View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12136_low_1 (Length: 610)

Name: NF12136_low_1
Description: NF12136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12136_low_1
NF12136_low_1
[»] chr3 (78 HSPs)
chr3 (20-315)||(48212049-48212361)
chr3 (458-597)||(48212505-48212644)
chr3 (459-588)||(55446223-55446358)
chr3 (461-588)||(39429335-39429462)
chr3 (459-588)||(36624523-36624658)
chr3 (459-588)||(22485131-22485266)
chr3 (510-588)||(4019815-4019893)
chr3 (461-588)||(40013100-40013233)
chr3 (459-571)||(105886-105998)
chr3 (459-588)||(1074722-1074857)
chr3 (459-588)||(40883694-40883829)
chr3 (459-588)||(49627923-49628058)
chr3 (459-588)||(53155258-53155393)
chr3 (476-588)||(19645374-19645492)
chr3 (458-588)||(47733711-47733841)
chr3 (510-588)||(53427015-53427093)
chr3 (459-588)||(11819249-11819384)
chr3 (459-530)||(55455031-55455102)
chr3 (510-588)||(2598295-2598373)
chr3 (459-586)||(14585628-14585761)
chr3 (459-566)||(31270492-31270605)
chr3 (510-584)||(43243025-43243099)
chr3 (459-566)||(54706565-54706678)
chr3 (459-588)||(33637569-33637704)
chr3 (504-588)||(40702646-40702730)
chr3 (459-588)||(48652268-48652403)
chr3 (459-588)||(48855043-48855178)
chr3 (459-588)||(53402787-53402922)
chr3 (459-588)||(35174874-35175009)
chr3 (459-534)||(53962284-53962359)
chr3 (460-530)||(31462638-31462708)
chr3 (458-588)||(32080582-32080718)
chr3 (508-588)||(22844267-22844347)
chr3 (458-530)||(39610375-39610447)
chr3 (461-588)||(25135145-25135272)
chr3 (460-555)||(31730811-31730906)
chr3 (460-564)||(48401029-48401139)
chr3 (510-588)||(1165215-1165293)
chr3 (459-537)||(3961647-3961725)
chr3 (510-588)||(21586116-21586194)
chr3 (510-588)||(39340416-39340494)
chr3 (510-572)||(54240303-54240365)
chr3 (495-588)||(33076487-33076580)
chr3 (459-588)||(54238848-54238981)
chr3 (524-588)||(4081945-4082009)
chr3 (508-588)||(20200877-20200957)
chr3 (459-588)||(30156109-30156244)
chr3 (524-588)||(36691627-36691691)
chr3 (512-588)||(50460409-50460485)
chr3 (510-557)||(3088514-3088561)
chr3 (459-530)||(3457105-3457176)
chr3 (460-588)||(19861107-19861241)
chr3 (510-557)||(28995159-28995206)
chr3 (510-565)||(32237838-32237893)
chr3 (463-530)||(45047684-45047751)
chr3 (510-557)||(45664438-45664485)
chr3 (510-588)||(25373901-25373979)
chr3 (510-556)||(47914444-47914490)
chr3 (510-571)||(22893551-22893612)
chr3 (508-588)||(20203059-20203139)
chr3 (481-585)||(27831287-27831391)
chr3 (508-588)||(34767201-34767281)
chr3 (510-562)||(43839362-43839414)
chr3 (459-530)||(13701893-13701964)
chr3 (472-559)||(20044711-20044798)
chr3 (461-536)||(31348615-31348690)
chr3 (510-557)||(33977775-33977822)
chr3 (463-530)||(34103640-34103706)
chr3 (510-557)||(43029900-43029947)
chr3 (511-565)||(21803749-21803803)
chr3 (481-588)||(41868151-41868264)
chr3 (512-565)||(11846767-11846820)
chr3 (510-555)||(22286603-22286648)
chr3 (510-555)||(25939331-25939376)
chr3 (515-588)||(40461814-40461887)
chr3 (459-492)||(40716401-40716434)
chr3 (516-588)||(4206382-4206454)
chr3 (510-586)||(33069871-33069947)
[»] chr4 (91 HSPs)
chr4 (458-588)||(5814511-5814641)
chr4 (459-566)||(8712696-8712803)
chr4 (459-588)||(38943968-38944103)
chr4 (459-571)||(13586077-13586195)
chr4 (510-587)||(12519873-12519950)
chr4 (459-588)||(12716943-12717072)
chr4 (458-588)||(31522111-31522247)
chr4 (461-570)||(55600381-55600490)
chr4 (472-588)||(6082250-6082366)
chr4 (459-588)||(6882122-6882257)
chr4 (459-588)||(36124168-36124303)
chr4 (460-588)||(6911847-6911981)
chr4 (460-588)||(22757261-22757395)
chr4 (459-571)||(26674538-26674656)
chr4 (459-588)||(7060489-7060624)
chr4 (459-588)||(26742283-26742418)
chr4 (459-588)||(42197719-42197854)
chr4 (474-570)||(56236666-56236762)
chr4 (459-530)||(477896-477967)
chr4 (459-569)||(29923001-29923117)
chr4 (459-588)||(394094-394229)
chr4 (458-588)||(24611620-24611755)
chr4 (459-588)||(27394996-27395131)
chr4 (463-588)||(30202208-30202339)
chr4 (459-588)||(43244201-43244336)
chr4 (459-530)||(13965726-13965797)
chr4 (459-571)||(19745555-19745673)
chr4 (459-571)||(19794133-19794251)
chr4 (459-530)||(20399787-20399858)
chr4 (458-533)||(24789354-24789429)
chr4 (458-533)||(24818830-24818905)
chr4 (459-530)||(24825815-24825886)
chr4 (464-588)||(626370-626500)
chr4 (510-588)||(4959393-4959471)
chr4 (510-588)||(52555559-52555637)
chr4 (510-587)||(28990515-28990592)
chr4 (458-530)||(24100305-24100377)
chr4 (459-588)||(24568534-24568668)
chr4 (471-588)||(51152302-51152425)
chr4 (459-530)||(7861090-7861161)
chr4 (459-530)||(32616743-32616814)
chr4 (510-565)||(37869259-37869314)
chr4 (459-530)||(39837761-39837832)
chr4 (459-530)||(53647798-53647869)
chr4 (510-580)||(26576330-26576400)
chr4 (510-588)||(29589180-29589258)
chr4 (461-588)||(44756862-44756995)
chr4 (459-571)||(22049247-22049359)
chr4 (458-530)||(39523574-39523647)
chr4 (510-571)||(42972255-42972316)
chr4 (510-588)||(44021398-44021478)
chr4 (510-587)||(46386594-46386671)
chr4 (531-587)||(29266706-29266762)
chr4 (517-588)||(29576940-29577012)
chr4 (459-562)||(3159160-3159263)
chr4 (513-588)||(6789695-6789770)
chr4 (476-588)||(7083632-7083750)
chr4 (459-530)||(20887641-20887711)
chr4 (510-565)||(23067690-23067745)
chr4 (459-571)||(25658333-25658451)
chr4 (459-530)||(29268661-29268732)
chr4 (510-557)||(30469973-30470020)
chr4 (510-557)||(46716744-46716791)
chr4 (459-530)||(50801383-50801454)
chr4 (459-529)||(2447966-2448036)
chr4 (510-588)||(9662070-9662148)
chr4 (510-588)||(29474147-29474225)
chr4 (461-515)||(43493186-43493240)
chr4 (461-588)||(45350890-45351023)
chr4 (461-588)||(45360369-45360502)
chr4 (459-588)||(8517279-8517411)
chr4 (510-555)||(32189196-32189241)
chr4 (514-562)||(7242614-7242662)
chr4 (520-588)||(47704165-47704233)
chr4 (510-557)||(4634500-4634547)
chr4 (471-542)||(22121624-22121695)
chr4 (514-589)||(31311689-31311764)
chr4 (510-565)||(41486792-41486847)
chr4 (510-588)||(1657385-1657463)
chr4 (510-588)||(14346648-14346726)
chr4 (510-588)||(15729800-15729878)
chr4 (510-588)||(38169979-38170057)
chr4 (458-588)||(40198371-40198501)
chr4 (513-586)||(1645376-1645449)
chr4 (471-536)||(13169319-13169384)
chr4 (516-565)||(44375117-44375166)
chr4 (510-555)||(53903798-53903843)
chr4 (520-588)||(2945364-2945432)
chr4 (510-586)||(3169643-3169719)
chr4 (472-556)||(22621610-22621694)
chr4 (472-588)||(41837510-41837626)
[»] chr1 (76 HSPs)
chr1 (458-583)||(42491058-42491183)
chr1 (459-588)||(47551261-47551390)
chr1 (459-588)||(14265450-14265585)
chr1 (461-588)||(9298242-9298369)
chr1 (459-588)||(32878874-32879003)
chr1 (461-588)||(12871789-12871916)
chr1 (461-588)||(4870853-4870986)
chr1 (458-587)||(29938403-29938531)
chr1 (460-588)||(28399155-28399283)
chr1 (459-588)||(45193448-45193583)
chr1 (459-571)||(29726434-29726552)
chr1 (510-588)||(13969459-13969537)
chr1 (510-588)||(33177417-33177495)
chr1 (461-588)||(42276523-42276656)
chr1 (459-588)||(44517313-44517449)
chr1 (460-588)||(2513426-2513554)
chr1 (459-588)||(15391072-15391207)
chr1 (459-588)||(18343779-18343913)
chr1 (460-527)||(8737517-8737584)
chr1 (459-571)||(45750644-45750762)
chr1 (458-588)||(26097831-26097961)
chr1 (458-587)||(32301503-32301632)
chr1 (459-588)||(10627166-10627300)
chr1 (459-588)||(33486850-33486985)
chr1 (459-588)||(51418150-51418285)
chr1 (510-588)||(26771323-26771401)
chr1 (460-529)||(4882244-4882313)
chr1 (510-571)||(32539025-32539086)
chr1 (510-571)||(48654877-48654938)
chr1 (459-588)||(32784245-32784380)
chr1 (459-588)||(33938833-33938968)
chr1 (472-580)||(40862653-40862761)
chr1 (459-530)||(3232954-3233025)
chr1 (459-530)||(7995444-7995515)
chr1 (459-530)||(17347763-17347834)
chr1 (510-565)||(21326690-21326745)
chr1 (459-588)||(27534863-27534998)
chr1 (459-530)||(28678014-28678085)
chr1 (459-530)||(29205451-29205522)
chr1 (459-530)||(37822230-37822300)
chr1 (458-588)||(10304743-10304873)
chr1 (458-588)||(13999131-13999256)
chr1 (510-588)||(44513821-44513899)
chr1 (510-588)||(44562568-44562646)
chr1 (508-565)||(6212756-6212813)
chr1 (510-571)||(15276282-15276343)
chr1 (459-588)||(13488356-13488491)
chr1 (472-588)||(24114505-24114621)
chr1 (487-538)||(13152634-13152685)
chr1 (459-530)||(13869803-13869874)
chr1 (512-571)||(23257307-23257366)
chr1 (458-533)||(39080796-39080871)
chr1 (510-588)||(38646801-38646879)
chr1 (510-564)||(47392353-47392407)
chr1 (547-588)||(6158856-6158897)
chr1 (466-571)||(31426993-31427098)
chr1 (471-571)||(25689684-25689784)
chr1 (508-556)||(31609957-31610005)
chr1 (512-588)||(34659460-34659536)
chr1 (515-571)||(40992520-40992576)
chr1 (510-557)||(14717120-14717167)
chr1 (510-557)||(22344762-22344809)
chr1 (471-538)||(25032964-25033031)
chr1 (521-588)||(26199808-26199875)
chr1 (460-571)||(28082305-28082416)
chr1 (471-534)||(29069721-29069784)
chr1 (472-571)||(30678434-30678533)
chr1 (510-565)||(36621569-36621624)
chr1 (510-588)||(5832451-5832529)
chr1 (460-538)||(8937797-8937874)
chr1 (511-565)||(15698416-15698470)
chr1 (496-570)||(49772287-49772361)
chr1 (504-537)||(11877328-11877361)
chr1 (515-588)||(35356373-35356446)
chr1 (459-507)||(20411738-20411786)
chr1 (461-533)||(29802794-29802866)
[»] chr2 (90 HSPs)
chr2 (458-588)||(5754453-5754583)
chr2 (459-588)||(44942452-44942587)
chr2 (459-588)||(11798348-11798478)
chr2 (463-588)||(34471136-34471261)
chr2 (459-588)||(34962896-34963031)
chr2 (461-588)||(6431228-6431355)
chr2 (471-588)||(15920052-15920169)
chr2 (459-571)||(9978506-9978624)
chr2 (459-571)||(10286844-10286962)
chr2 (461-588)||(17767386-17767513)
chr2 (460-587)||(4739496-4739629)
chr2 (458-588)||(36868173-36868309)
chr2 (489-588)||(11426839-11426938)
chr2 (459-588)||(4732236-4732371)
chr2 (472-588)||(7581913-7582029)
chr2 (459-588)||(22597301-22597436)
chr2 (459-588)||(12704853-12704988)
chr2 (460-571)||(13548745-13548855)
chr2 (461-588)||(45694272-45694399)
chr2 (461-563)||(20124620-20124722)
chr2 (460-588)||(43696035-43696169)
chr2 (458-530)||(12891002-12891074)
chr2 (512-588)||(28228441-28228517)
chr2 (459-588)||(28230917-28231052)
chr2 (459-564)||(32314608-32314719)
chr2 (459-588)||(38384277-38384412)
chr2 (510-565)||(3603202-3603257)
chr2 (459-530)||(4426542-4426613)
chr2 (459-530)||(18089281-18089352)
chr2 (459-530)||(35333671-35333742)
chr2 (459-530)||(43474012-43474083)
chr2 (510-588)||(20036599-20036677)
chr2 (460-571)||(31908654-31908770)
chr2 (459-589)||(41797760-41797893)
chr2 (458-588)||(13740480-13740616)
chr2 (459-527)||(823845-823913)
chr2 (516-588)||(2763347-2763419)
chr2 (508-588)||(43929119-43929199)
chr2 (459-530)||(4604191-4604262)
chr2 (510-565)||(7640198-7640253)
chr2 (459-530)||(28261772-28261843)
chr2 (510-589)||(29734407-29734486)
chr2 (510-588)||(25622863-25622941)
chr2 (521-586)||(11550416-11550481)
chr2 (471-569)||(13878848-13878952)
chr2 (471-569)||(14018973-14019077)
chr2 (495-588)||(20570175-20570268)
chr2 (459-588)||(29542958-29543094)
chr2 (458-588)||(34416583-34416719)
chr2 (508-588)||(34480179-34480260)
chr2 (510-557)||(3390640-3390687)
chr2 (510-565)||(5930640-5930695)
chr2 (459-530)||(9689869-9689940)
chr2 (510-557)||(25516709-25516756)
chr2 (510-557)||(36508146-36508193)
chr2 (510-557)||(38822289-38822336)
chr2 (510-565)||(41177075-41177130)
chr2 (510-588)||(19580821-19580899)
chr2 (510-588)||(26491518-26491596)
chr2 (510-588)||(42105585-42105662)
chr2 (460-566)||(7072790-7072902)
chr2 (458-571)||(11580973-11581086)
chr2 (495-588)||(17116227-17116319)
chr2 (510-571)||(29812451-29812512)
chr2 (459-528)||(32015419-32015488)
chr2 (459-516)||(38535203-38535260)
chr2 (471-587)||(5171974-5172089)
chr2 (459-580)||(11937687-11937813)
chr2 (475-588)||(17267946-17268065)
chr2 (458-498)||(18717362-18717402)
chr2 (459-588)||(33012214-33012349)
chr2 (512-588)||(37883872-37883948)
chr2 (459-571)||(40039151-40039263)
chr2 (460-571)||(17792641-17792751)
chr2 (510-557)||(27023989-27024036)
chr2 (510-557)||(43567090-43567137)
chr2 (510-557)||(44167561-44167608)
chr2 (510-556)||(3465146-3465192)
chr2 (510-588)||(31125198-31125276)
chr2 (510-588)||(31262772-31262850)
chr2 (510-588)||(35353857-35353935)
chr2 (515-588)||(15673787-15673860)
chr2 (511-588)||(16720667-16720744)
chr2 (510-555)||(27191189-27191234)
chr2 (510-555)||(27841003-27841048)
chr2 (459-531)||(6510648-6510720)
chr2 (524-588)||(11942605-11942669)
chr2 (512-588)||(13268791-13268867)
chr2 (521-565)||(18141323-18141367)
chr2 (524-588)||(25068087-25068151)
[»] chr8 (58 HSPs)
chr8 (459-588)||(13576028-13576157)
chr8 (458-571)||(10334341-10334454)
chr8 (461-588)||(32778791-32778918)
chr8 (459-588)||(7579683-7579818)
chr8 (458-588)||(3204613-3204749)
chr8 (458-588)||(14600526-14600662)
chr8 (459-588)||(2025052-2025187)
chr8 (458-588)||(19720174-19720310)
chr8 (472-588)||(6219930-6220046)
chr8 (510-589)||(5917567-5917646)
chr8 (459-571)||(10338667-10338785)
chr8 (460-588)||(31407576-31407710)
chr8 (461-588)||(10148113-10148246)
chr8 (465-588)||(11162055-11162184)
chr8 (459-588)||(37128316-37128450)
chr8 (459-588)||(39067518-39067652)
chr8 (463-588)||(41361902-41362033)
chr8 (459-530)||(4757331-4757402)
chr8 (459-588)||(30026710-30026845)
chr8 (459-530)||(43937069-43937140)
chr8 (511-588)||(16809081-16809158)
chr8 (512-588)||(31147646-31147723)
chr8 (472-588)||(38545982-38546103)
chr8 (459-527)||(2234365-2234433)
chr8 (459-571)||(10633032-10633144)
chr8 (459-530)||(9501752-9501823)
chr8 (459-571)||(12329793-12329911)
chr8 (459-530)||(37612819-37612890)
chr8 (510-564)||(14115671-14115725)
chr8 (510-588)||(15665756-15665834)
chr8 (460-530)||(31202625-31202695)
chr8 (510-564)||(41996760-41996814)
chr8 (490-588)||(23971011-23971115)
chr8 (508-557)||(37129525-37129574)
chr8 (459-535)||(2968698-2968774)
chr8 (508-588)||(3925509-3925589)
chr8 (510-588)||(7269285-7269362)
chr8 (510-588)||(10042989-10043067)
chr8 (510-588)||(13977625-13977703)
chr8 (510-571)||(3681129-3681190)
chr8 (524-589)||(5526039-5526104)
chr8 (510-562)||(283833-283885)
chr8 (510-562)||(631992-632044)
chr8 (510-562)||(817804-817856)
chr8 (512-588)||(12244035-12244111)
chr8 (460-566)||(13570589-13570701)
chr8 (471-571)||(19489007-19489107)
chr8 (510-565)||(5457288-5457343)
chr8 (510-565)||(8054650-8054704)
chr8 (510-565)||(16996731-16996786)
chr8 (459-588)||(22787658-22787791)
chr8 (510-557)||(44295533-44295580)
chr8 (512-558)||(9992886-9992932)
chr8 (510-564)||(18196989-18197043)
chr8 (510-557)||(5328169-5328213)
chr8 (508-557)||(32062009-32062058)
chr8 (511-588)||(32256540-32256617)
chr8 (507-588)||(33526600-33526681)
[»] chr7 (83 HSPs)
chr7 (458-588)||(21954644-21954774)
chr7 (459-588)||(45482230-45482365)
chr7 (458-588)||(45457376-45457512)
chr7 (459-571)||(9719810-9719928)
chr7 (459-588)||(36579161-36579296)
chr7 (461-588)||(2622760-2622893)
chr7 (463-589)||(4621192-4621318)
chr7 (471-588)||(14657677-14657794)
chr7 (459-588)||(24320043-24320178)
chr7 (460-588)||(39707452-39707579)
chr7 (459-588)||(1280957-1281092)
chr7 (459-571)||(21990828-21990946)
chr7 (461-588)||(9785485-9785618)
chr7 (459-571)||(28664778-28664896)
chr7 (459-588)||(29352392-29352521)
chr7 (458-530)||(11833183-11833255)
chr7 (459-588)||(17509024-17509159)
chr7 (459-588)||(17544055-17544190)
chr7 (459-588)||(41288122-41288257)
chr7 (459-571)||(24988317-24988435)
chr7 (460-588)||(26161118-26161252)
chr7 (458-588)||(48304212-48304349)
chr7 (458-588)||(3266551-3266687)
chr7 (459-588)||(38277010-38277139)
chr7 (520-588)||(46918626-46918694)
chr7 (462-585)||(9137125-9137248)
chr7 (459-530)||(10094607-10094678)
chr7 (459-530)||(46025913-46025984)
chr7 (460-554)||(6496059-6496153)
chr7 (462-588)||(39532795-39532927)
chr7 (459-571)||(31703374-31703486)
chr7 (524-588)||(32643205-32643269)
chr7 (459-571)||(37714645-37714757)
chr7 (508-588)||(45949498-45949578)
chr7 (459-530)||(21603626-21603697)
chr7 (514-588)||(5024875-5024949)
chr7 (510-588)||(33530294-33530372)
chr7 (459-566)||(42644838-42644951)
chr7 (510-555)||(23732245-23732290)
chr7 (508-589)||(26638514-26638595)
chr7 (510-587)||(36350385-36350461)
chr7 (459-588)||(15674431-15674566)
chr7 (459-588)||(17473572-17473707)
chr7 (459-588)||(17579507-17579642)
chr7 (459-588)||(22747329-22747464)
chr7 (471-588)||(36253108-36253231)
chr7 (510-565)||(134987-135042)
chr7 (510-565)||(7986109-7986164)
chr7 (510-565)||(8319532-8319587)
chr7 (510-581)||(10250309-10250380)
chr7 (459-530)||(10574547-10574618)
chr7 (459-588)||(36719372-36719507)
chr7 (510-565)||(40775484-40775539)
chr7 (510-588)||(19895503-19895581)
chr7 (514-588)||(22379528-22379602)
chr7 (481-588)||(44482693-44482806)
chr7 (510-571)||(772660-772721)
chr7 (471-528)||(5684542-5684599)
chr7 (471-528)||(5709592-5709649)
chr7 (458-588)||(40761753-40761889)
chr7 (524-588)||(6667632-6667696)
chr7 (481-565)||(9934031-9934115)
chr7 (512-588)||(14707802-14707877)
chr7 (512-588)||(21552274-21552350)
chr7 (461-532)||(25531620-25531692)
chr7 (512-588)||(31724839-31724915)
chr7 (510-557)||(8611474-8611521)
chr7 (472-571)||(10623977-10624076)
chr7 (510-557)||(21329148-21329195)
chr7 (510-589)||(28015574-28015653)
chr7 (459-530)||(32740918-32740989)
chr7 (510-557)||(43807000-43807047)
chr7 (551-589)||(26638437-26638475)
chr7 (510-588)||(35362926-35363004)
chr7 (526-588)||(37375866-37375928)
chr7 (458-527)||(27050350-27050419)
chr7 (508-557)||(40476922-40476971)
chr7 (523-564)||(40657840-40657881)
chr7 (510-563)||(42490920-42490973)
chr7 (459-587)||(9137574-9137701)
chr7 (508-588)||(16273597-16273677)
chr7 (510-538)||(26017527-26017555)
chr7 (520-588)||(43098804-43098872)
[»] chr6 (40 HSPs)
chr6 (459-588)||(13871446-13871575)
chr6 (459-588)||(2304658-2304793)
chr6 (459-588)||(23637940-23638075)
chr6 (459-588)||(6419678-6419813)
chr6 (459-588)||(1106687-1106822)
chr6 (459-588)||(23654416-23654551)
chr6 (510-588)||(892501-892579)
chr6 (459-566)||(8693496-8693609)
chr6 (459-588)||(4921707-4921836)
chr6 (459-588)||(12654129-12654258)
chr6 (458-588)||(31705330-31705466)
chr6 (459-588)||(35219733-35219868)
chr6 (459-589)||(1915011-1915141)
chr6 (459-566)||(15589950-15590063)
chr6 (459-588)||(12481190-12481325)
chr6 (459-588)||(23101228-23101363)
chr6 (459-588)||(31937240-31937375)
chr6 (508-588)||(32804510-32804590)
chr6 (460-587)||(8508295-8508422)
chr6 (461-588)||(4393938-4394071)
chr6 (471-588)||(1418923-1419040)
chr6 (459-520)||(19402704-19402765)
chr6 (459-587)||(27135278-27135405)
chr6 (459-530)||(6296133-6296204)
chr6 (459-530)||(6302943-6303014)
chr6 (510-565)||(19760005-19760060)
chr6 (510-588)||(5417043-5417121)
chr6 (512-557)||(15127979-15128024)
chr6 (516-588)||(1944319-1944391)
chr6 (510-557)||(12576331-12576378)
chr6 (510-565)||(13233950-13234005)
chr6 (510-565)||(23843266-23843321)
chr6 (458-587)||(12156301-12156430)
chr6 (461-571)||(3610190-3610298)
chr6 (510-565)||(11426158-11426213)
chr6 (525-588)||(30813304-30813367)
chr6 (510-588)||(548685-548763)
chr6 (510-588)||(33194811-33194889)
chr6 (495-588)||(31395452-31395545)
chr6 (548-588)||(19402672-19402712)
[»] scaffold0432 (1 HSPs)
scaffold0432 (509-588)||(2262-2341)
[»] chr5 (63 HSPs)
chr5 (458-588)||(25962084-25962214)
chr5 (461-588)||(17687373-17687500)
chr5 (464-590)||(39915664-39915790)
chr5 (459-588)||(6635414-6635549)
chr5 (466-586)||(177926-178051)
chr5 (461-588)||(7771641-7771774)
chr5 (461-586)||(12215301-12215425)
chr5 (472-588)||(39531232-39531352)
chr5 (460-571)||(23881953-23882070)
chr5 (459-588)||(33164289-33164423)
chr5 (459-565)||(11858076-11858186)
chr5 (459-588)||(17523348-17523477)
chr5 (458-588)||(23428417-23428553)
chr5 (459-588)||(2555170-2555305)
chr5 (459-588)||(6281210-6281345)
chr5 (510-586)||(25770823-25770899)
chr5 (459-530)||(980913-980984)
chr5 (461-588)||(14535066-14535193)
chr5 (459-588)||(17331494-17331629)
chr5 (472-585)||(35275815-35275928)
chr5 (459-568)||(17699719-17699834)
chr5 (516-588)||(28500912-28500984)
chr5 (459-588)||(29097955-29098090)
chr5 (459-530)||(11734703-11734774)
chr5 (459-571)||(20483352-20483470)
chr5 (461-588)||(17732206-17732339)
chr5 (461-588)||(28040797-28040930)
chr5 (510-588)||(28388927-28389005)
chr5 (510-588)||(29154437-29154515)
chr5 (458-587)||(26905464-26905593)
chr5 (459-568)||(3079174-3079289)
chr5 (508-588)||(6647732-6647812)
chr5 (508-588)||(19645861-19645940)
chr5 (510-570)||(34874078-34874138)
chr5 (510-557)||(4070768-4070815)
chr5 (512-571)||(5378521-5378580)
chr5 (510-557)||(6887028-6887075)
chr5 (510-565)||(9034784-9034839)
chr5 (510-557)||(10923984-10924031)
chr5 (461-520)||(12891844-12891903)
chr5 (459-530)||(26294941-26295012)
chr5 (510-557)||(28618819-28618866)
chr5 (510-557)||(29310204-29310251)
chr5 (459-571)||(32347551-32347669)
chr5 (460-530)||(34431227-34431295)
chr5 (463-530)||(43494030-43494097)
chr5 (510-588)||(4726747-4726825)
chr5 (464-530)||(18653953-18654019)
chr5 (474-588)||(32309345-32309459)
chr5 (510-588)||(34844133-34844211)
chr5 (517-587)||(34866655-34866725)
chr5 (510-588)||(41554704-41554782)
chr5 (510-587)||(33486389-33486466)
chr5 (521-581)||(37219231-37219291)
chr5 (524-588)||(42396333-42396397)
chr5 (521-588)||(14910495-14910562)
chr5 (510-557)||(31646046-31646093)
chr5 (510-557)||(35906486-35906533)
chr5 (510-588)||(20270931-20271009)
chr5 (458-588)||(6681696-6681832)
chr5 (472-588)||(7150990-7151106)
chr5 (510-538)||(20146088-20146116)
chr5 (512-564)||(41358248-41358300)
[»] scaffold0321 (1 HSPs)
scaffold0321 (459-588)||(6950-7079)
[»] scaffold0157 (1 HSPs)
scaffold0157 (510-587)||(961-1038)
[»] scaffold0001 (1 HSPs)
scaffold0001 (471-588)||(404081-404197)
[»] scaffold1350 (1 HSPs)
scaffold1350 (459-588)||(1740-1875)
[»] scaffold0155 (1 HSPs)
scaffold0155 (458-587)||(35249-35384)
[»] scaffold0121 (1 HSPs)
scaffold0121 (459-588)||(13065-13200)
[»] scaffold1379 (2 HSPs)
scaffold1379 (463-570)||(927-1034)
scaffold1379 (461-515)||(143-197)
[»] scaffold0056 (1 HSPs)
scaffold0056 (473-588)||(74344-74465)
[»] scaffold0999 (1 HSPs)
scaffold0999 (487-588)||(1898-1999)
[»] scaffold0294 (1 HSPs)
scaffold0294 (459-588)||(3887-4022)
[»] scaffold0722 (1 HSPs)
scaffold0722 (510-565)||(5368-5423)
[»] scaffold0316 (1 HSPs)
scaffold0316 (510-565)||(12045-12100)
[»] scaffold0665 (1 HSPs)
scaffold0665 (510-564)||(970-1024)
[»] scaffold0542 (1 HSPs)
scaffold0542 (458-538)||(3947-4027)
[»] scaffold0219 (1 HSPs)
scaffold0219 (508-588)||(21191-21271)
[»] scaffold0536 (1 HSPs)
scaffold0536 (471-530)||(3078-3137)
[»] scaffold0024 (1 HSPs)
scaffold0024 (510-557)||(36741-36788)
[»] scaffold0007 (1 HSPs)
scaffold0007 (472-571)||(201894-201993)
[»] scaffold0023 (1 HSPs)
scaffold0023 (526-587)||(91224-91285)
[»] scaffold0018 (1 HSPs)
scaffold0018 (508-588)||(136893-136973)
[»] scaffold0045 (1 HSPs)
scaffold0045 (510-557)||(9508-9555)
[»] scaffold0011 (1 HSPs)
scaffold0011 (510-565)||(11231-11286)
[»] scaffold1294 (1 HSPs)
scaffold1294 (510-588)||(992-1070)
[»] scaffold0340 (1 HSPs)
scaffold0340 (510-588)||(11595-11673)
[»] scaffold0012 (1 HSPs)
scaffold0012 (510-571)||(244853-244914)
[»] scaffold0202 (1 HSPs)
scaffold0202 (461-533)||(22507-22579)


Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 20 - 315
Target Start/End: Original strand, 48212049 - 48212361
Alignment:
Q  20 tctctatgtggaacaatatgtgtattcaaaagttatcttccaa------ttaaaacataaaaataccattcgaaagttatctctggaacaatttgtgcat 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||      ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  48212049 tctctatgtggaacaatatgtgcattcaaaagttatcttccaaaaccttttaaaacataaaaat-ccattcgaaagttatctctggaacaatttgtgcat 48212147  T
Q  114 tccacgagactaaaagaacaacatcatgtactttttctattgggccgctaaaaaattcatcaaggacaatagagtgtgatatgataaggaccccaaagaa 213  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  48212148 tcctggagactaaaagaacaacatcatgtactttttctattgggccgctaaaaaattcatcaaggacaatagagtgtgatatgataaggatcccaaagga 48212247  T
Q  214 aaatctttaacgctatttgtaaaactatcaaaccctaattgtcaccaccttttttcttatt------------tagataatttagtgtcaattttgattc 301  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||             ||||||||||||||||||||||||||    
T  48212248 aaatctttaacgctatttgtaaaactatcaaaccctagctgtcaccaccttttttcttcttgtctaacaaaaaaagataatttagtgtcaattttgattc 48212347  T
Q  302 aaaatcaactttct 315  Q
    ||||||||||||||    
T  48212348 aaaatcaactttct 48212361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 48212505 - 48212644
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  48212505 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtcaatattgcagatccg 48212604  T
Q  558 aagacatgagtattatggagacttgaatatatgcacaggt 597  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  48212605 aagacatgagtattctggagacttgaatatatgcataggt 48212644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 55446223 - 55446358
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||||||      |||||||||| |||| ||| | |||||||    
T  55446223 cgtcttagtgcggggtttatttgattcagattgaaggattagctttgagcaagtgcagatccaatcaatgacaatgactttagcgtcgtcaacgttgcag 55446322  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| || |||||||||| || |||||||||||||    
T  55446323 atccggagtcatgagtattctgaagacttgaatata 55446358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 39429462 - 39429335
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||||  |||||||||  ||| || ||||| ||||||||||||||||||||| ||||||||||||||||||   | ||| | ||| |||||||||||    
T  39429462 tcttagtgtggtgtttatttaatttaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttgaaatcgtcaacgtttcagatccgaag 39429363  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    ||||||||||| | ||||||||||||||    
T  39429362 acatgagtattctagagacttgaatata 39429335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 36624658 - 36624523
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatga------ctttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| | ||||||||||||||| ||||||||      ||||||| | ||| | |||||||    
T  36624658 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttaagcaagtgcagatccgatcaatgacaatggctttggcatcgtcaacgttgcag 36624559  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||||||| ||||||| ||||||||    
T  36624558 atccggagacatgagtattctggagacatgaatata 36624523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 22485131 - 22485266
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||    ||||  |||||||||||||||  || | |||||||    
T  22485131 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccggtcaatgacaatgactttggcgtcctcaacgttgcag 22485230  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| ||||||  |||||| ||||||||    
T  22485231 atccgaagacataagtattccggagacatgaatata 22485266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 4019815 - 4019893
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||||| || |||||||||| ||||||||||||||||    
T  4019815 agtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgagtattctggagacttgaatata 4019893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 40013233 - 40013100
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaa------tgactttggcgttgtccatgttgcagat 554  Q
    ||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||| |||||||      |||||||| ||| ||| | |||||||||    
T  40013233 tcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagattcaatcaatgacaatgactttgacgtcgtcaacgttgcagat 40013134  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||||||  |||||| ||||||||    
T  40013133 ccggagacatgagtattccggagacatgaatata 40013100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 105998 - 105886
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||||  ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| |||||||||||| | || ||| | ||||||||| ||     
T  105998 cgtcttagtgtcgtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgacttttgtgtcgtcaacgttgcagattcgg 105899  T
Q  559 agacatgagtatt 571  Q
    |||||||||||||    
T  105898 agacatgagtatt 105886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 1074857 - 1074722
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    |||||||||| |||| ||||| ||||||  ||||| |||||||| |||||||||||| |||| |||||||||      |||||||| ||| | |||||||    
T  1074857 cgtcttagtgtagtgattatttgattcaagttgaaagattagctttgagcaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 1074758  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||||||||||||    
T  1074757 atccggagacatgagtattccggagacttgaatata 1074722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 40883829 - 40883694
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||| || ||||||| ||||| |||||| | ||||||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  40883829 cgtcttagtgcggtgtttctttgattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcgacgttgcag 40883730  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||  ||| || ||||||||    
T  40883729 atccgaagacatgagtatttcggatacatgaatata 40883694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 49628058 - 49627923
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| | ||||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  49628058 cgtcttagtgcggtgtttatttgattcaggttgaaagattagcttttagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 49627959  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||   ||||| ||||||||    
T  49627958 atccggagacatgagtattccagagacatgaatata 49627923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 53155393 - 53155258
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||| |||| ||      ||||||||||||||| ||| |  ||||||    
T  53155393 cgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaactttgcag 53155294  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  | |||| ||||||||    
T  53155293 atccggagacatgagtattccgaagacatgaatata 53155258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 476 - 588
Target Start/End: Original strand, 19645374 - 19645492
Alignment:
Q  476 tattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat------gactttggcgttgtccatgttgcagatccgaagacatgagta 569  Q
    |||| ||||||| ||||| |||||||| ||||||||||||||||| ||||||      ||||||||||| ||| || |||||||||||||||||||||||    
T  19645374 tatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaatattgcagatccgaagacatgagta 19645473  T
Q  570 ttatggagacttgaatata 588  Q
    ||  |||||| ||||||||    
T  19645474 ttccggagacatgaatata 19645492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 47733841 - 47733711
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||| ||||||||| ||||||| |||||  ||||| | ||||||| |||| || ||||||||||||||||||| ||| | |||||||||||     
T  47733841 tcgtcttagtgcggtgtttatttgattcaggttgaaatattagttttgagcaaatgcatattcaatcaatgactttggcgtcgtcaaagttgcagatcca 47733742  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     | |||  ||||||  |||||||||||||||    
T  47733741 gacacaatagtattccggagacttgaatata 47733711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 53427015 - 53427093
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||  | |||||||||||||    
T  53427015 agtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccgaagacttgagtattccgaagacttgaatata 53427093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 11819249 - 11819384
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat------gactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||| || | ||| |||| ||||||      ||||||||||| ||| | |||||||    
T  11819249 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaggagcatatccgatcaataacaatgactttggcgtcgtcaacgttgcag 11819348  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| |||  |||||||||||||||    
T  11819349 atccgaagacatgaggattccggagacttgaatata 11819384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 55455031 - 55455102
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  55455031 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 55455102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 2598295 - 2598373
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||| || ||| |||||||| || ||||||||||||||||  ||||||| |||||||    
T  2598295 agtgcagatccaatcaatgactttggtgtcgtcaatgttgcaaattcgaagacatgagtatttcggagactagaatata 2598373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 586
Target Start/End: Original strand, 14585628 - 14585761
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| ||| |||| ||||||||||||||||| ||      ||||||||||||||| ||| |  ||||||    
T  14585628 cgtcttagtgcggtgtttatttgattcaggttgaaagatcagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacattgcag 14585727  T
Q  553 atccgaagacatgagtattatggagacttgaata 586  Q
    ||| | |||||||||||||  |||||| ||||||    
T  14585728 atctggagacatgagtattccggagacatgaata 14585761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 566
Target Start/End: Original strand, 31270492 - 31270605
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||| |||||| ||      ||||||||||||||| ||| | |||||||    
T  31270492 cgtcttagtgcggtgtttattcgattcaggttgaaagattagctttgagcaagtgtagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 31270591  T
Q  553 atccgaagacatga 566  Q
    ||||| ||||||||    
T  31270592 atccggagacatga 31270605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 584
Target Start/End: Original strand, 43243025 - 43243099
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaa 584  Q
    |||||||||| |||||||||| ||| ||| ||| |||||| ||||| ||||||||||||||||||||||||||||    
T  43243025 agtgcagatcaaatcaatgaccttgacgtcgtcaatgttgtagatctgaagacatgagtattatggagacttgaa 43243099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 566
Target Start/End: Complemental strand, 54706678 - 54706565
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatga------ctttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || ||||||||||||||||| ||||||||      ||||||||| ||| | |||||||    
T  54706678 cgtcttagtgcggtgtttatttgattcaggttgaaagattacctttgagcaagtgcagatccgatcaatgacaatggctttggcgtcgtcaacgttgcag 54706579  T
Q  553 atccgaagacatga 566  Q
    ||||| ||||||||    
T  54706578 atccggagacatga 54706565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 33637569 - 33637704
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg------actttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| |||| || ||||| |||||||| ||| |||  |||||||| |||||||      |||||||||| ||| | |||||||    
T  33637569 cgtcttagtgcggtgtttatttgatttaggttgaaagattagctttgaacaaaagcagatccgatcaatgaaaatgactttggcgtcgtcaacgttgcag 33637668  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||||||||||    
T  33637669 atccgtagacatgaggattccggagacttgaatata 33637704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 40702646 - 40702730
Alignment:
Q  504 tgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| || | ||||||||||||||||| ||| |||||||||||||  |||||||||||||   ||||||||||||||    
T  40702646 tgagcaagtgcatattctatcaatgactttggcgtcgtcaatgttgcagatcctgagacatgagtatttcagagacttgaatata 40702730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 48652403 - 48652268
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatga------ctttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| |||| || ||||| ||||| || ||| |||| |||||||| ||||||||      ||||||||| ||| | |||||||    
T  48652403 cgtcttagtgcggtgtttatttgatttaggttgaaagattaactttgaacaagagcagatccgatcaatgaaaatgactttggcgtcgtcaacgttgcag 48652304  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||||||||||    
T  48652303 atccggagacatgaggattccggagacttgaatata 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 48855043 - 48855178
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  ||||||||| ||||||  ||||| |||||||| ||||||||||||||||| ||      ||||||||||||| | |||   |||||||    
T  48855043 cgtcttagtgtggtgtttatttgattcatgttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcatcgtcaccgttgcag 48855142  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||||||||||    
T  48855143 atccggagacatgaggattccggagacttgaatata 48855178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 53402787 - 53402922
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| |||||||||||| |||| ||      ||||||||||||||| ||| | |||||||    
T  53402787 cgtcttagtgcgctgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 53402886  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||  |||||||||||||  |||||| | ||||||    
T  53402887 atccagagacatgagtattccggagacataaatata 53402922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 35174874 - 35175009
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagat----ccaat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||| ||     ||||  |||||||||||||||  || | |||||||    
T  35174874 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcatatttgatcaatgacaatgactttggcgtcatcaacgttgcag 35174973  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||  | ||||||||||||| ||||||| ||||||||    
T  35174974 atatggagacatgagtattctggagacatgaatata 35175009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 53962284 - 53962359
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttg 534  Q
    ||||||||||| ||||||||| ||||||| || || |||||||| |||||||||||||||||||||| ||| ||||    
T  53962284 cgtcttagtgcggtgtttatttgattcaggttaaaagattagctttgagcaagtgcagatccaatcattgattttg 53962359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 460 - 530
Target Start/End: Complemental strand, 31462708 - 31462638
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||| | ||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  31462708 gtcttagtgcggcgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 31462638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 32080718 - 32080582
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgca 551  Q
    ||||| ||||||  |||||||| ||||||| ||||| |||||||| ||| |||| |||||||| |||||||||      ||||||||  || | ||||||    
T  32080718 tcgtcatagtgcgatgtttatttgattcagcttgaatgattagctttgaacaagagcagatccgatcaatgacaatgactttggcgtcatcaacgttgca 32080619  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||||||||| |||  |||||||||||||||    
T  32080618 gatccggagacatgaggatttcggagacttgaatata 32080582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 22844267 - 22844347
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| ||||||||||||||| |||||| |  ||||||||||||||||||| |||||  |||||| | ||||||    
T  22844267 caagtgcagatcaaatcaatgactttggagttgtcaacattgcagatccgaagacatgggtattccggagacctaaatata 22844347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 39610375 - 39610447
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||| |  |||||||| |||| |||||||| |||||||| ||||||||||||||||| |||||||||    
T  39610375 tcgtcttagtacgttgtttatttgatttagattgaaagattagctttgagcaagtgcagatccgatcaatgac 39610447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 25135272 - 25135145
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||||||||||||||  ||||||  |||||  ||||| | |||||||||||| |  |||||||||| |||| | | ||| | |||||||||  ||||    
T  25135272 tcttagtgcagtgtttatctgattcaagttgaaatattagatttgagcaagtgcaaaatcaatcaatgattttgacatcgtcaacgttgcagatatgaag 25135173  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    |||||| |||| || |||||||||||||    
T  25135172 acatgaatattctgaagacttgaatata 25135145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 555
Target Start/End: Original strand, 31730811 - 31730906
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatc 555  Q
    ||||||||||| |||||||| ||||||  ||||| ||||| || ||| |||||||| |||| |||||| ||||||||||  || ||||||||||||    
T  31730811 gtcttagtgcaatgtttatttgattcaagttgaaagattaactttgaacaagtgcaaatccgatcaataactttggcgtcatcaatgttgcagatc 31730906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 564
Target Start/End: Original strand, 48401029 - 48401139
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcaga 553  Q
    ||||| |||| ||||||||| ||||||| || || |||||||| ||||||||||||||||| ||      ||||||||||||||| ||| | ||||||||    
T  48401029 gtctttgtgcggtgtttatttgattcaggttaaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcaga 48401128  T
Q  554 tccgaagacat 564  Q
    |||| ||||||    
T  48401129 tccggagacat 48401139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 1165293 - 1165215
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||| | |||||  |||| |||||| || ||||||    
T  1165293 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatata 1165215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 537
Target Start/End: Complemental strand, 3961725 - 3961647
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcg 537  Q
    ||||||||||| ||||||||| ||||||| ||| | ||||| || ||||||| || |||| ||||||||||||||||||    
T  3961725 cgtcttagtgcggtgtttatttgattcaggttgtaagattaactttgagcaaatgtagattcaatcaatgactttggcg 3961647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 21586116 - 21586194
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||||||||||||| ||| ||||| |||| ||||||| ||||||| |||||  ||||| |||||||||    
T  21586116 agtgcaaatccaatcaatgactttgacgtcgtccacgttggagatccggagacatgtgtattccggagagttgaatata 21586194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 39340416 - 39340494
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||| ||||||||||||||| ||| ||| | |||||||||||| ||||||| |||||  |||||||||||||||    
T  39340416 agtgctgattcaatcaatgactttgtcgtcgtcaacgttgcagatccggagacatgtgtattccggagacttgaatata 39340494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 572
Target Start/End: Original strand, 54240303 - 54240365
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatta 572  Q
    |||||| |||||||||||||||||||||   ||||||||||||||||| |||||||| |||||    
T  54240303 agtgcaaatccaatcaatgactttggcgacatccatgttgcagatccggagacatgattatta 54240365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 588
Target Start/End: Original strand, 33076487 - 33076580
Alignment:
Q  495 gattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||| ||| | ||||||||||||||||||||||||| |||  |||| |||||||||||| || ||||  ||||  ||||| |||||||||    
T  33076487 gattagctttgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggaggcatggttattccggagatttgaatata 33076580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 54238981 - 54238848
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||  ||| ||||||| ||||| |||||| | |||||||||||| |||| |||||||||      |||||||||||| | |||||||    
T  54238981 cgtcttagtgcggtgt--atttgattcaggttgaaagattagatttgagcaagtgcatatccgatcaatgacaatgactttggcgttgtcaacgttgcag 54238884  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    || | |||||| |||||||  |||||| ||||||||    
T  54238883 attcaaagacacgagtattccggagacatgaatata 54238848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 524 - 588
Target Start/End: Original strand, 4081945 - 4082009
Alignment:
Q  524 caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||| | |||||||||||||| |||||| ||||  |||||||||||||||    
T  4081945 caatgactttggcgtcgtcaacgttgcagatccgaatacatgattattccggagacttgaatata 4082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 20200957 - 20200877
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||| |||||  |||| |||||| ||||| |||||||| ||||  ||||| || ||||||    
T  20200957 caagtgcagatccaatcaatgacttcggcgtcttccacgttgcaaatccggagacatgattatttcggagatttaaatata 20200877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 30156244 - 30156109
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||| | |||||  ||||||| ||||||||| ||||||| ||      |||||| |||||||| ||| | |||||||    
T  30156244 cgtcttagtgcggtgtttatttgattctggttgaaaaattagctttgagcaagttcagatccgatcaataacaatgattttggcgtcgtcaaggttgcag 30156145  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    |||||  |||||| |||||  |||||| ||||||||    
T  30156144 atccggggacatgggtatttcggagacatgaatata 30156109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 524 - 588
Target Start/End: Complemental strand, 36691691 - 36691627
Alignment:
Q  524 caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||| | |||||||||| | |||||||||||||  |||||||||||||||    
T  36691691 caatgactttggcgtcgtcaacgttgcagatctggagacatgagtattccggagacttgaatata 36691627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 50460409 - 50460485
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||||||||| |||||| ||||||| | |||||| |||||||||||||||||||    |||||||||||||    
T  50460409 tgcaaatccaatcaataactttgacgttgtcaacgttgcaaatccgaagacatgagtattccaaagacttgaatata 50460485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 3088561 - 3088514
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  3088561 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 3088514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 3457105 - 3457176
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||| | ||||||||| ||||||  ||||| |||||||| |||||||||||| |||| |||||||||    
T  3457105 cgtcttagtacggtgtttatttgattcaagttgaaagattagctttgagcaagtgcaaatccgatcaatgac 3457176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 588
Target Start/End: Complemental strand, 19861241 - 19861107
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcaga 553  Q
    ||||||||||| |||||| | ||||||| |||||  |||| || |||||||||||| || | |||||||||      |||| | | ||| | ||||||||    
T  19861241 gtcttagtgcaatgtttacttgattcaggttgaaatattaactttgagcaagtgcatattcgatcaatgacaatgactttgacatcgtcaacgttgcaga 19861142  T
Q  554 tccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||||||||||| | ||||||||||||||    
T  19861141 tccggagacatgagtattctagagacttgaatata 19861107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 28995206 - 28995159
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  28995206 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 28995159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 32237893 - 32237838
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||| || |||||||||||||||  |||||||| ||||||||||||||||||||    
T  32237893 agtgcacattcaatcaatgactttgatgttgtccacgttgcagatccgaagacatg 32237838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 530
Target Start/End: Original strand, 45047684 - 45047751
Alignment:
Q  463 ttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||| |||||||||  |||||||||||| |||||||| | ||||||||||||| | |||||||||    
T  45047684 ttagtgcggtgtttattttattcagattgaaagattagcttttagcaagtgcagattcgatcaatgac 45047751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 45664438 - 45664485
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  45664438 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 45664485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 25373979 - 25373901
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||| |||||||||||||| ||| || || |||||||||||| ||| |||||||||   ||||||||||||||    
T  25373979 agtgcatatctaatcaatgactttgacgtcgttcacgttgcagatccggagatatgagtattccagagacttgaatata 25373901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 556
Target Start/End: Complemental strand, 47914490 - 47914444
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatcc 556  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||    
T  47914490 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatcc 47914444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 571
Target Start/End: Complemental strand, 22893612 - 22893551
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||||| ||||||||||||||||||||| || ||||||  |||||| ||||| |||||    
T  22893612 agtgcagatctaatcaatgactttggcgttgttcacgttgcaagtccgaatacatgggtatt 22893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 20203139 - 20203059
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||| |||||  |||| |||||| || || |||||||| ||||  ||||| || ||||||    
T  20203139 caagtgcagatccaatcaatgacttcggcgtcttccacgttgcaaattcggagacatgattatttcggagatttaaatata 20203059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 585
Target Start/End: Original strand, 27831287 - 27831391
Alignment:
Q  481 gattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagact 580  Q
    |||||||||||   ||| |||| ||| | |||||||||| |||| ||||||||||||| ||||| | || ||||||| ||||| | |||||  |||||||    
T  27831287 gattcagattgtcagatcagctttgatctagtgcagatctaatccatgactttggcgtcgtccacgctgtagatccggagacacgggtattccggagact 27831386  T
Q  581 tgaat 585  Q
    |||||    
T  27831387 tgaat 27831391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 34767201 - 34767281
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| ||| ||||| ||||| || |||||  ||||| ||||| ||||||| |||||  |||||||||||||||    
T  34767201 caagtgcagatctaattaatgattttggtgtcgtccacattgcatatccggagacatgggtattccggagacttgaatata 34767281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 562
Target Start/End: Complemental strand, 43839414 - 43839362
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagac 562  Q
    |||||||||||||||||| ||| ||||||  |||| |||||||||||||||||    
T  43839414 agtgcagatccaatcaataactctggcgtcatccacgttgcagatccgaagac 43839362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 13701964 - 13701893
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||| |||||| ||||||||| ||||||  ||||| |||||||| |||||||||||| |||  |||||||||    
T  13701964 cgtcctagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcaaatctgatcaatgac 13701893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 559
Target Start/End: Complemental strand, 20044798 - 20044711
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaa 559  Q
    |||||||| ||||||| ||| | |||||| | |||||||||||| || |||||||| | |||| ||| ||| | ||||||||||||||    
T  20044798 tgtttatttgattcaggttggaagattagttttgagcaagtgcatattcaatcaatcattttgacgtcgtcaacgttgcagatccgaa 20044711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 536
Target Start/End: Original strand, 31348615 - 31348690
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggc 536  Q
    ||||| ||||||||||| | |||| || |||||  ||||||| ||| ||||| |||||| ||||||||||||||||    
T  31348615 tcttaatgcagtgtttaattgatttaggttgaaaaattagctttgatcaagtccagatctaatcaatgactttggc 31348690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 33977822 - 33977775
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  33977822 agtgcagatccaatcaatgactttggtgtcatccacgttgcagatccg 33977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 530
Target Start/End: Complemental strand, 34103706 - 34103640
Alignment:
Q  463 ttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||| ||||||||| ||||||| | ||| |||||| | ||||||||||||||||| |||||||||    
T  34103706 ttagtgcggtgtttatttgattcaggtcgaaagattagat-tgagcaagtgcagatccgatcaatgac 34103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 43029900 - 43029947
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  43029900 agtgcagatccaatcaatgactttggagtcatccacgttgcagatccg 43029947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 565
Target Start/End: Original strand, 21803749 - 21803803
Alignment:
Q  511 gtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    ||||| |||||||||||||||||| |||  |||| |||||||||||| |||||||    
T  21803749 gtgcaaatccaatcaatgactttgacgtcatccacgttgcagatccggagacatg 21803803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 588
Target Start/End: Complemental strand, 41868264 - 41868151
Alignment:
Q  481 gattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatg 574  Q
    ||||||| ||||| |||||| | ||||||||||||||||| ||      |||||||||| || | ||| | |||||||| ||| |||||||||||||       
T  41868264 gattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgacaatgactttagcatcgtcaacgttgcagaaccggagacatgagtatttct 41868165  T
Q  575 gagacttgaatata 588  Q
    ||||||||||||||    
T  41868164 gagacttgaatata 41868151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 565
Target Start/End: Original strand, 11846767 - 11846820
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||| ||||||||||||| ||||||||  |||| |||||||||||| |||||||    
T  11846767 tgcatatccaatcaatgattttggcgtcatccacgttgcagatccggagacatg 11846820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 22286648 - 22286603
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatc 555  Q
    ||||||||||||||||||||||||| |||  |||| ||||||||||    
T  22286648 agtgcagatccaatcaatgactttgacgtcatccacgttgcagatc 22286603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 25939376 - 25939331
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatc 555  Q
    ||||||||||||||||||||||||||||| ||| | ||| ||||||    
T  25939376 agtgcagatccaatcaatgactttggcgtagtcaacgttacagatc 25939331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 588
Target Start/End: Complemental strand, 40461887 - 40461814
Alignment:
Q  515 agatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||| ||||| ||||  ||||||||| | ||||||| |||| |  ||||||||||||||    
T  40461887 agatccaatcaatgaatttagcgttttccaccttgcagatctggagacatgggtatcacagagacttgaatata 40461814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 492
Target Start/End: Original strand, 40716401 - 40716434
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattga 492  Q
    ||||||||||||||||||||||||||||| ||||    
T  40716401 cgtcttagtgcagtgtttattagattcaggttga 40716434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 588
Target Start/End: Complemental strand, 4206454 - 4206382
Alignment:
Q  516 gatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||||||||||| ||| | |||| ||||| | |||||| ||||||  |||||| ||||||||    
T  4206454 gatccgatcaatgactttggcgtcgtcaacgttgtagatcgggagacataagtatttcggagacatgaatata 4206382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 586
Target Start/End: Original strand, 33069871 - 33069947
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaata 586  Q
    |||||||||||||||||| |||||| ||| ||| || ||||| |||| |||| |||| ||||   ||||||||||||    
T  33069871 agtgcagatccaatcaataactttgacgtcgtcaatattgcaaatccaaagaaatgactatttcagagacttgaata 33069947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 5814511 - 5814641
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||| | |||||||||||||||||  || | |||||||||||     
T  5814511 tcgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagattcgatcaatgactttggcgtcatcaacgttgcagatcca 5814610  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     ||||||||||||| ||||||||||||||||    
T  5814611 gagacatgagtattctggagacttgaatata 5814641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 459 - 566
Target Start/End: Original strand, 8712696 - 8712803
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||| | |||||||||||      
T  8712696 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccag 8712795  T
Q  559 agacatga 566  Q
    ||||||||    
T  8712796 agacatga 8712803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 38944103 - 38943968
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| || ||||| ||||||||||||||||| ||      ||||||||||||||||||| | |||||||    
T  38944103 cgtcttagtgcggtgtttatttgattcaggttgaaagaatagctttgagcaagtgcagatccgatcaaggacaatgactttggcgttgtcaacgttgcag 38944004  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||| |||||||  |||||| ||||||||    
T  38944003 atccggagacacgagtattccggagacatgaatata 38943968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 13586195 - 13586077
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||      |||||||| ||| | |||||||    
T  13586195 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgattttggcgtagtcaacgttgcag 13586096  T
Q  553 atccgaagacatgagtatt 571  Q
    ||| |||||||||||||||    
T  13586095 atcagaagacatgagtatt 13586077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 510 - 587
Target Start/End: Original strand, 12519873 - 12519950
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||| ||||||||||||| || ||||||||||||    
T  12519873 agtgcagatccaatcaatgacattagcgtcgtccatgttgcagatccggagacatgagtattctgaagacttgaatat 12519950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 12717072 - 12716943
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||| |||  |||||||||||  || |||||||||||||| ||    ||||||||||| |    
T  12717072 cgtcttagtgcggtgtttatttgattcaggttgaaggattagctttgattaagtgcagatctgattaatgactttggcgtcgtagccgttgcagatccaa 12716973  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    |||||||| |||| | ||||||| ||||||    
T  12716972 agacatgaatattctagagactttaatata 12716943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 31522111 - 31522247
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||||||||||||||||||||| ||||||| ||||| |||||| | ||||||||||||||||| ||      |||||||||||||||  || | ||||||    
T  31522111 tcgtcttagtgcagtgtttatttgattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgacaatgactttggcgtcatcaacgttgca 31522210  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||||||||  | |||| ||||||||    
T  31522211 gatccggagacatgagtattccgaagacatgaatata 31522247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 55600490 - 55600381
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||| | ||||||||| ||||| | ||||| |||||||| |||||||| ||||||||||||||||| ||| |||| ||| | |||||||||||| ||    
T  55600490 tcttagtacggtgtttatttgattccgcttgaaagattagctttgagcaagcgcagatccaatcaatgattttagcgtcgtcaacgttgcagatccggag 55600391  T
Q  561 acatgagtat 570  Q
    ||||||||||    
T  55600390 acatgagtat 55600381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 6082366 - 6082250
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| |||| || ||||| |||||||| ||||||||||||||| |  ||||||| |||||| | ||| | |||||||||||| | |||||||||||    
T  6082366 tgtttatttgatttaggttgaaagattagctttgagcaagtgcagattcggtcaatgattttggcatcgtcaacgttgcagatccggaaacatgagtatt 6082267  T
Q  572 atggagacttgaatata 588  Q
     ||||||||||||||||    
T  6082266 ctggagacttgaatata 6082250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 6882122 - 6882257
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg------actttggcgttgtccatgttgcag 552  Q
    ||||||| ||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||      |||||| ||| ||| | |||||||    
T  6882122 cgtcttaatgcggtgtttatttgattcaggttgaaagattagctatgagcaagtgcagatccgatcaatgacaataactttgtcgtcgtcaacgttgcag 6882221  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||| |  ||||||||||||||    
T  6882222 atccggagacatgagtataacagagacttgaatata 6882257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 36124303 - 36124168
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||| || | ||      ||||||||||||||||||| | |||||||    
T  36124303 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaattcgatcaatgacaatgactttggcgttgtcaacgttgcag 36124204  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| | |||||||||||  |||||| ||||||||    
T  36124203 atccggaaacatgagtattcgggagacatgaatata 36124168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 460 - 588
Target Start/End: Original strand, 6911847 - 6911981
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcaga 553  Q
    |||||||||||||||||||| ||||||| ||||| |||||||| ||| |||| |||||||| ||      ||||||||||||||| ||| |||||| |||    
T  6911847 gtcttagtgcagtgtttatttgattcaggttgaaagattagctttgaacaagagcagatccgatcaatgacaatgactttggcgtcgtcaatgttgtaga 6911946  T
Q  554 tccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||||||| |||   ||||||||||||||    
T  6911947 tccggagacatgaggattccagagacttgaatata 6911981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 460 - 588
Target Start/End: Original strand, 22757261 - 22757395
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat------gactttggcgttgtccatgttgcaga 553  Q
    |||||||||| ||||||||| ||||||| ||||| |||||||| ||||||| ||||||||| ||||||      ||||||||||| ||| | |||||| |    
T  22757261 gtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaaatgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcaaa 22757360  T
Q  554 tccgaagacatgagtattatggagacttgaatata 588  Q
    |||| |||||||||||||  |||||| ||||||||    
T  22757361 tccggagacatgagtattccggagacatgaatata 22757395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 26674538 - 26674656
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  ||| ||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  26674538 cgtcttagtgtcgtgcttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 26674637  T
Q  553 atccgaagacatgagtatt 571  Q
    |||||||||||||||||||    
T  26674638 atccgaagacatgagtatt 26674656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 7060489 - 7060624
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg------actttggcgttgtccatgttgcag 552  Q
    ||||||| ||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||      ||||||||||  || | |||||||    
T  7060489 cgtcttaatgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaattactttggcgtcatcaacgttgcag 7060588  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||  |||||||||||||  |||||| ||||||||    
T  7060589 atccagagacatgagtattccggagacatgaatata 7060624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 26742418 - 26742283
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||| |||||| ||      |||||||||||| || ||| | |||||||    
T  26742418 cgtcttagtgcggtgtttatttgattcagattgaaagattagctttgagcaagtgtagatccgatcaatgacaatgactttggagtcgtcaacgttgcag 26742319  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||| | | ||||| ||||| ||||||| ||||||||    
T  26742318 atctggacacatgggtattttggagacatgaatata 26742283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 42197719 - 42197854
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || ||||||||||||||||| ||      |||||||||||| || ||| | ||||||     
T  42197719 cgtcttagtgcggtgtttatttgattcaggttgaaagattatctttgagcaagtgcagatccgatcgatgacaatgactttggtgtcgtcaacgttgcaa 42197818  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| ||||||||    
T  42197819 atccggagacatgagtattccggagacatgaatata 42197854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 56236762 - 56236666
Alignment:
Q  474 tttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    |||||| ||||||  ||||| ||||| || |||||||| |||||||| ||||||||||||||||| ||| | |||||||||||| ||||||||||||    
T  56236762 tttatttgattcaagttgaaagattaactttgagcaagcgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccggagacatgagtat 56236666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 477967 - 477896
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| |||||  ||||||| |||||||||||||||||||||||||||    
T  477967 cgtcttagtgcggtgtttatttgattcaggttgaaaaattagctttgagcaagtgcagatccaatcaatgac 477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 569
Target Start/End: Original strand, 29923001 - 29923117
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||| | ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||| || ||| |||||||||    
T  29923001 cgtcttagtacggtgtttatttgattcaggttgaaagattagctatgagcaagtgcagatccgatcaatgacaatgactttggtgtcgtcaatgttgcag 29923100  T
Q  553 atccgaagacatgagta 569  Q
    ||||| | |||||||||    
T  29923101 atccggaaacatgagta 29923117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 394229 - 394094
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || |||||||||| |||||| ||      |||||||||| |||| ||| | |||||||    
T  394229 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgtagatccgatcaatgacaatgactttagcgtcgtcaacgttgcag 394130  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    | ||| |||||||||||||  |||||| ||||||||    
T  394129 aaccggagacatgagtattccggagacatgaatata 394094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 24611755 - 24611620
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgca 551  Q
    |||||||||||| ||||| ||| ||||||| ||||| ||||| || ||||||||||||||||    ||||  ||||||||||||||| ||| | ||||||    
T  24611755 tcgtcttagtgcggtgtt-atttgattcaggttgaaagattaactttgagcaagtgcagatctgatcaatgacaatgactttggcgtcgtcaacgttgca 24611657  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
     ||| |||||||| ||||||  |||||||||||||||    
T  24611656 aatctgaagacataagtattccggagacttgaatata 24611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 27394996 - 27395131
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| | ||||||||||||||| ||      ||||||||||||||| ||| |||| ||||    
T  27394996 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttaagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaatgtagcag 27395095  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    |   | |||||||||||||  |||||| ||||||||    
T  27395096 acatggagacatgagtattccggagacatgaatata 27395131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 588
Target Start/End: Original strand, 30202208 - 30202339
Alignment:
Q  463 ttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat------gactttggcgttgtccatgttgcagatcc 556  Q
    ||||||||||| ||||| ||||||  |||||  ||||||| |||| ||||||| |||| ||||||      ||||||||||| ||| | |||||||||||    
T  30202208 ttagtgcagtggttatttgattcaagttgaaaaattagctttgaggaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaacgttgcagatcc 30202307  T
Q  557 gaagacatgagtattatggagacttgaatata 588  Q
    | |||||||| |||| ||||||||||||||||    
T  30202308 ggagacatgattattctggagacttgaatata 30202339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 43244336 - 43244201
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||||||  |||||  ||||| |||||||| |||||||||||| |||| ||      ||||||||||||| | ||| | |||||||    
T  43244336 cgtcttagtgcggtgtttatttcattcaagttgaaagattagctttgagcaagtgcatatccgatcaatgacaatgactttggcatcgtcaacgttgcag 43244237  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| ||||||||    
T  43244236 atccggagacatgagtatttcggagacatgaatata 43244201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 13965726 - 13965797
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| |||| || ||||| |||||||| ||||||||||||||||| |||||||||    
T  13965726 cgtcttagtgcggtgtttatttgatttaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 13965797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 19745555 - 19745673
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  |||||| || ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||| |||| ||| |||||||||    
T  19745555 cgtcttagtgaggtgtttgtttgattcaggttgaaagattagctttgagcaagtgcagatccgattaatgacaatgactttagcgtcgtcaatgttgcag 19745654  T
Q  553 atccgaagacatgagtatt 571  Q
    ||| | |||||||||||||    
T  19745655 atcgggagacatgagtatt 19745673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 19794251 - 19794133
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  |||||| || ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||| |||| ||| |||||||||    
T  19794251 cgtcttagtgaggtgtttgtttgattcaggttgaaagattagctttgagcaagtgcagatccgattaatgacaatgactttagcgtcgtcaatgttgcag 19794152  T
Q  553 atccgaagacatgagtatt 571  Q
    ||| | |||||||||||||    
T  19794151 atcgggagacatgagtatt 19794133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 20399858 - 20399787
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| |||||||||    
T  20399858 cgtcttagtgcggtgtttatttgattcagtttgaaagattagctttgagcaagtgcaaatccgatcaatgac 20399787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 533
Target Start/End: Original strand, 24789354 - 24789429
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgacttt 533  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||| ||| ||| ||||||| ||| ||||||||||    
T  24789354 tcgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgatcaaatgcagattcaaccaatgacttt 24789429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 533
Target Start/End: Complemental strand, 24818905 - 24818830
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgacttt 533  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||| ||| ||| ||||||| ||| ||||||||||    
T  24818905 tcgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgatcaaatgcagattcaaccaatgacttt 24818830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 24825815 - 24825886
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| || |||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  24825815 cgtcttagtgcggtctttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 24825886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 588
Target Start/End: Complemental strand, 626500 - 626370
Alignment:
Q  464 tagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagat----ccaat--caatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||| ||||||||| ||||||| ||||| |||||||| |||||||||||||||    |||||  |||||||||||| || ||| |  ||||||||| |    
T  626500 tagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgaccaatgacaatgactttggtgtcgtcgacattgcagatctg 626401  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||  |||||| | ||||||    
T  626400 aagacatgagtattccggagacataaatata 626370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 4959471 - 4959393
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||| ||||||| |||||  | |||||||||||||    
T  4959471 agtgcagatccaatcaatgactttggcgtcgtcagcgttgcagatccggagacatgggtattccgtagacttgaatata 4959393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 52555637 - 52555559
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||||||  |||||||||||||| || |||||||| ||||  ||||| || ||||||    
T  52555637 agtgcagatccaatcaatgactttggcgtcatccatgttgcagattcggagacatgactattccggagatttaaatata 52555559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 510 - 587
Target Start/End: Original strand, 28990515 - 28990592
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    |||||| ||||||||||||| |||| ||| ||||| |||||||||| ||||||||| ||||| ||||||||| |||||    
T  28990515 agtgcatatccaatcaatgattttgacgtcgtccacgttgcagatctgaagacatgtgtattctggagactttaatat 28990592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 24100305 - 24100377
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||  ||||||||| ||||||| ||||| |||||||| |||||||||| |||||| |||||||||    
T  24100305 tcgtcttagtgtggtgtttatttgattcaggttgaaagattagctttgagcaagtgtagatccgatcaatgac 24100377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 24568668 - 24568534
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  ||||||||| ||||||| ||||| |||||||| |||| |||||||||||| ||      ||||||| ||||| | ||| | |||||||    
T  24568668 cgtcttagtggggtgtttatttgattcaggttgaaagattagctttgagaaagtgcagatccgatcaatgacaatgacattggcctcgtcaacgttgcag 24568569  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| ||||||||    
T  24568568 atccg-agacatgagtatttcggagacatgaatata 24568534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 471 - 588
Target Start/End: Original strand, 51152302 - 51152425
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    ||||||||| ||||||| |||||  ||||||| ||||||||||||||||| ||      ||||||||||||| | ||| | |||||||||||| ||| ||    
T  51152302 gtgtttatttgattcaggttgaaaaattagctttgagcaagtgcagatccgatcaatgacaatgactttggcatcgtcaacgttgcagatccggagatat 51152401  T
Q  565 gagtattatggagacttgaatata 588  Q
    |||||||  |||||| ||||||||    
T  51152402 gagtattccggagacatgaatata 51152425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 7861161 - 7861090
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || | ||||||||||||||| |||||||||    
T  7861161 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttaagcaagtgcagatccgatcaatgac 7861090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 32616814 - 32616743
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||  ||||| |||||||| ||||||||||||||||  |||||||||    
T  32616814 cgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagatctgatcaatgac 32616743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 37869314 - 37869259
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  37869314 agtgcaaatccaatcaatgactttggcgtcatccacgttgcagatccgaagacatg 37869259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 39837761 - 39837832
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| |||||  ||| ||| ||||||||||||||||| |||||||||    
