View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1213_high_25 (Length: 445)

Name: NF1213_high_25
Description: NF1213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1213_high_25
NF1213_high_25
[»] chr5 (51 HSPs)
chr5 (28-299)||(43362611-43362883)
chr5 (299-445)||(16407641-16407787)
chr5 (299-445)||(26177466-26177612)
chr5 (299-445)||(9789663-9789809)
chr5 (298-445)||(26170356-26170503)
chr5 (299-445)||(16409077-16409223)
chr5 (299-445)||(18442087-18442233)
chr5 (299-445)||(24136338-24136484)
chr5 (299-418)||(15465006-15465125)
chr5 (298-440)||(29719964-29720106)
chr5 (299-418)||(36931843-36931962)
chr5 (299-440)||(29722152-29722293)
chr5 (298-445)||(9352806-9352953)
chr5 (299-415)||(29752274-29752390)
chr5 (308-440)||(30631808-30631940)
chr5 (308-440)||(27450269-27450401)
chr5 (308-440)||(1456646-1456778)
chr5 (308-440)||(27445426-27445558)
chr5 (299-418)||(29751605-29751724)
chr5 (308-440)||(15045140-15045271)
chr5 (308-440)||(29402558-29402690)
chr5 (308-440)||(43599177-43599310)
chr5 (308-440)||(43604669-43604802)
chr5 (308-440)||(43610161-43610294)
chr5 (299-440)||(22536712-22536852)
chr5 (308-440)||(28807084-28807216)
chr5 (299-440)||(10592844-10592983)
chr5 (380-445)||(38219884-38219949)
chr5 (299-440)||(40379678-40379818)
chr5 (299-350)||(35388195-35388246)
chr5 (299-440)||(16546216-16546356)
chr5 (299-440)||(40381889-40382029)
chr5 (306-440)||(37556131-37556265)
chr5 (306-440)||(37560953-37561087)
chr5 (307-440)||(25077713-25077846)
chr5 (307-440)||(25135682-25135815)
chr5 (362-440)||(31180709-31180787)
chr5 (308-349)||(31180781-31180822)
chr5 (383-440)||(43592732-43592789)
chr5 (308-349)||(43592805-43592846)
chr5 (378-418)||(35388159-35388199)
chr5 (307-445)||(11916452-11916590)
chr5 (299-349)||(14520804-14520854)
chr5 (299-440)||(16543994-16544134)
chr5 (299-440)||(2785822-2785963)
chr5 (299-440)||(33768631-33768772)
chr5 (299-440)||(33791763-33791904)
chr5 (308-343)||(43625605-43625640)
chr5 (395-445)||(42426680-42426730)
chr5 (407-436)||(31180619-31180648)
chr5 (369-445)||(28751027-28751103)
[»] scaffold0188 (1 HSPs)
scaffold0188 (299-439)||(17431-17571)
[»] chr7 (35 HSPs)
chr7 (298-445)||(39730932-39731079)
chr7 (299-445)||(48408398-48408544)
chr7 (298-445)||(21646497-21646644)
chr7 (298-445)||(43504575-43504722)
chr7 (299-440)||(18409258-18409399)
chr7 (299-440)||(18414134-18414275)
chr7 (296-440)||(24789423-24789567)
chr7 (299-445)||(25767400-25767540)
chr7 (308-440)||(21640283-21640415)
chr7 (308-440)||(2058465-2058596)
chr7 (297-445)||(2479814-2479962)
chr7 (308-439)||(20357036-20357167)
chr7 (299-445)||(47264121-47264267)
chr7 (291-444)||(4873577-4873729)
chr7 (308-440)||(12406717-12406849)
chr7 (343-440)||(1532947-1533044)
chr7 (294-415)||(44847614-44847735)
chr7 (306-440)||(21811745-21811879)
chr7 (299-445)||(21983721-21983867)
chr7 (299-373)||(1532884-1532958)
chr7 (311-440)||(24023830-24023959)
chr7 (299-440)||(20343500-20343640)
chr7 (299-440)||(6592781-6592921)
chr7 (299-445)||(21989386-21989531)
chr7 (308-440)||(31109078-31109211)
chr7 (299-440)||(32060748-32060888)
chr7 (299-440)||(6594997-6595137)
chr7 (308-402)||(12397390-12397484)
chr7 (299-440)||(18392640-18392780)
chr7 (299-376)||(1562511-1562587)
chr7 (357-445)||(2361603-2361691)
chr7 (362-445)||(4178413-4178497)
chr7 (336-445)||(23554653-23554762)
chr7 (308-349)||(79963-80004)
chr7 (408-440)||(24260929-24260961)
[»] chr1 (33 HSPs)
chr1 (298-445)||(19365767-19365914)
chr1 (299-445)||(19360912-19361058)
chr1 (299-445)||(51764990-51765136)
chr1 (299-418)||(24202251-24202370)
chr1 (299-440)||(20622680-20622821)
chr1 (299-445)||(9986785-9986931)
chr1 (299-440)||(40281958-40282099)
chr1 (299-439)||(13604095-13604235)
chr1 (307-439)||(41391047-41391178)
chr1 (299-440)||(21053540-21053680)
chr1 (308-440)||(39445942-39446074)
chr1 (308-445)||(26644382-26644519)
chr1 (308-440)||(25439407-25439539)
chr1 (308-440)||(44023385-44023517)
chr1 (308-440)||(1054522-1054654)
chr1 (299-440)||(9036003-9036143)
chr1 (308-440)||(25444600-25444732)
chr1 (362-440)||(24793709-24793787)
chr1 (362-440)||(41398701-41398778)
chr1 (299-440)||(44203218-44203358)
chr1 (364-445)||(31658880-31658961)
chr1 (382-440)||(24786907-24786965)
chr1 (308-349)||(24793674-24793715)
chr1 (362-445)||(20762310-20762394)
chr1 (306-349)||(21536119-21536162)
chr1 (299-349)||(3282281-3282331)
chr1 (307-349)||(41398772-41398814)
chr1 (308-349)||(13598975-13599016)
chr1 (298-349)||(37070342-37070393)
chr1 (395-445)||(28220672-28220722)
chr1 (395-445)||(28223867-28223917)
chr1 (395-431)||(3156540-3156576)
chr1 (316-352)||(16124197-16124233)
[»] scaffold0491 (2 HSPs)
scaffold0491 (299-445)||(9163-9308)
scaffold0491 (299-445)||(11608-11753)
[»] chr2 (23 HSPs)
chr2 (299-445)||(25410120-25410266)
chr2 (299-440)||(3492236-3492377)
chr2 (299-445)||(30832921-30833067)
chr2 (299-445)||(32289148-32289294)
chr2 (299-445)||(40739311-40739457)
chr2 (299-445)||(4484777-4484923)
chr2 (299-445)||(6266274-6266420)
chr2 (308-440)||(9295870-9296002)
chr2 (308-440)||(14291985-14292117)
chr2 (308-445)||(11098395-11098532)
chr2 (308-440)||(39811485-39811617)
chr2 (299-440)||(12647827-12647967)
chr2 (308-376)||(44310479-44310547)
chr2 (362-445)||(28258713-28258796)
chr2 (308-391)||(32247262-32247344)
chr2 (308-445)||(33528106-33528242)
chr2 (308-349)||(8389632-8389673)
chr2 (308-349)||(20522796-20522837)
chr2 (308-349)||(10706734-10706775)
chr2 (299-348)||(19344961-19345010)
chr2 (308-349)||(21630519-21630560)
chr2 (308-349)||(36757426-36757467)
chr2 (308-349)||(39483451-39483492)
[»] chr4 (40 HSPs)
chr4 (296-445)||(28467974-28468123)
chr4 (299-445)||(13992733-13992879)
chr4 (299-445)||(31495756-31495902)
chr4 (299-418)||(31985127-31985246)
chr4 (308-440)||(24742437-24742569)
chr4 (308-440)||(9223907-9224039)
chr4 (308-440)||(9228694-9228826)
chr4 (308-440)||(5733106-5733239)
chr4 (308-440)||(51520910-51521042)
chr4 (308-440)||(56141519-56141652)
chr4 (308-440)||(18856169-18856301)
chr4 (308-440)||(45347325-45347457)
chr4 (308-376)||(3814529-3814597)
chr4 (299-445)||(5148156-5148302)
chr4 (307-440)||(7122274-7122407)
chr4 (307-440)||(7124496-7124629)
chr4 (299-440)||(8392982-8393122)
chr4 (299-443)||(8395191-8395334)
chr4 (339-440)||(18712294-18712395)
chr4 (308-375)||(18860446-18860513)
chr4 (362-440)||(29761118-29761196)
chr4 (308-445)||(6742897-6743034)
chr4 (364-445)||(46570189-46570270)
chr4 (299-440)||(5135649-5135790)
chr4 (299-440)||(5137875-5138016)
chr4 (299-349)||(5143817-5143867)
chr4 (311-349)||(29761190-29761228)
chr4 (308-349)||(3778123-3778164)
chr4 (308-349)||(5268700-5268741)
chr4 (308-349)||(8689045-8689086)
chr4 (364-445)||(12745862-12745942)
chr4 (308-349)||(16628354-16628395)
chr4 (308-349)||(38151919-38151960)
chr4 (363-440)||(45356861-45356938)
chr4 (362-403)||(5143782-5143823)
chr4 (308-349)||(10047940-10047981)
chr4 (308-349)||(16622775-16622816)
chr4 (364-445)||(26176069-26176150)
chr4 (392-445)||(54882492-54882545)
chr4 (362-445)||(5370521-5370605)
[»] chr6 (39 HSPs)
chr6 (298-445)||(22709499-22709646)
chr6 (299-440)||(2171963-2172104)
chr6 (299-445)||(5674229-5674375)
chr6 (299-445)||(3073197-3073343)
chr6 (299-418)||(6097867-6097986)
chr6 (299-440)||(411685-411826)
chr6 (308-440)||(30125026-30125158)
chr6 (299-418)||(26253589-26253708)
chr6 (308-445)||(11857422-11857559)
chr6 (308-440)||(14741934-14742066)
chr6 (308-440)||(22010197-22010329)
chr6 (299-445)||(23896811-23896957)
chr6 (299-440)||(27647467-27647608)
chr6 (299-440)||(16578961-16579101)
chr6 (299-440)||(16616279-16616419)
chr6 (297-440)||(25420795-25420937)
chr6 (299-445)||(5756951-5757097)
chr6 (299-440)||(16554454-16554594)
chr6 (299-440)||(16631010-16631150)
chr6 (362-440)||(5266532-5266610)
chr6 (308-440)||(6438943-6439075)
chr6 (307-440)||(34166673-34166807)
chr6 (299-440)||(6136407-6136547)
chr6 (307-440)||(13150856-13150990)
chr6 (308-349)||(5266604-5266645)
chr6 (308-349)||(14737093-14737134)
chr6 (362-440)||(28155133-28155211)
chr6 (299-440)||(33342547-33342688)
chr6 (362-440)||(14737128-14737206)
chr6 (308-349)||(28155098-28155139)
chr6 (362-445)||(3809369-3809452)
chr6 (299-440)||(16839190-16839331)
chr6 (299-440)||(33329932-33330073)
chr6 (307-440)||(34164451-34164585)
chr6 (308-374)||(5343990-5344056)
chr6 (308-349)||(5016977-5017018)
chr6 (308-349)||(31085954-31085995)
chr6 (408-440)||(5343924-5343956)
chr6 (299-347)||(33335429-33335477)
[»] chr3 (63 HSPs)
chr3 (298-445)||(33386136-33386283)
chr3 (299-445)||(26928080-26928226)
chr3 (299-445)||(23198384-23198530)
chr3 (299-445)||(23200583-23200729)
chr3 (299-440)||(1306463-1306604)
chr3 (298-445)||(27453435-27453582)
chr3 (299-445)||(800685-800831)
chr3 (299-445)||(37726153-37726299)
chr3 (299-418)||(7782593-7782712)
chr3 (308-440)||(40372264-40372396)
chr3 (308-440)||(8477862-8477994)
chr3 (308-440)||(22172670-22172802)
chr3 (299-415)||(37408036-37408152)
chr3 (308-440)||(18656888-18657021)
chr3 (308-440)||(7167742-7167874)
chr3 (308-444)||(28503327-28503463)
chr3 (308-440)||(28501160-28501292)
chr3 (296-440)||(54634707-54634850)
chr3 (362-445)||(32143801-32143884)
chr3 (299-440)||(6716085-6716225)
chr3 (362-445)||(27986001-27986084)
chr3 (311-440)||(27352092-27352221)
chr3 (299-440)||(3617034-3617174)
chr3 (356-445)||(2671121-2671210)
chr3 (362-415)||(27974477-27974530)
chr3 (298-440)||(4601187-4601329)
chr3 (299-440)||(4598966-4599107)
chr3 (307-440)||(10055812-10055946)
chr3 (307-440)||(10058034-10058168)
chr3 (307-440)||(10060256-10060390)
chr3 (307-440)||(10062478-10062612)
chr3 (307-440)||(10064700-10064834)
chr3 (307-440)||(10066922-10067056)
chr3 (299-349)||(32143878-32143928)
chr3 (306-440)||(2672425-2672559)
chr3 (298-349)||(27974432-27974483)
chr3 (362-440)||(6718331-6718409)
chr3 (308-445)||(21711680-21711817)
chr3 (299-440)||(25637013-25637153)
chr3 (308-349)||(8738550-8738591)
chr3 (308-349)||(9090788-9090829)
chr3 (306-374)||(2676581-2676649)
chr3 (298-440)||(10208777-10208919)
chr3 (382-440)||(8738605-8738663)
chr3 (382-440)||(9090843-9090901)
chr3 (362-440)||(45282628-45282706)
chr3 (308-349)||(1730917-1730958)
chr3 (299-431)||(10210978-10211109)
chr3 (308-349)||(30709267-30709308)
chr3 (308-349)||(36029667-36029708)
chr3 (362-445)||(5258590-5258674)
chr3 (308-414)||(24694656-24694764)
chr3 (299-349)||(6718288-6718337)
chr3 (299-349)||(39032017-39032067)
chr3 (295-349)||(40845229-40845283)
chr3 (299-349)||(45282585-45282634)
chr3 (364-445)||(49200114-49200196)
chr3 (308-349)||(16264904-16264945)
chr3 (312-349)||(27027281-27027318)
chr3 (308-349)||(40592253-40592294)
chr3 (312-349)||(40734087-40734124)
chr3 (408-440)||(32475931-32475963)
chr3 (408-440)||(32480789-32480821)
[»] chr8 (35 HSPs)
chr8 (299-445)||(26288371-26288517)
chr8 (299-445)||(26301628-26301774)
chr8 (299-445)||(26313622-26313768)
chr8 (297-445)||(2627316-2627464)
chr8 (299-445)||(1261414-1261560)
chr8 (299-418)||(31042908-31043027)
chr8 (308-440)||(33037295-33037427)
chr8 (308-440)||(18852635-18852767)
chr8 (308-445)||(4759542-4759679)
chr8 (308-440)||(10683747-10683879)
chr8 (308-440)||(18870029-18870161)
chr8 (308-440)||(30656142-30656274)
chr8 (308-440)||(36979874-36980006)
chr8 (299-445)||(7412806-7412952)
chr8 (308-440)||(6311795-6311927)
chr8 (299-440)||(3439088-3439227)
chr8 (308-440)||(25327672-25327804)
chr8 (312-440)||(7289439-7289568)
chr8 (308-440)||(39784333-39784465)
chr8 (362-440)||(10688661-10688739)
chr8 (298-440)||(15290142-15290284)
chr8 (298-440)||(15470511-15470653)
chr8 (299-440)||(42575768-42575909)
chr8 (308-349)||(10688626-10688667)
chr8 (336-445)||(1746664-1746773)
chr8 (299-349)||(25689561-25689610)
chr8 (308-349)||(5701960-5702001)
chr8 (362-445)||(19945785-19945869)
chr8 (362-445)||(31217895-31217979)
chr8 (362-445)||(43036062-43036146)
chr8 (307-349)||(4456583-4456625)
chr8 (362-440)||(25689604-25689681)
chr8 (364-445)||(42435654-42435736)
chr8 (299-348)||(35745930-35745979)
chr8 (362-445)||(34256950-34257033)
[»] scaffold0140 (1 HSPs)
scaffold0140 (298-418)||(7910-8030)
[»] scaffold0286 (1 HSPs)
scaffold0286 (299-440)||(21939-22080)
[»] scaffold1519 (1 HSPs)
scaffold1519 (336-445)||(519-628)
[»] scaffold0006 (3 HSPs)
scaffold0006 (299-439)||(132752-132892)
scaffold0006 (308-349)||(6260-6301)
scaffold0006 (308-345)||(3072-3109)
[»] scaffold0510 (1 HSPs)
scaffold0510 (299-445)||(1083-1229)
[»] scaffold0087 (3 HSPs)
scaffold0087 (306-439)||(43441-43574)
scaffold0087 (370-445)||(36376-36451)
scaffold0087 (299-352)||(36324-36377)
[»] scaffold0355 (1 HSPs)
scaffold0355 (308-440)||(3345-3477)
[»] scaffold0135 (1 HSPs)
scaffold0135 (308-440)||(34562-34694)
[»] scaffold0565 (1 HSPs)
scaffold0565 (297-440)||(3045-3187)
[»] scaffold0464 (1 HSPs)
scaffold0464 (308-440)||(805-937)
[»] scaffold1455 (1 HSPs)
scaffold1455 (308-375)||(1717-1784)
[»] scaffold0674 (1 HSPs)
scaffold0674 (299-440)||(4170-4310)
[»] scaffold0098 (2 HSPs)
scaffold0098 (299-359)||(45744-45804)
scaffold0098 (362-445)||(45677-45760)
[»] scaffold0665 (2 HSPs)
scaffold0665 (308-349)||(8224-8265)
scaffold0665 (362-440)||(8152-8230)
[»] scaffold0137 (1 HSPs)
scaffold0137 (299-415)||(5859-5974)


Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 28 - 299
Target Start/End: Original strand, 43362611 - 43362883
Alignment:
Q  28 catttttaacttc-ttagtcttgattccttttatatttatcaaacttaatcttgattccaaataggggatcaggagaagaatnnnnnnntacaagtcagt 126  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       || ||||||||    
T  43362611 catttttaacttccttagtcttgattccttttatatttatcaaacttaatcttgattacaaataggggatcaggagaagaataaaaaaatagaagtcagt 43362710  T
Q  127 tgccactttttgatttatgatacagcatgtaacgctttgtacagcagtgtcaactnnnnnnntgagcaatgagagaagcatagaaaaagtggaaacaata 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  43362711 tgccactttttgatttatgatacagcatgtaacgctttgtacagcagtgtcaactaaaaaaatgagcaatgagagaagcatagaaaaagtggaaacaata 43362810  T
Q  227 tctggtgctaaggattgcactttcattgtttgggtttggggccaagaaaactaatgttcctaacttcaaaagt 299  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43362811 tctggtgctaaggattacactttcattgtttgggtttggggcctagaaaactaatgttcctaacttcaaaagt 43362883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 16407641 - 16407787
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  16407641 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 16407740  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||| | ||||||||||| ||||    
T  16407741 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattt 16407787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 26177466 - 26177612
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 26177565  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| |||| |||||||||||||||| ||||    
T  26177566 cagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgattt 26177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 9789809 - 9789663
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9789710  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| |||  |||||||||||||||| ||||    
T  9789709 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 9789663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 298 - 445
Target Start/End: Original strand, 26170356 - 26170503
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    |||||||| ||||||||||||||| ||||  |||||||||| |||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||    
T  26170356 gtgttgagttttggcttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggttt 26170455  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||    
T  26170456 gcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacataattt 26170503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 16409077 - 16409223
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtttg 16409176  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    || |||||||||| |||||| ||||||| | ||||||||||| ||||    
T  16409177 caaggtgccaaattgtgacacgatcttgaggaatcgtgacacgattt 16409223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 18442233 - 18442087
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 18442134  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| |||  |||||||||||||||| ||||    
T  18442133 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 18442087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 24136484 - 24136338
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| |||||| ||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||||| |||| ||||||||||||||| |||||    
T  24136484 tgttgatatttggtttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagtttg 24136385  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  24136384 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattt 24136338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 418
Target Start/End: Complemental strand, 15465125 - 15465006
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 15465026  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    ||||||||||||||||||||    
T  15465025 cagggtgccaaatcgtgaca 15465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 298 - 440
Target Start/End: Original strand, 29719964 - 29720106
