcaaaaattgaccctaaaccaccccctctttagtggatgaagaagaagaaattaaggtttc 13691917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 30853869 - 30853934
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||||| |||||| |||||||  | ||||||| |||||||||||    
T  30853869 gggtgattttgggtcaaaaattgaccttgaatcacacctctttggtggatgaaggagaagaaacta 30853934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 52839551 - 52839507
Alignment:
Q  158 aagggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||    
T  52839551 aagggtgattttgggtcaaaaattgatcataaatcacccctcttt 52839507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 38646612 - 38646541
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||| ||||||||||||| |||||||| ||||||| || ||||||| |||| ||| || |||||    
T  38646612 gggtgattttgggtcaaaaattgaccataaatcactcctctttgatagatgaaggagaaaaaattagagttt 38646541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 14717341 - 14717399
Alignment:
Q  173 tcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    ||||||||||||| ||||||||||||||||  | ||||||| ||||||||||| |||||    
T  14717341 tcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaactagagttt 14717399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 5832261 - 5832220
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctctt 201  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  5832261 gggtgatttagggtcaaaaattgaccctaaatcacccctctt 5832220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 33703595 - 33703660
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttta-ttgatgaagaagaagaaacta 224  Q
    |||||||||||| | ||||||||||| ||||||| ||||||||| | ||||||| |||| ||||||    
T  33703595 gggtgattttgggtaaaaaattgaccataaatcatccctctttagtggatgaaggagaaaaaacta 33703660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 44562835 - 44562871
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcaccc 196  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  44562835 gggtgattttgggtcaaaaattgaccctaaatcaccc 44562871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 1165482 - 1165547
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  1165482 gggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaacta 1165547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 20201144 - 20201209
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  20201144 gggtgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 20201209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 20203326 - 20203391
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  20203326 gggtgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 20203391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 22844079 - 22844037
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  22844079 gggtgattttgggtcaaaaattgaccttaaatcagccctcttt 22844037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 50460222 - 50460160
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaa 221  Q
    ||||||||||   ||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  50460222 gggtgattttatgtcaaaaattgaccttaaatcatccctctttgatggatgaagaagaagaaa 50460160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 41882494 - 41882559
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||| || ||||||| |||||||||||    
T  41882494 gggtaattttgggtcaaaaattgaccctaaatcactcctctttgatggatgaaggagaagaaacta 41882559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 42106139 - 42106074
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||| | ||||||||||||| ||||||||||||||||  | |||||||| ||||||||||    
T  42106139 gggtgattttaggtcaaaaattgaccctaaatcacccctctttggtggatgaagatgaagaaacta 42106074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 43029711 - 43029646
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||| ||| | |||||||||||||||| || ||||||| |||||||||||    
T  43029711 gggtgattttgggtcaaaaaatgatcctaaatcacccctctttgatggatgaaggagaagaaacta 43029646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 50519818 - 50519753
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| |||||||||| |||||  | ||||||| |||||||||||    
T  50519818 gggtgattttgggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaacta 50519753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 1220301 - 1220372
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    ||||||||||| |||||||||||| | |||||||||||||||| || | ||||| |||||||| || |||||    
T  1220301 gggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggtgaaggagaagaaattagagttt 1220372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 1806546 - 1806605
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaag 218  Q
    ||||||||| |||||||||||||||| |||| |||||||||||  | |||||||||||||    
T  1806546 gggtgatttgggatcaaaaattgaccctaaaccacccctctttggtggatgaagaagaag 1806605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 43839602 - 43839667
Alignment:
Q  159 agggtgattttggatcaaaaattgaccttaaatcacccctctttattg-atgaagaagaagaaacta 224  Q
    ||||||| ||||| ||||||||||||| |||||||||| |||||| || |||||| |||||||||||    
T  43839602 agggtgactttgg-tcaaaaattgaccctaaatcacccatctttagtgaatgaaggagaagaaacta 43839667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 22286835 - 22286900
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||| ||||| | ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  22286835 gggtaattttaggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 22286900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 31874112 - 31874047
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| || ||||||| |||||||||||    