T  39837761 cgtcttagtgcggtgtttatttgattcaggttgaaatatttgctttgagcaagtgcagatccgatcaatgac 39837832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 53647798 - 53647869
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| |||||  |||| || ||||||||||||||||| |||||||||    
T  53647798 cgtcttagtgcggtgtttatttgattcaggttgaaaaattaactttgagcaagtgcagatccgatcaatgac 53647869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 580
Target Start/End: Complemental strand, 26576400 - 26576330
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagact 580  Q
    |||||||||| ||||||||||||||| || ||| | | ||||||||||||||||||||||||  |||||||    
T  26576400 agtgcagatcaaatcaatgactttggagtcgtcaacgatgcagatccgaagacatgagtattccggagact 26576330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 29589258 - 29589180
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| | ||||||||||||| ||  || | |||||||||||| ||||||||||||| ||||||||| ||||||    
T  29589258 agtgcagatcaactcaatgactttggagtcttcaacgttgcagatccggagacatgagtattctggagacttaaatata 29589180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 44756995 - 44756862
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||| ||||||||| ||||||| ||||| ||| |||  ||||||||||||||||| ||      || ||||||||||||  || | |||||||||    
T  44756995 tcttagtgcggtgtttatttgattcaggttgaaagatcagcattgagcaagtgcagatccgattaatgacagtgactttggcgtcttcaacgttgcagat 44756896  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
     || |||| ||||||||  |||||||||||||||    
T  44756895 tcggagacttgagtattccggagacttgaatata 44756862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 22049359 - 22049247
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcag-attgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||| |||||||||  ||| || ||||||| |||| || | ||||||||||||||| |||||||||||||| || | | | ||| |||||| |    
T  22049359 cgtcttagtgcggtgtttattttatttaggattgaag-attaactttaagcaagtgcagatccgatcaatgactttggagtcgccaacgttacagatcag 22049261  T
Q  558 aagacatgagtatt 571  Q
    ||||||||||||||    
T  22049260 aagacatgagtatt 22049247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 39523574 - 39523647
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattag-ctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||||  | ||||||||||||||||| |||||||||    
T  39523574 tcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagatccgatcaatgac 39523647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 571
Target Start/End: Original strand, 42972255 - 42972316
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    ||||||||||||||||||||||||| |||  |||| |||||||||||| |||||||| ||||    
T  42972255 agtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggagacatgactatt 42972316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 44021478 - 44021398
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatga--gtattatggagacttgaatata 588  Q
    |||||||||||||| |||||||||| ||| ||||| |||||||||||| ||||||||  ||||| | |||||| |||||||    
T  44021478 agtgcagatccaattaatgactttgacgtcgtccacgttgcagatccggagacatgaatgtattctagagactcgaatata 44021398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 587
Target Start/End: Complemental strand, 46386671 - 46386594
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    ||||| ||||||||||||||||||||||||||| | |||||||||||  | |||| |||||| | |||||||| ||||    
T  46386671 agtgctgatccaatcaatgactttggcgttgtcaacgttgcagatccagatacataagtattctagagacttgtatat 46386594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 531 - 587
Target Start/End: Complemental strand, 29266762 - 29266706
Alignment:
Q  531 tttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    |||||||| ||| | |||||||||||| ||||||||||||| |||||||||||||||    
T  29266762 tttggcgtcgtcaacgttgcagatccggagacatgagtattctggagacttgaatat 29266706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 517 - 588
Target Start/End: Complemental strand, 29577012 - 29576940
Alignment:
Q  517 atccaatcaa-tgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||| |||||||| ||| | ||||||||||||||||||||| ||||  |||||||||||||||    
T  29577012 atccaatcaaatgattttggcgtcgtcaacgttgcagatccgaagacatgaatattccggagacttgaatata 29576940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 562
Target Start/End: Original strand, 3159160 - 3159263
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    |||||||||||  |||||||| || |||| ||||| | |||||| |||||||||||| |||| |||||||| ||| ||||  || | ||||||||||||     
T  3159160 cgtcttagtgcgatgtttatttgaatcaggttgaaaggttagctttgagcaagtgcatatccgatcaatgattttagcgtcatcaacgttgcagatccgg 3159259  T
Q  559 agac 562  Q
    ||||    
T  3159260 agac 3159263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 588
Target Start/End: Complemental strand, 6789770 - 6789695
Alignment:
Q  513 gcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||| |  ||||||||||||||  ||||||||   |||||| ||||||| ||||||    
T  6789770 gcagatccaatcaatgactttggcatcatccatgttgcagattagaagacatttatattatagagactttaatata 6789695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 588
Target Start/End: Complemental strand, 7083750 - 7083632
Alignment:
Q  476 tattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagatccgaagacatgagta 569  Q
    |||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||| || ||| | |||||||||| | |||||||||||    
T  7083750 tatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggtgtcgtcaacgttgcagatctggagacatgagta 7083651  T
Q  570 ttatggagacttgaatata 588  Q
    ||  |||||| | ||||||    
T  7083650 ttccggagacataaatata 7083632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 20887711 - 20887641
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||  |||||||| ||||||||||||| |||||||| ||||||| |||| |||| |||||||||    
T  20887711 cgtcttagtgcgatgtttatt-gattcagattgaaagattagctttgagcaaatgcaaatccgatcaatgac 20887641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 23067745 - 23067690
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| ||||||||| || |||||||    
T  23067745 agtgcagatccaatcaatgactttggcgtcatccacgttgcagattcggagacatg 23067690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 25658333 - 25658451
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||||||||  |||||||| |||| |  ||||| |||||||| ||||||||||||||||| ||      ||||||||||||||| ||| | ||||||     
T  25658333 cgtcttagtgcgatgtttatttgatttatgttgaaagattagctttgagcaagtgcagatccgatcaacgacaatgactttggcgtcgtcaacgttgcac 25658432  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| | |||||||||||    
T  25658433 atccggatacatgagtatt 25658451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 29268732 - 29268661
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||  || |||| |||||||||||||| |||||||    
T  29268732 cgtcttagtgcggtgtttatttgattcaggttgaaagattgactttgaggaagtgcagatccaaccaatgac 29268661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 30470020 - 30469973
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  30470020 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 30469973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 46716791 - 46716744
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  46716791 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 46716744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 50801383 - 50801454
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||  | ||||||||||||||||  |||||||||    
T  50801383 cgtcttagtgctgtgtttatttgattcaggttgaaagattaattttgagcaagtgcagatctgatcaatgac 50801454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 529
Target Start/End: Original strand, 2447966 - 2448036
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatga 529  Q
    ||||||||||| ||||||||| |||| |  ||||| ||||| || ||||||||||||||| ||||||||||    
T  2447966 cgtcttagtgcggtgtttatttgatttatgttgaaagattaactttgagcaagtgcagattcaatcaatga 2448036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 9662070 - 9662148
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||||| | |||||  |||| |||||| || ||||||    
T  9662070 agtgcagatgcaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatata 9662148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 29474225 - 29474147
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||||||||||| || ||| | |||||||||||| ||||||| |||||  |||| ||| ||||||    
T  29474225 agtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccggaggcttaaatata 29474147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 515
Target Start/End: Complemental strand, 43493240 - 43493186
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgca 515  Q
    ||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||    
T  43493240 tcttagtgctgtgtttatttgattcaggttgaaagattagctttgagcaagtgca 43493186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 45351023 - 45350890
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||  ||||||||| || |||  ||||| |||||||| ||| ||||||||||||  ||      ||||||||||||||| ||| ||||| |||||    
T  45351023 tcttagtgtggtgtttatttgactcaagttgaaagattagctttgatcaagtgcagatctgattaatgacaatgactttggcgtcgtcaatgttacagat 45350924  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||||||  |||||| | ||||||    
T  45350923 ccggagacatgagtattccggagacataaatata 45350890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 45360502 - 45360369
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||  ||||||||| || |||  ||||| |||||||| ||| ||||||||||||  ||      ||||||||||||||| ||| ||||| |||||    
T  45360502 tcttagtgtggtgtttatttgactcaagttgaaagattagctttgatcaagtgcagatctgattaatgacaatgactttggcgtcgtcaatgttacagat 45360403  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||||||  |||||| | ||||||    
T  45360402 ccggagacatgagtattccggagacataaatata 45360369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 8517411 - 8517279
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatcc-aat--caatgactttggcgttgtccatgttgcagatc 555  Q
    ||||||||||  ||||||||| |||| || ||||| |||||| | ||||||||||||||||| |||  |||||||||| | || ||| |  |||||||||    
T  8517411 cgtcttagtgtggtgtttatttgatttaggttgaaagattagttttgagcaagtgcagatccgaatgacaatgacttttgtgtcgtcaacattgcagatc 8517312  T
Q  556 cgaagacatgagtattatggagacttgaatata 588  Q
     | |||||| ||||||  |||||| ||||||||    
T  8517311 tggagacataagtatttcggagacatgaatata 8517279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 555
Target Start/End: Original strand, 32189196 - 32189241
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatc 555  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||    
T  32189196 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatc 32189241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 562
Target Start/End: Complemental strand, 7242662 - 7242614
Alignment:
Q  514 cagatccaatcaatgactttggcgttgtccatgttgcagatccgaagac 562  Q
    |||||||||| |||||||||||||| ||||| |||||||||||| ||||    
T  7242662 cagatccaataaatgactttggcgtcgtccacgttgcagatccggagac 7242614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 47704233 - 47704165
Alignment:
Q  520 caatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||| |||||| | |||||||||||  ||| |||||||||  | |||||||||||||    
T  47704233 caatcaatgactttggtgttgtcaacgttgcagatccagagatatgagtattccgaagacttgaatata 47704165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 4634500 - 4634547
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  4634500 agtgcagatccaatcaatgactttggtgtcatccacgttgcagatccg 4634547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 542
Target Start/End: Original strand, 22121624 - 22121695
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtc 542  Q
    ||||||||| ||||||  |||||  ||||||| |||||||||||| ||  ||||||||||||| ||||||||    
T  22121624 gtgtttatttgattcaagttgaaatattagctttgagcaagtgcatatttaatcaatgacttttgcgttgtc 22121695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 589
Target Start/End: Original strand, 31311689 - 31311764
Alignment:
Q  514 cagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatatat 589  Q
    |||||| ||| |||||||||| |||  |||| |||||||||||| ||||||  |||||  ||||||||||||||||    
T  31311689 cagatcaaattaatgactttgtcgtcatccacgttgcagatccggagacatatgtatttcggagacttgaatatat 31311764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 41486792 - 41486847
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||| ||||||||||||||||||||||  |||| |||||||||| | |||||||    
T  41486792 agtgcaaatccaatcaatgactttggcgtcatccacgttgcagatctggagacatg 41486847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 1657463 - 1657385
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||| ||||||||||||||| || ||| | |||||||||||| ||||||| |||||   ||||||| ||||||    
T  1657463 agtgcaaatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccagagacttaaatata 1657385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 14346648 - 14346726
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||| ||||||||||||||| || ||| | |||||||||||| || |||| ||||| | ||||||| ||||||    
T  14346648 agtgcaaatcaaatcaatgactttggagtcgtcaacgttgcagatccggagccatgtgtattctagagacttaaatata 14346726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 15729878 - 15729800
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||||| ||||| || ||| ||||||||||| || ||||||  |||||  |||||||| ||||||    
T  15729878 agtgcagatcaaatcaatgattttggagtcgtcaatgttgcagattcggagacataggtatttcggagacttaaatata 15729800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 38170057 - 38169979
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||||||||||||  || | |||||| ||||  |  ||||||||||  |||||||||||||||    
T  38170057 agtgctgatccaatcaatgactttggcgtcatcaacgttgcaaatcctgatgcatgagtattccggagacttgaatata 38169979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 40198501 - 40198371
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||  ||||||||| ||||||| ||||| ||||| || ||| ||| || |  ||| |||||| ||||||  || ||| | |||||| ||| |    
T  40198501 tcgtcttagtgtggtgtttatttgattcaggttgaaagattatctttgaacaaatgtatgtccgatcaatcactttgaggtcgtcaacgttgcaaatctg 40198402  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     ||| |||||||||||| | |||||||||||    
T  40198401 gagatatgagtattatgaaaacttgaatata 40198371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 586
Target Start/End: Complemental strand, 1645449 - 1645376
Alignment:
Q  513 gcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaata 586  Q
    |||||| ||||||||||||||  |||  ||||  |||||||| |||| ||||| |||||| |||||||||||||    
T  1645449 gcagattcaatcaatgactttcacgtcatccactttgcagattcgaatacatgggtattacggagacttgaata 1645376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 536
Target Start/End: Complemental strand, 13169384 - 13169319
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggc 536  Q
    ||||||||| ||||||||||||| |||||| | ||| |||||||| || ||||||| |||| ||||    
T  13169384 gtgtttatttgattcagattgaaagattagttttgatcaagtgcaaattcaatcaacgactgtggc 13169319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 565
Target Start/End: Complemental strand, 44375166 - 44375117
Alignment:
Q  516 gatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||  | || |||||||||||| |||||||    
T  44375166 gatccaatcaatgactttggcgtcatacacgttgcagatccggagacatg 44375117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 555
Target Start/End: Original strand, 53903798 - 53903843
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatc 555  Q
    |||||||||||||||||||||||||||||  |||| ||| ||||||    
T  53903798 agtgcagatccaatcaatgactttggcgtcatccacgttacagatc 53903843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 2945364 - 2945432
Alignment:
Q  520 caatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||| ||  |  ||||||||||| ||||||  |||||  |||||||||||||||    
T  2945364 caatcaatgactttggcgtcgttaacattgcagatccggagacataggtatttcggagacttgaatata 2945432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 586
Target Start/End: Original strand, 3169643 - 3169719
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaata 586  Q
    ||||||||| |||||||||||||| ||||  ||||  |||||||| ||||  |||| |||||  |||||||||||||    
T  3169643 agtgcagattcaatcaatgactttcgcgtcatccactttgcagattcgaatgcatgtgtattccggagacttgaata 3169719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 556
Target Start/End: Original strand, 22621610 - 22621694
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatcc 556  Q
    |||||||| ||||||| ||||| |||||| | | | |||||||| ||| |||||| ||||||| ||| ||| | |||||||||||    
T  22621610 tgtttatttgattcaggttgaaagattagtttttaacaagtgcaaatctaatcaaagactttgacgtcgtcaacgttgcagatcc 22621694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 588
Target Start/End: Original strand, 41837510 - 41837626
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||||| || ||   |||||| | |||||||| | || |||||||||| |||||||| ||| | |||| |||||   |||||||||||||    
T  41837510 tgtttatttgattcaggttaaaatgttagcttttagcaagtggatattcaatcaatgattttggcgtcgtcaacgttgtagatctagagacatgagtatt 41837609  T
Q  572 atggagacttgaatata 588  Q
      | |||||||||||||    
T  41837610 ccgaagacttgaatata 41837626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 5e-36; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 458 - 583
Target Start/End: Original strand, 42491058 - 42491183
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||  ||||||||| ||| ||| ||| ||||||||||||||    
T  42491058 tcgtcttagtgcggtgtttatttgattcagattgaaagattagctttgagcaagtgcagatcagatcaatgacgttgacgtcgtcaatgttgcagatccg 42491157  T
Q  558 aagacatgagtattatggagacttga 583  Q
    ||||||||||||||  ||||||||||    
T  42491158 aagacatgagtattccggagacttga 42491183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 47551261 - 47551390
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||| ||||| ||||||| | |||| || ||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||||     
T  47551261 cgtctcagtgctgtgtttaattgatttaggttgaaagattagctttgagcaagtgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccgg 47551360  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    | ||||||||||| ||||||||||||||||    
T  47551361 aaacatgagtattctggagacttgaatata 47551390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 14265450 - 14265585
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat------gactttggcgttgtccatgttgcag 552  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||||||      ||||||||||||||| | |||||||    
T  14265450 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgttgtcaacgttgcag 14265549  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||||||||||||    
T  14265550 atccggagacatgagtattccggagacttgaatata 14265585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 9298369 - 9298242
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||||| ||||||||| ||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||| | ||| | | |||||||||| ||    
T  9298369 tcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagatccgatcaatgactttggcatcgtcaacgatgcagatccggag 9298270  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    | |||||||||  |||||||||||||||    
T  9298269 atatgagtatttcggagacttgaatata 9298242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 32878874 - 32879003
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||| | ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||| || ||| | |||| |||||||     
T  32878874 cgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgactttggtgtcgtcaacgttgtagatccgg 32878973  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    |||||||||||||  | | |||||||||||    
T  32878974 agacatgagtattccgaaaacttgaatata 32879003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 12871789 - 12871916
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    |||||||||  |||||||| |||| || ||||| |||||||| ||||||||||||||| | ||||||||||||||| | ||| | |||||||||||  ||    
T  12871789 tcttagtgcgttgtttatttgatttaggttgaaagattagctttgagcaagtgcagattcgatcaatgactttggcatcgtcaacgttgcagatccagag 12871888  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    |||||||||||  |||||||||||||||    
T  12871889 acatgagtattccggagacttgaatata 12871916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 4870986 - 4870853
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||| ||||||||| |||||||||||||  ||||||| ||||||||||||||||| ||      ||||||||| ||||| ||| | |||| ||||    
T  4870986 tcttagtgcggtgtttatttgattcagattgaaaaattagctttgagcaagtgcagatccgatcaatgacaatgacttcggcgtcgtcaacgttgtagat 4870887  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| ||||||||||||| ||||||| ||||||||    
T  4870886 ccggagacatgagtattctggagacatgaatata 4870853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 587
Target Start/End: Original strand, 29938403 - 29938531
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||| |||||| ||||||||| |||| |  ||||| || ||||| ||| |||||||||||||||||||||||||||||||| || | |||||| |||||    
T  29938403 tcgtcctagtgcggtgtttatttgatttatgttgaaagaatagct-tgatcaagtgcagatccaatcaatgactttggcgttatcaacgttgcaaatccg 29938501  T
Q  558 aagacatgagtattatggagacttgaatat 587  Q
     ||||||||||||| | |||| ||||||||    
T  29938502 gagacatgagtattctagagatttgaatat 29938531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 460 - 588
Target Start/End: Complemental strand, 28399283 - 28399155
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaa 559  Q
    |||||| ||| || |||||| ||||||  |||||  ||||||| |||||||||||||||||||||||||||||| || ||||| |  ||||||||| |||    
T  28399283 gtcttaatgcggtatttatttgattcatgttgaaatattagctttgagcaagtgcagatccaatcaatgacttttgcattgtcaacattgcagatctgaa 28399184  T
Q  560 gacatgagtattatggagacttgaatata 588  Q
    ||| | ||||||  |||||||||||||||    
T  28399183 gacctaagtatttcggagacttgaatata 28399155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 45193583 - 45193448
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||| | ||||||||| || |||| ||||| |||||||| ||||||||||| ||||| |||||||||      |||||||| ||| | |||||||    
T  45193583 cgtcttagtacggtgtttatttgaatcaggttgaaagattagctttgagcaagtgctgatccgatcaatgacaatgattttggcgtcgtcaacgttgcag 45193484  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||||||| ||||||||| ||||||    
T  45193483 atccggagacatgagtattttggagacttaaatata 45193448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 29726552 - 29726434
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||| ||| ||||||| | ||||||| ||||| |||||||||||||||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  29726552 cgtcttaatgcggtgtttaattgattcaggttgaaagattagctctgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 29726453  T
Q  553 atccgaagacatgagtatt 571  Q
    | |||||||||||||||||    
T  29726452 aaccgaagacatgagtatt 29726434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 13969537 - 13969459
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||| ||| ||| | |||||||||||| ||||||||||||| |||| |||||||||||    
T  13969537 agtgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccggagacatgagtattctggaaacttgaatata 13969459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 33177495 - 33177417
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||| || ||| |  ||||| ||||| ||||||||||||||||||||||||||||||    
T  33177495 agtgcagatccaatcaatgactttggtgtcgtcaacattgcaaatccggagacatgagtattatggagacttgaatata 33177417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 42276523 - 42276656
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||| ||||||||| ||||||| ||||| |||||||| | ||||||||||||||| ||      ||||||||||||||| ||| | |||||||||    
T  42276523 tcttagtgcggtgtttatttgattcaggttgaaagattagctttaagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcagat 42276622  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
     || |||||||||||||  |||||| ||||||||    
T  42276623 tcggagacatgagtattccggagacatgaatata 42276656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 44517313 - 44517449
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac-------tttggcgttgtccatgttgca 551  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || |||||||||||| |||| |||||||||       |||||||| ||| | ||||||    
T  44517313 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcaaatccgatcaatgacaatgacttttggcgtcgtcaacgttgca 44517412  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||||||||  |||||| ||||||||    
T  44517413 gatccggagacatgagtattccggagacatgaatata 44517449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 588
Target Start/End: Complemental strand, 2513554 - 2513426
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaa 559  Q
    |||||||||| |||||| || |||||||| |||| ||||| || |||||  ||||| |||||||||||||||||   |   || | |||||||| |||||    
T  2513554 gtcttagtgcggtgtttgtttgattcagactgaaagattaactttgagcgggtgcatatccaatcaatgactttattgccatcaacgttgcagacccgaa 2513455  T
Q  560 gacatgagtattatggagacttgaatata 588  Q
     ||||||||||||||||||||||||||||    
T  2513454 aacatgagtattatggagacttgaatata 2513426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 15391207 - 15391072
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || |||||||||||| |||| ||      ||||||||||||||| ||| | |||||||    
T  15391207 cgtcttagtgcggtgtttatttgattcaggttgaaagattatctttgagcaagtgcatatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 15391108  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||| | |||||||||||||  |||||| ||||||||    
T  15391107 atctggagacatgagtattccggagacatgaatata 15391072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 18343779 - 18343913
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat------gactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||| |||| |||||||| ||||||      ||||||||||| ||| | |||||||    
T  18343779 cgtcttagtgcggtgtttatt-gattcaggttgaaagattagctttgaacaagagcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 18343877  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||||||||||    
T  18343878 atccggagacatgaggattccggagacttgaatata 18343913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 460 - 527
Target Start/End: Original strand, 8737517 - 8737584
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat 527  Q
    |||||||||||||||||||| ||||||| ||||| |||||||| |||| |||||||||||||||||||    
T  8737517 gtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagtaagtgcagatccaatcaat 8737584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 45750644 - 45750762
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| | ||||||||||||||| ||      |||||||||||||||  || | |||||||    
T  45750644 cgtcttagtgcggtgtttatttgattcaggttgaaagattagcttttagcaagtgcagatccgatcaatgacaatgactttggcgtcatcaacgttgcag 45750743  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| |||||||||||||    
T  45750744 atccggagacatgagtatt 45750762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 26097961 - 26097831
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||| | || |||||| ||||||| |||||  ||||||| ||||||||||||||| | || ||||||||| |||| ||| |  |||||||||||    
T  26097961 tcgtcttagtacggtatttatttgattcaggttgaaaaattagctttgagcaagtgcagattccattaatgacttttgcgtcgtcaacattgcagatccg 26097862  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     |||||||||| ||  || ||||||||||||    
T  26097861 gagacatgagttttccggtgacttgaatata 26097831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 587
Target Start/End: Original strand, 32301503 - 32301632
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||| ||| ||||||||| ||||||| ||||| |||||||| ||| ||||||   || |||| ||||| ||| || | ||| ||||||||||||||    
T  32301503 tcgtcttaatgcggtgtttatttgattcaggttgaaagattagctttgatcaagtgtttattcaataaatgaattttgcatcgtcaatgttgcagatccg 32301602  T
Q  558 aagacatgagtattatggagacttgaatat 587  Q
    || |||| |||||| ||| |||||||||||    
T  32301603 aaaacataagtattttggtgacttgaatat 32301632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 10627166 - 10627300
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||| |||||| ||||||||| ||||||| |||||| ||||||| ||||||||||||||||| ||      |||||||||||||||  || | |||||||    
T  10627166 cgtcatagtgcggtgtttatttgattcaggttgaag-attagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcttcaacgttgcag 10627264  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    || || |||||||||| || ||||||||| ||||||    
T  10627265 attcggagacatgagttttttggagactttaatata 10627300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 33486985 - 33486850
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| |||||  |||| || ||||||| |||| |||| |||||||||      ||||| || ||| |||||||||    
T  33486985 cgtcttagtgcggtgtttatttgattcaggttgaaaaattaactttgagcaaatgcaaatccgatcaatgacaatggctttggtgtcgtcaatgttgcag 33486886  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||  ||| || ||||||||    
T  33486885 atccgaagacatgagtattccggatacatgaatata 33486850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 51418150 - 51418285
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||| |||| ||||||||| ||||||| | ||| |||||||| |||||||||||| |||| ||      ||||||||||||||| ||| | |||| ||    
T  51418150 cgtctttgtgcggtgtttatttgattcaggtggaaagattagctttgagcaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaacgttgtag 51418249  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||  |||||| ||||||||||||||||    
T  51418250 atccggagacagaagtattctggagacttgaatata 51418285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 26771323 - 26771401
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||| ||||||  || ||| | ||||||||||||||||||||| ||||  |||||||||||||||    
T  26771323 agtgcagatccaatcaataactttgatgtcgtcaacgttgcagatccgaagacatgaatatttcggagacttgaatata 26771401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 460 - 529
Target Start/End: Complemental strand, 4882313 - 4882244
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatga 529  Q
    |||||||||| ||||||||| ||||||  ||||| |||||||| ||||||||||||||||| ||||||||    
T  4882313 gtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagatccgatcaatga 4882244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 510 - 571
Target Start/End: Complemental strand, 32539086 - 32539025
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| || ||||||| |||||    
T  32539086 agtgcaaatccaatcaatgactttggcgttgtccatattgcagattcggagacatgcgtatt 32539025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 510 - 571
Target Start/End: Complemental strand, 48654938 - 48654877
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||||| |||||| ||||    
T  48654938 agtgcagatccaatcaatgactttggcgtcattcatgttgcagatccgaaaacatgaatatt 48654877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 32784245 - 32784380
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| |||||||  |||| |||||||| |||||||||||| || | ||      |||||||||| |||| ||| | |||||||    
T  32784245 cgtcttagtgcggtgtttatttgattcaggctgaaagattagctttgagcaagtgcaaattcgatcaataacaatgactttagcgtcgtcaacgttgcag 32784344  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| | ||||||    
T  32784345 atccggagacatgagtattccggagacataaatata 32784380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 33938968 - 33938833
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaa------tgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||| ||||| | || || ||||| |||||||| ||||||||| |||||||||||||      |||||||| ||| ||| | ||| |||    
T  33938968 cgtcttagtgcggtgcttatttggtttaggttgaaagattagctttgagcaagtacagatccaatcaatgacaatgactttgtcgtcgtcaacgttccag 33938869  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| ||||||||    
T  33938868 atccggagacatgagtatttcggagacatgaatata 33938833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 472 - 580
Target Start/End: Complemental strand, 40862761 - 40862653
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||||||||||| |||||| | ||| || ||| | || |||||||||| |||||||| ||| | |||||||||||  |||||||||||||    
T  40862761 tgtttatttgattcagattgaaagattagttttgatcaggtgtaaatgcaatcaatgattttggcgtcgtcaacgttgcagatccagagacatgagtatt 40862662  T
Q  572 atggagact 580  Q
     || |||||    
T  40862661 ctgaagact 40862653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 3232954 - 3233025
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| |||| |||||||||||| |||||||||    
T  3232954 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagaaagtgcagatccgatcaatgac 3233025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 7995515 - 7995444
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||  ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| |||||||||    
T  7995515 cgtcttagtgtggtgtttatttgattcaggttgaaagattagctttgagcaagtgcatatccgatcaatgac 7995444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 17347763 - 17347834
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||||||||||||| |||| || ||||| |||||||| |||| |||||||||| | |||||||||    
T  17347763 cgtcttagtgcagtgtttatttgattaaggttgaaagattagctttgagtaagtgcagattcgatcaatgac 17347834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 21326690 - 21326745
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||| |||||||    
T  21326690 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatg 21326745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 27534863 - 27534998
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||   |||||||| ||||||| ||||| |||||||| ||| |||| |||||||    ||||  |||||||||| |||| ||| | |||||||    
T  27534863 cgtcttagtgtgatgtttatttgattcaggttgaaagattagctttgaacaagagcagatctgatcaataacaatgactttagcgtcgtcaacgttgcag 27534962  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||||||||||    
T  27534963 atccggagacatgaggattccggagacttgaatata 27534998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 28678085 - 28678014
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||| |||||| ||||||||| ||||||| |||||  ||||||| ||||||||||||||||| |||||||||    
T  28678085 cgtcctagtgcggtgtttatttgattcaggttgaaaaattagctttgagcaagtgcagatccgatcaatgac 28678014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 29205451 - 29205522
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| ||| |||| |||||||||| |||||| |||||||||    
T  29205451 cgtcttagtgcggtgtttatttgattcaggttgaatgatcagctttgagcaagtgtagatccgatcaatgac 29205522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 37822300 - 37822230
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||||| |||||| ||||||| ||||| ||||| || ||||||||||||||||| |||||||||    
T  37822300 cgtcttagtgcagtatttatttgattcaggttgaaagatta-ctttgagcaagtgcagatccgatcaatgac 37822230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 10304743 - 10304873
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||  ||||||||| ||||||  |||||  ||||||| |||| ||||| |||| |||||||||||||| || | ||| | ||||||||| ||    
T  10304743 tcgtcttagtgtggtgtttatttgattcaagttgaaatattagctttgagaaagtggagattcaatcaatgactttagcatcgtcaacgttgcagattcg 10304842  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     |||||||  ||||  | |||||||||||||    
T  10304843 gagacatggatattccgaagacttgaatata 10304873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 13999131 - 13999256
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||| |  |||||||| ||||||| ||| | ||||| || ||||||| ||||||| |||||||||||||||||| | || | ||     |||      
T  13999131 tcgtcttagtacgatgtttatttgattcaggttgtaagattaactttgagcaaatgcagattcaatcaatgactttggcgctatcaacgt-----atcta 13999225  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     ||||||||||||||||||||||||||||||    
T  13999226 gagacatgagtattatggagacttgaatata 13999256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 44513899 - 44513821
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||||||||||| || ||| | |||||||||||| ||||||| |||||  |||||||| ||||||    
T  44513899 agtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccggagacttaaatata 44513821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 44562646 - 44562568
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||||||  || | |||||||||||| |||||||| ||||  ||||| || ||||||    
T  44562646 agtgcagatccaatcaatgactttggcgtcatctacgttgcagatccggagacatgactattccggagatttaaatata 44562568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 508 - 565
Target Start/End: Complemental strand, 6212813 - 6212756
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||||  |||| |||| ||||||| |||||||    
T  6212813 caagtgcagatccaatcaatgactttggcgtcatccacgttgtagatccggagacatg 6212756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 571
Target Start/End: Complemental strand, 15276343 - 15276282
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||||||||||||||||||||||||  |||| |||||||||| | |||||||| ||||    
T  15276343 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatctggagacatgattatt 15276282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 13488491 - 13488356
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||||||  |||||| ||||| |||||||| ||| |||| |||||||| ||      ||||||||||||||| ||| | |||||||    
T  13488491 cgtcttagtgcggtgtttatttaattcaggttgaaagattagctttgaacaagagcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 13488392  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
     || | ||||||||| |||   ||||||||||||||    
T  13488391 gtctggagacatgaggattccagagacttgaatata 13488356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 24114621 - 24114505
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||||  ||||| ||||||   | ||||||||||||| ||||||||||||| |||||  || | ||||||| ||| ||||||||| ||||    
T  24114621 tgtttatttgattcaagttgaaagattagtgtttagcaagtgcagattcaatcaatgacttcggcgtattcaacgttgcagttccaaagacatgattatt 24114522  T
Q  572 atggagacttgaatata 588  Q
     | ||||||| ||||||    
T  24114521 gtagagactttaatata 24114505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 538
Target Start/End: Original strand, 13152634 - 13152685
Alignment:
Q  487 gattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgt 538  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||||    
T  13152634 gattgaaagattaactttgagcaagtgcagatccgatcaatgactttggcgt 13152685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 13869803 - 13869874
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| |||| || ||||| |||||| | ||| |||||| ||||||||||||||||    
T  13869803 cgtcttagtgcggtgtttatttgatttaggttgaaagattagttttgaacaagtgtagatccaatcaatgac 13869874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 512 - 571
Target Start/End: Original strand, 23257307 - 23257366
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||||||||||||||||||||||  |||| |||||||||||| | |||||| ||||    
T  23257307 tgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacatgattatt 23257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 533
Target Start/End: Complemental strand, 39080871 - 39080796
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgacttt 533  Q
    |||||||||||||||||||||| ||||||  || || |||||| | |||||||||| |||| |||||| |||||||    
T  39080871 tcgtcttagtgcagtgtttatttgattcatgttaaaagattagttttgagcaagtgtagattcaatcagtgacttt 39080796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 38646801 - 38646879
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||| ||||||||||||||||||  |||| |||||||||||| |||||||  |||| |||||| || ||||||    
T  38646801 agtgtagatcaaatcaatgactttggcgtcatccacgttgcagatccggagacatggttattctggagatttaaatata 38646879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 564
Target Start/End: Original strand, 47392353 - 47392407
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    |||| ||||||||| |||||||||||||| ||||| |||| ||||||||||||||    
T  47392353 agtgtagatccaataaatgactttggcgtcgtccacgttgtagatccgaagacat 47392407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 547 - 588
Target Start/End: Complemental strand, 6158897 - 6158856
Alignment:
Q  547 ttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||| || |||||||||||||    
T  6158897 ttgcagatccgaagacatgagtattctgaagacttgaatata 6158856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 571
Target Start/End: Complemental strand, 31427098 - 31426993
Alignment:
Q  466 gtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||| ||||||| ||||| ||||| || ||| ||||||||  | |||||||| ||||| |||| ||| | |||| |||| | || |||||    
T  31427098 gtgcagtgtttatttgattcaggttgaaagattaactttgatcaagtgcaacttcaatcaataacttttgcgtcgtcaacgttggagattcaaaaacatg 31426999  T
Q  566 agtatt 571  Q
    ||||||    
T  31426998 agtatt 31426993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 571
Target Start/End: Complemental strand, 25689784 - 25689684
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    |||||||||  |||||| ||||  |||||||| || | ||| ||| || ||||||||||||| ||||| ||| |  ||||||||| ||||||||||||||    
T  25689784 gtgtttattttattcaggttgatagattagctttgggaaagcgcatattcaatcaatgacttcggcgtcgtcaacattgcagatctgaagacatgagtat 25689685  T
Q  571 t 571  Q
    |    
T  25689684 t 25689684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 556
Target Start/End: Original strand, 31609957 - 31610005
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatcc 556  Q
    ||||||||||| |||||||||| |||||||||||| | |||||||||||    
T  31609957 caagtgcagattcaatcaatgattttggcgttgtcaacgttgcagatcc 31610005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 34659536 - 34659460
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||||| ||| |  ||||||||||| ||| ||| |||||    |||||||||||||    
T  34659536 tgcagatccaatcaatgactttggcgtcgtcaacattgcagatccggagatatgggtattccaaagacttgaatata 34659460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 40992520 - 40992576
Alignment:
Q  515 agatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||| |||||||||||||||||||  |||| |||||||||||| |||||||| ||||    
T  40992520 agatgcaatcaatgactttggcgtcatccacgttgcagatccggagacatgaatatt 40992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 14717167 - 14717120
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||||||| |||||||  |||| ||||||||||||    
T  14717167 agtgcagatccaatcaatgacattggcgtcatccacgttgcagatccg 14717120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 22344809 - 22344762
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||||||||||| |||  |||| ||||||||||||    
T  22344809 agtgcagatccaatcaatgactttgacgtcatccacgttgcagatccg 22344762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 538
Target Start/End: Complemental strand, 25033031 - 25032964
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgt 538  Q
    ||||||||| ||||||| |||   ||||| || |||||||||||| || |||||||||||||||||||    
T  25033031 gtgtttatttgattcaggttgtgagattaactttgagcaagtgcaaattcaatcaatgactttggcgt 25032964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 26199808 - 26199875
Alignment:
Q  521 aatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||  || ||| | | |||||||||||||||||  ||||||||||||||| ||||||    
T  26199808 aatcaatgactttgaagtcgtcaacgatgcagatccgaagacatacgtattatggagacttaaatata 26199875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 571
Target Start/End: Original strand, 28082305 - 28082416
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaa 559  Q
    ||||||| ||| |||||||| ||||||  |  || |||||| | ||| |||||||| || |||||||||||||| | |||||| | ||||||||| | ||    
T  28082305 gtcttagcgcaatgtttatttgattcatgtcaaaagattagttgtgatcaagtgcatattcaatcaatgacttttgtgttgtcaacgttgcagattcaaa 28082404  T
Q  560 gacatgagtatt 571  Q
     |||||||||||    
T  28082405 tacatgagtatt 28082416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 29069784 - 29069721
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttg 534  Q
    ||||||||| ||||||||||||| |||||  | ||| |||||||| || |||||||||||||||    
T  29069784 gtgtttatttgattcagattgaaagattaattttgatcaagtgcatattcaatcaatgactttg 29069721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 571
Target Start/End: Original strand, 30678434 - 30678533
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    ||||||||| ||| || ||||| |||||| | ||| ||| || ||||||||||||||| |||||||| ||| |   |||| |||||||||||||| ||||    
T  30678434 tgtttattaaatttaggttgaaagattagttttgatcaaatgtagatccaatcaatgattttggcgtcgtcaacactgcaaatccgaagacatgattatt 30678533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 36621569 - 36621624
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||| |||||||||||||||||||| |  |||| |||||||||||| |||||||    
T  36621569 agtgcaaatccaatcaatgactttggcatcatccacgttgcagatccggagacatg 36621624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 5832451 - 5832529
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| |||||||||||||| |||  |||| |||||||||| | |||||||| ||||  ||||| || ||||||    
T  5832451 agtgcagatctaatcaatgactttgacgtcatccacgttgcagatctggagacatgattattccggagatttaaatata 5832529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 538
Target Start/End: Original strand, 8937797 - 8937874
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgt 538  Q
    |||||| ||| ||||||||| |||||| |||||| |||||| | |||||||  | |||| |||||||||||||||||||    
T  8937797 gtcttaatgcggtgtttatttgattcaaattgaaagattagtt-tgagcaaaggtagattcaatcaatgactttggcgt 8937874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 565
Target Start/End: Original strand, 15698416 - 15698470
Alignment:
Q  511 gtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||| |||||||||||||||||||  |||| ||||||||||| || |||||    
T  15698416 gtgcagattcaatcaatgactttggcgtcatccacgttgcagatccaaaaacatg 15698470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 49772287 - 49772361
Alignment:
Q  496 attagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    ||||||| ||| ||| ||||||| |||  ||||||||| |||| ||| |||||||||||||||| | ||||||||    
T  49772287 attagctttgatcaaatgcagattcaactaatgacttttgcgtcgtcaatgttgcagatccgaaaatatgagtat 49772361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Complemental strand, 11877361 - 11877328
Alignment:
Q  504 tgagcaagtgcagatccaatcaatgactttggcg 537  Q
    |||||| |||||||||||||||||||||||||||    
T  11877361 tgagcaggtgcagatccaatcaatgactttggcg 11877328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 588
Target Start/End: Complemental strand, 35356446 - 35356373
Alignment:
Q  515 agatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||| || ||  || || |||||||||| |||||| |||||  || |||||||||||    
T  35356446 agatccaatcaatgactttggtgtcgttaatattacagatccgaaaacatgaatattacagacacttgaatata 35356373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 507
Target Start/End: Original strand, 20411738 - 20411786
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgag 507  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||    
T  20411738 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgag 20411786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 533
Target Start/End: Original strand, 29802794 - 29802866
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgacttt 533  Q
    ||||||||  ||||||||| |||||   ||||| || ||| | ||| ||||||||||||||||||||||||||    
T  29802794 tcttagtgtggtgtttatttgattcttgttgaaagagtagttttgatcaagtgcagatccaatcaatgacttt 29802866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 7e-32; HSPs: 90)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 5754453 - 5754583
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||| || ||| | ||||||||||||    
T  5754453 tcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgactttggtgtcgtcaacgttgcagatccg 5754552  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     |||||| ||||||  |||||| ||||||||    
T  5754553 gagacataagtattccggagacatgaatata 5754583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 44942452 - 44942587
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat------gactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| ||||||      ||||||||||| ||| | |||||||    
T  44942452 cgtcttagtgcggtgtttatttgattcagcttgaaagattagctttgagcaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 44942551  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||  |||||||||||||||    
T  44942552 atccgaagacatgagtattccggagacttgaatata 44942587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 11798478 - 11798348
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcaga-tccg 557  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| |||||| ||| |||||| |||||||||||| |||| ||| | |||||||| | ||    
T  11798478 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaggtgtagatccgatcaatgacttttgcgtcgtcaacgttgcagatttcg 11798379  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     ||||||||||||||||||||||||||||||    
T  11798378 gagacatgagtattatggagacttgaatata 11798348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 463 - 588
Target Start/End: Original strand, 34471136 - 34471261
Alignment:
Q  463 ttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagac 562  Q