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| || |    
T  29719964 gtgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtct 29720063  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||||||||||| |||  ||||||||||||||||    
T  29720064 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacac 29720106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 418
Target Start/End: Original strand, 36931843 - 36931962
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||||||||    
T  36931843 tgttgagatttcgcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagctggtttg 36931942  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    ||||||||||||||||||||    
T  36931943 cagggtgccaaatcgtgaca 36931962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 29722152 - 29722293
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||| ||| ||||||| || ||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagctagtctg 29722251  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    || ||||||||||||||||| |||  ||||||||||||||||    
T  29722252 catggtgccaaatcgtgacacgattgtgggaaatcgtgacac 29722293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 298 - 445
Target Start/End: Original strand, 9352806 - 9352953
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||||  | | | |||||||||||||||||||||| |||||||||||||||||    
T  9352806 gtgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggttt 9352905  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||| ||||||||| || |||  || ||||||||||||| ||||    
T  9352906 gcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattt 9352953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 299 - 415
Target Start/End: Complemental strand, 29752390 - 29752274
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| | |||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggttg 29752291  T
Q  399 cagggtgccaaatcgtg 415  Q
    |||||||||||||||||    
T  29752290 cagggtgccaaatcgtg 29752274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 30631940 - 30631808
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||||  |||||||||  |||    
T  30631940 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcaggacgcc 30631841  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| ||| |||||||||||||||||    
T  30631840 aaatcgtgacacgattttgggaaatcgtgacac 30631808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 27450401 - 27450269
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  |||    
T  27450401 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgcc 27450302  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  27450301 aaatcgtggcacgatcttgggaaatcgtgacac 27450269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 1456646 - 1456778
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||| ||||  |||    
T  1456646 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttacaggacgcc 1456745  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  1456746 aaatcgtggcacgatcttgggaaatcgtgacac 1456778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 27445558 - 27445426
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    ||||||||||||||||||||  |||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  |||    
T  27445558 ttggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgcc 27445459  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  27445458 aaatcgtggcacgatcttgggaaatcgtgacac 27445426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 299 - 418
Target Start/End: Complemental strand, 29751724 - 29751605
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||| |  |||||||||||  |||||||||| ||| ||||||||||| | |||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggttg 29751625  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    ||||||||||||||||||||    
T  29751624 cagggtgccaaatcgtgaca 29751605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 15045271 - 15045140
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||| ||  ||||||||||||||||||||| || | ||||| |||||||||||| |||| ||||||||||||  |||||||||  |||    
T  15045271 ttggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-tttgagatgccgtgagccagtttgcaggacgcc 15045173  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  15045172 aaatcgtggcacgatcttgggaaatcgtgacac 15045140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 29402558 - 29402690
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||| ||||||||   |  ||| |||||| |||||||||  |||    
T  29402558 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagtttgcaggacgcc 29402657  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  29402658 aaatcgtggcacgatcttgggaaatcgtgacac 29402690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 43599310 - 43599177
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattt-tgtgatgccgtgagctggtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||| ||||||||||||||    |  |||||||||| |||||||||  ||    
T  43599310 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgc 43599211  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||||||||||||||||    
T  43599210 caaatcgtggcacgatcttgggaaatcgtgacac 43599177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 43604802 - 43604669
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattt-tgtgatgccgtgagctggtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||| ||||||||||||||    |  |||||||||| |||||||||  ||    
T  43604802 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgc 43604703  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||||||||||||||||    
T  43604702 caaatcgtggcacgatcttgggaaatcgtgacac 43604669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 43610294 - 43610161
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattt-tgtgatgccgtgagctggtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||| ||||||||||||||    |  |||||||||| |||||||||  ||    
T  43610294 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgc 43610195  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||||||||||||||||    
T  43610194 caaatcgtggcacgatcttgggaaatcgtgacac 43610161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 22536852 - 22536712
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | | ||||||||||||||||||| | | ||||||||||| | |||    
T  22536852 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 22536754  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| |||||||| ||  ||  ||||||||||||||||    
T  22536753 cagggtgcaaaatcgtggcacaattgtgggaaatcgtgacac 22536712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 28807084 - 28807216
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgc 406  Q
    |||||||||||||| ||||| |||||||||||| |||||||  || | ||||  ||||||||||||| | | ||||||||||||   |||||||||||||    
T  28807084 ttggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatct-gagatgccgtgagccaagtttgcagggtgc 28807182  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  28807183 aaaatcgtggcacgatcttgggaaatcgtgacac 28807216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 10592844 - 10592983
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||  | | ||||||||| | | |||    
T  10592844 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccg-ggtgccgtgagataggttg 10592941  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| |||||||| || ||| | || ||||||||||||    
T  10592942 cagggtgcaaaatcgtggcacgatttgggaaaatcgtgacac 10592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 38219949 - 38219884
Alignment:
Q  380 gatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  38219949 gatgccgtgagctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattt 38219884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 40379678 - 40379818
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||  || | ||||| |||||||||||| || | | ||||||||||| || ||    
T  40379678 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 40379775  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||| ||| | || ||||||||||||    
T  40379776 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacac 40379818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 350
Target Start/End: Complemental strand, 35388246 - 35388195
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgat 350  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtgat 35388195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 16546216 - 16546356
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||  |||||||||| |||||||||  || | ||||| |||||||||||| || | | ||||||||||| || ||    
T  16546216 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 16546313  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||| ||| | || ||||||||||||    
T  16546314 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacac 16546356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 40381889 - 40382029
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| | |||||||| |||||||||  || | ||||| |||||||||||| || | | ||||||||||| || ||    
T  40381889 tgttgagatt-gtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 40381986  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||| ||| | || ||||||||||||    
T  40381987 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacac 40382029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 37556131 - 37556265
Alignment:
Q  306 atttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggt 404  Q
    |||||||||||||||||||||| |||||||||||| |||||||| || | || |  |||||||||||| | || ||||||||||| |  ||||  | ||     
T  37556131 atttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacga-tctgagatgccgtgagccaagttttgatgga 37556229  T
Q  405 gccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    | ||||||||| || ||||||||||||| |||||||    
T  37556230 ggcaaatcgtggcacgatcttgggaaattgtgacac 37556265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 37560953 - 37561087
Alignment:
Q  306 atttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggt 404  Q
    |||||||||||||||||||||| |||||||||||| |||||||| || | ||    |||||||||||| | || ||||||||||| |  ||||  | ||     
T  37560953 atttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacga-tctgagatgccgtgagccaagttttgatgga 37561051  T
Q  405 gccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    | ||||||||| || |||||||||||||||||||||    
T  37561052 ggcaaatcgtggcacgatcttgggaaatcgtgacac 37561087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 25077713 - 25077846
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||| |||||||||| |||||||||| || | ||||| |||||||| |||||  | | ||||||||||| || ||| ||||      
T  25077713 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattg-gaggtgccgtgagctagggttgtaggggt 25077811  T
Q  406 ccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     ||||||||| || |||  ||||||||||||||||    
T  25077812 gcaaatcgtgtcacgattgtgggaaatcgtgacac 25077846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 25135682 - 25135815
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||| |||||||||| |||||||||| || | ||||| |||||||| |||||  | | ||||||||||| || ||| ||||      
T  25135682 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattg-gaggtgccgtgagctagggttgtaggggt 25135780  T
Q  406 ccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     ||||||||| || |||  ||||||||||||||||    
T  25135781 gcaaatcgtgtcacgattgtgggaaatcgtgacac 25135815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 440
Target Start/End: Complemental strand, 31180787 - 31180709
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||   | || |||||||| |||||||||  ||||||||||| || |||||||||||||||||||||    
T  31180787 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacac 31180709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 31180822 - 31180781
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  31180822 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 31180781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 43592789 - 43592732
Alignment:
Q  383 gccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||| |||||||||  ||||||||||| || |||||||||||||||||||||    
T  43592789 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacac 43592732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 43592846 - 43592805
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  43592846 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 43592805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 35388199 - 35388159
Alignment:
Q  378 gtgatgccgtgagctggtttgcagggtgccaaatcgtgaca 418  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  35388199 gtgatgccgtgagctggtttgcagggtgccaaattgtgaca 35388159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 445
Target Start/End: Original strand, 11916452 - 11916590
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggtg 405  Q
    ||||||||||||||||||||  | ||||||||||||||||||| |||| ||   || |||| |||||||||   | || |||||  ||||||||||||||    
T  11916452 tttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacacaatttcatcaacgtgtcacgatttt-ccaggcagtgagtgtggtttgcagggtg 11916550  T
Q  406 ccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |  ||||||| || ||| |||||||| |||||||| ||||    
T  11916551 ctcaatcgtgtcacgattttgggaaaacgtgacacgattt 11916590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 14520854 - 14520804
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||| | |||||||||||||||||||  |||||||||||||||||||||    
T  14520854 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtga 14520804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 16543994 - 16544134
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||  |||||||||| |||||||||  || | ||||| ||||||||||||||  | | ||| ||||||| || ||    
T  16543994 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgctgtgagctagggtt 16544091  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||| ||| | || ||||||||||||    
T  16544092 acagggtgcaaattcgtgacacgatttgggaaaatcgtgacac 16544134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 2785963 - 2785822
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 396  Q
    |||||| | |||||||||||||||||||  |||||||||||| ||||||| |    ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  2785963 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtg-tcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 2785866  T
Q  397 tgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||| ||  || |||||||| || |||||||||||||||||||||    
T  2785865 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacac 2785822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 33768772 - 33768631
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 396  Q
    |||||| | |||||||||||||||||||  |||||||||||| ||||||| |    ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  33768772 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtg-tcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 33768675  T
Q  397 tgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||| ||  || |||||||| || |||||||||||||||||||||    
T  33768674 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacac 33768631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 33791904 - 33791763
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 396  Q
    |||||| | |||||||||||||||||||  |||||||||||| ||||||| |    ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  33791904 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtg-tcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 33791807  T
Q  397 tgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||| ||  || |||||||| || |||||||||||||||||||||    
T  33791806 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacac 33791763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 343
Target Start/End: Complemental strand, 43625640 - 43625605
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaa 343  Q
    |||||||||||||||||||| |||||||||||||||    
T  43625640 ttggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 42426730 - 42426680
Alignment:
Q  395 tttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||| | |||||||||| ||| |||||||| |||||||||||||    
T  42426730 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacaattt 42426680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 436
Target Start/End: Complemental strand, 31180648 - 31180619
Alignment:
Q  407 caaatcgtgacatgatcttgggaaatcgtg 436  Q
    ||||||||||||||||||||||||||||||    
T  31180648 caaatcgtgacatgatcttgggaaatcgtg 31180619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 445
Target Start/End: Complemental strand, 28751103 - 28751027
Alignment:
Q  369 cacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||| || ||| || ||| || |||||||||||   |||||||||| ||| |||||||| |||||||||||||    
T  28751103 cacgatttcgtaatgtcgagagttgttttgcagggtgttcaatcgtgacacgattttgggaaaacgtgacacaattt 28751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 299 - 439
Target Start/End: Original strand, 17431 - 17571
