View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12125_high_41 (Length: 288)
Name: NF12125_high_41
Description: NF12125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12125_high_41 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 20 - 281
Target Start/End: Original strand, 32227433 - 32227693
Alignment:
| Q |
20 |
actaggaaggtgggttcctccattttggtactgagaaagatgaaagtgtgnnnnnnngttctttttgtggttgtcatgacaatgggaggaattgtgtaga |
119 |
Q |
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| T |
32227433 |
actaggaaggtgggttcctccattttggtactaagaaagatgaaagtgtgtttttttgttctttttgtggttgtcatgacaatgggaggaattgtgtaga |
32227532 |
T |
|
| Q |
120 |
ataaaagagtagtcagtggacatgtttttgtgttcctctctcttgaactaaggttgggactgctctacgatgtattgtttataatttttggtggataaca |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32227533 |
ataaaagagtagtcagtggacatgtttttgtgttcctctctcttgaac-aaggttgggactgctctacgatgtattgtttataatttttggtggataaca |
32227631 |
T |
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| Q |
220 |
tctacataaattatcttgaatgtttcagtatagatcgtttgatgttaaagttcatttctctg |
281 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
32227632 |
tctacataaattatcttgaatgttccagtatagatcgtttgatgttaaagttcatttctctg |
32227693 |
T |
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