    ||||||| || |||||| ||||||  ||||| ||||| || ||||||||||||||||||||||||||||||||||||||| | ||||||||||   ||||    
T  34471136 ttagtgcggtatttatttgattcatgttgaaagattaactttgagcaagtgcagatccaatcaatgactttggcgttgtcaacgttgcagatctagagac 34471235  T
Q  563 atgagtattatggagacttgaatata 588  Q
    |||||||||  |||||| ||||||||    
T  34471236 atgagtattccggagacatgaatata 34471261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 34963031 - 34962896
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||| | ||||||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  34963031 cgtcttagtgcggtgtttatttgattcaggttgaaagattagatttgagcaagtgcagatcctatcaatgacaatgactttggcgtcgtcaacgttgcag 34962932  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||| |||||| |||||||||    
T  34962931 atccgaagacatgaggattctggagatttgaatata 34962896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 6431355 - 6431228
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||||| ||||| ||| ||||||| ||||| ||||| || |||||||| |||||||  |||||||||||| |||| ||| |||||||||||| ||||    
T  6431355 tcttagtgcggtgttgatttgattcaggttgaaagattaactttgagcaagcgcagatctgatcaatgacttttgcgtcgtcaatgttgcagatctgaag 6431256  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    |||||||||||  |||||||| ||||||    
T  6431255 acatgagtattccggagacttaaatata 6431228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 471 - 588
Target Start/End: Original strand, 15920052 - 15920169
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    ||||||||| ||||||| |||||  ||||||| || |||||||||||||| ||||||||||||||||| ||| | |||||||||||| | ||||||||||    
T  15920052 gtgtttatttgattcaggttgaaatattagctttgtgcaagtgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccggaaacatgagtat 15920151  T
Q  571 tatggagacttgaatata 588  Q
    |  | |||||||||||||    
T  15920152 ttcgaagacttgaatata 15920169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 9978624 - 9978506
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||||||||      ||||||||  || | |||||||    
T  9978624 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccaatcaatgacaatgattttggcgtcatcaacgttgcag 9978525  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| |||||||||||||    
T  9978524 atccggagacatgagtatt 9978506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 10286962 - 10286844
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||| ||||||| | |||||||    
T  10286962 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttgacgttgtcaacgttgcag 10286863  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| |||||||||||||    
T  10286862 atccggagacatgagtatt 10286844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 17767513 - 17767386
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||| | ||| ||||| |||| || || || ||||| || ||||||||||||||||| |||||||||||  |||| ||| | |||||||||||| ||    
T  17767513 tcttagtacggtgcttatttgatttaggttaaaagattaactttgagcaagtgcagatccgatcaatgacttctgcgtcgtcaacgttgcagatccggag 17767414  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    ||||||||||||| ||||||||||||||    
T  17767413 acatgagtattattgagacttgaatata 17767386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 460 - 587
Target Start/End: Original strand, 4739496 - 4739629
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcaga 553  Q
    |||||||||| ||||||||| ||||||| ||||| |||||| | ||||||||||||||||| ||      ||||||||||||||| ||| | ||||||||    
T  4739496 gtcttagtgcggtgtttatttgattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcaga 4739595  T
Q  554 tccgaagacatgagtattatggagacttgaatat 587  Q
    |||| ||||||||||||  || ||||||||||||    
T  4739596 tccggagacatgagtatactgaagacttgaatat 4739629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 36868173 - 36868309
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgca 551  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| || |||||||||||| |||    ||||  ||||||||||||||| ||| | ||||||    
T  36868173 tcgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcaaatccgttcaatgacaatgactttggcgtcgtcaacgttgca 36868272  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||| | ||||||||||||| ||||||| ||||||||    
T  36868273 gatcaggagacatgagtattctggagacatgaatata 36868309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 588
Target Start/End: Original strand, 11426839 - 11426938
Alignment:
Q  489 ttgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||| ||||||| |||||||| |||| || |||||| ||| ||| |||||||||||||||||||||||||||| | ||||||| ||||||    
T  11426839 ttgaaagattagctttgagcaattgcagatctaatcgatcactttgacgtcgtcaatgttgcagatccgaagacatgagtattctagagacttaaatata 11426938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 4732236 - 4732371
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||  ||||| ||||| || |||||||||| |||||| |||||||||      ||| |||| ||| | |||||||    
T  4732236 cgtcttagtgcggtgtttatttgattcaagttgaaagattatctttgagcaagtgtagatccgatcaatgacaatgactttagcgtcgtcaacgttgcag 4732335  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||||||||||||    
T  4732336 atccggagacatgagtattccggagacttgaatata 4732371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 7582029 - 7581913
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||||| |||||  |||| || |||||||||||| || ||||||| ||||||| ||| ||| | |||| |||||||||||||||| ||||    
T  7582029 tgtttatttgattcaggttgaaatattatctttgagcaagtgcaaattcaatcaacgactttgacgtcgtcaacgttgtagatccgaagacatgaatatt 7581930  T
Q  572 atggagacttgaatata 588  Q
     ||||||||| ||||||    
T  7581929 ctggagacttcaatata 7581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 22597301 - 22597436
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatc------aatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||| ||| |||      |||||||||| | | ||| |||||||||    
T  22597301 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcaggtccgatcaatgataatgactttgacatcgtcaatgttgcag 22597400  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||  |||||||||||||  ||||||||| |||||    
T  22597401 atccagagacatgagtattccggagacttggatata 22597436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 12704853 - 12704988
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| |||| || ||||| |||||||| |||||||||||| |||    ||||  ||||||||||||||| ||| | | |||||    
T  12704853 cgtcttagtgcggtgtttatttgatttaggttgaaagattagctttgagcaagtgcatatcagatcaatcacaatgactttggcgtcgtcaacgctgcag 12704952  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    || || ||||||||||||| ||||||| ||||||||    
T  12704953 attcggagacatgagtattctggagacatgaatata 12704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 460 - 571
Target Start/End: Complemental strand, 13548855 - 13548745
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaa 559  Q
    |||||| ||| || |||||| ||||||| ||||| |||||||| ||| ||| ||||||| |||||||||||||| || ||||| | ||||||||||||||    
T  13548855 gtcttaatgcggtttttatttgattcaggttgaaagattagctttgatcaaatgcagattcaatcaatgacttttgcattgtcaacgttgcagatccgaa 13548756  T
Q  560 gacatgagtatt 571  Q
     |||||||||||    
T  13548755 -acatgagtatt 13548745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 45694399 - 45694272
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||| | ||||||||| || |||  ||||| ||||| || ||||||| |||||||| |||||||||||||  ||| ||| | |||||||||||||||    
T  45694399 tcttagtacggtgtttatttgactcatgttgaaagattatctttgagcaaatgcagatctaatcaatgactttaacgtcgtcaacgttgcagatccgaag 45694300  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    |||||| ||||   ||||||||||||||    
T  45694299 acatgaatattccagagacttgaatata 45694272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 563
Target Start/End: Complemental strand, 20124722 - 20124620
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||||  |||||||||  |||||| ||||| |||||||| |||||||||||| || | ||||||||||||||||| ||| | ||| |||||||||||    
T  20124722 tcttagtgtggtgtttatttcattcaggttgaaagattagctttgagcaagtgcaaattcgatcaatgactttggcgtcgtcaacgtttcagatccgaag 20124623  T
Q  561 aca 563  Q
    |||    
T  20124622 aca 20124620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 588
Target Start/End: Original strand, 43696035 - 43696169
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcaga 553  Q
    |||||||||| ||||||||| ||||||| |||||  ||||||| ||| ||||||||||||    ||||  |||||||||||||||  || | ||||||||    
T  43696035 gtcttagtgcggtgtttatttgattcaggttgaaaaattagctttgaacaagtgcagatctgatcaatgacaatgactttggcgtcatcaacgttgcaga 43696134  T
Q  554 tccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||  | |||| ||||||||    
T  43696135 tccgaagacatgagtattccgaagacatgaatata 43696169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 12891074 - 12891002
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||| |||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  12891074 tcgtcctagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 12891002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 28228441 - 28228517
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||   ||| ||||||||||    
T  28228441 tgcagatccaatcaatgactttggcgtcgcccacgttgtagatccgaagacatgagtatttcagaggcttgaatata 28228517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 28231052 - 28230917
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| ||| |||| ||||||||||||||||| ||      ||||||||||||||| ||| |  ||||||    
T  28231052 cgtcttagtgcggtgtttatttgattcaggttgaaagatcagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacattgcag 28230953  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||| | |||||||| |||| | ||||| ||||||||    
T  28230952 atctggagacatgaatattctagagacatgaatata 28230917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 564
Target Start/End: Original strand, 32314608 - 32314719
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg------actttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||  |||||||      |||||||||| ||| | |||||||    
T  32314608 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatctgatcaatgacaataactttggcgtcgtcaacgttgcag 32314707  T
Q  553 atccgaagacat 564  Q
    ||||| ||||||    
T  32314708 atccggagacat 32314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 38384412 - 38384277
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg------actttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||||||  |||||| ||||| |||||||| ||||||||||||||||| |||||||      ||||||||||  || |  ||||||    
T  38384412 cgtcttagtgcggtgtttattttattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaataactttggcgtcatcaacattgcag 38384313  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||| ||||||    
T  38384312 atccggagacatgaggattccggagacttaaatata 38384277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 3603202 - 3603257
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  3603202 agtgcagatccaatcaatgactttgacgtcatccatgttgcagatccgaagacatg 3603257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 4426613 - 4426542
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| || ||||||    
T  4426613 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgataaatgac 4426542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 18089352 - 18089281
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||  ||||| |||||||| ||||||||||||||||| |||||||||    
T  18089352 cgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagatccgatcaatgac 18089281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 35333671 - 35333742
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||| |||||| |||||||||    
T  35333671 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgtagatccgatcaatgac 35333742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 43474083 - 43474012
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||  |||||||||    
T  43474083 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatctgatcaatgac 43474012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 20036599 - 20036677
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||||||  ||| | |||||||||||||||||||| |||||  | ||||||| |||||    
T  20036599 agtgcagatccaatcaatgactttggcgccgtcaacgttgcagatccgaagacatgggtattccgtagacttggatata 20036677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 460 - 571
Target Start/End: Complemental strand, 31908770 - 31908654
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcaga 553  Q
    |||||||||| ||||||||| ||||||| ||||| | |||||| ||||||||||||||||| ||      ||||||||||||||| ||| | ||||||||    
T  31908770 gtcttagtgcggtgtttatttgattcaggttgaaag-ttagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcaga 31908672  T
Q  554 tccgaagacatgagtatt 571  Q
    |||| |||||| ||||||    
T  31908671 tccggagacataagtatt 31908654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 459 - 589
Target Start/End: Original strand, 41797760 - 41797893
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatcc----aat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  ||||||||| ||||||| |   | |||||||| |||||||||||||||||    |||  ||||||||||||| | ||| | |||||||    
T  41797760 cgtcttagtgtggtgtttatttgattcaggt---aagattagctttgagcaagtgcagatccgttcaatgacaatgactttggcatcgtcaacgttgcag 41797856  T
Q  553 atccgaagacatgagtattatggagacttgaatatat 589  Q
    |||||||||||||||||||   |||||||||||||||    
T  41797857 atccgaagacatgagtattccagagacttgaatatat 41797893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 13740616 - 13740480
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg------actttggcgttgtccatgttgca 551  Q
    ||||||||||||  |||||||| ||||||| ||||| |||||||| ||| ||||| |||||||||||||||      |||||| ||| ||| | ||||||    
T  13740616 tcgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgaacaagtacagatccaatcaatgacaattactttgacgtcgtcaacgttgca 13740517  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||  ||||  |||||| ||||||||    
T  13740516 gatccggagacatgcatatttcggagacatgaatata 13740480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 527
Target Start/End: Complemental strand, 823913 - 823845
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat 527  Q
    ||||||||||| ||||||||| |||||||||||||  ||||||| ||||||||| ||||| ||||||||    
T  823913 cgtcttagtgcggtgtttatttgattcagattgaaaaattagctttgagcaagttcagattcaatcaat 823845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 516 - 588
Target Start/End: Complemental strand, 2763419 - 2763347
Alignment:
Q  516 gatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||||||||||||  |||||| | |||||||||||||||||||||||||| | |||| |||||||||    
T  2763419 gatcgaatcaatgactttgttgttgtcaacgttgcagatccgaagacatgagtattttagagatttgaatata 2763347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 43929199 - 43929119
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||| |||||||||||||||||||  |||| |||||||||||| |||||||| ||||  ||||| || ||||||    
T  43929199 caagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatata 43929119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 4604262 - 4604191
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||  ||||||||| ||||||| ||||| || ||||| ||||||||||||||||| |||||||||    
T  4604262 cgtcttagtgtggtgtttatttgattcaggttgaaagactagctttgagcaagtgcagatccgatcaatgac 4604191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 7640253 - 7640198
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||| |||||||    
T  7640253 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatg 7640198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 28261843 - 28261772
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||| | |||||||| |||||||| |||||||||    
T  28261843 cgtcttagtgcggtgtttatttgattcaggttgaaagattagttttgagcaagagcagatccgatcaatgac 28261772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 589
Target Start/End: Original strand, 29734407 - 29734486
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatatat 589  Q
    |||||||||| ||||||||||||||| || ||| | |||| ||||||| |||||||||||||  |||||||| |||||||    
T  29734407 agtgcagatcaaatcaatgactttggagtcgtcaacgttgaagatccggagacatgagtattccggagacttaaatatat 29734486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 25622941 - 25622863
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||| ||||||||||||||| ||| ||| | ||| ||||| ||||||||||||||||  |||||||| ||||||    
T  25622941 agtgcagattcaatcaatgactttgacgtcgtcaacgttacagattcgaagacatgagtattccggagactttaatata 25622863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 521 - 586
Target Start/End: Complemental strand, 11550481 - 11550416
Alignment:
Q  521 aatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaata 586  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| ||||||  ||||||| ||||    
T  11550481 aatcaatgactttggcgtcgtcaacgttgcagatccgaagacatgggtattacagagactttaata 11550416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 569
Target Start/End: Complemental strand, 13878952 - 13878848
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    ||||||||| ||||||| ||||| ||||| || ||||||||||||||||| ||      ||||||||||||||| ||| | ||||||||||||  |||||    
T  13878952 gtgtttatttgattcaggttgaaagattaactttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcagatccggggacat 13878853  T
Q  565 gagta 569  Q
    |||||    
T  13878852 gagta 13878848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 569
Target Start/End: Complemental strand, 14019077 - 14018973
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    ||||||||| ||||||| ||||| ||||| || ||||||||||||||||| ||      ||||||||||||||| ||| | ||||||||||||  |||||    
T  14019077 gtgtttatttgattcaggttgaaagattaactttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcagatccggggacat 14018978  T
Q  565 gagta 569  Q
    |||||    
T  14018977 gagta 14018973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 588
Target Start/End: Original strand, 20570175 - 20570268
Alignment:
Q  495 gattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||| ||||||||||||||||| |||| ||||||| |||| ||  | ||| |||||||| |||||||| ||||  | |||||||||||||    
T  20570175 gattagctttgagcaagtgcagatccgatcattgacttttgcgtcgttaacgttacagatccggagacatgaatattccgaagacttgaatata 20570268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 29542958 - 29543094
Alignment:
Q  459 cgtcttagtgcagtgttt-attagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgca 551  Q
    ||||||||||| |||||| ||| ||||||| |||||  ||||||| |||||||||||| |||| |||||||||      ||||||||  || | ||||||    
T  29542958 cgtcttagtgcggtgttttatttgattcaggttgaaaaattagctttgagcaagtgcaaatccgatcaatgacaatgattttggcgtcatcaacgttgca 29543057  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||||||| |||||  |||||| ||||||||    
T  29543058 gatccggagacatgggtatttcggagacatgaatata 29543094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 34416719 - 34416583
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||||||| ||  ||| ||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||| ||| ||| |  |||||    
T  34416719 tcgtcttaatgttgtgcttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttgacgtcgtcaacattgca 34416620  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||||||||  |||||| | ||||||    
T  34416619 gatccggagacatgagtattccggagacataaatata 34416583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 34480179 - 34480260
Alignment:
Q  508 caagtgcagatccaatc-aatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||||||| || ||||||||||||||  |||| |||||||||||| |||||||||||||  || ||||||||||||    
T  34480179 caagtggagatccagtcgaatgactttggcgtcatccacgttgcagatccggagacatgagtattccggcgacttgaatata 34480260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 3390640 - 3390687
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  3390640 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 3390687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 5930640 - 5930695
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||| ||||| ||| |||| |||||||||||| |||||||    
T  5930640 agtgcagatccaatcaatgattttggtgttatccacgttgcagatccggagacatg 5930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 9689940 - 9689869
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||| ||||| ||||||||| ||||||| ||||| ||||| || |||||||||||| |||| |||||||||    
T  9689940 cgtctcagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcatatccgatcaatgac 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 25516709 - 25516756
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  25516709 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 25516756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 36508146 - 36508193
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  36508146 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 36508193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 38822289 - 38822336
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||    
T  38822289 agtgcagatccaatcaatgactttgacgtcatccatgttgcagatccg 38822336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 41177075 - 41177130
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| ||||||||| |||| |||||    
T  41177075 agtgcagatccaatcaatgactttggcgtcatccacgttgcagattcgaaaacatg 41177130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 19580899 - 19580821
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||| ||||||||||||||| |||||| | |||||||||||| |||||||  ||||  |||||||| ||||||    
T  19580899 agtgcatatcaaatcaatgactttggagttgtcaacgttgcagatccggagacatggatattccggagacttaaatata 19580821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 26491518 - 26491596
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||||||||||| || ||| | |||||||||||| ||||||| | |||  |||||||| ||||||    
T  26491518 agtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggcattccggagacttaaatata 26491596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 42105662 - 42105585
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||||||||||| |||||| | ||||||||| ||||||||||  ||||  |||||||| ||||||    
T  42105662 agtgcagatcaaatcaatgactttggagttgtcaacgttgcagat-cgaagacatggttattccggagacttaaatata 42105585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 460 - 566
Target Start/End: Complemental strand, 7072902 - 7072790
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaa------tgactttggcgttgtccatgttgcaga 553  Q
    |||||||||| ||||||||| ||||||| | |||  ||||| | |||| ||||||| ||||||||||      |||||||||||| ||| | ||||||||    
T  7072902 gtcttagtgcggtgtttatttgattcaggtcgaaatattagttttgaggaagtgcaaatccaatcaatgacaatgactttggcgtcgtcaacgttgcaga 7072803  T
Q  554 tccgaagacatga 566  Q
    |||| ||||||||    
T  7072802 tccggagacatga 7072790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 11581086 - 11580973
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||| ||||||| || |||||| ||||||| ||||| |||||| | | | |||||||| || |||||||||| ||| | || ||| | ||||||||||||    
T  11581086 tcgtattagtgcggtatttatttgattcaggttgaaagattaggtttcatcaagtgcaaattcaatcaatgatttttgtgtcgtcaacgttgcagatccg 11580987  T
Q  558 aagacatgagtatt 571  Q
     | |||||||||||    
T  11580986 gaaacatgagtatt 11580973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 588
Target Start/End: Complemental strand, 17116319 - 17116227
Alignment:
Q  495 gattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| || |||| ||||| | || |||| ||||| |||||||||||| || || ||||||||| ||||| |||||| ||||||||||||||||    
T  17116319 gattaactttgagaaagtgaaaattcaataaatgattttggcgttgtcaatattacagatccga-gacataagtattttggagacttgaatata 17116227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 571
Target Start/End: Complemental strand, 29812512 - 29812451
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||||||||||||||| |||||  | ||| | |||||||||||||||||||| |||||    
T  29812512 agtgcagatccaatcaatgattttggaatcgtcaacgttgcagatccgaagacatgggtatt 29812451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 459 - 528
Target Start/End: Original strand, 32015419 - 32015488
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg 528  Q
    ||||||||| |  |||||||| ||||||| ||||| |||||| | ||||||||||||||||| |||||||    
T  32015419 cgtcttagtacgatgtttatttgattcaggttgaaagattagttttgagcaagtgcagatccgatcaatg 32015488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 38535260 - 38535203
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcag 516  Q
    |||| |||||| ||||||||| ||||||| ||||| |||||||| |||||||||||||    
T  38535260 cgtcctagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcag 38535203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 587
Target Start/End: Original strand, 5171974 - 5172089
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    |||||||||  |||||| |||||| ||||||| ||| ||| ||||||| || |||||||||||| ||| ||| | ||| |||||||| |  |||||  ||    
T  5171974 gtgtttattttattcaggttgaag-attagctttgatcaaatgcagattcattcaatgactttgacgtcgtcaacgttccagatccggatgcatgaaaat 5172072  T
Q  571 tatggagacttgaatat 587  Q
    |||||| ||||||||||    
T  5172073 tatggacacttgaatat 5172089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 580
Target Start/End: Complemental strand, 11937813 - 11937687
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatca------atgactttggcgttgtccatgttgcag 552  Q
    |||||||||||  |||||||| |||| || ||||| ||||||   ||||||||||||||||| ||||      ||||| || |||| ||| | ||||||     
T  11937813 cgtcttagtgcgttgtttatttgatt-aggttgaaagattagtattgagcaagtgcagatccgatcagtgacaatgaccttagcgtcgtcaacgttgcat 11937715  T
Q  553 atccgaagacatgagtattatggagact 580  Q
    ||||||||||||||||||| ||||||||    
T  11937714 atccgaagacatgagtattctggagact 11937687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 588
Target Start/End: Complemental strand, 17268065 - 17267946
Alignment:
Q  475 ttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcagatccgaagacatgagt 568  Q
    ||||| ||||||| || ||  ||||||| ||||||||||||||||| |||||||||      |||| ||| ||| | |||||||||||| ||| ||||||    
T  17268065 ttatttgattcaggttaaaaaattagctttgagcaagtgcagatccgatcaatgacaatgactttgacgtcgtcaacgttgcagatccgtagaaatgagt 17267966  T
Q  569 attatggagacttgaatata 588  Q
    |||  | |||||||||||||    
T  17267965 attccgaagacttgaatata 17267946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 498
Target Start/End: Original strand, 18717362 - 18717402
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggatt 498  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  18717362 tcgtcttaatgcagtgtttattagattcagattgaaagatt 18717402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 33012214 - 33012349
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||||||  |||||| ||||| |||||||| ||| |||||||| |||| ||      |||||| |||||||| ||| | ||||||     
T  33012214 cgtcttagtgcggtgtttatttaattcaggttgaaagattagctttgatcaagtgcaaatccgatcaacgacaatgattttggcgtcgtcaacgttgcat 33012313  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||| |||||||||  |||||| | ||||||    
T  33012314 atccggagatatgagtattccggagacataaatata 33012349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 37883872 - 37883948
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||| ||||||||||||||| || ||| | ||||||||| || ||||||||||||| | || |||| ||||||    
T  37883872 tgcagatcaaatcaatgactttggagtcgtcaacgttgcagatacggagacatgagtattctagatacttaaatata 37883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 40039263 - 40039151
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||||| |||||||||  |||||| |||||  |||||   ||| ||||||||||| |||||||||||||| || |  || | ||||||||||||     
T  40039263 cgtcttagtgcggtgtttattttattcaggttgaaaaattagtattgatcaagtgcagattcaatcaatgacttttgcatcatcaacgttgcagatccgg 40039164  T
Q  559 agacatgagtatt 571  Q
    | |||||| ||||    
T  40039163 aaacatgactatt 40039151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 571
Target Start/End: Original strand, 17792641 - 17792751
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaa 559  Q
    |||||| | ||||||||||| ||||||  ||||| |||||| | ||| ||| ||||||| |||||||||||||| ||   || ||  |||||||||||||    
T  17792641 gtcttaatacagtgtttatttgattcatgttgaaagattagttttgatcaaatgcagattcaatcaatgacttttgcaccgt-caaattgcagatccgaa 17792739  T
Q  560 gacatgagtatt 571  Q
     |||||||||||    
T  17792740 aacatgagtatt 17792751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 27024036 - 27023989
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  27024036 agtgcagatccaatcaatgactttggagtcatccacgttgcagatccg 27023989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 43567090 - 43567137
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  43567090 agtgcagatccaatcaatgactttggtgtcatccacgttgcagatccg 43567137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 44167608 - 44167561
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||||||||||| |||  |||| ||||||||||||    
T  44167608 agtgcagatccaatcaatgactttgacgtcatccacgttgcagatccg 44167561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 556
Target Start/End: Original strand, 3465146 - 3465192
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatcc 556  Q
    |||||||||||||||||||| ||||||||  |||| |||||||||||    
T  3465146 agtgcagatccaatcaatgattttggcgtcatccacgttgcagatcc 3465192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 31125276 - 31125198
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||||||||||||||||||||||  || ||||||||||| || || ||||| ||||  ||||| || ||||||    
T  31125276 agtgtagatccaatcaatgactttggcgtcatcaatgttgcagattcggaggcatgactattccggagattttaatata 31125198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 31262850 - 31262772
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| || ||||||| ||||||||||| ||  |  ||||| ||  ||||||||||||||| ||||||||||||||||    
T  31262850 agtgcaaattcaatcaacgactttggcgtcgtgaactttgcatatatgaagacatgagtattctggagacttgaatata 31262772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 35353857 - 35353935
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||| |||||||||||||||  || | |||||||||||| || ||||| ||||  ||||| || ||||||    
T  35353857 agtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatgactatttcggagattttaatata 35353935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 588
Target Start/End: Complemental strand, 15673860 - 15673787
Alignment:
Q  515 agatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||||||||| || ||| |||||||||||| | |||||||  ||||  |||||||| ||||||    
T  15673860 agatcaaatcaatgactttggagtcgtcaatgttgcagatctggagacatggatattccggagacttaaatata 15673787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 588
Target Start/End: Complemental strand, 16720744 - 16720667
Alignment:
Q  511 gtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||| || |||||| |  |||| |||||||||||  | |||||| |||| ||||||||| ||||||    
T  16720744 gtgcagatccaatcaacgattttggcttcatccacgttgcagatccagatacatgattattctggagacttaaatata 16720667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 27191234 - 27191189
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatc 555  Q
    |||| ||||||||||||||||||||||||  |||| ||||||||||    
T  27191234 agtgtagatccaatcaatgactttggcgtcatccacgttgcagatc 27191189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 27841048 - 27841003
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatc 555  Q
    |||| ||||||||||||||||||||||||  |||| ||||||||||    
T  27841048 agtgtagatccaatcaatgactttggcgtcatccacgttgcagatc 27841003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 531
Target Start/End: Original strand, 6510648 - 6510720
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgact 531  Q
    |||||||||||| |||||||| ||||||  |||||  ||||||| |||  ||||||| || ||||||||||||    
T  6510648 cgtcttagtgcaatgtttatttgattcaagttgaaaaattagctttgaataagtgcatattcaatcaatgact 6510720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 524 - 588
Target Start/End: Original strand, 11942605 - 11942669
Alignment:
Q  524 caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||| | |||||||||| | |||||||||||||   ||||| ||||||||    
T  11942605 caatgactttggcgtcgtcaacgttgcagatctggagacatgagtattccagagacatgaatata 11942669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 13268791 - 13268867
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||| |||||||||| |||||||||||  || | |||| |||||||  ||||||||||||   ||||||||||||||    
T  13268791 tgcatatccaatcaacgactttggcgtcttcaacgttgaagatccggggacatgagtattccagagacttgaatata 13268867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 521 - 565
Target Start/End: Complemental strand, 18141367 - 18141323
Alignment:
Q  521 aatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||    
T  18141367 aatcaatgactttggcgtcctccacgttgcagatccggagacatg 18141323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 524 - 588
Target Start/End: Original strand, 25068087 - 25068151
Alignment:
Q  524 caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||| | |||||||||||| ||||| ||| |||  | |||||||||||||    
T  25068087 caatgactttggcgtcgtcaacgttgcagatccggagacaagaggattccgaagacttgaatata 25068151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 13576157 - 13576028
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||||||||| |  || ||||||||||||||     
T  13576157 cgtcttagtgcggtgtttattagattcagattgaaagattaactttgagcaagtgcagatccgatcaacgactttggcatcttcaatgttgcagatccgg 13576058  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||   ||||||||||||||    
T  13576057 agaaatgagtattcctgagacttgaatata 13576028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 10334341 - 10334454
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||| ||||||||| |||||||||||||  ||||||| ||||||| ||||||||| ||||||||||||||| | ||| | ||||||||||||    
T  10334341 tcgtcttagtgcggtgtttatttgattcagattgaaatattagctttgagcaaatgcagatccgatcaatgactttggcatcgtcaacgttgcagatccg 10334440  T
Q  558 aagacatgagtatt 571  Q
     |||||||||||||    
T  10334441 gagacatgagtatt 10334454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 32778918 - 32778791
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||| ||| ||||||||| ||||||| ||||| ||||| || ||||||||||||||||| |||||||||||| |||| ||| |  ||||||||| | ||    
T  32778918 tcttaatgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagatccgatcaatgacttttgcgtcgtcaactttgcagatctggag 32778819  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    ||||||||||| ||||||||||||||||    
T  32778818 acatgagtattctggagacttgaatata 32778791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 7579818 - 7579683
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||||||| | | | |||||||    
T  7579818 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgattaatgacaatgactttggcgtcgccaacgttgcag 7579719  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||  |||||||||||||  |||||||||||||||    
T  7579718 atccagagacatgagtattccggagacttgaatata 7579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 3204749 - 3204613
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||||||||||||||||||||| ||||||  ||||| ||||| || |||||||||||| |||| ||      ||||||||||||||| ||| | ||||||    
T  3204749 tcgtcttagtgcagtgtttatttgattcaagttgaaagattaactttgagcaagtgcatatccgataaatcacaatgactttggcgtggtcaacgttgca 3204650  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||  | |||| ||||||||    
T  3204649 gatccgaagacatgagtattccgaagacatgaatata 3204613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 14600662 - 14600526
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||| ||| ||| | ||||||    
T  14600662 tcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttgacgtcgtcaacgttgca 14600563  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||  |||||| ||||||  |||||||||||||||    
T  14600562 gatccagagacataagtattccggagacttgaatata 14600526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 2025187 - 2025052
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||      | |||| | ||| | |||||||    
T  2025187 cgtcttagtgcggtgtttatttgattcagattgaaagattagctttgagcaagtgcagatccgatcaatgacaatgattctggcatcgtcaacgttgcag 2025088  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||| ||||  |||||||| ||||||    
T  2025087 atccggagacatgattattccggagacttaaatata 2025052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 19720174 - 19720310
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat------gactttggcgttgtccatgttgca 551  Q
    |||||||| ||| ||  ||||| ||||||| ||||| |||||||| ||||||||||||| ||| ||||||      ||||||| ||| ||| | ||||||    
T  19720174 tcgtcttaatgcggtaattatttgattcaggttgaaagattagctttgagcaagtgcaggtccgatcaataacaatgactttgacgtcgtcaacgttgca 19720273  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||  |||||||||||||||    
T  19720274 gatccgaagacatgagtattccggagacttgaatata 19720310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 6220046 - 6219930
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    ||||||||  |||||| ||||| ||||||   ||||||||||||||| |||||||||| ||||||||  || | |||||||||||||| |||||||||||    
T  6220046 tgtttatttcattcaggttgaaagattagtcttgagcaagtgcagattcaatcaatgattttggcgtcttcaacgttgcagatccgaaaacatgagtatt 6219947  T
Q  572 atggagacttgaatata 588  Q
     || | |||||||||||    
T  6219946 ttgtatacttgaatata 6219930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 589
Target Start/End: Complemental strand, 5917646 - 5917567
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatatat 589  Q
    ||||||||||||||||||||||||||||| |||    ||||||| ||||||||||| ||||| |||||||||||||||||    
T  5917646 agtgcagatccaatcaatgactttggcgtcgtcagcattgcagacccgaagacatgggtattttggagacttgaatatat 5917567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 10338785 - 10338667
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||  |||||  ||||||| ||||||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  10338785 cgtcttagtgcggtgtttatttgattcaagttgaaaaattagctttgagcaagtgcagatccgatcaataacaatgactttggcgtcgtcaacgttgcag 10338686  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| |||||||||||||    
T  10338685 atccggagacatgagtatt 10338667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 460 - 588
Target Start/End: Complemental strand, 31407710 - 31407576
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcaga 553  Q
    |||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||||| | ||| |  |||||||    
T  31407710 gtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcttcgtcaacattgcaga 31407611  T
Q  554 tccgaagacatgagtattatggagacttgaatata 588  Q
    |||| || ||||||||||  |||||| ||||||||    
T  31407610 tccggagtcatgagtattccggagacatgaatata 31407576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 10148113 - 10148246
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||| | ||||||||| ||||||| |||||  ||||||| ||||||||||||||||| ||      |||||||||| |||| ||| | |||||||||    
T  10148113 tcttagtacggtgtttatttgattcaggttgaaaaattagctttgagcaagtgcagatccgatcaatgacaatgactttagcgtcgtcaacgttgcagat 10148212  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||||||  |||||||| ||||||    
T  10148213 ccggagacatgagtatttcggagacttaaatata 10148246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 465 - 588
Target Start/End: Original strand, 11162055 - 11162184
Alignment:
Q  465 agtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||| ||||||||| ||||||| ||||| |||||||| |||||||||||| |||    ||||  ||||||||||||||| ||| | ||||||||||||     
T  11162055 agtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcatatctgatcaatgacaatgactttggcgtcgtcaacgttgcagatccgg 11162154  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    | | |||||||||  |||||||||||||||    
T  11162155 aaatatgagtattccggagacttgaatata 11162184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 37128450 - 37128316
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||| | ||||||||||||||||| ||      ||||||||||||||| || ||  ||||||    
T  37128450 cgtcttagtgcggtgtttatttgattcaggttgaaagattagttttgagcaagtgcagatccgatcaataacaatgactttggcgtcgt-caacttgcag 37128352  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||   ||||| ||||||||    
T  37128351 atccggagacatgagtatttcagagacatgaatata 37128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 39067652 - 39067518
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||||||||||  ||||| |||||||| ||||||||||||||||| ||      ||||||||||||||| | | | |||||||    
T  39067652 cgtcttagtgcggtgtttattagattcatgttgaaagattagctttgagcaagtgcagatccgatcgatgacaatgactttggcgtcgccaacgttgcag 39067553  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||  |||||||| ||||  |||||| ||||||||    
T  39067552 atccagagacatga-tattccggagacatgaatata 39067518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 588
Target Start/End: Original strand, 41361902 - 41362033
Alignment:
Q  463 ttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaa------tcaatgactttggcgttgtccatgttgcagatcc 556  Q
    ||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |      ||||||||||||| || ||| | || ||||||||    
T  41361902 ttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgtcaatgactttggtgtcgtcaacgtcgcagatcc 41362001  T
Q  557 gaagacatgagtattatggagacttgaatata 588  Q
      ||||||||| ||| |||||| |||||||||    
T  41362002 agagacatgaggattctggagagttgaatata 41362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 4757331 - 4757402
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  4757331 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 4757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 30026845 - 30026710
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||  ||||| |||||||| ||||||||||||| ||    ||||  ||||||||||||| |  || | |||||||    
T  30026845 cgtcttagtgcggtgtttatttgattcatgttgaaagattagctttgagcaagtgcaggtctgatcaatgacaatgactttggcatcttcaacgttgcag 30026746  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||| ||||  |||||||||||||||    
T  30026745 atccggagacatgaatattccggagacttgaatata 30026710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 43937140 - 43937069
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || ||||||||||||||||| |||||||||    
T  43937140 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagatccgatcaatgac 43937069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 511 - 588
Target Start/End: Original strand, 16809081 - 16809158
Alignment:
Q  511 gtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||  ||||||||||||||| ||||||||| |||||||||||  | |||||||||||  |||||||||||||||    
T  16809081 gtgcagactcaatcaatgactttgacgttgtccacgttgcagatccagaaacatgagtattccggagacttgaatata 16809158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 31147723 - 31147646
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcag-atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| ||||  |||||||||||||  |||||||||||||||    
T  31147723 tgcagatccaatcaatgactttgacgtcgtccacgttgcagaatccagagacatgagtatttcggagacttgaatata 31147646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 38546103 - 38545982
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac-----tttggcgttgtccatgttgcagatccgaagacatga 566  Q
    |||||||| ||||||||||||| ||||| || ||| ||| |||| |||| |||||||||     |||||||| ||| | |||||||||||| |||||| |    
T  38546103 tgtttatttgattcagattgaaagattaactttgaccaaatgcatatccgatcaatgacatagatttggcgtcgtcaacgttgcagatccggagacataa 38546004  T
Q  567 gtattatggagacttgaatata 588  Q
    |||||  |||||||||||||||    
T  38546003 gtattccggagacttgaatata 38545982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 527
Target Start/End: Complemental strand, 2234433 - 2234365
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat 527  Q
    ||||||||||| ||||||||| ||||||| |||||  ||||||| ||||||||||||||||| ||||||    
T  2234433 cgtcttagtgcggtgtttatttgattcaggttgaaatattagctttgagcaagtgcagatccgatcaat 2234365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 10633144 - 10633032
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||||| |||||||||  |||||| ||||| |||||||| ||| |||||| |||| |||||||||| ||| |||| ||| | ||||||||  |||    
T  10633144 cgtcttagtgcggtgtttattttattcaggttgaaagattagctttgatcaagtgtagattcaatcaatgatttttgcgtcgtcaacgttgcagactcga 10633045  T
Q  559 agacatgagtatt 571  Q
    | |||| ||||||    
T  10633044 aaacatcagtatt 10633032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 9501752 - 9501823
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||| |||| ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| |||||||||    
T  9501752 cgtctttgtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgac 9501823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 12329793 - 12329911
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||| ||| ||||||||| |||| || |||||  ||||||| ||||||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  12329793 cgtcttaatgcggtgtttatttgatttaggttgaaaaattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 12329892  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| ||||||| |||||    
T  12329893 atccggagacatgggtatt 12329911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 37612819 - 37612890
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||  ||||| |||||||| ||||||| ||||||||| |||||||||    
T  37612819 cgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaattgcagatccgatcaatgac 37612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 564
Target Start/End: Complemental strand, 14115725 - 14115671
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    |||||||||||||||||||||||||||||  |||| |||||||||| ||||||||    
T  14115725 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatctgaagacat 14115671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 15665756 - 15665834
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||| ||  ||   |||||||||||| ||||||| |||||  |||||||||||||||    
T  15665756 agtgcagatccaatcaatgactttggtgtcatcagcgttgcagatccggagacatgggtatttcggagacttgaatata 15665834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 460 - 530
Target Start/End: Original strand, 31202625 - 31202695
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||||||||||| ||||||| ||||| ||||| || ||| ||||||||||||  |||||||||    
T  31202625 gtcttagtgcagtgtttatttgattcaggttgaaagattaactttgatcaagtgcagatctgatcaatgac 31202695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 564
Target Start/End: Original strand, 41996760 - 41996814
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  41996760 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacat 41996814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 588
Target Start/End: Complemental strand, 23971115 - 23971011
Alignment:
Q  490 tgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttga 583  Q
    |||| |||||||| ||||||||||||||||| |||||||||      |||| ||| ||| | |||||| |||| ||||||||||||||  ||||||||||    
T  23971115 tgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttgacgtcgtcaacgttgcaaatccaaagacatgagtattccggagacttga 23971016  T
Q  584 atata 588  Q
    |||||    
T  23971015 atata 23971011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 508 - 557
Target Start/End: Complemental strand, 37129574 - 37129525
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  37129574 caagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 37129525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 535
Target Start/End: Original strand, 2968698 - 2968774
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttgg 535  Q
    ||||||||||| || |||||| ||||||| ||||| |||  ||| |||||||||||| |||| ||||||||||||||    
T  2968698 cgtcttagtgcggtatttatttgattcaggttgaaagatccgctttgagcaagtgcaaatccgatcaatgactttgg 2968774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 3925589 - 3925509
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| ||||||||||||||| || ||| | |||||||||  | |||||||||||||  |||||||| ||||||    
T  3925589 caagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatttggagacatgagtattccggagacttaaatata 3925509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 7269362 - 7269285
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||| || || ||||||||| ||| |||||||||||||||||| ||||||| |||||  ||| |||||||||||    
T  7269362 agtgcagattcattctatgactttg-cgtcgtccatgttgcagatccggagacatgggtattccggatacttgaatata 7269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 10042989 - 10043067
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||| ||||||| || ||| | |||||||||||| ||||||| |||||  |||||||| ||||||    
T  10042989 agtgcagatcaaatcaataactttggagtcgtcaacgttgcagatccggagacatgtgtattccggagacttaaatata 10043067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 13977625 - 13977703
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| || ||||||| ||||||| | | ||| | |||||||||||| ||| ||||||||| ||||||||||||||||    
T  13977625 agtgcaaattcaatcaacgactttgacatcgtcaacgttgcagatccggagatatgagtattctggagacttgaatata 13977703  T