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  17431 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 17530  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgaca 439  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  17531 cagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 17571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 3e-61; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 298 - 445
Target Start/End: Original strand, 39730932 - 39731079
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  39730932 gtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 39731031  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||| ||||||| | ||||||||||| ||||    
T  39731032 gcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattt 39731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 48408398 - 48408544
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  48408398 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 48408497  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  48408498 cagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgattt 48408544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 298 - 445
Target Start/End: Complemental strand, 21646644 - 21646497
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  21646644 gtgttgacatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 21646545  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  21646544 gcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattt 21646497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 298 - 445
Target Start/End: Complemental strand, 43504722 - 43504575
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  43504722 gtgttgagatttagcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 43504623  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  43504622 gcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacacgattt 43504575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 18409399 - 18409258
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| | || ||||||||||||||||||||||||||| |||||||||||||||||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtttg 18409300  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||| ||||| ||||||| |||||||||||||    
T  18409299 cagggtgccaaatcatgacacgatcttgagaaatcgtgacac 18409258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 18414275 - 18414134
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||| |||||||||||| |||||||||||||||||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggtttg 18414176  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||| |||||||||||||| |||||||||||||||| ||||    
T  18414175 cagggcgccaaatcgtgacacgatcttgggaaatcgtaacac 18414134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 296 - 440
Target Start/End: Original strand, 24789423 - 24789567
Alignment:
Q  296 aagtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggt 395  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| ||    
T  24789423 aagtgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagt 24789522  T
Q  396 ttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  24789523 ttgcagggtgccaaatcgtggcacgatcttgggaaatcgtgacac 24789567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 25767540 - 25767400
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| |||||||||||||||||||||| ||||      ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  25767540 tgttgatatttggcttcaaatttgtggtctggaa------agaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 25767447  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  25767446 cagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattt 25767400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 21640415 - 21640283
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  |||    
T  21640415 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgcc 21640316  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||||||||||||||    
T  21640315 aaatcgtgacacgatcttgggaaatcgtgacac 21640283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 2058596 - 2058465
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||| |||| | ||||||||||| |||||||||  |||    
T  2058596 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacga-tttgaggtgccgtgagctagtttgcaggacgcc 2058498  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  2058497 aaatcgtggcacgatcttgggaaatcgtgacac 2058465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 297 - 445
Target Start/End: Complemental strand, 2479962 - 2479814
Alignment:
Q  297 agtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtt 396  Q
    |||||||| |||||||||||||||||||||  | |||||||||||||| |||| || | |||||||||||||||||||||| | ||||||||||||||||    
T  2479962 agtgttgaaatttggcttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtt 2479863  T
Q  397 tgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||| ||||||||| || ||| ||| |||||||| |||| ||||    
T  2479862 tgcagggtgtcaaatcgtgtcacgattttgtgaaatcgttacacgattt 2479814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 439
Target Start/End: Original strand, 20357036 - 20357167
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   | ||||||||||| |||||||||  |||    
T  20357036 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgcc 20357135  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgaca 439  Q
    |||||||| || ||||||||||||||||||||    
T  20357136 aaatcgtggcacgatcttgggaaatcgtgaca 20357167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 47264267 - 47264121
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| |||||||||||||||||||||  ||||||| ||||||||||||| || | |||||||||||||||||||||||| ||| ||||||||||||||    
T  47264267 tgttgaaatttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttg 47264168  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
     |||||| ||||||||| ||  ||  || ||||||||||||| ||||    
T  47264167 tagggtgtcaaatcgtggcacaattgtgtgaaatcgtgacacgattt 47264121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 291 - 444
Target Start/End: Complemental strand, 4873729 - 4873577
Alignment:
Q  291 ttcaaaagtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag 390  Q
    ||||| |||||||| ||| |||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  ||||| ||    
T  4873729 ttcaatagtgttgatatt-ggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaag 4873631  T
Q  391 ctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaatt 444  Q
     | |||||||||  ||||||||||| || |||||||||||||||||||||||||    
T  4873630 atagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacaatt 4873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 12406849 - 12406717
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| ||||||| |  |||    
T  12406849 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaagacgcc 12406750  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  12406749 aaatcgtggcacgatcttgggaaatcgtgacac 12406717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 343 - 440
Target Start/End: Original strand, 1532947 - 1533044
Alignment:
Q  343 atcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||| || ||||||||||||||||| ||||||| | |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 1533044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 294 - 415
Target Start/End: Original strand, 44847614 - 44847735
Alignment:
Q  294 aaaagtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg 393  Q
    |||| |||||| |||||||||||||||||||||    ||||||||||||||||||| || | |||||||||||||||||||||||| ||| |||||||||    
T  44847614 aaaattgttgaaatttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctg 44847713  T
Q  394 gtttgcagggtgccaaatcgtg 415  Q
    ||||||||| || || ||||||    
T  44847714 gtttgcaggatgtcagatcgtg 44847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 21811745 - 21811879
Alignment:
Q  306 atttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggt 404  Q
    |||||||||||||||||||||| |||||||||||| |||||||  || | |||| ||||||||||||| | || ||||||||||||   |||||||||||    
T  21811745 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacga-tctgagatgccgtgagcaatgtttgcagggt 21811843  T
Q  405 gccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    || |||||||| || |||||||||||||||||||||    
T  21811844 gcaaaatcgtggcacgatcttgggaaatcgtgacac 21811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 21983867 - 21983721
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| | |||||||||||||||||||  ||||||||||||||||||||| || | ||   ||||||||||||||||||  ||| ||||||||||||||    
T  21983867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttg 21983768  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||| | ||||| | |||||| ||| |||| |||||||| ||||    
T  21983767 cagggtgaccaatcgcggcatgattttgtgaaaacgtgacacgattt 21983721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 1532884 - 1532958
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacga 373  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  1532884 tgttgatatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 440
Target Start/End: Original strand, 24023830 - 24023959
Alignment:
Q  311 gcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaa 410  Q
    ||||||||||||||||| ||||||||||||||||||||| || | | |||||||||| ||||||||   |  || | ||||| |||||||||  ||||||    
T  24023830 gcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagtttgcaggacgccaaa 24023929  T
Q  411 tcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||| || |||||||||||||||||||||    
T  24023930 tcgtggcacgatcttgggaaatcgtgacac 24023959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 20343500 - 20343640
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| ||||||||||  | | | ||||||||||||||||||| | | ||||||||||| | |||    
T  20343500 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 20343598  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    | || ||| |||||||| || |||  ||||||||||||||||    
T  20343599 ccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacac 20343640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 6592921 - 6592781
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||    
T  6592921 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggtt 6592824  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| | || ||||||||||||    
T  6592823 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacac 6592781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 21989531 - 21989386
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| | |||||||||||||||||||  ||||||||||||||||||||| |  | ||   ||||||||||||||||||  ||| ||||||||||||||    
T  21989531 tgttgaaagttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttg 21989432  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||| | | ||||||| || ||| ||| |||| |||||||| ||||    
T  21989431 cagggcgaccaatcgtggcacgattttgtgaaa-cgtgacacgattt 21989386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 31109078 - 31109211
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgcc-gtgagct-ggtttgcagggtg 405  Q
    |||||||||||||||||||  ||||||||||||||||||||| || | |||||||||||| ||||||||   | |||| || ||||  |||||||||  |    
T  31109078 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaag-tgcctgtaagctaagtttgcaggacg 31109176  T
Q  406 ccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||| || |||||||||||||||||||||    
T  31109177 ccaaatcgtggcacgatcttgggaaatcgtgacac 31109211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 32060888 - 32060748
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||    
T  32060888 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 32060791  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| | || ||||||||||||    
T  32060790 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacac 32060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 6595137 - 6594997
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||| ||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||    
T  6595137 tgttgagatt-gtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggtt 6595040  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| | || ||||||||||||    
T  6595039 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacac 6594997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 402
Target Start/End: Complemental strand, 12397484 - 12397390
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagg 402  Q
    |||||||||||||||||||| |||||||||||||||||| || || | ||||| |||||||||||||||   |  |||||||||| |||||||||    
T  12397484 ttggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggccgtgagctagtttgcagg 12397390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 18392780 - 18392640
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||  |||||||||| |||||||||  || | ||||| |||||||||||| || | | ||||||||||| || ||    
T  18392780 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 18392683  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||| ||| | || ||||||||||||    
T  18392682 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacac 18392640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 376
Target Start/End: Complemental strand, 1562587 - 1562511
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattt 376  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| |||||||||||||||    
T  1562587 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 1562511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 2361691 - 2361603
Alignment:
Q  357 ttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||| ||||||||||||||||   ||| || |||||| |||| ||| ||||||||||||||| ||| ||||| || |||||||||||||    
T  2361691 ttggaatcgtgacacgattttacaatgtcgagagctgttttgtaggatgccaaatcgtgacacgattttggggaaacgtgacacaattt 2361603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 445
Target Start/End: Original strand, 4178413 - 4178497
Alignment:
Q  362 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||| | ||| || |||||||||| ||||| | | |||||||||| ||| ||||||||||||||||| ||||    
T  4178413 atcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgattt 4178497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 23554653 - 23554762
Alignment:
Q  336 cagagaaatcgtgatacaaatttggc-atcgtgacacgatttt-gtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatc 433  Q
    ||||||||||||||||| |||||||| | |||| ||||||||| || ||| || ||||| |||| ||||||| | |||||||||| ||| |||||||| |    
T  23554653 cagagaaatcgtgatac-aatttggcaagcgtgtcacgattttggtaatgtcgagagct-gttttcagggtgtccaatcgtgacacgattttgggaaaac 23554750  T
Q  434 gtgacacaattt 445  Q
    ||||||| ||||    
T  23554751 gtgacacgattt 23554762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 80004 - 79963
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  80004 ttggcttcaaatttgtgatttggaagaacagagaaatcgtga 79963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 440
Target Start/End: Original strand, 24260929 - 24260961
Alignment:
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||||||||||||||    
T  24260929 aaatcgtgacacgatcttgggaaatcgtgacac 24260961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 298 - 445
Target Start/End: Original strand, 19365767 - 19365914
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  19365767 gtgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 19365866  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  19365867 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattt 19365914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 19360912 - 19361058
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 19361011  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  19361012 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattt 19361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 51764990 - 51765136
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||||||||||||    
T  51764990 tgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 51765089  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||| | ||||||||||| ||||    
T  51765090 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattt 51765136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 299 - 418
Target Start/End: Original strand, 24202251 - 24202370
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 24202350  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    ||||||||||||||||||||    
T  24202351 cagggtgccaaatcgtgaca 24202370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 20622821 - 20622680
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| || ||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 20622722  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||||||| |||  ||||||||||||||||    
T  20622721 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacac 20622680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 9986785 - 9986931
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||| || |||||| |||||| ||||||||| ||| |||||||||||||| ||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagctggtctg 9986884  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||| |||||||||||||||| ||| ||||||||||||||||| ||||    
T  9986885 cagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgattt 9986931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 40281958 - 40282099
