View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12129_high_3 (Length: 281)
Name: NF12129_high_3
Description: NF12129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12129_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 6 - 265
Target Start/End: Complemental strand, 907738 - 907479
Alignment:
| Q |
6 |
agaatgtaaataatatgatgattgaagaactccaaagctctttggaagctcatgaaattcgaataacagaaagtttcgctatcggaactgtatacaaagc |
105 |
Q |
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| T |
907738 |
agaatgtaaataatatgatgattgaagaactccaaagctctttggaagctcatgaaattcgaataacagaaagtttcgctatcggaactgtatacaaagc |
907639 |
T |
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| Q |
106 |
tctacgagaacatgtttcgagaagaggtggtgatgagaagtgataggnnnnnnngtacaaatggaaagagtggaattcaaaaggggagaaattctaacca |
205 |
Q |
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| T |
907638 |
tctacgagaacatgtttcgagaagagatggtgatgagaagtgataggaaaaaaagtacaaatggaaagagtggaattcaaagggggagaaattctaacca |
907539 |
T |
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| Q |
206 |
aaggtgataaagatcaacctaatgttcttccacgaatggtagttcgaataagggcaaaag |
265 |
Q |
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| T |
907538 |
aaggtgataaagatcaacctaatgttcttccacgaatggtagttcgaataagggcaaaag |
907479 |
T |
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