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Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 571
Target Start/End: Original strand, 3681129 - 3681190
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    ||||||||| ||||||||||||||| ||| || || |||| ||||||||||||||| |||||    
T  3681129 agtgcagattcaatcaatgactttgacgtcgttcacgttgaagatccgaagacatgtgtatt 3681190  T

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Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 524 - 589
Target Start/End: Original strand, 5526039 - 5526104
Alignment:
Q  524 caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatatat 589  Q
    ||||||||||||| |  || | |||||||||||| ||||||||| ||| |||||||||||||||||    
T  5526039 caatgactttggcatcatcaacgttgcagatccggagacatgagaattctggagacttgaatatat 5526104  T

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Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 562
Target Start/End: Complemental strand, 283885 - 283833
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagac 562  Q
    |||||||||| ||||||||||||| |||| ||||| |||||||||||| ||||    
T  283885 agtgcagatcaaatcaatgactttagcgtcgtccacgttgcagatccggagac 283833  T

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Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 631992 - 632044
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagac 562  Q
    |||||||||| ||||||||||||| |||| ||||| |||||||||||| ||||    
T  631992 agtgcagatcaaatcaatgactttagcgtcgtccacgttgcagatccggagac 632044  T

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Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 817804 - 817856
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagac 562  Q
    |||||||||| ||||||||||||| |||| ||||| |||||||||||| ||||    
T  817804 agtgcagatcaaatcaatgactttagcgtcgtccacgttgcagatccggagac 817856  T

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Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 12244111 - 12244035
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||  || ||| ||||||||| |||| ||| ||| |||||   ||||||||||||||    
T  12244111 tgcagatccaatcaatgactttgatgtcgtcaatgttgcagttccggagatatgggtattccagagacttgaatata 12244035  T

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Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 566
Target Start/End: Complemental strand, 13570701 - 13570589
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcaga 553  Q
    |||||||||  ||||||||| ||||||  ||||| |||||||| ||||||||||||||||    ||||  ||||||||||||| | ||| | ||||||||    
T  13570701 gtcttagtgtggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagatctgatcaattacaatgactttggcatcgtcaacgttgcaga 13570602  T
Q  554 tccgaagacatga 566  Q
    |||| ||| ||||    
T  13570601 tccggagatatga 13570589  T

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Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 571
Target Start/End: Original strand, 19489007 - 19489107
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    ||||||||| ||||||| ||||| ||||| || ||| |||||||| || |||||||||||||| ||   ||| | ||||||||| |||| |||| |||||    
T  19489007 gtgtttatttgattcaggttgaaagattaactttgatcaagtgcaaattcaatcaatgacttttgctcagtcaacgttgcagattcgaaaacataagtat 19489106  T
Q  571 t 571  Q
    |    
T  19489107 t 19489107  T

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Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 5457288 - 5457343
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||| |||||| |||  |||| |||||||||||| |||||||    
T  5457288 agtgcagatccaatcaataactttgccgtcatccacgttgcagatccggagacatg 5457343  T

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Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 8054704 - 8054650
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  ||||  ||||||||||| |||||||    
T  8054704 agtgcagatccaatcaatgactttggcgtcatcca-cttgcagatccggagacatg 8054650  T

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Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 16996786 - 16996731
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| |||||| ||| ||| |||||    
T  16996786 agtgcagatccaatcaatgactttggcgtcatccacgttgcaaatctgaaaacatg 16996731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 22787658 - 22787791
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcaga--tccaat--caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||| || ||||||    ||||   |||||||||||||| ||| |  ||||||||    
T  22787658 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagtaaatgcagacgatcaatgagaatgactttggcgtcgtcaacattgcagat 22787757  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| ||||||| |||||  |||||| | ||||||    
T  22787758 ccggagacatgggtattccggagacataaatata 22787791  T

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Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 44295533 - 44295580
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||||||||||| |||  |||| ||||||||||||    
T  44295533 agtgcagatccaatcaatgactttgacgtcatccacgttgcagatccg 44295580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 558
Target Start/End: Original strand, 9992886 - 9992932
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||    
T  9992886 tgcagatccaatcaacgactttggcgtcatccacgttgcagatccga 9992932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 564
Target Start/End: Complemental strand, 18197043 - 18196989
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    ||||||||||||| ||||||||||| ||| ||| | |||||||||||| ||||||    
T  18197043 agtgcagatccaaccaatgactttgacgtcgtcaacgttgcagatccggagacat 18196989  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 5328169 - 5328213
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||   ||||| ||||||||||||    
T  5328169 agtgcagatccaatcaatgactttggc---gtccacgttgcagatccg 5328213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 557
Target Start/End: Original strand, 32062009 - 32062058
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||| |||||||||||||||  || | ||||||||||||    
T  32062009 caagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccg 32062058  T

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Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 588
Target Start/End: Complemental strand, 32256617 - 32256540
Alignment:
Q  511 gtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||| ||||||||||||||| ||  || | |||||||||||| ||||| | |||||  |||||||| ||||||    
T  32256617 gtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccggagacttaaatata 32256540  T

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Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 588
Target Start/End: Original strand, 33526600 - 33526681
Alignment:
Q  507 gcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| | ||||| |||||| | || ||  | |||| |||||| | |||||||||||| ||||||||||||||||    
T  33526600 gcaagtgcagattcgatcaacgactttagtgtcgttaacgttgtagatccaatgacatgagtattctggagacttgaatata 33526681  T