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| ||||||| || |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| | |||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggttg 40282057  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||||||| |||  ||| ||||||||||||    
T  40282058 cagggtgccaaatcgtgacacgattgtggtaaatcgtgacac 40282099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 299 - 439
Target Start/End: Original strand, 13604095 - 13604235
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||||| || | | ||| |||||| ||||||||||||||| ||||||||||||||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 13604194  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgaca 439  Q
    ||| ||| |||||||||||| ||| ||| | ||||||||||    
T  13604195 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgaca 13604235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 307 - 439
Target Start/End: Complemental strand, 41391178 - 41391047
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgc 406  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| |||| ||||||||||||  |||||||||  ||    
T  41391178 tttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-tttgagatgccgtgagccagtttgcaggacgc 41391080  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgaca 439  Q
    ||||||||| || ||||||||||||||||||||    
T  41391079 caaatcgtggcacgatcttgggaaatcgtgaca 41391047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 21053540 - 21053680
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||| ||| ||||||| |  ||    
T  21053540 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagctagaatg 21053638  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    || ||||||||||||||||| |||  ||||||||||||||||    
T  21053639 caaggtgccaaatcgtgacacgattgtgggaaatcgtgacac 21053680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 39446074 - 39445942
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| |||| ||||||||||| |  |||||||||  ||    
T  39446074 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-tttgagatgccgtgagccaagtttgcaggacgc 39445976  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||||||||| ||||||    
T  39445975 caaatcgtggcacgatcttgggaaatcatgacac 39445942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 445
Target Start/End: Original strand, 26644382 - 26644519
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    ||||||| |||||||||||  |||||||||||| ||||||||||| | |||| |||||| |||||||||||| ||| | |||||||||||||| |||| |    
T  26644382 ttggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattttgtaatgtcatgagctggtttgcacggtgtc 26644481  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||| || ||| ||| |||| |||||||| ||||    
T  26644482 aaatcgtggcacgattttgtgaaaacgtgacacgattt 26644519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 25439407 - 25439539
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggtgc 406  Q
    |||||||||||||||||||| |||||||||||| |||||||| || | || |  |||||||||||| |||| ||||||||||| |  ||||||||| |||    
T  25439407 ttggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacga-tttgagatgccgtgagccaagtttgcaggatgc 25439505  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  25439506 aaaatcgtggcacgatcttgggaaatcgtgacac 25439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 44023385 - 44023517
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || |||    
T  44023385 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 44023483  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  44023484 aaaatcgtggcacgatcttgggaaatcgtgacac 44023517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 1054522 - 1054654
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||  || | ||||| ||||||| ||||||  | | ||||||||||   |||||||||  ||    
T  1054522 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgattg-gaggtgccgtgagccaagtttgcaggacgc 1054620  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| || |||||||||||||||||||||    
T  1054621 caaatcgtggcacgatcttgggaaatcgtgacac 1054654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 9036003 - 9036143
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | | ||||||||||| | |||    
T  9036003 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 9036101  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || ||||| ||  || |||  ||||||||||||    
T  9036102 cagggtgcaaattcgtgtcactattttgttaaatcgtgacac 9036143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 25444600 - 25444732
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggtgc 406  Q
    |||||||||||||||||||| |||||||||||| |||||||| || | || |  |||||||||||| |||| ||||||||||| |  ||||| ||| |||    
T  25444600 ttggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacga-tttgagatgccgtgagccaagtttgtaggatgc 25444698  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  25444699 aaaatcgtggcacgatcttgggaaatcgtgacac 25444732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 24793709 - 24793787
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| || |||||||||||||||||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacac 24793787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 440
Target Start/End: Complemental strand, 41398778 - 41398701
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||||| | ||||||||||||  |||||||||  ||||||||||| || |||||||||||||||||||||    
T  41398778 atcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacac 41398701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 44203218 - 44203358
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| |||||||||||| || | | ||||||||||| || ||    
T  44203218 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 44203315  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| | || ||||||||||||    
T  44203316 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacac 44203358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 31658880 - 31658961
Alignment:
Q  364 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||| ||||||||||  ||| || |||||| ||||||||||||| |||||||||| ||| |||||||| |||||||||||||    
T  31658880 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacaattt 31658961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 440
Target Start/End: Original strand, 24786907 - 24786965
Alignment:
Q  382 tgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||  ||||||||||| || |||||||||||||||||||||    
T  24786907 tgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacac 24786965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 24793674 - 24793715
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  24793674 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 24793715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 445
Target Start/End: Original strand, 20762310 - 20762394
Alignment:
Q  362 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||| | ||| || |||||||||| ||||| | | |||||||||| ||| ||||||||||||||||| ||||    
T  20762310 atcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgattt 20762394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 21536119 - 21536162
Alignment:
Q  306 atttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  21536119 atttggcttcaaatttgtggtttggaagaacagagaaatcgtga 21536162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 3282331 - 3282281
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||||||    
T  3282331 tgttgaaatttggcttcaaatttgtggttaggaagaacagaaaaatcgtga 3282281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 41398814 - 41398772
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  41398814 tttggcttcaaatttgtggtctgaaagaacagagaaatcgtga 41398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 13599016 - 13598975
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  13599016 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 13598975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 37070393 - 37070342
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    ||||||| | |||| ||||||||||||||  |||||||||||||||||||||    
T  37070393 gtgttgaaaattggtttcaaatttgtggtttggaagaacagagaaatcgtga 37070342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 28220722 - 28220672
Alignment:
Q  395 tttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||| |||||||||| ||| |||||||| |||||||| ||||    
T  28220722 tttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattt 28220672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 28223917 - 28223867
Alignment:
Q  395 tttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||| |||||||||| ||| |||||||| |||||||| ||||    
T  28223917 tttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattt 28223867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 3156540 - 3156576
Alignment:
Q  395 tttgcagggtgccaaatcgtgacatgatcttgggaaa 431  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  3156540 tttgcagggtgccaaatcgtgacacgattttgggaaa 3156576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 16124197 - 16124233
Alignment:
Q  316 aaatttgtggtccggaagaacagagaaatcgtgatac 352  Q
    |||||||||||  ||||||||||||||||||||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatac 16124233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 9308 - 9163
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9209  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9208 cagggtgccaaatcgtgacatgat-ttgggaaatcgtgacacgattt 9163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 11753 - 11608
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||    
T  11753 tgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 11654  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  11653 cagggtgccaaatcgtgacacgat-ttgggaaatcgtgacacgattt 11608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 25410266 - 25410120
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  25410266 tgttgagttttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggtttg 25410167  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  25410166 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattt 25410120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 3492377 - 3492236
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  3492377 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 3492278  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  3492277 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 3492236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 30832921 - 30833067
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||| |||||||||||||||| |||||||||||||||||||||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 30833020  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  30833021 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattt 30833067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 32289148 - 32289294
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 32289247  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||| ||||| ||||||| | ||||||||||| ||||    
T  32289248 cagggtgccaaatcttgacacgatcttgaggaatcgtgacacgattt 32289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 40739457 - 40739311
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 40739358  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||| | ||| ||||||||||||    
T  40739357 cagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattt 40739311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 4484923 - 4484777
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||  |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||  |||||||||||||| |||||    
T  4484923 tgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagtttg 4484824  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||  | ||||||||||| ||||    
T  4484823 cagggtgccaaatcgtgacacgatcttaaggaatcgtgacacgattt 4484777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 6266274 - 6266420
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||  |||||||||| || |||||| ||||||||||| |||| |||||||||||||||||||||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggtttg 6266373  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| |||  |||||||||||||||| ||||    
T  6266374 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 6266420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 9295870 - 9296002
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   | ||||||||||| ||||||||| ||||    
T  9295870 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggatgcc 9295969  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  9295970 aaatcgtggcacgatcttgggaaatcgtgacac 9296002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 14292117 - 14291985
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||| | | | ||||||||||| |||||||||  |||    
T  14292117 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttgcaggacgcc 14292018  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  14292017 aaatcgtggcacgatcttgggaaatcgtgacac 14291985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 308 - 445
Target Start/End: Original strand, 11098395 - 11098532
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||| ||||||||||||   | ||||||||||| |||||||||  |||    
T  11098395 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttgcaggacgcc 11098494  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||| || ||||||||||||||||||||| ||||    
T  11098495 aaatcgtggcacgatcttgggaaatcgtgacacgattt 11098532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 39811485 - 39811617
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |   |||| |||  |||||||||  |||    
T  39811485 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgcaggacgcc 39811584  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  39811585 aaatcgtggcacgatcttgggaaatcgtgacac 39811617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 12647967 - 12647827
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||    
T  12647967 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggtt 12647870  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || |||  ||||||||||||||||    
T  12647869 gcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacac 12647827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 44310479 - 44310547
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattt 376  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  44310479 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 362 - 445
Target Start/End: Original strand, 28258713 - 28258796
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||  || ||| ||||||||||||| ||||    
T  28258713 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattt 28258796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 391
Target Start/End: Complemental strand, 32247344 - 32247262
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagc 391  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| |||| ||||||||||||    
T  32247344 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-tttgagatgccgtgagc 32247262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 445
Target Start/End: Original strand, 33528106 - 33528242
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgc 406  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||| ||   || |||  || |||||  | | || |||||| |||||||||||||||    
T  33528106 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaatttcatcaacgtatcatgattt--tcaggcagtgagcatggtttgcagggtgc 33528203  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
      ||||||| || ||| |||||||| |||||||| ||||    
T  33528204 tcaatcgtgtcacgattttgggaaaacgtgacacgattt 33528242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 8389632 - 8389673
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  8389632 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 8389673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 20522837 - 20522796
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  20522837 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 20522796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 10706734 - 10706775
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  10706734 ttggcttcaaatttgttgtttggaagaacagagaaatcgtga 10706775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 19345010 - 19344961
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtg 348  Q
    |||||| | |||||||||||||||||||  |||||||||||| |||||||    
T  19345010 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtg 19344961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 21630560 - 21630519
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  21630560 ttggcttcaaatttgtagtttggaagaacagagaaatcgtga 21630519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 36757426 - 36757467
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  36757426 ttggcttcaaatttgtggtttggaagaacagaaaaatcgtga 36757467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 39483492 - 39483451
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||| ||||    
T  39483492 ttggcttcaaatttgtggtttggaagaacagagaaattgtga 39483451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 5e-60; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 28467974 - 28468123
Alignment:
