View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12125_high_44 (Length: 262)
Name: NF12125_high_44
Description: NF12125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12125_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 25334024 - 25334254
Alignment:
| Q |
17 |
agatcggatacaaaataaagatctccaatactcgtttagaattttatctggtttaatctatgcgtaatgaacacnnnnnnncctttgcataaacctctta |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
25334024 |
agatcggatacaaaataaagatctccaatactcgtttagaattttatctggtttaatctatgcgtaatgaacactttttttcctttgcataaacctctta |
25334123 |
T |
|
| Q |
117 |
attaattacctcaacaaatccaaataatcgagtcactgtcacggctgatttgtgttctagattttacaattatattatctgaacaaattaattgtcacaa |
216 |
Q |
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||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25334124 |
attaattacctcaacaaatccaattaatcgagtcactgtcactgctgatttgtgttctagattttacaattatattatctgaacaaattaattgtcacaa |
25334223 |
T |
|
| Q |
217 |
tatgaagctaattttcttctaccatagaagt |
247 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
25334224 |
tatgaagctaattttcttctaccatagaagt |
25334254 |
T |
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