View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12139_high_9 (Length: 214)
Name: NF12139_high_9
Description: NF12139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12139_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 45850335 - 45850195
Alignment:
| Q |
21 |
gttacattaacacatctgcctcatcatgtgtgaagttacgagtacgagagacaagagagaaataaggatgttacattaaaaactgaagtattaannnnnn |
120 |
Q |
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| T |
45850335 |
gttacattaacacatctgcctcatcatgtgtgaagttacgagtacgagagacaagagagaaataaggatgttacattaaaaactgaagtattaatttttt |
45850236 |
T |
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| Q |
121 |
naataaacaatctttcaatatagaatccttaaagagtgtct |
161 |
Q |
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| T |
45850235 |
taataaacaatctttcaatatagaatccttaaagagtgtct |
45850195 |
T |
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