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Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 21954774 - 21954644
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||  ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| ||||||||||||||||| ||| | ||||||||||||    
T  21954774 tcgtcttagtgtcgtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgactttggcgtcgtcaacgttgcagatccg 21954675  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     || ||||||||||  ||| |||||||||||    
T  21954674 gagtcatgagtattccggacacttgaatata 21954644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 45482230 - 45482365
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||||| |||| | |||||||    
T  45482230 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgctgtcaacgttgcag 45482329  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||||||||||||    
T  45482330 atccggagacatgagtattccggagacttgaatata 45482365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 45457512 - 45457376
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||||||||| | ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||| || ||| | ||||||    
T  45457512 tcgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggagtcgtcaacgttgca 45457413  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||||||||||||| ||||||| ||||||||    
T  45457412 gatccggagacatgagtattctggagacatgaatata 45457376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 9719928 - 9719810
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||      |||||||| ||| | |||||||    
T  9719928 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgattttggcgtagtcaacgttgcag 9719829  T
Q  553 atccgaagacatgagtatt 571  Q
    ||| |||||||||||||||    
T  9719828 atcagaagacatgagtatt 9719810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 36579296 - 36579161
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||| ||||||| || |||||    ||||  ||||||||||||||| ||| |||||||||    
T  36579296 cgtcttagtgcggtgtttatttgattcagattgaaagattagctttgagcaattgtagatctgatcaatgacaatgactttggcgtcgtcaatgttgcag 36579197  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||| ||||||  |||||| ||||||||    
T  36579196 atccggagacattagtattccggagacatgaatata 36579161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 2622760 - 2622893
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg------actttggcgttgtccatgttgcagat 554  Q
    |||| |||| ||||||||| |||||| |||||| ||||| || |||||||||||||||||||||||||      |||||||||| ||| |  ||||||||    
T  2622760 tctttgtgcggtgtttatttgattcaaattgaaagattaactttgagcaagtgcagatccaatcaatgacaataactttggcgtcgtcaacattgcagat 2622859  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||  |||||| ||||||||    
T  2622860 ccgaagacatgagtattccggagacatgaatata 2622893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 463 - 589
Target Start/End: Complemental strand, 4621318 - 4621192
Alignment:
Q  463 ttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagac 562  Q
    ||||||| ||||||||| ||||||| ||||| |||||| | ||| ||||||||||||| |||||||||||||| ||  || |  ||||||||||| ||||    
T  4621318 ttagtgcggtgtttatttgattcaggttgaaagattagttttgaacaagtgcagatccgatcaatgactttggtgtcatcaacattgcagatccggagac 4621219  T
Q  563 atgagtattatggagacttgaatatat 589  Q
    |||||||||  |||||||| |||||||    
T  4621218 atgagtatttcggagacttaaatatat 4621192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 471 - 588
Target Start/End: Complemental strand, 14657794 - 14657677
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    ||||||||| ||||||||||||| ||||| || ||||||| |||| || | |||||||||||||||||  || |||||||||||||| ||||||||||||    
T  14657794 gtgtttatttgattcagattgaaagattaactttgagcaaatgcatattcgatcaatgactttggcgtcatcaatgttgcagatccggagacatgagtat 14657695  T
Q  571 tatggagacttgaatata 588  Q
    | |||  ||| |||||||    
T  14657694 tctggtaactcgaatata 14657677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 24320178 - 24320043
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||| || ||| |  ||||||    
T  24320178 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatctatgacaatgactttggtgtcgtcaacattgcag 24320079  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||| || |||||||||||| |||| |||||||||||    
T  24320078 atctgatgacatgagtattctggaaacttgaatata 24320043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 460 - 588
Target Start/End: Original strand, 39707452 - 39707579
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaa 559  Q
    ||||||||||||||||||||  |||||  |||||| |||| || ||||||||||||||||||||||||||||||| | |  |  | |||||| ||||| |    
T  39707452 gtcttagtgcagtgtttattt-attcaagttgaagtattaactttgagcaagtgcagatccaatcaatgactttgacatcattaacgttgcatatccgga 39707550  T
Q  560 gacatgagtattatggagacttgaatata 588  Q
    ||||||||||||  |||||||||||||||    
T  39707551 gacatgagtattccggagacttgaatata 39707579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 1281092 - 1280957
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || ||||||||||||||||    ||||  ||||||||||||||| ||| | |||||||    
T  1281092 cgtcttagtgcggtgtttatttgattcaggttgaaagattacctttgagcaagtgcagatccgaacaatgacaatgactttggcgtcgtcaacgttgcag 1280993  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||| ||||||||| |||||||  |||||||    
T  1280992 atccggagatatgagtattctggagacacgaatata 1280957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 21990828 - 21990946
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||| ||||| ||      ||||||||||||||| ||| | |||||||    
T  21990828 cgtcttagtgcggtgtttatttgattcagcttgaaagattagctttgagcaagtgctgatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 21990927  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| |||||||||||||    
T  21990928 atccggagacatgagtatt 21990946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 9785485 - 9785618
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||| || ||| | |||||||||    
T  9785485 tcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggagtcgtcaacgttgcagat 9785584  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| | ||||||||||| | ||||| ||||||||    
T  9785585 ccggaaacatgagtattctagagacatgaatata 9785618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 28664896 - 28664778
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||    ||||  ||||||||||||||| ||| | |||||||    
T  28664896 cgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatctgatcaatgacaatgactttggcgtcgtcaacgttgcag 28664797  T
Q  553 atccgaagacatgagtatt 571  Q
    || |  |||||||||||||    
T  28664796 attcagagacatgagtatt 28664778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 29352392 - 29352521
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| || ||||||| |||| | |||||||||||| |||| ||| | ||||||||||||     
T  29352392 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgtgcaagtgtagattcgatcaatgacttttgcgtcgtcaacgttgcagatccgg 29352491  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||    |||||||||||||    
T  29352492 agagatgagtattccaaagacttgaatata 29352521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 11833183 - 11833255
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  11833183 tcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 11833255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 17509159 - 17509024
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||||||  |||||| ||||| |||||| | ||||||||||||||||| ||      ||||||||||||||| ||| | || ||||    
T  17509159 cgtcttagtgcggtgtttatttaattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgtcgcag 17509060  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| ||||||||    
T  17509059 atccggagacatgagtattccggagacatgaatata 17509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 17544055 - 17544190
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||||||  |||||| ||||| |||||| | ||||||||||||||||| ||      ||||||||||||||| ||| | || ||||    
T  17544055 cgtcttagtgcggtgtttatttaattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgtcgcag 17544154  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| ||||||||    
T  17544155 atccggagacatgagtattccggagacatgaatata 17544190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 41288122 - 41288257
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||| | ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||||||| ||| | |||| ||    
T  41288122 cgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgtag 41288221  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| | |||||||||||  |||||||| ||||||    
T  41288222 atccggatacatgagtatttcggagacttaaatata 41288257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 24988435 - 24988317
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||| |||||| ||      |||||||||||| |||||| | |||||||    
T  24988435 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgtagatccgatcaatgacaatgactttggtgttgtcaacgttgcag 24988336  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| | |||||||||||    
T  24988335 atccggatacatgagtatt 24988317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 460 - 588
Target Start/End: Original strand, 26161118 - 26161252
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcaga 553  Q
    |||||||||| | ||| ||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||||||| ||| | ||||||||    
T  26161118 gtcttagtgcggggttcatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcaga 26161217  T
Q  554 tccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||||||||||   |||||| ||||||||    
T  26161218 tccggagacatgagtatcccggagacatgaatata 26161252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 48304349 - 48304212
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat-------caatgactttggcgttgtccatgttgc 550  Q
    |||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||       ||||||||||||||| ||| | |||||    
T  48304349 tcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcgaatgacaatgactttggcgtcgtcaacgttgc 48304250  T
Q  551 agatccgaagacatgagtattatggagacttgaatata 588  Q
    |||| || | |||||||||||  || ||| ||||||||    
T  48304249 agatacggacacatgagtattccggtgacatgaatata 48304212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 3266551 - 3266687
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||||||||| | ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||| || ||| | |||| |    
T  3266551 tcgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggtgtcgtcaacgttgta 3266650  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||||||||||| |  |||||||| ||||||    
T  3266651 gatccggagacatgagtacttcggagacttaaatata 3266687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 38277010 - 38277139
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    |||||||||||| |||||||| ||||||  |||||  ||||||| ||||||||| || |||| ||||||||||||||||| ||| | ||||||||| |      
T  38277010 cgtcttagtgcaatgtttatttgattcatgttgaaatattagctttgagcaagttcaaatccgatcaatgactttggcgtcgtcaacgttgcagatacag 38277109  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    || |||| || ||  |||||||||||||||    
T  38277110 agtcatgggtgttccggagacttgaatata 38277139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 46918626 - 46918694
Alignment:
Q  520 caatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||| | ||||| ||||||||||||||  ||||||||||||| ||||||||||||||||    
T  46918626 caatcaatgactttagtgttgtgcatgttgcagatccagagacatgagtattttggagacttgaatata 46918694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 462 - 585
Target Start/End: Original strand, 9137125 - 9137248
Alignment:
Q  462 cttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaaga 561  Q
    |||||||  ||||||||| |||| || || || |||||||| |||| ||||||| || | |||| |||||||||||| ||| | |||||||||||| |||    
T  9137125 cttagtgtggtgtttatttgattaaggttaaaagattagctttgagaaagtgcatattcgatcattgactttggcgtcgtcaacgttgcagatccggaga 9137224  T
Q  562 catgagtattatggagacttgaat 585  Q
    ||| ||||||  ||||||||||||    
T  9137225 cataagtattccggagacttgaat 9137248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 10094607 - 10094678
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| |||||||||    
T  10094607 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgac 10094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 46025984 - 46025913
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| |||| || ||||| |||||||| ||||||||||||||||| |||||||||    
T  46025984 cgtcttagtgcggtgtttatttgatttaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 46025913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 460 - 554
Target Start/End: Original strand, 6496059 - 6496153
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||||| |||||||| ||||||| ||||| ||||| || ||| ||||||||||||| |||||| |||||| | | ||| |||||||||||    
T  6496059 gtcttagtgcaatgtttatttgattcaggttgaaagattaactttgaacaagtgcagatccgatcaataactttgacatcgtcaatgttgcagat 6496153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 588
Target Start/End: Complemental strand, 39532927 - 39532795
Alignment:
Q  462 cttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatc------aatgactttggcgttgtccatgttgcagatc 555  Q
    |||||||| ||||||||| ||||||  ||||| |||||||| ||||||||||||||||| |||      ||||||||||| || ||| |  |||||||||    
T  39532927 cttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagatccgatcaatgataatgactttggagtcgtcaacattgcagatc 39532828  T
Q  556 cgaagacatgagtattatggagacttgaatata 588  Q
    || | ||||||||||| ||| ||| ||||||||    
T  39532827 cggaaacatgagtattctggggacatgaatata 39532795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 31703374 - 31703486
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||| |||  ||||| | || |||||||||| ||||  || ||| |||||||||||| ||    
T  31703374 cgtcttagtgtagtatttatttgattcagattgaaagattagctttgaataagtgtatatacaatcaatgattttgatgtcgtcaatgttgcagatctga 31703473  T
Q  559 agacatgagtatt 571  Q
    || ||| ||||||    
T  31703474 aggcataagtatt 31703486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 524 - 588
Target Start/End: Original strand, 32643205 - 32643269
Alignment:
Q  524 caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||| |||  |||||||||||||||    
T  32643205 caatgactttggcgtcgtccacgttgcagatccggagacatgaggattccggagacttgaatata 32643269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 37714645 - 37714757
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    |||||||||||| |||||||| ||||||| ||||| |||||  | ||| ||||||||||| |||||||| || ||  ||| ||| | |||||| ||||||    
T  37714645 cgtcttagtgcaatgtttatttgattcaggttgaaagattaattttgatcaagtgcagattcaatcaataacatttacgtcgtcaacgttgcaaatccga 37714744  T
Q  559 agacatgagtatt 571  Q
    | |||||||||||    
T  37714745 aaacatgagtatt 37714757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 45949578 - 45949498
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||||| || ||||| ||||  ||||| || ||||||    
T  45949578 caagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgactattccggagattttaatata 45949498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 21603626 - 21603697
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || |||| |||||||||||| |||||||||    
T  21603626 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagaaagtgcagatccgatcaatgac 21603697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 514 - 588
Target Start/End: Complemental strand, 5024949 - 5024875
Alignment:
Q  514 cagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||||||||||||||| || ||| |||||||||||||| ||||||  ||||| ||||||||| ||||||    
T  5024949 cagatcaaatcaatgactttggagtcgtcaatgttgcagatccggagacataggtattctggagacttaaatata 5024875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 33530372 - 33530294
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||||||||||||| ||||||||  || | |||||||||||  |||||||||||||  |||||||||||||||    
T  33530372 agtgcaaatccaatcaatgaatttggcgtcatcaacgttgcagatcctgagacatgagtatttcggagacttgaatata 33530294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 566
Target Start/End: Original strand, 42644838 - 42644951
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||||||  |||||| |||||  ||||||| ||||||||| ||||||| |||||||||      |||||||| ||| | |||||||    
T  42644838 cgtcttagtgcggtgtttatttaattcaggttgaaatattagctttgagcaagtacagatccgatcaatgacaatgattttggcgtcgtcaacgttgcag 42644937  T
Q  553 atccgaagacatga 566  Q
    ||||| ||||||||    
T  42644938 atccggagacatga 42644951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 23732290 - 23732245
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatc 555  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  23732290 agtgcagatccaatcaatgactttggcgtcgtccacgttgcagatc 23732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 508 - 589
Target Start/End: Complemental strand, 26638595 - 26638514
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatatat 589  Q
    |||||| |||||||||||||||||||| | | ||  |  ||| ||||||||||||||||||||| |||| ||||||||||||    
T  26638595 caagtgtagatccaatcaatgactttgacttcgtgaacattgtagatccgaagacatgagtattttggacacttgaatatat 26638514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 587
Target Start/End: Original strand, 36350385 - 36350461
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    ||||| ||||||||||||| ||||||||| ||| | ||||||||| || |||||| |||||| |||||||||||||||    
T  36350385 agtgcggatccaatcaatggctttggcgtcgtcaacgttgcagattcggagacat-agtattctggagacttgaatat 36350461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 15674566 - 15674431
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaa------tgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  |||||||||  |||||| ||||| |||||||| | |||||||||| || |||||||      |||| ||||||||||| | |||||||    
T  15674566 cgtcttagtgtggtgtttattttattcaggttgaaagattagcttttagcaagtgcaaattcaatcaacgacaatgacgttggcgttgtcaacgttgcag 15674467  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    || |||| |||||||||||   ||||| ||||||||    
T  15674466 attcgaaaacatgagtattccagagacatgaatata 15674431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 17473707 - 17473572
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||| |||| |||||||||  |||||| ||||| |||||| | ||||||||||||||||| ||      ||||||||||||||| ||| | || ||||    
T  17473707 cgtctttgtgcggtgtttatttaattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgtcgcag 17473608  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||  |||||||||||||  ||||||  |||||||    
T  17473607 atccagagacatgagtattccggagacaggaatata 17473572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 17579507 - 17579642
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||| |||| |||||||||  |||||| ||||| |||||| | ||||||||||||||||| ||      ||||||||||||||| ||| | || ||||    
T  17579507 cgtctttgtgcggtgtttatttaattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgtcgcag 17579606  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||  |||||||||||||  ||||||  |||||||    
T  17579607 atccagagacatgagtattccggagacaggaatata 17579642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 22747464 - 22747329
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||||| || ||||||| | |||| || ||||| |||||||||||||||||||||||||  ||      |||||| |||||||| ||| | |||||||    
T  22747464 cgtcttagggcggtgtttaattgattaaggttgaaagattagctctgagcaagtgcagatctgatcattgacaatgaatttggcgtcgtcaacgttgcag 22747365  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||  | ||| |||||||||  |||||||||||||||    
T  22747364 atttgtagaaatgagtattccggagacttgaatata 22747329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 588
Target Start/End: Original strand, 36253108 - 36253231
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    ||||||||| ||||||| |||||  ||||||| ||||||||||||||||| ||      ||||||||||||||| ||| | |||| ||||||| ||||||    
T  36253108 gtgtttatttgattcaggttgaaaaattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgtagatccggagacat 36253207  T
Q  565 gagtattatggagacttgaatata 588  Q
    | | |||  |||||| ||||||||    
T  36253208 gggaatttcggagacatgaatata 36253231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 135042 - 134987
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| |||||||||| | |||||||    
T  135042 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatctggagacatg 134987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 7986109 - 7986164
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    ||||||||||||||||||||||||| |||  |||| |||||||||||||| |||||    
T  7986109 agtgcagatccaatcaatgactttgacgtcatccacgttgcagatccgaatacatg 7986164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 8319532 - 8319587
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||| ||||||||||||||||||||  |||| |||||||||||| |||||||    
T  8319532 agtgcagacccaatcaatgactttggcgtcatccacgttgcagatccggagacatg 8319587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 581
Target Start/End: Complemental strand, 10250380 - 10250309
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagactt 581  Q
    |||||||||| ||||||||||||||| ||  || |||| | ||||||||||||||| ||||| |||||||||    
T  10250380 agtgcagatcaaatcaatgactttggagtcatcaatgtagtagatccgaagacatgtgtattttggagactt 10250309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 10574547 - 10574618
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||| | ||||||||| ||||||  ||||| |||||| | ||||||||||||||||| |||||||||    
T  10574547 cgtcttagttcggtgtttatttgattcatgttgaaagattagttttgagcaagtgcagatccgatcaatgac 10574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 36719507 - 36719372
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  ||| ||||| ||||||| ||||| ||||| || ||||||||| ||||||    ||||  |||||||||||||||  || | ||| |||    
T  36719507 cgtcttagtggggtgcttatttgattcaggttgaaagattaactttgagcaagtacagatctgatcaatgacaatgactttggcgtcatcaacgttccag 36719408  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| ||||||||    
T  36719407 atccggagacatgagtatttcggagacatgaatata 36719372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 40775484 - 40775539
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||  |||||||    
T  40775484 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccagagacatg 40775539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 19895581 - 19895503
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||| |||||||||||||||||||  |||| |||| |||| || |||||||| |||| |||||| || ||||||    
T  19895581 agtgcagattcaatcaatgactttggcgtcatccacgttgtagattcggagacatgattattctggagatttaaatata 19895503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 588
Target Start/End: Complemental strand, 22379602 - 22379528
Alignment:
Q  514 cagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||| |||||||||||| | |  || | ||||||||||||||||||||||||||   ||||||||||||||    
T  22379602 cagatccagtcaatgactttgacatcttcaacgttgcagatccgaagacatgagtattccagagacttgaatata 22379528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 588
Target Start/End: Complemental strand, 44482806 - 44482693
Alignment:
Q  481 gattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatg 574  Q
    ||||||| |||||  ||||||| ||||||||||||||||| ||      |||||||||||| || ||| | |||||||||||| |||||||||||||  |    
T  44482806 gattcaggttgaaatattagctttgagcaagtgcagatccgatcaatgacaatgactttggtgtcgtcaacgttgcagatccggagacatgagtattccg 44482707  T
Q  575 gagacttgaatata 588  Q
    ||||| | ||||||    
T  44482706 gagacattaatata 44482693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 571
Target Start/End: Original strand, 772660 - 772721
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    ||||||||||||||||||||||||||||| ||| |  ||| ||||||  |||||||||||||    
T  772660 agtgcagatccaatcaatgactttggcgtcgtcaacattgaagatccagagacatgagtatt 772721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 528
Target Start/End: Original strand, 5684542 - 5684599
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg 528  Q
    |||||| || ||||||| ||||| |||||||| ||||||||||||||||| |||||||    
T  5684542 gtgtttgtttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatg 5684599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 528
Target Start/End: Original strand, 5709592 - 5709649
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg 528  Q
    |||||| || ||||||| ||||| |||||||| ||||||||||||||||| |||||||    
T  5709592 gtgtttgtttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatg 5709649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 40761753 - 40761889
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||| ||||||| ||||||||| |||| || |||||  ||||||| ||| ||||||||||||| ||      ||||||||||||| | ||| | ||| ||    
T  40761753 tcgtattagtgcggtgtttatttgattaaggttgaaatattagctttgaacaagtgcagatccgatcaatgacaatgactttggcatcgtcaacgttaca 40761852  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||||||||  |||||| | ||||||    
T  40761853 gatccggagacatgagtattccggagacataaatata 40761889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 588
Target Start/End: Original strand, 6667632 - 6667696
Alignment:
Q  524 caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||| | ||||||||||||||||| ||||||||  |||||| | ||||||    
T  6667632 caatgactttggcgtcgtcaacgttgcagatccgaagacctgagtattccggagacataaatata 6667696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 9934031 - 9934115
Alignment:
Q  481 gattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||   ||| |||| ||| | |||||||||| ||||||||||||||| || ||| | |||||||||||| |||||||    
T  9934031 gattcagattgtcagatcagctttgatccagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatg 9934115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 14707802 - 14707877
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| |||||||||  | | |||||||||||||||| ||||||||| ||||| |||| || ||||||||    
T  14707802 tgcagatccaattaatgactttatcatcgtccatgttgcagatctgaagacatg-gtattctggatacatgaatata 14707877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 21552350 - 21552274
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||| |||||||||||||||  || | ||||||||||||||| ||||| ||||  ||||| || ||||||    
T  21552350 tgcagatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatgactatttcggagattttaatata 21552274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 532
Target Start/End: Original strand, 25531620 - 25531692
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaa-tcaatgactt 532  Q
    ||||||||| ||||||||| |||| || ||||| |||||||| |||||||||||| ||| || ||||||||||    
T  25531620 tcttagtgcggtgtttatttgattaaggttgaatgattagctttgagcaagtgcaaatcaaattcaatgactt 25531692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 31724839 - 31724915
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||| |||||||||| ||| |||||||| | |||| ||||||||| ||||||||||| ||| | ||| ||||||    
T  31724839 tgcagattcaatcaatgaattttgcgttgtcaacgttgaagatccgaaaacatgagtattttggtggcttaaatata 31724915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 8611521 - 8611474
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||| ||||||||||  |||| ||||||||||||    
T  8611521 agtgcagatccaatcaataactttggcgtcatccacgttgcagatccg 8611474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 571
Target Start/End: Original strand, 10623977 - 10624076
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||||  ||||| |||||||| ||| ||||| || || |||||||||||||| | || ||| | |||| |||| |||| |||||||||||    
T  10623977 tgtttatttgattcaagttgaaagattagctttgatcaagtacaaattcaatcaatgacttttgtgtcgtcaacgttgtagattcgaaaacatgagtatt 10624076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 21329195 - 21329148
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||| |||||||||||||||| || | ||||||||||||    
T  21329195 agtgcagatccaaccaatgactttggcgttatcaacgttgcagatccg 21329148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 589
Target Start/End: Original strand, 28015574 - 28015653
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatatat 589  Q
    |||||||||| ||||||||||||||| || ||| |  ||||||||||| ||||||  ||||| ||||| ||| |||||||    
T  28015574 agtgcagatcaaatcaatgactttggagtcgtcaacattgcagatccggagacataggtattctggaggcttaaatatat 28015653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 32740918 - 32740989
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||  |||| |||| ||||||| ||||| |||||| | |||||||||||| |||| |||||||||    
T  32740918 cgtcttagtgtggtgtctatttgattcaggttgaaagattagttttgagcaagtgcaaatccgatcaatgac 32740989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 43807047 - 43807000
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||    
T  43807047 agtgcagatccaatcaatgactttggcggcatccacgttgcagatccg 43807000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 551 - 589
Target Start/End: Complemental strand, 26638475 - 26638437
Alignment:
Q  551 agatccgaagacatgagtattatggagacttgaatatat 589  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  26638475 agatccgaagacatgagtattttggacacttgaatatat 26638437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 35363004 - 35362926
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| || |||||||||||||||  || ||| | ||||||||| ||||||||||  ||||  |||||||||||||||    
T  35363004 agtgcaaatacaatcaatgactttgatgtcgtcaacgttgcagattcgaagacatggatatttcggagacttgaatata 35362926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Complemental strand, 37375928 - 37375866
Alignment:
Q  526 atgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||| ||| | |||||||||| | |||||||||||||  |||||| ||||||||    
T  37375928 atgactttggcgtcgtcaacgttgcagatctggagacatgagtattcaggagacatgaatata 37375866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 27050419 - 27050350
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaat 527  Q
    |||||||||||| ||||||||| ||||||  | ||| |||||||| ||||||| ||||||  ||||||||    
T  27050419 tcgtcttagtgcggtgtttatttgattcatgtcgaaagattagctttgagcaaatgcagactcaatcaat 27050350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 557
Target Start/End: Original strand, 40476922 - 40476971
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||||||||||||| |||  |||| |||| |||||||    
T  40476922 caagtgcagatccaatcaatgactttgacgtcatccacgttgtagatccg 40476971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 564
Target Start/End: Original strand, 40657840 - 40657881
Alignment:
Q  523 tcaatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    ||||||||||||||||| |||| |||||||||||| ||||||    
T  40657840 tcaatgactttggcgttatccacgttgcagatccggagacat 40657881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 563
Target Start/End: Original strand, 42490920 - 42490973
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagaca 563  Q
    |||||||||||| ||||||||| ||||||  |||| |||||||||||| |||||    
T  42490920 agtgcagatccagtcaatgactgtggcgtcatccacgttgcagatccggagaca 42490973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 587
Target Start/End: Original strand, 9137574 - 9137701
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    |||||||| ||| |||||||| ||||||| ||||| |||||| | ||||||| |||||||   || | ||| |||||||| ||| | |||||| ||||      
T  9137574 cgtcttagcgcaatgtttatttgattcagtttgaaagattagttttgagcaa-tgcagatatgattattgaatttggcgtcgtcaacgttgcaaatccag 9137672  T
Q  559 agacatgagtattatggagacttgaatat 587  Q
    | |||||||||||  | ||||||||||||    
T  9137673 atacatgagtattccgaagacttgaatat 9137701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 16273597 - 16273677
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| ||||||||||| |||  | ||| | |||||||||||| |||||||  ||||  |||||||| ||||||    
T  16273597 caagtgcagatcaaatcaatgactctggactcgtcaacgttgcagatccggagacatggatattccggagacttaaatata 16273677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 538
Target Start/End: Complemental strand, 26017555 - 26017527
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgt 538  Q
    |||||||||||||||||||||||||||||    
T  26017555 agtgcagatccaatcaatgactttggcgt 26017527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 43098804 - 43098872
Alignment:
Q  520 caatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||  |||||| |||||||||| |   ||||||||||||| || |||| ||||||||    
T  43098804 caatcaatgactttgaagttgtcaatgttgcagagctagagacatgagtattctgtagacatgaatata 43098872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 7e-29; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 13871575 - 13871446
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||||||||||||||| ||||||| ||| | |||| ||| |||||||||||| |||  ||||||||||||||||| ||| | ||||||||||||     
T  13871575 cgtcttagtgcagtgtttatttgattcaggttggaagatttgctttgagcaagtgcaaatctgatcaatgactttggcgtcgtcaacgttgcagatccgg 13871476  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    |||||||||||||  |||||| ||||||||    
T  13871475 agacatgagtattccggagacatgaatata 13871446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 2304793 - 2304658
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||||| ||||| | |||||||    
T  2304793 cgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcattgtcaacgttgcag 2304694  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||||||| | || |||||||||||    
T  2304693 atccggagacatgagtattctagatacttgaatata 2304658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 23638075 - 23637940
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||| ||| ||||||||      ||||||||||| ||| ||| |||||||||    
T  23638075 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaaatgctgatccaataaatgacaatgactttgacgtcgtcaatgttgcag 23637976  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||||||||||||    
T  23637975 atccggagacatgagtattccggagacttgaatata 23637940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 6419813 - 6419678
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatc------aatgactttggcgttgtccatgttgcag 552  Q
    |||||||||||| |||||||| | ||||| ||||| |||||||| |||| ||||||||| ||||||      |||||||||||||| ||| | |||||||    
T  6419813 cgtcttagtgcaatgtttatttggttcaggttgaaagattagctttgagtaagtgcagacccaatcgatgacaatgactttggcgtcgtcaaagttgcag 6419714  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||||||||||||    
T  6419713 atccggagacatgagtatttcggagacttgaatata 6419678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 1106822 - 1106687
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||| |  |||||||| ||||||| ||||| |||||||| ||||||||||||||||    ||||  ||||||||||||||| ||| | |||||||    
T  1106822 cgtcttagtacgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagatctgatcaatgacaatgactttggcgtcgtcaacgttgcag 1106723  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||||||||||||    
T  1106722 atccggagacatgagtattccggagacttgaatata 1106687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 23654416 - 23654551
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||| |||| |||||||| ||      ||||||||||||||| ||| | |||||||    
T  23654416 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaagagcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 23654515  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||||||||||    
T  23654516 atccggagacatgaggattcaggagacttgaatata 23654551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 892501 - 892579
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||||||||||||| |||||| || || ||||||||||||   |||||||||||||||    
T  892501 agtgcagatccaatcaatgactttggcgttgtccacgttgcaaattcggagacatgagtatcccggagacttgaatata 892579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 459 - 566
Target Start/End: Complemental strand, 8693609 - 8693496
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||| || ||| | |||||||    
T  8693609 cgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaaggacaatgactttggtgtcgtcaacgttgcag 8693510  T
Q  553 atccgaagacatga 566  Q
    ||||| ||||||||    
T  8693509 atccggagacatga 8693496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 4921836 - 4921707
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||| ||| ||||||||| ||| ||| ||||| |||||||| ||||||||||||||||| |||||||||||||  || ||| | |||||||||||      
T  4921836 cgtcttactgcggtgtttatttgatccaggttgaaagattagctttgagcaagtgcagatccgatcaatgactttgttgtcgtcaacgttgcagatccag 4921737  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    ||  |||||||||  || ||||||||||||    
T  4921736 aggtatgagtattccggtgacttgaatata 4921707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 12654258 - 12654129
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||||  ||||||||| |||| || ||||| || ||| | |||||||||| |||||  |||||||||||||||||  || | ||||||||| ||     
T  12654258 cgtcttagtgtggtgtttatttgatttaggttgaaagactagttttgagcaagtgtagatctgatcaatgactttggcgtcatcaacgttgcagattcgg 12654159  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    |||||||||||||  |||||||||||||||    
T  12654158 agacatgagtattccggagacttgaatata 12654129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 31705330 - 31705466
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||||||||||| ||||||||| ||||||| ||||| |||||||| ||| ||||||||||||| ||      |||||||||||| || ||| | ||||||    
T  31705330 tcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaagtgcagatccgatcaatgacaatgactttggtgtcgtcaacgttgca 31705429  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||||||||  |||||| || |||||    
T  31705430 gatccggagacatgagtattccggagacatggatata 31705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 35219868 - 35219733
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| |||||  ||||||| |||||||||||| |||| ||      ||||||||||| ||| ||| | |||||||    
T  35219868 cgtcttagtgcggtgtttatttgattcaggttgaaaaattagctttgagcaagtgcaaatccgatcaatgacaatgactttgacgtcgtcaacgttgcag 35219769  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| | |||||||||||  |||||||||||||||    