Q  296 aagtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggt 395  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||    
T  28467974 aagtgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggt 28468073  T
Q  396 ttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  28468074 ttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattt 28468123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 13992879 - 13992733
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||||| ||||||||||||||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggtttg 13992780  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  13992779 cagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattt 13992733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 31495902 - 31495756
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 31495803  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| |||  |||||||||||||||| ||||    
T  31495802 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 31495756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 299 - 418
Target Start/End: Original strand, 31985127 - 31985246
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| |    
T  31985127 tgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagttag 31985226  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    ||||||||||||||||||||    
T  31985227 cagggtgccaaatcgtgaca 31985246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 24742569 - 24742437
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  |||    
T  24742569 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgcc 24742470  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  24742469 aaatcgtggcacgatcttgggaaatcgtgacac 24742437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 9223907 - 9224039
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  |||    
T  9223907 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgcc 9224006  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  9224007 aaatcgtggcacgatcttgggaaatcgtgacac 9224039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 9228694 - 9228826
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  |||    
T  9228694 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctcgtttgcaggacgcc 9228793  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  9228794 aaatcgtggcacgatcttgggaaatcgtgacac 9228826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 5733239 - 5733106
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtg-agctggtttgcagggtgc 406  Q
    |||||||||||||||||||| | ||||||||||||||| ||| || | ||||||||||||||||||||| ||| ||||||| |||  |||||||||  ||    
T  5733239 ttggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgc 5733140  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||| |||||||||||||||||||||    
T  5733139 caaatcgtgacacgatcttgggaaatcgtgacac 5733106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 51521042 - 51520910
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  |||    
T  51521042 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgcc 51520943  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||| ||||||    
T  51520942 aaatcgtggcacgatcttgggaaatcatgacac 51520910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 56141519 - 56141652
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | |  | |||||||| |||||||||  |||    
T  56141519 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagtttgcaggacgcc 56141618  T
Q  408 -aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  56141619 aaaatcgtggcacgatcttgggaaatcgtgacac 56141652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 18856301 - 18856169
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || |||    
T  18856301 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 18856203  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  18856202 aaaatcgtggcaagatcttgggaaatcgtgacac 18856169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 45347325 - 45347457
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||| ||||||||||| || | ||||| |||||||||||| || | ||||||||||| |  |||||| || |||    
T  45347325 ttggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacga-ttagagatgccgtgagccaagtttgctggatgc 45347423  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  45347424 aaaatcgtggcacgatcttgggaaatcgtgacac 45347457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 3814597 - 3814529
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattt 376  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  3814597 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 3814529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 5148302 - 5148156
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| | |||||||||||||||||||  ||||||| ||||||||||||| || | |||  || |||||||||||||||  ||| |||||||| |||||    
T  5148302 tgttgaaaattggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagtttg 5148203  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||| | ||||||| || ||| ||| |||| | |||||| ||||    
T  5148202 cagggtgaccaatcgtggcacgattttgtgaaaacttgacacgattt 5148156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 7122274 - 7122407
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||      
T  7122274 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggt 7122372  T
Q  406 ccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     ||||||||| || |||  ||||||||||||||||    
T  7122373 gcaaatcgtggcacgattgtgggaaatcgtgacac 7122407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 7124496 - 7124629
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||      
T  7124496 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggt 7124594  T
Q  406 ccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     ||||||||| || |||  ||||||||||||||||    
T  7124595 gcaaatcgtggcacgattgtgggaaatcgtgacac 7124629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 8392982 - 8393122
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||    
T  8392982 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 8393079  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| | || ||||||||||||    
T  8393080 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacac 8393122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 443
Target Start/End: Original strand, 8395191 - 8395334
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||    
T  8395191 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 8395288  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaat 443  Q
    ||||||   ||||||||  || ||| | || |||||||||||||||    
T  8395289 gcaggggtgcaaatcgtagcacgatttgggaaaatcgtgacacaat 8395334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 440
Target Start/End: Original strand, 18712294 - 18712395
Alignment:
Q  339 agaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgac 438  Q
    ||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  ||||||||||| || |||||||||||||||||||    
T  18712294 agaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgac 18712393  T
Q  439 ac 440  Q
    ||    
T  18712394 ac 18712395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 375
Target Start/End: Complemental strand, 18860513 - 18860446
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgatt 375  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||| ||||||||||||||    
T  18860513 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 440
Target Start/End: Complemental strand, 29761196 - 29761118
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| || |||||||||||||||||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacac 29761118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 445
Target Start/End: Original strand, 6742897 - 6743034
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||| ||||  ||||||||||||||||||||| || | ||   || |||| ||||||||||  | | || |||||| ||| |||||||||    
T  6742897 ttggcttcaaatttatggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattttgcaacgtcgagagctgtttttcagggtgcc 6742996  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
     ||||||| || | | |||||||| |||||||| ||||    
T  6742997 taatcgtggcacgtttttgggaaaacgtgacacgattt 6743034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 46570270 - 46570189
Alignment:
Q  364 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||| ||||||||||  ||| || |||||| | ||||||||||| |||||||||| ||| |||||||| |||||||||||||    
T  46570270 cgtgtcacgattttgaaatgtcgagagctgttctgcagggtgcccaatcgtgacaagattttgggaaaacgtgacacaattt 46570189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 5135649 - 5135790
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | ||||||||||||||   |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||    
T  5135649 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggtt 5135746  T
Q  398 gcagggtgccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| ||||| ||||||||||||    
T  5135747 gcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacac 5135790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 5137875 - 5138016
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | ||||||||||||||   |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||    
T  5137875 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggtt 5137972  T
Q  398 gcagggtgccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| ||||| ||||||||||||    
T  5137973 gcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacac 5138016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 5143867 - 5143817
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||| | |||||||||||||||||||  |||||||||||||||||||||    
T  5143867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtga 5143817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 29761228 - 29761190
Alignment:
Q  311 gcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  29761228 gcttcaaatttgtggtctggaagaacagagaaatcgtga 29761190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 3778164 - 3778123
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  3778164 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 3778123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 5268700 - 5268741
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  5268700 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 5268741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 8689045 - 8689086
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  8689045 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 8689086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 12745942 - 12745862
Alignment:
Q  364 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||| | | || |||||||| || |||||||| | |||||||||||||| |||||||| |||||||| ||||    
T  12745942 cgtgacacgattttct-aggcagtgagctgtttggcagggtgtccaatcgtgacatgattttgggaaaacgtgacacgattt 12745862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 16628354 - 16628395
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  16628354 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 16628395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 38151919 - 38151960
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  38151919 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 38151960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 45356861 - 45356938
Alignment:
Q  363 tcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||| | ||||||||||||   |||||| || ||| |||||||| || |||||||||||||||||||||    
T  45356861 tcgtgacacgattt-gagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacac 45356938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 5143823 - 5143782
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcaggg 403  Q
    |||||||||||||||||  ||| |||||||||||||||||||    
T  5143823 atcgtgacacgattttgcaatgtcgtgagctggtttgcaggg 5143782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 10047981 - 10047940
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  10047981 ttggcttcaaatttgtggtttggaagaacagataaatcgtga 10047940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 16622775 - 16622816
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    ||||||| |||||||||||  |||||||||||||||||||||    
T  16622775 ttggcttaaaatttgtggtttggaagaacagagaaatcgtga 16622816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 26176150 - 26176069
Alignment:
Q  364 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||| ||||||||||  ||| || |||||| ||||||||||||| || |||||||  || |||||||| |||||||| ||||    
T  26176150 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaaccgtgacacaattttgggaaaacgtgacacgattt 26176069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 54882492 - 54882545
Alignment:
Q  392 tggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||| | |||||||||| ||| |||||||| |||||||| ||||    
T  54882492 tggtttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 54882545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 5370605 - 5370521
Alignment:
Q  362 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||| | ||| || ||| || ||| ||||| | | |||||||||| ||| ||||||||||||||||| ||||    
T  5370605 atcgtgacacgattttggtaatgtcgagagatgtttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgattt 5370521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 7e-59; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 298 - 445
Target Start/End: Complemental strand, 22709646 - 22709499
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||| |||||||||||||||||||||| |||||||||||    
T  22709646 gtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggttt 22709547  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22709546 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattt 22709499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 2172104 - 2171963
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| || |  ||||||||||||||||||||||| |||||||||||||||||||||    
T  2172104 tgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 2172005  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  2172004 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 2171963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 5674229 - 5674375
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| | |||||||||||||||||||| ||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||||    
T  5674229 tgttgatagttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 5674328  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||    
T  5674329 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacgattt 5674375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 3073343 - 3073197
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| ||||||||||  ||||||||| || ||||||||||||||||||||||| |||||||||||||||||| |     
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtcta 3073244  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| |||  | |||||||||||||| ||||    
T  3073243 cagggtgccaaatcgtgacacgattgttggaaatcgtgacacgattt 3073197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 299 - 418
Target Start/End: Complemental strand, 6097986 - 6097867
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||  |||||||||| |||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  6097986 tgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 6097887  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    |||||||| |||||||||||    
T  6097886 cagggtgctaaatcgtgaca 6097867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 411685 - 411826
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| ||||||| || |||||||||| || |||||||||| ||||||| |||| ||| ||||||||||| || ||    
T  411685 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtctg 411784  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||||||| |||  ||||||||||||||||    
T  411785 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacac 411826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 30125026 - 30125158
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  |||    
T  30125026 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgcc 30125125  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || ||| |||||||||||||||||    
T  30125126 aaatcgtggcacgattttgggaaatcgtgacac 30125158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 299 - 418
Target Start/End: Original strand, 26253589 - 26253708
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||| | ||| |    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagatagttag 26253688  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    ||||||||||||||||||||    
T  26253689 cagggtgccaaatcgtgaca 26253708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 308 - 445
Target Start/End: Complemental strand, 11857559 - 11857422
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  |||    
T  11857559 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgcc 11857460  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||| || ||||||||||||||||||||| ||||    
T  11857459 aaatcgtggcacgatcttgggaaatcgtgacacgattt 11857422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 14741934 - 14742066
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  | |||||||| |||||||||  |||    