T  31874112 gggtgattttgggtcaaaaattgaccctaaatcacctctctttgatggatgaaggagaagaaacta 31874047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 13864386 - 13864322
Alignment:
Q  161 ggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||  |||||| |||||||||||    
T  13864386 ggtgattttggctcaaaagttgaccttaaatcacccctctttgataaatgaaggagaagaaacta 13864322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 9270049 - 9269978
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||| ||||||||||| | ||||||||||||||||  | ||||||| ||||||||||| |||||    
T  9270049 gggtgattttgggtcaaaaattgatcataaatcacccctctttggtggatgaaggagaagaaactagagttt 9269978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 16937428 - 16937467
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  16937428 tgattttggatcaaaaattgaccctaaatcacccctcttt 16937467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 23766770 - 23766699
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||| ||||||||||||||||||||||  ||||||  | ||||||| ||||||||||| |||||    
T  23766770 gggtgattttgggtcaaaaattgaccttaaatcacatctctttggtggatgaagtagaagaaactagagttt 23766699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 10042789 - 10042747
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  10042789 gggtgattttgggtcaaaaattgaccataaatcacccctcttt 10042747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 44295341 - 44295284
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaaga 219  Q
    ||||||||| ||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  44295341 tgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaaga 44295284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 9992693 - 9992631
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctctttattg-atgaagaagaagaaa 221  Q
    |||||||||||| ||||||||||||| ||||||||||| || || || |||||| ||||||||    
T  9992693 gggtgattttgggtcaaaaattgaccctaaatcacccccctctaatgaatgaaggagaagaaa 9992631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 27534489 - 27534527
Alignment:
Q  164 gattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  27534489 gatttgggatcaaaaattgaccctaaatcacccctcttt 27534527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 37658994 - 37658952
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  37658994 gggtgattttgtgtcaaaaattgaccctaaatcacccctcttt 37658952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 36545867 - 36545932
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    ||||||| |||| ||| ||||||||||||||||| ||||||||  | ||||||| |||||||||||    
T  36545867 gggtgatattgggtcacaaattgaccttaaatcatccctctttggtggatgaaggagaagaaacta 36545932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 39067816 - 39067860
Alignment:
Q  176 aaaattgaccttaaatcacccctctttattgatgaagaagaagaa 220  Q
    |||||||||||||||||||||||||| |  || ||||||||||||    
T  39067816 aaaattgaccttaaatcacccctcttaaaagaagaagaagaagaa 39067860  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 32457674 - 32457603
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttta-ttgatgaagaagaagaaactaaagttt 230  Q
    |||||||||||| ||||||||||||  ||||||||||||||||| | ||||||| |||| ||||||| ||||    
T  32457674 gggtgattttgggtcaaaaattgacgctaaatcacccctctttagtagatgaaggagaaaaaactaaggttt 32457603  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 16913356 - 16913291
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    ||||||||| || ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  16913356 gggtgatttcgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 16913291  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 19759816 - 19759777
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctc 199  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  19759816 gggtgattttgggtcaaaaattgaccctaaatcacccctc 19759777  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 33194631 - 33194568
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctctt-tattgatgaagaagaagaaacta 224  Q
    |||||||||||||||||||||||| |||||||||  | ||  || |||||||||||||||||||    
T  33194631 gtgattttggatcaaaaattgaccctaaatcaccaatattgaatggatgaagaagaagaaacta 33194568  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 12576564 - 12576606
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 202  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  12576564 gggtgatttagggtcaaaaattgaccctaaatcacccctcttt 12576606  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 32804322 - 32804281
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctctt 201  Q
    |||||||||||| ||||||||||||| |||||||||| ||||    
T  32804322 gggtgattttgggtcaaaaattgaccctaaatcacccatctt 32804281  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 34020643 - 34020582
Alignment:
Q  163 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaact 223  Q
    |||| |||| ||||||||||||| |||| |||||||||||  | ||||||||||||||||||    
T  34020643 tgatgttgggtcaaaaattgaccctaaaccacccctctttggtagatgaagaagaagaaact 34020582  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 548951 - 548991
Alignment:
Q  160 gggtgattttggatcaaaaattgaccttaaatcacccctct 200  Q
    |||||||||||| |||||||||||||||| ||||| |||||    
T  548951 gggtgattttgggtcaaaaattgaccttatatcactcctct 548991  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 9736 - 9799
Alignment:
Q  162 gtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 224  Q
    |||||||||| ||||||||||||| ||||||| ||||||||  | ||||||| |||||||||||    
T  9736 gtgattttgggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaacta 9799  T

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