View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12124_low_7 (Length: 232)
Name: NF12124_low_7
Description: NF12124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12124_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 44262160 - 44262356
Alignment:
| Q |
19 |
caagctcctcgggatggatgcatttaaggttgtaagtatccttgaccttccaatagtgaaattattgcttatctaaaaaatgttcagtgtggtgagattt |
118 |
Q |
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| T |
44262160 |
caagctccttgggatggatgcatttaaggttgtaagtatccctgaccttccaatagtgaaattattgcttatctaaaaaatgttcagtgtggtgagattt |
44262259 |
T |
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| Q |
119 |
tccatggattttgacaatggtgatgaaaaagtgttgcaacataagctaagagaggttagactttaaagtgtttctatatcattggatattgtaccac |
215 |
Q |
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| T |
44262260 |
tccatggattttgacaatggtgatgaaaaagtgttgcaacagaagctaagagaggttagactttaaagtgtttctatatcattggatattgaaccac |
44262356 |
T |
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