T  14741934 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagtttgcaggacgcc 14742033  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||| ||||||||||||    
T  14742034 aaatcgtggcacgatcttggaaaatcgtgacac 14742066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 22010197 - 22010329
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |  ||||| || | |||||||||  |||    
T  22010197 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagttagtttgcaggacgcc 22010296  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  22010297 aaatcgtggcacgatcttgggaaatcgtgacac 22010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 23896957 - 23896811
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| ||||| |||||||||||||||  | ||||||||| ||||||||| || | |||||||||||||||||||||||| ||  |||||| |||||||    
T  23896957 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttg 23896858  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||| |||||||||  | ||| ||| ||||||||||||| ||||    
T  23896857 cagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattt 23896811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 27647467 - 27647608
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||| |||| |||||||||||||||| |||||||||| |||||||||| || | | ||||||||||||||||||| | | ||||||||||| | |||    
T  27647467 tgttgagttttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 27647566  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| |||||||| || |||  || |||||||||||||    
T  27647567 cagggtgcaaaatcgtggcacgattgtgagaaatcgtgacac 27647608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 16579101 - 16578961
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | | ||||||||||| | |||    
T  16579101 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 16579003  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| |||||||| || ||| | || ||||||||||||    
T  16579002 cagggtgcaaaatcgtggcacgatttgggaaaatcgtgacac 16578961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 16616279 - 16616419
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | | ||||||||||| | |||    
T  16616279 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 16616377  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| |||||||| || ||| | || ||||||||||||    
T  16616378 cagggtgcaaaatcgtggcacgatttgggaaaatcgtgacac 16616419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 440
Target Start/End: Original strand, 25420795 - 25420937
Alignment:
Q  297 agtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggt 395  Q
    |||||||||||| | |||||||||||||||| |||||||||| |||||||||| |||| ||||| | ||||||||||||| | ||||||||||||| ||     
T  25420795 agtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcg-gatgccgtgagctaggg 25420892  T
Q  396 ttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||   ||||||||| || ||| | || ||||||||||||    
T  25420893 ttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacac 25420937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 5756951 - 5757097
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| ||||||||| |||||| ||||    ||||| |||||||| |||| || | | |||||||||||||| ||||||| ||| |||||| |||||||    
T  5756951 tgttgaaatttggctttaaatttatggtttaaaagaatagagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgagttggtttg 5757050  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||| |||||||||  | ||| ||| ||||||||||||| ||||    
T  5757051 cagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattt 5757097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 16554454 - 16554594
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| |  | ||||| ||||||||||||||| | | ||||||||||| | ||     
T  16554454 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggtta 16554552  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| |||| ||| || ||| | || ||||||||||||    
T  16554553 cagggtgcaaaattgtggcacgatttgggaaaatcgtgacac 16554594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 16631010 - 16631150
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| |  | ||||| ||||||||||||||| | | ||||||||||| | ||     
T  16631010 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggtta 16631108  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| |||| ||| || ||| | || ||||||||||||    
T  16631109 cagggtgcaaaattgtggcacgatttgggaaaatcgtgacac 16631150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 440
Target Start/End: Complemental strand, 5266610 - 5266532
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| || |||||||||||||||||||||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacac 5266532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 6439075 - 6438943
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggtgc 406  Q
    |||||||||||||| ||||| ||||||||| ||||||||||| || | ||||| |||||||||||| || | | ||||||||| |  |||||| || |||    
T  6439075 ttggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgc 6438977  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
      ||||||| || |||||||||||||||||||||    
T  6438976 ataatcgtggcacgatcttgggaaatcgtgacac 6438943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 34166673 - 34166807
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  34166673 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 34166771  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     |||||||||||| ||| ||||| ||||||||||||    
T  34166772 gcaaatcgtgacacgattttgggaaaatcgtgacac 34166807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 6136547 - 6136407
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||  |||||||||| |||||||||| || | ||||| |||| |||||||||| | ||||||||||||| || ||    
T  6136547 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcg-gatgccgtgagctagggtt 6136450  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||    |||||||| || |||  ||||||||||||||||    
T  6136449 gcaggggtgaaaatcgtggcacgattgtgggaaatcgtgacac 6136407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 13150856 - 13150990
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| ||||||||||||||   |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  13150856 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 13150954  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     |||||||||||| ||| ||||| ||||||||||||    
T  13150955 gcaaatcgtgacacgattttgggaaaatcgtgacac 13150990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 5266645 - 5266604
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  5266645 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 5266604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 14737093 - 14737134
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  14737093 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 14737134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 28155133 - 28155211
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||| | | ||||||||||||   ||||||||||||| |||||||| || |||||||||||||||||||||    
T  28155133 atcgtgacacgatct-gagatgccgtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacac 28155211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 33342688 - 33342547
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||  |||||||||  |||||||||| || | ||||| |||| ||| |||||| | ||||||||||||| || ||    
T  33342688 tgttgagatt-gtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcg-gatgccgtgagctagggtt 33342591  T
Q  398 gcagggtgccaaatcgtgacatgatct-tgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| | ||||||||||||||||    
T  33342590 gcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacac 33342547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 14737128 - 14737206
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||   |  |||||||||| |||||||||  ||||||||||| || |||||||| ||||||||||||    
T  14737128 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacac 14737206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 28155098 - 28155139
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  28155098 ttggcttcaaatttgtggtctggaagaacagagcaatcgtga 28155139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 3809452 - 3809369
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||  ||| || |||||| || | |||||||| |||||||||| ||| ||||| || |||||||| ||||    
T  3809452 atcgtgacacgattttgcaatgtcgagagctgtttcgaagggtgcccaatcgtgacacgattttggggaaacgtgacacgattt 3809369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 16839331 - 16839190
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 396  Q
    |||||| | |||||||||||||||||||  |||||||||||| ||||||| |    ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  16839331 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtg-tcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 16839234  T
Q  397 tgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||| ||  || |||||||| || |||||||||||||||||||||    
T  16839233 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacac 16839190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 33329932 - 33330073
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 396  Q
    |||||| | |||||||||||||||||||  |||||||||||| ||||||| |    ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  33329932 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtg-tcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 33330029  T
Q  397 tgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||| ||  || |||||||| || |||||||||||||||||||||    
T  33330030 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacac 33330073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 34164451 - 34164585
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| ||||||||||||||   |||||||||| |||||||||| || | | ||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  34164451 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 34164549  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     ||||||||| || ||| ||||| ||||||||||||    
T  34164550 gcaaatcgtgtcacgattttgggaaaatcgtgacac 34164585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 5344056 - 5343990
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgat 374  Q
    |||||||||||||||||||  || |||||||||||||||||  || | || | ||||||||||||||    
T  5344056 ttggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 5016977 - 5017018
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  5016977 ttggcttcaaatttgtggtttggaagaacagaaaaatcgtga 5017018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 31085954 - 31085995
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  31085954 ttggcttcaaatttgtggtttagaagaacagagaaatcgtga 31085995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 440
Target Start/End: Complemental strand, 5343956 - 5343924
Alignment:
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||||||||||||||    
T  5343956 aaatcgtgacacgatcttgggaaatcgtgacac 5343924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 347
Target Start/End: Original strand, 33335429 - 33335477
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgt 347  Q
    |||||| | |||||||||||||||||||  |||||||||||| ||||||    
T  33335429 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgt 33335477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 7e-59; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 298 - 445
Target Start/End: Original strand, 33386136 - 33386283
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  33386136 gtgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 33386235  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||| ||| ||| | ||||||||||| ||||    
T  33386236 gcagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattt 33386283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 26928080 - 26928226
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  26928080 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 26928179  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||  |||||| | ||||||||||| ||||    
T  26928180 cagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattt 26928226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 23198530 - 23198384
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 23198431  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||| | | | ||||||||||| ||||    
T  23198430 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgattt 23198384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 23200729 - 23200583
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtttg 23200630  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||| | | | ||||||||||| ||||    
T  23200629 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgattt 23200583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 1306604 - 1306463
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||| |  ||||||||||||||||||||||| ||| || ||||||||||||||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtttg 1306505  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  1306504 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 1306463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 298 - 445
Target Start/End: Complemental strand, 27453582 - 27453435
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  27453582 gtgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 27453483  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    | |||||||||||||||||||||||  || | ||||||||||| ||||    
T  27453482 gtagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattt 27453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 800685 - 800831
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||| ||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 800784  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    | |||||||||||||||||| |||  |||||||||||||||| ||||    
T  800785 cggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 37726299 - 37726153
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||    
T  37726299 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggtttg 37726200  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||| |||||||||||| ||| ||| | ||||||||||| ||||    
T  37726199 cagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattt 37726153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 418
Target Start/End: Complemental strand, 7782712 - 7782593
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggtttg 7782613  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    ||||||||||||||||||||    
T  7782612 cagggtgccaaatcgtgaca 7782593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 40372264 - 40372396
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  |||    
T  40372264 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgcc 40372363  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  40372364 aaatcgtggcacgatcttgggaaatcgtgacac 40372396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 8477994 - 8477862
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| |||||||||||||||| |||| || | ||||||||||||||||||||| | | ||||||||||| |||||| || ||||    
T  8477994 ttggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgctggatgcc 8477895  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  8477894 aaatcgtggcacgatcttgggaaatcgtgacac 8477862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 22172670 - 22172802
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||||  |||||||||  |||    
T  22172670 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcaggacgcc 22172769  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  22172770 aaatcgtggcacgatcttgggaaatcgtgacac 22172802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 299 - 415
Target Start/End: Original strand, 37408036 - 37408152
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||||||||| || | | ||||||||||||||||||||||  |||||||||||||||||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtttg 37408135  T
Q  399 cagggtgccaaatcgtg 415  Q
    ||||||| |||||||||    
T  37408136 cagggtgtcaaatcgtg 37408152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 18657021 - 18656888
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtg-agctggtttgcagggtgc 406  Q
    |||||||||||||||||||| | ||||||||||||||| ||| || | ||||||||||||||||||||| ||| ||||||| |||  |||||||||  ||    
T  18657021 ttggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgc 18656922  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||| |||||||||||||||||||||    
T  18656921 caaatcgtgacacgatcttgggaaatcgtgacac 18656888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 7167874 - 7167742
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    ||||||||||||||||| || ||||||||||||||||||||| || | |||||||||||||||| ||||   | ||||||||||| |||||||||  |||    
T  7167874 ttggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagtttgcaggacgcc 7167775  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  7167774 aaatcgtggcacgatcttgggaaatcgtgacac 7167742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 308 - 444
Target Start/End: Original strand, 28503327 - 28503463
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||| | ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||| ||  |||    