T  35219768 atccggaaacatgagtatttcggagacttgaatata 35219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 589
Target Start/End: Complemental strand, 1915141 - 1915011
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||||| | ||||||||| ||||||| ||||| |||||||| ||| |||||||| || || | ||||| |||| ||| ||| || ||||||||||||    
T  1915141 cgtcttagtacggtgtttatttgattcaggttgaaagattagctatgaacaagtgcaaattcagttaatgattttgacgtcgtcaatattgcagatccga 1915042  T
Q  559 agacatgagtattatggagacttgaatatat 589  Q
     |||  || |||||| |||||||||||||||    
T  1915041 ggacgcgaatattatagagacttgaatatat 1915011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 566
Target Start/End: Complemental strand, 15590063 - 15589950
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatga------ctttggcgttgtccatgttgcag 552  Q
    ||||||| ||| ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| ||||||||      ||||||||| ||| |||||||||    
T  15590063 cgtcttaatgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgacaatggctttggcgtcgtcaatgttgcag 15589964  T
Q  553 atccgaagacatga 566  Q
    ||||| ||||||||    
T  15589963 atccggagacatga 15589950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 12481325 - 12481190
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatga------ctttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| |||| || ||||| ||||| || ||| |||| |||||||| ||||||||      ||||||||| ||| | |||||||    
T  12481325 cgtcttagtgcggtgtttatttgatttaggttgaaagattaactttgaacaagagcagatccgatcaatgaaaatgactttggcgtcgtcaacgttgcag 12481226  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||||||||||    
T  12481225 atccggagacatgaggattccggagacttgaatata 12481190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 23101363 - 23101228
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    |||||| |||| || |||||| ||||||| ||||| ||||| || |||||||||||| |||| |||||||||      |||||||| ||| | |||||||    
T  23101363 cgtctttgtgcggtatttatttgattcaggttgaaagattaactttgagcaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 23101264  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||| ||||||||    
T  23101263 atccggagacatgagtattccggagacgtgaatata 23101228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 31937375 - 31937240
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||| ||||||||||||| ||      |||||||||||| || ||| | |||||||    
T  31937375 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaagtgcagatccgatcaatgacaatgactttggtgtcgtcaacgttgcag 31937276  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||| ||||||  |||||| || |||||    
T  31937275 atccggagacataagtattccggagacatggatata 31937240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 32804510 - 32804590
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||||| || |||||||||| |||| || |||||||| ||||   ||||||||||||||    
T  32804510 caagtgcagatccaatcaatgactttggtgtcgtccatgttgtagattcggagacatgaatattccagagacttgaatata 32804590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 587
Target Start/End: Original strand, 8508295 - 8508422
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaa 559  Q
    |||||||||  ||||||||| |||||||||| || |||||| | ||| |||||||||||  ||||||||||||| |||| ||| | |||||||| ||  |    
T  8508295 gtcttagtgtggtgtttatttgattcagattaaaagattagttttgatcaagtgcagattgaatcaatgacttttgcgtcgtcaacgttgcagacccata 8508394  T
Q  560 gacatgagtattatggagacttgaatat 587  Q
     ||||||||||| ||| || ||||||||    
T  8508395 aacatgagtattttggtgatttgaatat 8508422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 4393938 - 4394071
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatca------atgactttggcgttgtccatgttgcagat 554  Q
    ||||||||| ||||||||| || |||| ||||| ||||| || ||| ||||||||||||  ||||      ||||||||||||| ||| | |||||||||    
T  4393938 tcttagtgcggtgtttatttgactcaggttgaaagattaactttgatcaagtgcagatctgatcactgacaatgactttggcgtcgtcaacgttgcagat 4394037  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||||||   ||||||||||||||    
T  4394038 ccggagacatgagtattcatgagacttgaatata 4394071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 471 - 588
Target Start/End: Complemental strand, 1419040 - 1418923
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    ||||||||| |||| |||||||| |||||| | | |||||||| |||| | ||||||||||| ||||| ||| | | |||| |||||||||||||| |||    
T  1419040 gtgtttatttgatttagattgaaagattagatttaagcaagtgtagattcgatcaatgacttcggcgtcgtcaacgctgcaaatccgaagacatgattat 1418941  T
Q  571 tatggagacttgaatata 588  Q
    |  ||| |||||||||||    
T  1418940 ttcggatacttgaatata 1418923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 19402765 - 19402704
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatcc 520  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||||||||    
T  19402765 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatcc 19402704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 587
Target Start/End: Original strand, 27135278 - 27135405
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    |||||||||||  |||||||| |||| | |||||| ||||| || ||||||| || |||| |||||||||| |||| |||  || ||||||||||||||     
T  27135278 cgtcttagtgcgatgtttatttgattta-attgaacgattatctttgagcaaatgtagattcaatcaatgattttgtcgtcatcaatgttgcagatccgg 27135376  T
Q  559 agacatgagtattatggagacttgaatat 587  Q
    ||||| |||||||   |||||||||||||    
T  27135377 agacacgagtattcaagagacttgaatat 27135405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 6296204 - 6296133
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||||||||||||| ||||||| || || ||||| || ||||||| ||||||||| |||||||||    
T  6296204 cgtcttagtgcagtgtttatttgattcaggttaaaagattaactttgagcaaatgcagatccgatcaatgac 6296133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 6303014 - 6302943
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||||||||||||| ||||||| || || ||||| || ||||||| ||||||||| |||||||||    
T  6303014 cgtcttagtgcagtgtttatttgattcaggttaaaagattaactttgagcaaatgcagatccgatcaatgac 6302943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 19760005 - 19760060
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||| |||||||    
T  19760005 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatg 19760060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 5417121 - 5417043
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||| |||||||| || ||||| |||||||||||  | ||||| |||||  |||||||||||||||    
T  5417121 agtgcagatccaatcaaagactttggtgtcgtccacgttgcagatccagatacatgggtatttcggagacttgaatata 5417043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 557
Target Start/End: Complemental strand, 15128024 - 15127979
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||    
T  15128024 tgcagatcaaatcaatgactttggcgttgtccacgttgcagatccg 15127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 516 - 588
Target Start/End: Original strand, 1944319 - 1944391
Alignment:
Q  516 gatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| | |||||||| ||||| |||||| |||||||||||||| |||| || ||| |||||||||    
T  1944319 gatccaatcaataattttggcgtcgtccacgttgcatatccgaagacatgaatattctgaagatttgaatata 1944391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 12576378 - 12576331
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  12576378 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 12576331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 13234005 - 13233950
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||| ||||||||  |||| |||||||||||| |||||||    
T  13234005 agtgcagatccaatcaatgattttggcgtcatccacgttgcagatccggagacatg 13233950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 23843321 - 23843266
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||||| |||||||    
T  23843321 agtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggagacatg 23843266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 587
Target Start/End: Original strand, 12156301 - 12156430
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||| || |||||| ||||||| ||||| || ||  | ||| |||||||| || |||||  |||||||| | | ||| || |||||||||||    
T  12156301 tcgtcttagtgcggtatttatttgattcaggttgaaagactaagtttgaacaagtgcatattcaatccttgactttgacttcgtcaatattgcagatccg 12156400  T
Q  558 aagacatgagtattatggagacttgaatat 587  Q
     ||||||| |||||   |||||||||||||    
T  12156401 gagacatgcgtattccagagacttgaatat 12156430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 571
Target Start/End: Complemental strand, 3610298 - 3610190
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||||| ||||||||  ||||||| |||||   |||||| ||  ||||||||||| ||||||||||  ||| | ||||| | |||| ||||||||||    
T  3610298 tcttagtgcggtgtttatctgattcaggttgaaaagttagctttggacaagtgcagattcaatcaatga--ttgacattgtcaacgttgtagatccgaag 3610201  T
Q  561 acatgagtatt 571  Q
    || ||||||||    
T  3610200 acttgagtatt 3610190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 11426158 - 11426213
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    ||||||||| |||||||||||||||||||  |||| |||| ||||||||| |||||    
T  11426158 agtgcagattcaatcaatgactttggcgtcatccacgttgtagatccgaaaacatg 11426213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 588
Target Start/End: Original strand, 30813304 - 30813367
Alignment:
Q  525 aatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||| ||| | |||||||||||| ||||||||| |||   ||||||||||||||    
T  30813304 aatgactttggcgtcgtcaacgttgcagatccggagacatgaggatttcagagacttgaatata 30813367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 548763 - 548685
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||| ||||||||||  |||| | |||||||| | |||||||| ||||  ||||| || ||||||    
T  548763 agtgcagatccaatcaattactttggcgtcatccacgctgcagatctggagacatgattattccggagatttaaatata 548685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 33194811 - 33194889
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| ||| |||||||||||||||  |  |||| |||| |||| || ||||||| ||||| ||||||||||||||||    
T  33194811 agtgcaaatctaatcaatgactttggtttcttccacgttgtagattcggagacatgggtattctggagacttgaatata 33194889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 588
Target Start/End: Original strand, 31395452 - 31395545
Alignment:
Q  495 gattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| | ||||||||||||||| || | ||| | |||||||||||| | ||||||||| || ||| |||||| || || ||| |||||||||    
T  31395452 gattagttttgagcaagtgcagattcagttaataattttggcgttgtcaacgttgcagattcggagaaatgagttttctgaagaattgaatata 31395545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 588
Target Start/End: Complemental strand, 19402712 - 19402672
Alignment:
Q  548 tgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| |||||||||||||  |||||||||||||||    
T  19402712 tgcagatccggagacatgagtattccggagacttgaatata 19402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 509 - 588
Target Start/End: Complemental strand, 2341 - 2262
Alignment:
Q  509 aagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||    
T  2341 aagtgcagatccgatcaatgactttggcgtcgtcaatgttgcagatccggagacatgagtattctggagacttgaatata 2262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 25962084 - 25962214
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||| ||||||| ||||| |||||| | ||||||||||||||||  |||||||||||| |||| ||| | |||| |||||||    
T  25962084 tcgtcttagtgcagtgtttatttgattcaggttgaaagattagttttgagcaagtgcagatctgatcaatgacttttgcgtcgtcaacgttgtagatccg 25962183  T
Q  558 aagacatgagtattatggagacttgaatata 588  Q
     |||||||  ||||  ||| |||||||||||    
T  25962184 gagacatggatattccggaaacttgaatata 25962214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 17687373 - 17687500
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||||| | ||||||||| ||||||||||||| |||||  | ||||||| |||| |||| ||||||||||||| |||  || |||||||||||||| ||    
T  17687373 tcttagtacggtgtttatttgattcagattgaaagattaaatttgagcaaatgcatatccgatcaatgactttgacgtcatcaatgttgcagatccggag 17687472  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    ||||||||||| |||  |||||||||||    
T  17687473 acatgagtattctggtaacttgaatata 17687500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 464 - 590
Target Start/End: Original strand, 39915664 - 39915790
Alignment:
Q  464 tagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagaca 563  Q
    |||||| |||||||||  |||||| ||||| |||||||| |||||||||||| ||||||||||| |||||| ||| ||| | |||| |||| || |||||    
T  39915664 tagtgcggtgtttattttattcaggttgaaagattagctttgagcaagtgcatatccaatcaataactttgacgtcgtcaacgttgaagattcggagaca 39915763  T
Q  564 tgagtattatggagacttgaatatatg 590  Q
    || ||||| | ||||||||||||||||    
T  39915764 tgtgtattctagagacttgaatatatg 39915790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 6635414 - 6635549
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||  ||||| |||||||| ||||||| ||||||||| ||      ||||||||||||||| ||| | |||||||    
T  6635414 cgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaaatgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 6635513  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  ||||| |||||||||    
T  6635514 atccggagacatgagtattccggagatttgaatata 6635549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 466 - 586
Target Start/End: Complemental strand, 178051 - 177926
Alignment:
Q  466 gtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caat--caatgactttggcgttgtccatgttgcagatccgaa 559  Q
    |||| ||||||||| ||||||| ||||| |||||||| |||||||||| |||||    ||||  ||||||||||||||||||| | |||||||||||| |    
T  178051 gtgcggtgtttatttgattcaggttgaaagattagct-tgagcaagtgtagatctgatcaatgacaatgactttggcgttgtcaacgttgcagatccgga 177953  T
Q  560 gacatgagtattatggagacttgaata 586  Q
    ||||||||||||  |||||||||||||    
T  177952 gacatgagtattccggagacttgaata 177926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 7771774 - 7771641
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||| ||||||||| ||||||  ||||| ||||| || ||||||||||||||||| ||      ||||||||||||||| ||| | |||||||||    
T  7771774 tcttagtgcggtgtttatttgattcaagttgaaagattaactttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcagat 7771675  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||||||  |||||| ||||||||    
T  7771674 ccggagacatgagtattccggagacatgaatata 7771641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 461 - 586
Target Start/End: Original strand, 12215301 - 12215425
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||| ||| ||||||||| |||| || ||||| |||||| | |||||||||||| |||| |||||||||||| |||| ||| | ||||||||||||| |    
T  12215301 tcttaatgcggtgtttatttgatttag-ttgaaagattagttttgagcaagtgcatatccgatcaatgacttttgcgtcgtcaacgttgcagatccgacg 12215399  T
Q  561 acatgagtattatggagacttgaata 586  Q
    |||||||||||| | | |||||||||    
T  12215400 acatgagtattacgaaaacttgaata 12215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 39531352 - 39531232
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatga----ctttggcgttgtccatgttgcagatccgaagacatgag 567  Q
    |||||||| ||||| | ||||| |||||||| |||| |||||||||||| ||||||||    ||||||||| ||| | |||||||||||  |||||||||    
T  39531352 tgtttatttgattcgggttgaaagattagctttgagaaagtgcagatccgatcaatgaatgactttggcgtcgtcaacgttgcagatccagagacatgag 39531253  T
Q  568 tattatggagacttgaatata 588  Q
    ||||  |||||||||||||||    
T  39531252 tattccggagacttgaatata 39531232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 571
Target Start/End: Complemental strand, 23882070 - 23881953
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcaga 553  Q
    |||||||||| ||||||||| ||||||| ||||| ||||| || ||||||||| ||||||| |||||||||      |||||||| ||| |||||| |||    
T  23882070 gtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtacagatccgatcaatgacaatgactttggcgtcgtcaatgttgtaga 23881971  T
Q  554 tccgaagacatgagtatt 571  Q
    |||| |||||||||||||    
T  23881970 tccggagacatgagtatt 23881953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 33164423 - 33164289
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac-----tttggcgttgtccatgttgcaga 553  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||| |||| |||||||| |||||||||      || |||| ||| | ||||||||    
T  33164423 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaagagcagatccgatcaatgacaatgactttgcgtcgtcaacgttgcaga 33164324  T
Q  554 tccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||||||| |||  |||||||||||||||    
T  33164323 tccggagacatgaggattccggagacttgaatata 33164289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 565
Target Start/End: Original strand, 11858076 - 11858186
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatc----caatcaatgactttggcgttgtccatgttgcagat 554  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||| || ||||||||||||||||    | ||||||||||| ||||| ||| | |||||||||    
T  11858076 cgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagatccgatcgatcaatgacttaggcgtcgtcaacgttgcagat 11858175  T
Q  555 ccgaagacatg 565  Q
    ||| |||||||    
T  11858176 ccggagacatg 11858186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 17523477 - 17523348
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||||| ||| ||||||||| ||||||| | ||| |||||| | ||| |||||||| || |||| ||||||||| || ||||| | |||||||||||||    
T  17523477 cgtcttattgcggtgtttatttgattcaggtcgaaagattagttttgatcaagtgcaaattcaattaatgacttttgcattgtcaacgttgcagatccga 17523378  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    | |||||||||||  || | ||||||||||    
T  17523377 aaacatgagtatttcggtggcttgaatata 17523348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 23428417 - 23428553
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgca 551  Q
    |||||||||||| ||||||||| ||||||| | ||| |||||||| |||||||||| |||||| ||      ||||||||||||||| ||| | |||| |    
T  23428417 tcgtcttagtgcggtgtttatttgattcaggtagaaagattagctttgagcaagtgtagatccgatcaatgacaatgactttggcgtcgtcaacgttgta 23428516  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||||||||  |||||| | ||||||    
T  23428517 gatccggagacatgagtatttcggagacataaatata 23428553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 2555305 - 2555170
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  ||||||||| ||||||| |||||  ||||||| |||| |||||||||||| ||      ||||||||||| |||  || | |||||||    
T  2555305 cgtcttagtgtggtgtttatttgattcaggttgaaatattagctttgagaaagtgcagatccgatcaatgacaatgactttgacgtcatcaacgttgcag 2555206  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||||||||||||    
T  2555205 atccggagacatgagtattccggagacttgaatata 2555170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 6281210 - 6281345
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||||||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      |||||||||||||||  ||  ||||||||    
T  6281210 cgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcatcattgttgcag 6281309  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||| |||||||||  | |||| ||||||||    
T  6281310 atccggagaaatgagtattccgaagacatgaatata 6281345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 510 - 586
Target Start/End: Original strand, 25770823 - 25770899
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaata 586  Q
    ||||||||| ||||| ||||||||||||| ||| ||||||||||| ||||| ||||| ||||||| |||||||||||    
T  25770823 agtgcagattcaatcgatgactttggcgtcgtcaatgttgcagattcgaaggcatgactattatgaagacttgaata 25770899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 980984 - 980913
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||||||| | |||||||    
T  980984 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgagcaatgac 980913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 14535066 - 14535193
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaag 560  Q
    ||||| ||| ||||||||| ||||| ||||||| |||| ||| ||| |||||| |||| |||||||||||||| ||||  || | |||||||||||| |     
T  14535066 tcttaatgcggtgtttatttgattcggattgaaagattggctttgatcaagtgtagattcaatcaatgacttttgcgtcatcaacgttgcagatccggat 14535165  T
Q  561 acatgagtattatggagacttgaatata 588  Q
    ||||||||||| | | | ||||||||||    
T  14535166 acatgagtattcttgtggcttgaatata 14535193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 17331494 - 17331629
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatcc----aat--caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||| | ||| |||| ||||||||    |||  |||||||||||| || ||| | |||||||    
T  17331494 cgtcttagtgcggtgtttatttgattcaggttgaaagattagttttgaacaagagcagatccgaccaatgacaatgactttggtgtcgtcaacgttgcag 17331593  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| ||||||||| |||  |||||||||||||||    
T  17331594 atccggagacatgaggattccggagacttgaatata 17331629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 472 - 585
Target Start/End: Complemental strand, 35275928 - 35275815
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||| | ||||| | |||||| ||||||||| |||||||||||||| |||||||||| ||| | | |||||||  | |||||||  ||||    
T  35275928 tgtttatttgattccggttgaaaggttagctttgagcaagtacagatccaatcaataactttggcgtcgtcaacgatgcagatatggagacatggttatt 35275829  T
Q  572 atggagacttgaat 585  Q
     |||||||||||||    
T  35275828 ctggagacttgaat 35275815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 568
Target Start/End: Original strand, 17699719 - 17699834
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatg------actttggcgttgtccatgttgcag 552  Q
    ||||||||||||  ||||||| ||||||| ||||| |||||||| ||||||||| ||||||  |||||||      |||||||||| ||| |||||||||    
T  17699719 cgtcttagtgcatcgtttatttgattcaggttgaaagattagctttgagcaagtacagatctgatcaatgacaataactttggcgtcgtcaatgttgcag 17699818  T
Q  553 atccgaagacatgagt 568  Q
    ||||| ||| ||||||    
T  17699819 atccggagaaatgagt 17699834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 516 - 588
Target Start/End: Original strand, 28500912 - 28500984
Alignment:
Q  516 gatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||| |||  |||| |||||||||||| ||||||| ||||| ||||||| ||||||||    
T  28500912 gatccaatcaatgactttgtcgtcctccacgttgcagatccggagacatgggtattctggagacatgaatata 28500984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 29097955 - 29098090
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| |||||  ||||||| ||| |||| |||||||| |||||||||      |||||||| ||| | |||||||    
T  29097955 cgtcttagtgcggtgtttatttgattcaggttgaaaaattagctttgaacaagagcagatccgatcaatgacaatgattttggcgtcgtcaacgttgcag 29098054  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    |||   ||||||||| |||  |||||||||||||||    
T  29098055 atcaagagacatgaggattccggagacttgaatata 29098090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 11734774 - 11734703
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||||  |||||||| ||||||||||||| |||||||| || |||| ||||||||| |||||||||    
T  11734774 cgtcttagtgcgatgtttatttgattcagattgaaagattagctttgcgcaactgcagatccgatcaatgac 11734703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 20483352 - 20483470
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||| | ||||||||| || |||  ||||| |||||||| ||| ||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  20483352 cgtcttagtacggtgtttatttgactcaagttgaaagattagctttgatcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 20483451  T
Q  553 atccgaagacatgagtatt 571  Q
    ||| |||||||||||||||    
T  20483452 atctgaagacatgagtatt 20483470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 461 - 588
Target Start/End: Complemental strand, 17732339 - 17732206
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgcagat 554  Q
    ||||||||| ||||||||| ||||||  ||||| |||||||| |||||||||| | |||| |||||||||      |||||||| ||| |  ||||||||    
T  17732339 tcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgtaaatccgatcaatgacaatgactttggcgtcgtcaaccttgcagat 17732240  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
    ||| |||||||||||||  |||||  ||||||||    
T  17732239 ccgtagacatgagtatttcggagagatgaatata 17732206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 461 - 588
Target Start/End: Original strand, 28040797 - 28040930
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaa------tgactttggcgttgtccatgttgcagat 554  Q
    ||||||||  ||||||||| ||||||| || ||  |||||||||||||||||||| |||| |||||      |||||||||||| ||| |  ||||||||    
T  28040797 tcttagtgtggtgtttatttgattcaggtttaaatattagctctgagcaagtgcaaatccgatcaatgacagtgactttggcgtcgtcaacattgcagat 28040896  T
Q  555 ccgaagacatgagtattatggagacttgaatata 588  Q
     || ||||||| ||||||||||||| | ||||||    
T  28040897 tcggagacatgtgtattatggagacataaatata 28040930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 28389005 - 28388927
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||| ||||| ||||||||||||||| || |||||||||||||||||  ||| ||| |||||  |||||||||||||||    
T  28389005 agtgaagatcaaatcaatgactttggtgtcgtccatgttgcagatccagagatatgggtattccggagacttgaatata 28388927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 29154437 - 29154515
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||| ||||| ||||| ||  ||||||||||||||||| |||||||||||||  ||||| || ||||||    
T  29154437 agtgcagatccaattaatgattttggtgtcatccatgttgcagatccggagacatgagtattccggagagttaaatata 29154515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 587
Target Start/End: Complemental strand, 26905593 - 26905464
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||| ||  ||||||||| ||||||| | |||  |||| || |||| || ||||||| |||||||||||||| | |||||| | |||| |||||      
T  26905593 tcgtcttaatgtggtgtttatttgattcaggtggaaatattatctttgaggaaatgcagattcaatcaatgactttagtgttgtcaacgttgtagatcaa 26905494  T
Q  558 aagacatgagtattatggagacttgaatat 587  Q
     |  ||||||||||||||||||||||||||    
T  26905493 gatgcatgagtattatggagacttgaatat 26905464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 568
Target Start/End: Complemental strand, 3079289 - 3079174
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    |||||||||||  |||||||| |||||   ||||| |||| ||| ||||||||||||||||| ||      ||||||||||||||| ||| | |||||||    
T  3079289 cgtcttagtgcgatgtttatttgattcgagttgaaagatttgctttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcag 3079190  T
Q  553 atccgaagacatgagt 568  Q
    ||| ||||||||||||    
T  3079189 atctgaagacatgagt 3079174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 6647812 - 6647732
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||||||||||||| |||||  || | |||||||||||| |||||||  ||||  |||||||| ||||||    
T  6647812 caagtgcagatccaatcaatgacttcggcgtcatcaacgttgcagatccggagacatggatattccggagactttaatata 6647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 19645940 - 19645861
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||||| ||  |||| |||||| |||||||||||||  ||||  ||||| |||||||||    
T  19645940 caagtgcagatccaatcaatgactttggtgtcatccacgttgca-atccgaagacatggttattccggagatttgaatata 19645861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 510 - 570
Target Start/End: Original strand, 34874078 - 34874138
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    |||||||||||||| |||||||||||||| ||| | |||||| ||||| ||||||||||||    
T  34874078 agtgcagatccaatgaatgactttggcgtcgtcaacgttgcatatccggagacatgagtat 34874138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 4070768 - 4070815
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  4070768 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 4070815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 512 - 571
Target Start/End: Original strand, 5378521 - 5378580
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||||||||||||||||  |||| |||||||||||| |||||||| ||||    
T  5378521 tgcagatcaaatcaatgactttggcgtcatccacgttgcagatccggagacatgactatt 5378580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 6887075 - 6887028
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  6887075 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 6887028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 9034839 - 9034784
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||| ||  | |||||||||||||| ||||||||    
T  9034839 agtgcagatccaatcaatgactttggggtcattcatgttgcagatccaaagacatg 9034784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 10924031 - 10923984
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  10924031 agtgcagatccaatcaacgactttggcgttatccacgttgcagatccg 10923984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 520
Target Start/End: Original strand, 12891844 - 12891903
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatcc 520  Q
    ||||||||| ||||||||| ||| ||| ||||| |||||||| |||||||||||||||||    
T  12891844 tcttagtgcggtgtttatttgatccaggttgaaagattagctttgagcaagtgcagatcc 12891903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 26295012 - 26294941
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||||| ||||||||| ||||||| |||||  ||||| | ||||||||||||||||  |||||||||    
T  26295012 cgtcttagtgcggtgtttatttgattcaggttgaaatattagttttgagcaagtgcagatctgatcaatgac 26294941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 28618819 - 28618866
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  28618819 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 28618866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 29310251 - 29310204
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  29310251 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 29310204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 32347669 - 32347551
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||| | |||||||||  |||||  ||||| |||||||| ||||||||||||||||| ||      |||| |||||||||| ||| |  ||||||    
T  32347669 cgtcttagtacggtgtttatttaattcaagttgaaagattagctttgagcaagtgcagatccgatcgatgacaataactttggcgtcgtcaacattgcag 32347570  T
Q  553 atccgaagacatgagtatt 571  Q
    ||||| |||||||||||||    
T  32347569 atccggagacatgagtatt 32347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 530
Target Start/End: Original strand, 34431227 - 34431295
Alignment:
Q  460 gtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||||||| ||||||||| ||||||| ||||  ||||| || ||||||||||||||||| |||||||||    
T  34431227 gtcttagtgcggtgtttatttgattcaggttga--gattaactttgagcaagtgcagatccgatcaatgac 34431295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 530
Target Start/End: Original strand, 43494030 - 43494097
Alignment:
Q  463 ttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||| ||||||||| ||||||| ||||| || || || |||||||||||| ||||||||||||||    
T  43494030 ttagtgcggtgtttatttgattcaggttgaaagactaactttgagcaagtgcatatccaatcaatgac 43494097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 4726825 - 4726747
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||||||||||||||||| ||  || | |||||||||||| |||||||| ||||  ||||| || ||||||    
T  4726825 agtgcagatccaatcaatgactttggtgtcatctacgttgcagatccggagacatgactattccggagatttaaatata 4726747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 18653953 - 18654019
Alignment:
Q  464 tagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    |||||| ||||||||| ||||||| |||||  ||||| | ||||||||||||||||| |||||||||    
T  18653953 tagtgcggtgtttatttgattcaggttgaaaaattaggtttgagcaagtgcagatccgatcaatgac 18654019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 588
Target Start/End: Original strand, 32309345 - 32309459
Alignment:
Q  474 tttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattat 573  Q
    |||||| ||||||| ||| | ||||| || |||||||||||| ||| ||||||||||||| | || ||| | ||| |||||  |||||||||| ||||      
T  32309345 tttatttgattcaggttgtaagattaactttgagcaagtgcaaatcgaatcaatgacttttgtgtcgtcaacgttacagattggaagacatgaatattcc 32309444  T
Q  574 ggagacttgaatata 588  Q
    || ||||||||||||    
T  32309445 ggtgacttgaatata 32309459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 34844133 - 34844211
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||||||||||| || ||| |||||||||| ||| ||| ||| ||||| ||| ||||| ||||||    
T  34844133 agtgcagatcaaatcaatgactttggagtcgtcaatgttgcagacccggagatatgggtattctggcgacttaaatata 34844211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 34866655 - 34866725
Alignment:
Q  517 atccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    ||||||||||| | |||| ||| ||| |||||||||||||| |||||||| ||||  ||||||||||||||    
T  34866655 atccaatcaataattttgacgtcgtcaatgttgcagatccggagacatgaatatttcggagacttgaatat 34866725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 41554704 - 41554782
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| |||||||||||||||  | ||| | |||||||||||| ||||||| |||||  |||||||| ||||||    
T  41554704 agtgcagatcaaatcaatgactttggaatcgtcaacgttgcagatccggagacatgggtattccggagacttaaatata 41554782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 587
Target Start/End: Complemental strand, 33486466 - 33486389
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    |||||||||| || |||||||||||| || ||| | |||||||||||| || |||| ||||| ||||||||| |||||    
T  33486466 agtgcagatcaaaccaatgactttggagtcgtcaacgttgcagatccggaggcatgggtattctggagacttaaatat 33486389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 37219231 - 37219291
Alignment:
Q  521 aatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagactt 581  Q
    ||||||||||||||| || ||| |||||||||||||| ||||||| |||||  ||||||||    
T  37219231 aatcaatgactttggagtcgtcaatgttgcagatccggagacatgtgtattgcggagactt 37219291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 588
Target Start/End: Complemental strand, 42396397 - 42396333
Alignment:
Q  524 caatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||| ||| | |||||||||||  ||||||||||||| | ||||| ||||||||    
T  42396397 caatgactttggcgtcgtcaacgttgcagatcctgagacatgagtattcttgagacatgaatata 42396333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 588
Target Start/End: Complemental strand, 14910562 - 14910495
Alignment:
Q  521 aatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    ||||||||||||||  |||||| | | |||||||||| |||||||||||||  |||||||| ||||||    
T  14910562 aatcaatgactttgaagttgtcaacgatgcagatccggagacatgagtattccggagacttaaatata 14910495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 31646046 - 31646093
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  31646046 agtgcagatccaatcaatgactttggtgtcatccacgttgcagatccg 31646093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 35906486 - 35906533
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  ||||  |||||||||||    
T  35906486 agtgcagatccaatcaatgactttggcgtcatccacattgcagatccg 35906533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 20270931 - 20271009
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||||||||||| ||  || | |||||||||||| |||||||  ||||  |||||||| ||||||    
T  20270931 agtgcagatcaaatcaatgactttggagtcttcaacgttgcagatccggagacatggatatttcggagacttaaatata 20271009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 6681832 - 6681696
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac------tttggcgttgtccatgttgca 551  Q
    ||||||||||||  |||||||| | | ||| ||||| |||||| | |||| ||| ||| |||| |||||||||      ||||| || ||| | ||||||    
T  6681832 tcgtcttagtgcgatgtttatttgttccaggttgaaagattagttttgagtaagcgcaaatccgatcaatgacaatgattttggtgtcgtcaacgttgca 6681733  T
Q  552 gatccgaagacatgagtattatggagacttgaatata 588  Q
    ||| || |||||||||||||  |||||||||||||||    
T  6681732 gattcggagacatgagtattccggagacttgaatata 6681696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 588
Target Start/End: Original strand, 7150990 - 7151106
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||||| ||||| || | | | |||| |||| || || | |||||||||||||||||  || | |||||||||||  |||||| ||||||    
T  7150990 tgtttatttgattcaggttgaaagactggttttgagtaagtacaaattcgatcaatgactttggcgtcatcaacgttgcagatccagagacattagtatt 7151089  T
Q  572 atggagacttgaatata 588  Q
      | |||||||||||||    
T  7151090 ccgaagacttgaatata 7151106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 538
Target Start/End: Complemental strand, 20146116 - 20146088
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgt 538  Q
    |||||||||||||||||||||||||||||    
T  20146116 agtgcagatccaatcaatgactttggcgt 20146088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 564
Target Start/End: Original strand, 41358248 - 41358300
Alignment:
Q  512 tgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    ||||||| ||||||||||||||| ||| ||| | ||| |||||||||||||||    
T  41358248 tgcagattcaatcaatgactttgacgtcgtcaacgttacagatccgaagacat 41358300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 7079 - 6950
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccga 558  Q
    ||||| |||||||||||||||  |||| | || || ||||||||  |||||||||||||||| ||||||||||||||||| ||  | ||||||||||||     
T  7079 cgtctaagtgcagtgtttatttaattcgggttaaaagattagcttggagcaagtgcagatccgatcaatgactttggcgtcgttaacgttgcagatccgg 6980  T
Q  559 agacatgagtattatggagacttgaatata 588  Q
    ||||||||||||| | ||||| ||||||||    
T  6979 agacatgagtattcttgagacatgaatata 6950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 510 - 587
Target Start/End: Complemental strand, 1038 - 961
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||| ||||||||||||| || ||||||||||||    
T  1038 agtgcagatccaatcaatgacattagcgtcgtccatgttgcagatccggagacatgagtattctgaagacttgaatat 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 471 - 588
Target Start/End: Complemental strand, 404197 - 404081
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtat 570  Q
    ||||||||| ||||||| ||||| ||| |||| |||||| |||||||| | ||||||||||||| ||||||| |  ||||||||||||||||||||||||    
T  404197 gtgtttatttgattcaggttgaaagat-agctttgagcatgtgcagattcgatcaatgactttgacgttgtcaacattgcagatccgaagacatgagtat 404099  T
Q  571 tatggagacttgaatata 588  Q
    |  |||||| | ||||||    
T  404098 ttcggagacataaatata 404081  T