T  28503327 ttggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgctggacgcc 28503426  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacacaatt 444  Q
    |||||||| || |||||||||||||||||||||||||    
T  28503427 aaatcgtggcacgatcttgggaaatcgtgacacaatt 28503463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 28501160 - 28501292
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||| | ||||||||||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||   ||    
T  28501160 ttggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacacc 28501259  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||| ||||||||||||    
T  28501260 aaatcgtggcacgatcttggaaaatcgtgacac 28501292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 296 - 440
Target Start/End: Original strand, 54634707 - 54634850
Alignment:
Q  296 aagtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggt 395  Q
    ||||||||||||| | |||||||||||||||| |||||||||| |||||||||| || | |||||||| |||||||||||| | | |||||||||||       
T  54634707 aagtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaag 54634805  T
Q  396 ttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||| || |||  ||||||||||||||||    
T  54634806 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacac 54634850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 32143884 - 32143801
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||| ||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattt 32143801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 6716085 - 6716225
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | ||| |||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | | ||||||||||| | |||    
T  6716085 tgttgagatt-gtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 6716183  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| |||||||| || |||  ||||||||||||||||    
T  6716184 cagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacac 6716225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 362 - 445
Target Start/End: Original strand, 27986001 - 27986084
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  || | ||||||||||| ||||    
T  27986001 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattt 27986084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 440
Target Start/End: Original strand, 27352092 - 27352221
Alignment:
Q  311 gcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaa 410  Q
    |||| ||||||||||||  |||||||||| ||||||||| || | |||||||||||||||||||||   | ||||||||||| ||||||||    |||||    
T  27352092 gctttaaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttgcagaacaccaaa 27352191  T
Q  411 tcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||| || |||||||||||||||||||||    
T  27352192 tcgtggcacgatcttgggaaatcgtgacac 27352221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 3617034 - 3617174
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||    
T  3617034 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 3617131  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| | || ||||||||||||    
T  3617132 gcaggggtgcaaatcgtgtcacgatttgggaaaatcgtgacac 3617174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 445
Target Start/End: Original strand, 2671121 - 2671210
Alignment:
Q  356 tttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||| |||||   | ||||||||||| ||||||||| |||||||||||| || ||||||||||||||||||||| ||||    
T  2671121 tttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattt 2671210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 27974477 - 27974530
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtg 415  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  27974477 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtg 27974530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 440
Target Start/End: Complemental strand, 4601329 - 4601187
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 396  Q
    ||||||||||| | |||||||||||||||  |||||||||| |||||||||| || | ||||| |||| |||||||||| | ||||||||||||| || |    
T  4601329 gtgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagctagggt 4601232  T
Q  397 tgcagggtgccaaatcgtgacatgatct-tgggaaatcgtgacac 440  Q
    |||||||   ||||||||| || ||| | ||||||||||||||||    
T  4601231 tgcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacac 4601187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 4599107 - 4598966
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||  |||||||||| |||||||||| || | ||||| |||| |||||||||| | ||||||||||||| || ||    
T  4599107 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagctagggtt 4599010  T
Q  398 gcagggtgccaaatcgtgacatgatct-tgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| | ||||||||||||||||    
T  4599009 gcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacac 4598966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 10055812 - 10055946
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  10055812 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10055910  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     |||||||||||| ||| ||||| ||||||||||||    
T  10055911 gcaaatcgtgacacgattttgggaaaatcgtgacac 10055946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 10058034 - 10058168
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  10058034 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10058132  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     |||||||||||| ||| ||||| ||||||||||||    
T  10058133 gcaaatcgtgacacgattttgggaaaatcgtgacac 10058168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 10060256 - 10060390
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  10060256 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10060354  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     |||||||||||| ||| ||||| ||||||||||||    
T  10060355 gcaaatcgtgacacgattttgggaaaatcgtgacac 10060390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 10062478 - 10062612
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  10062478 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10062576  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     |||||||||||| ||| ||||| ||||||||||||    
T  10062577 gcaaatcgtgacacgattttgggaaaatcgtgacac 10062612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 10064700 - 10064834
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  10064700 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10064798  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     |||||||||||| ||| ||||| ||||||||||||    
T  10064799 gcaaatcgtgacacgattttgggaaaatcgtgacac 10064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 10066922 - 10067056
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtg 405  Q
    |||| |||||||||||||||  |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||      
T  10066922 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10067020  T
Q  406 ccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
     |||||||||||| ||| ||||| ||||||||||||    
T  10067021 gcaaatcgtgacacgattttgggaaaatcgtgacac 10067056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 32143928 - 32143878
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtga 32143878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 2672425 - 2672559
Alignment:
Q  306 atttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggt 404  Q
    |||||||||||||||||||||| |||||||||||| |||||||  || | ||||  |||||||||||| |  | ||||||| ||| |  |||||| ||      
T  2672425 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacga-tcggagatgccgggagccaagtttgctggaa 2672523  T
Q  405 gccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    || |||||||| || |||||||||||||||||||||    
T  2672524 gcaaaatcgtgccacgatcttgggaaatcgtgacac 2672559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 27974432 - 27974483
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  27974432 gtgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtga 27974483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 6718331 - 6718409
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| || |||  ||||||||||||||||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacac 6718409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 445
Target Start/End: Complemental strand, 21711817 - 21711680
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgc 406  Q
    |||||||||||||||||||  ||||||||||||||||||||| || | ||   || |||| |||||||||   | || |||||| |||||| ||||||||    
T  21711817 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcttcaacgtgtcacgatttt-ccaggcagtgagcatggttttcagggtgc 21711719  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
      ||||||| || ||| |||||||| |||||||||||||    
T  21711718 tcaatcgtgtcacgattttgggaaaacgtgacacaattt 21711680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 25637013 - 25637153
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | ||| |||||||||||| |||||||||| |||||||||| || | | ||||||||||||||||||| | | || || ||||| || ||    
T  25637013 tgttgagatt-gtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtg-cgagagctagggtt 25637110  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || |||  ||||||||||||||||    
T  25637111 gcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacac 25637153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 8738550 - 8738591
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  8738550 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 8738591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 9090788 - 9090829
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  9090788 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 9090829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 2676581 - 2676649
Alignment:
Q  306 atttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgat 374  Q
    |||||||||||||||||||||| |||||||||||| |||||||  || | ||||  |||||||||||||    
T  2676581 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2676649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 440
Target Start/End: Original strand, 10208777 - 10208919
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 396  Q
    ||||||||||| | |||||||||||||||  |||||||||| |||||| ||| || | ||||| |||||||| |||||| | ||||||||||| | || |    
T  10208777 gtgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggt 10208874  T
Q  397 tgcagggtgccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
    |||||||   ||||||||| || ||| ||||| ||||||||||||    
T  10208875 tgcaggggtgcaaatcgtggcacgattttgggaaaatcgtgacac 10208919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 440
Target Start/End: Original strand, 8738605 - 8738663
Alignment:
Q  382 tgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||  || |||||||| || |||||||||||||||||||||    
T  8738605 tgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacac 8738663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 440
Target Start/End: Original strand, 9090843 - 9090901
Alignment:
Q  382 tgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||  || |||||||| || |||||||||||||||||||||    
T  9090843 tgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacac 9090901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 45282628 - 45282706
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| || |||||||| ||| | || ||||||||||||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacac 45282706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 1730917 - 1730958
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  1730917 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 1730958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 431
Target Start/End: Original strand, 10210978 - 10211109
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | ||| |||||||||||  |||||||||| |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||    
T  10210978 tgttgagatt-gtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttag-gatgccgtgagttagggtt 10211075  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaa 431  Q
    ||||||   ||||||||| || ||| ||||||||    
T  10211076 gcaggggtgcaaatcgtggcacgattttgggaaa 10211109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 30709267 - 30709308
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  30709267 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 30709308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 36029708 - 36029667
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  36029708 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 36029667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 5258674 - 5258590
Alignment:
Q  362 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||| | ||| || |||||||||| || || | | |||||||||| ||| ||||||||||||||||| ||||    
T  5258674 atcgtgacacgattttggtaatgtcgagagctggttttcaaggcgtccaatcgtgacacgattttgggaaatcgtgacacgattt 5258590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 414
Target Start/End: Original strand, 24694656 - 24694764
Alignment:
Q  308 ttggcttcaaatttgtggtcc-ggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtg 405  Q
    |||||||||||||||||||   |||||||||||||||||||||||| | ||   || |||| ||||||||||  ||| ||||||| || |||||||||||    
T  24694656 ttggcttcaaatttgtggttttggaagaacagagaaatcgtgatacgatttcatcaacgtgtcacgattttgcaatgtcgtgagcatgttttgcagggtg 24694755  T
Q  406 ccaaatcgt 414  Q
     | ||||||    
T  24694756 tccaatcgt 24694764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 6718288 - 6718337
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||| | |||||||||||||||| |||||||||| ||||||||||    
T  6718288 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtga 6718337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 39032017 - 39032067
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||| | |||||||||||||||| ||  |||||||||||||||||||||    
T  39032017 tgttgaaaattggcttcaaatttgttgtttggaagaacagagaaatcgtga 39032067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 40845283 - 40845229
Alignment:
Q  295 aaagtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||| |||||||||| || |  || ||||||||||||||||||    
T  40845283 aaagtgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtga 40845229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 45282585 - 45282634
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||| | |||||||||||||||| |||||||||| ||||||||||    
T  45282585 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtga 45282634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 49200196 - 49200114
Alignment:
Q  364 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||| ||||||||||  ||||||||||| || ||||||||||| | |||||||||| ||| ||||| || |||||||| ||||    
T  49200196 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgatgttggggaaacgtgacacgattt 49200114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 16264945 - 16264904
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||| ||||||||||    
T  16264945 ttggcttcaaatttgtggtttggaagaacagcgaaatcgtga 16264904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 27027318 - 27027281
Alignment:
Q  312 cttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||  |||||||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtga 27027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 40592253 - 40592294
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  40592253 ttggcttcaaatttgtggtttggaagaacggagaaatcgtga 40592294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 40734087 - 40734124
Alignment:
Q  312 cttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||  |||||||||||||||||||||    
T  40734087 cttcaaatttgtggtttggaagaacagagaaatcgtga 40734124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 440
Target Start/End: Complemental strand, 32475963 - 32475931
Alignment:
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||||||||||||||    
T  32475963 aaatcgtgacacgatcttgggaaatcgtgacac 32475931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 440
Target Start/End: Complemental strand, 32480821 - 32480789
Alignment:
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||||||||||||||    
T  32480821 aaatcgtgacacgatcttgggaaatcgtgacac 32480789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 26288517 - 26288371
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  26288517 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26288418  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  26288417 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattt 26288371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 26301774 - 26301628
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  26301774 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26301675  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  26301674 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattt 26301628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 26313768 - 26313622