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Target: scaffold1350 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 1740 - 1875
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||| ||||||| ||      ||||||||||||| | ||| | |||||||    
T  1740 cgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtacagatccgatcaatgacaatgactttggcatcgtcaacgttgcag 1839  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||  | ||||||| |||  |||||||||||||||    
T  1840 atccagatacatgaggattccggagacttgaatata 1875  T

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Target: scaffold0155 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 458 - 587
Target Start/End: Original strand, 35249 - 35384
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatca------atgactttggcgttgtccatgttgca 551  Q
    |||||||||||| ||||||||| |||| || |||||  ||||||| |||||||||||| |||| | ||      ||||||||||||| ||| | ||||||    
T  35249 tcgtcttagtgcggtgtttatttgatttaggttgaaatattagctttgagcaagtgcaaatccgaccattgacaatgactttggcgtcgtcaacgttgca 35348  T
Q  552 gatccgaagacatgagtattatggagacttgaatat 587  Q
    |||||| | |||||||||||  ||||||||||||||    
T  35349 gatccggatacatgagtattccggagacttgaatat 35384  T

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Target: scaffold0121 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 13200 - 13065
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||  ||||||||| ||||||| ||||| |||||||| |||||||||||| |||| ||      ||||||||||| ||| ||| | |||||||    
T  13200 cgtcttagtgaggtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgacaatgactttgacgtcgtcaacgttgcag 13101  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||||| |||||||||||||  |||||  ||||||||    
T  13100 atccgtagacatgagtattccggagatatgaatata 13065  T

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Target: scaffold1379 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 463 - 570
Target Start/End: Complemental strand, 1034 - 927
Alignment:
Q  463 ttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagac 562  Q
    ||||||| |||| |||| ||||||| ||||| |||||||| |||| || ||||||| | |||||||||||||| ||  || | |||||||||||| ||||    
T  1034 ttagtgcggtgtatatttgattcaggttgaaagattagctttgagaaactgcagattcgatcaatgactttggtgtcatcaacgttgcagatccggagac 935  T
Q  563 atgagtat 570  Q
    ||||||||    
T  934 atgagtat 927  T

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Target: scaffold1379; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 515
Target Start/End: Original strand, 143 - 197
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgca 515  Q
    ||||||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||    
T  143 tcttagtgctgtgtttatttgattcaggttgaaagattagctttgagcaagtgca 197  T

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Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 588
Target Start/End: Original strand, 74344 - 74465
Alignment:
Q  473 gtttattagattcagattgaaggattagctctgagcaagtgcagatccaat------caatgactttggcgttgtccatgttgcagatccgaagacatga 566  Q
    ||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||      ||||||||||||| | ||| | |||||||||||| ||||||||    
T  74344 gtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgacaatgactttggcatcgtcaacgttgcagatccggagacatga 74443  T
Q  567 gtattatggagacttgaatata 588  Q
    |||||  | |||| ||||||||    
T  74444 gtattccgaagacatgaatata 74465  T

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Target: scaffold0999 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 487 - 588
Target Start/End: Original strand, 1898 - 1999
Alignment:
Q  487 gattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaata 586  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||  || | ||||||||||   |||||| ||||||  |||||| ||| ||    
T  1898 gattgaaagattagctttgagcaagtgcagatccgatcaatgactttggcgtcatcaacgttgcagatcgagagacataagtattccggagacatgatta 1997  T
Q  587 ta 588  Q
    ||    
T  1998 ta 1999  T

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Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 4022 - 3887
Alignment:
Q  459 cgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatc------aatgactttggcgttgtccatgttgcag 552  Q
    ||||||||||| |||||||||  |||||| |||||  ||||||| ||||||||||||||||  |||      |||||||||||| | ||| | |||||||    
T  4022 cgtcttagtgcggtgtttatttaattcaggttgaaatattagctttgagcaagtgcagatctgatcaatgaaaatgactttggcatcgtcaacgttgcag 3923  T
Q  553 atccgaagacatgagtattatggagacttgaatata 588  Q
    ||| | ||||||||||||| | || |||||||||||    
T  3922 atctggagacatgagtattttagaaacttgaatata 3887  T

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Target: scaffold0722 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 5423 - 5368
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||| |||||||    
T  5423 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatg 5368  T

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Target: scaffold0316 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 12100 - 12045
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||| |||||||    
T  12100 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatg 12045  T

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Target: scaffold0665 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 564
Target Start/End: Complemental strand, 1024 - 970
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacat 564  Q
    |||||||||||||||||||||||||||||  |||| |||||||||| ||||||||    
T  1024 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatctgaagacat 970  T

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Target: scaffold0542 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 538
Target Start/End: Original strand, 3947 - 4027
Alignment:
Q  458 tcgtcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgt 538  Q
    |||||||| ||  ||||||||| |||||| ||| || ||||| || ||| |||||||||||||||||||| ||||||||||    
T  3947 tcgtcttattgtggtgtttatttgattcaaattaaaagattatctttgatcaagtgcagatccaatcaataactttggcgt 4027  T

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Target: scaffold0219 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 21191 - 21271
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||| ||||||||||||| ||||||||   | | ||||| ||| || ||||||||||||| ||||||||||||||||    
T  21191 caagtgcaaatccaatcaatgattttggcgtcaacgacgttgccgattcggagacatgagtattctggagacttgaatata 21271  T

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Target: scaffold0536 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 530
Target Start/End: Original strand, 3078 - 3137
Alignment:
Q  471 gtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgac 530  Q
    ||||||||| ||||||| ||||| |||||||| ||| ||||||||||||| |||||||||    
T  3078 gtgtttatttgattcaggttgaaagattagctttgaacaagtgcagatccgatcaatgac 3137  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 36741 - 36788
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||    
T  36741 agtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 36788  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 571
Target Start/End: Complemental strand, 201993 - 201894
Alignment:
Q  472 tgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||| ||||||| |||||  ||||||| ||| |||||| | || |||||||||| |||||||||||| |  ||||||||||   ||||||||||||    
T  201993 tgtttatttgattcaggttgaaatattagctttgaacaagtgaaaattcaatcaatgattttggcgttgtcaacattgcagatccagtgacatgagtatt 201894  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 587
Target Start/End: Complemental strand, 91285 - 91224
Alignment:
Q  526 atgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatat 587  Q
    ||||||||||||||||||| ||||||||| ||  ||||||||||||  ||| ||||||||||    
T  91285 atgactttggcgttgtccacgttgcagattcggtgacatgagtattccggacacttgaatat 91224  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 136973 - 136893
Alignment:
Q  508 caagtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||||| |||||| |||||||| || ||| | |||||||||||  ||||||| |||||  |||||||| ||||||    
T  136973 caagtgcagatcaaatcaacgactttggagtcgtcaacgttgcagatccagagacatgggtattccggagacttaaatata 136893  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 9555 - 9508
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccg 557  Q
    ||||||||| |||||||||||||||||||  |||| ||||||||||||    
T  9555 agtgcagattcaatcaatgactttggcgtcatccacgttgcagatccg 9508  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 11231 - 11286
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatg 565  Q
    |||||| |||||||||||||||||| |||  |||| |||||||||||| |||||||    
T  11231 agtgcatatccaatcaatgactttgacgtcatccacgttgcagatccggagacatg 11286  T

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Target: scaffold1294 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Original strand, 992 - 1070
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||| |||||||||||||||||| ||| ||| |||||||| ||||| | ||||| |||||  |  ||||||||||||    
T  992 agtgcacatccaatcaatgactttgacgtcgtcaatgttgcatatccgcatacatgggtattccgatgacttgaatata 1070  T

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Target: scaffold0340 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 11673 - 11595
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtattatggagacttgaatata 588  Q
    |||||||||| ||||||||| ||||| || ||| | |||||||||||  | ||||| ||||| ||||||||| ||||||    
T  11673 agtgcagatcaaatcaatgattttggagtcgtcaacgttgcagatccagaaacatgggtattctggagacttaaatata 11595  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 571
Target Start/End: Original strand, 244853 - 244914
Alignment:
Q  510 agtgcagatccaatcaatgactttggcgttgtccatgttgcagatccgaagacatgagtatt 571  Q
    |||||||||||||||||||||||||||||  |||| |||| |||| || ||| |||| ||||    
T  244853 agtgcagatccaatcaatgactttggcgtcatccacgttgtagattcggagatatgattatt 244914  T

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Target: scaffold0202 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 533
Target Start/End: Complemental strand, 22579 - 22507
Alignment:
Q  461 tcttagtgcagtgtttattagattcagattgaaggattagctctgagcaagtgcagatccaatcaatgacttt 533  Q
    |||||||||||||| |||| ||||| | ||| | |||||| | ||| ||||||||||| ||||||| ||||||    
T  22579 tcttagtgcagtgtgtatttgattctggttgtaagattagttttgatcaagtgcagattcaatcaacgacttt 22507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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