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  26313768 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26313669  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  26313668 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattt 26313622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 297 - 445
Target Start/End: Original strand, 2627316 - 2627464
Alignment:
Q  297 agtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtt 396  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||||| |||||||||||||    
T  2627316 agtgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggtt 2627415  T
Q  397 tgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||| ||||    
T  2627416 tgcatggtgccaaatcgtgacacgattttgggaaatcgtgacacgattt 2627464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 1261414 - 1261560
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| |||||| ||||||||||||||  ||||||||| |||||||| || || ||||||||||||||||||||||| ||||||||||||||| |||||    
T  1261414 tgttgatatttggtttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttg 1261513  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1261514 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattt 1261560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 418
Target Start/End: Original strand, 31042908 - 31043027
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||||| ||| |||||||||||||||||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggtttg 31043007  T
Q  399 cagggtgccaaatcgtgaca 418  Q
    ||||||||||||||||||||    
T  31043008 cagggtgccaaatcgtgaca 31043027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 33037295 - 33037427
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  |||    
T  33037295 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgcc 33037394  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||| |||||||||||||||||||||    
T  33037395 aaatcgtgacacgatcttgggaaatcgtgacac 33037427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 18852635 - 18852767
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||   | ||||||||||| |||||||||  |||    
T  18852635 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgcc 18852734  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  18852735 aaatcgtggcacgatcttgggaaatcgtgacac 18852767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 308 - 445
Target Start/End: Original strand, 4759542 - 4759679
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||| |||||||||||||||| | | ||||||||||| |||||||||  |||    
T  4759542 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgcc 4759641  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||| || ||||||||||||||||||||| ||||    
T  4759642 aaatcgtggcacgatcttgggaaatcgtgacacgattt 4759679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 10683747 - 10683879
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   | ||||||||||| |||||||||  |||    
T  10683747 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgcc 10683846  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  10683847 aaatcgtggcacgatcttgggaaatcgtgacac 10683879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 18870029 - 18870161
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   |||| |||||||| |||||||||  |||    
T  18870029 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgcaggacgcc 18870128  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  18870129 aaatcgtggcacgatcttgggaaatcgtgacac 18870161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 30656274 - 30656142
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||   | ||||||||||| |||||||||  |||    
T  30656274 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgcc 30656175  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  30656174 aaatcgtggcacgatcttgggaaatcgtgacac 30656142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 36980006 - 36979874
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  |||    
T  36980006 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgcc 36979907  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||| ||||||||||||    
T  36979906 aaatcgtggcacgatcttggaaaatcgtgacac 36979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 7412952 - 7412806
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| ||||| |||||||||||||||  ||||||||||||||||||||| || | |||||||||||||||||||| ||| ||||||||||||||||||    
T  7412952 tgttgaaatttgacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttg 7412853  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||| |||||||||  |  || ||| ||||||||||||| ||||    
T  7412852 cagggtgtcaaatcgtggtacaattttgtgaaatcgtgacacgattt 7412806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 6311927 - 6311795
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||| ||| || | |||||||||||||||||||||   | ||||||||||| |||||||||  |||    
T  6311927 ttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgcc 6311828  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  6311827 aaatcgtggcacgatcttgggaaatcgtgacac 6311795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 3439088 - 3439227
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||| | |||||||||||||||  ||||||||||||||||||||| || | | ||||||||||||||||||| | | ||||||||||| | |||    
T  3439088 tgttgagatt-gtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 3439186  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| ||||||||||| ||| |||||||||||||||||    
T  3439187 cagggtgcaaaatcgtgacacgat-ttgggaaatcgtgacac 3439227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 25327672 - 25327804
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||| ||||| ||||||||   |  || ||||||| |||||||||  |||    
T  25327672 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagtttgcaggacgcc 25327771  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||| || || |||||||||||||||||||||    
T  25327772 aaatcatggcacgatcttgggaaatcgtgacac 25327804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 312 - 440
Target Start/End: Original strand, 7289439 - 7289568
Alignment:
Q  312 cttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattt--tgtgatgccgtgagctggtttgcagggtgccaa 409  Q
    |||||||||||||||| |||||||||||||||| |||| || | |||||||||||||||||||||   | || ||| |||||| |||||||||  |||||    
T  7289439 cttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaaggga-gccatgagctagtttgcaggacgccaa 7289537  T
Q  410 atcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||| |||||||| ||||||||||||    
T  7289538 atcgtgacacgatcttggaaaatcgtgacac 7289568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 39784333 - 39784465
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || |||    
T  39784333 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 39784431  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  39784432 aaaatcgtggcacgatcttgggaaatcgtgacac 39784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 10688661 - 10688739
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||   | ||||||||||| |||||||||  ||||||||||| || |||||||||||||||||||||    
T  10688661 atcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacac 10688739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 440
Target Start/End: Original strand, 15290142 - 15290284
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 396  Q
    ||||||||||| | |||||||||||||||  |||||||||| |||||||||| || | ||||| || | |||||||||| | ||||||||||| | || |    
T  15290142 gtgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcg-gatgccgtgagttagggt 15290239  T
Q  397 tgcagggtgccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
    |||||||   |||||||||||| ||| ||||| ||||||||||||    
T  15290240 tgcaggggtgcaaatcgtgacacgattttgggaaaatcgtgacac 15290284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 440
Target Start/End: Original strand, 15470511 - 15470653
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 396  Q
    ||||||||||| | |||||||||||||||  |||||||||| |||||||||| || | ||||| || | |||||||||| | ||||||||||| | || |    
T  15470511 gtgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcg-gatgccgtgagttagggt 15470608  T
Q  397 tgcagggtgccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
    |||||||   |||||||||||| ||| ||||| ||||||||||||    
T  15470609 tgcaggggtgcaaatcgtgacacgattttgggaaaatcgtgacac 15470653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 42575909 - 42575768
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||  |||||||||| |||||||||| || | ||||| |||| |||||||||| | ||||||||||| | || ||    
T  42575909 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagttagggtt 42575812  T
Q  398 gcagggtgccaaatcgtgacatgatcttggg-aaatcgtgacac 440  Q
    ||||||   ||||||||| || ||| ||||| ||||||||||||    
T  42575811 gcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacac 42575768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 10688626 - 10688667
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  10688626 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 10688667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 445
Target Start/End: Complemental strand, 1746773 - 1746664
Alignment:
Q  336 cagagaaatcgtgatacaaatttggca-tcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatc 433  Q
    |||||||||||||| |||| ||||||| |||||||||||||||| | ||| || |||||| ||| ||||| | | |||||||||| ||| ||||||||||    
T  1746773 cagagaaatcgtgacacaa-tttggcaatcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacgattttgggaaatc 1746676  T
Q  434 gtgacacaattt 445  Q
    ||||||| ||||    
T  1746675 gtgacacgattt 1746664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 25689561 - 25689610
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||    
T  25689561 tgttgagatt-gtcttcaaatttgtggtctggaagaacagagaaatcgtga 25689610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 5701960 - 5702001
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  5701960 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 5702001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 19945869 - 19945785
Alignment:
Q  362 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||| | ||| || |||||||||| ||||| | | |||||||||| ||| || |||||||||||||| ||||    
T  19945869 atcgtgacacgattttgataatgtcgagagctggttttcagggcgtccaatcgtgacacgattttaggaaatcgtgacacgattt 19945785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 445
Target Start/End: Original strand, 31217895 - 31217979
Alignment:
Q  362 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||| | ||| || |||||||||| ||||| | | ||| |||||| ||| ||||||||||||||||| ||||    
T  31217895 atcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaattgtgacacgattttgggaaatcgtgacacgattt 31217979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 445
Target Start/End: Original strand, 43036062 - 43036146
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||| |  ||||||||||| || ||||||||||| | |||||||||| ||| |||| ||| |||||||| ||||    
T  43036062 atcgtgacacgatttcgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattt 43036146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 4456625 - 4456583
Alignment:
Q  307 tttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    ||||||||||||||||||||  ||||||||| |||||||||||    
T  4456625 tttggcttcaaatttgtggtttggaagaacaaagaaatcgtga 4456583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 25689604 - 25689681
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| || |||  ||||||||||| ||||    
T  25689604 atcgtgacacgatttcggg-tgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacac 25689681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 42435736 - 42435654
Alignment:
Q  364 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||| ||||||||||  ||||||||||| || ||||||||||| | |||||||||| ||| ||||| || |||||||| ||||    
T  42435736 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaacgtgacacgattt 42435654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 35745979 - 35745930
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtg 348  Q
    |||||| | |||||||||||||||||||  |||||||||||| |||||||    
T  35745979 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtg 35745930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 34257033 - 34256950
Alignment:
Q  362 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||||||||||||| | ||| || |||||| ||| ||||| | | |||||||||| ||| ||||||||||||||||| ||||    
T  34257033 atcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacgattttgggaaatcgtgacacgattt 34256950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 298 - 418
Target Start/End: Original strand, 7910 - 8030
Alignment:
Q  298 gtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 397  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||    
T  7910 gtgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggttt 8009  T
Q  398 gcagggtgccaaatcgtgaca 418  Q
    |||||||||||||||||||||    
T  8010 gcagggtgccaaatcgtgaca 8030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 299 - 440
Target Start/End: Original strand, 21939 - 22080
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| || |  ||||||||||||||||||||||| | | ||||||||||| |||||    
T  21939 tgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagtttg 22038  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||  |||||||||||||| |||||||||||||||||||||    
T  22039 caggacgccaaatcgtgacacgatcttgggaaatcgtgacac 22080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 519 - 628
Alignment:
Q  336 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgt 435  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||    
T  519 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcgt 618  T
Q  436 gacacaattt 445  Q
    ||||| ||||    
T  619 gacacgattt 628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 299 - 439
Target Start/End: Original strand, 132752 - 132892
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||||| || | | ||| |||||| ||||||||||||||| ||||||||||||||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 132851  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgaca 439  Q
    ||| ||| |||||||||||| ||| ||| | ||||||||||    
T  132852 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgaca 132892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 6301 - 6260
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  6301 ttggcttcaaatttgtggtttggaagaacagagaaatcgtga 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 345
Target Start/End: Complemental strand, 3109 - 3072
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatc 345  Q
    |||||||||||||||||||  |||||||||||||||||    
T  3109 ttggcttcaaatttgtggtttggaagaacagagaaatc 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 1083 - 1229
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 398  Q
    |||||| ||||| |||||||||||||||  | ||||||||| ||||||||| || | |||||||||||||||||||||||| ||  |||||| |||||||    
T  1083 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttg 1182  T
Q  399 cagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    ||||||| |||||||||  | ||| ||| ||||||||||||| ||||    
T  1183 cagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattt 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 306 - 439
Target Start/End: Original strand, 43441 - 43574
Alignment:
Q  306 atttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtg 405  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||| || | | |||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  43441 atttggcttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagctggtttacagggtg 43540  T
Q  406 ccaaatcgtgacatgatcttgggaaatcgtgaca 439  Q
     |||||||||  | ||| ||| ||||||||||||    
T  43541 tcaaatcgtggtacgattttgtgaaatcgtgaca 43574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 370 - 445
Target Start/End: Original strand, 36376 - 36451
Alignment:
Q  370 acgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||| || ||| ||| |||| |||||||||||||    
T  36376 acgattttgtaatgtcgtgagctggtttgcagggtgtcaaatcgtggcacgattttgtgaaaacgtgacacaattt 36451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 36324 - 36377
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatac 352  Q
    |||||| | |||||||||||||||||||  ||||||||||||||||| ||||||    
T  36324 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcatgatac 36377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 3345 - 3477
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||| ||||||||||||| || | |||| ||||||||||||||||   |  |||||||||| ||||| |||  |||    
T  3345 ttggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagtttgaaggacgcc 3444  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  3445 aaatcgtggcacgatcttgggaaatcgtgacac 3477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 34562 - 34694
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgcc 407  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||| ||||   |  ||||| || | ||||||| |  |||    
T  34562 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagtttgtttgcatgacgcc 34661  T
Q  408 aaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||| || |||||||||||||||||||||    
T  34662 aaatcgtggcacgatcttgggaaatcgtgacac 34694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 440
Target Start/End: Complemental strand, 3187 - 3045
Alignment:
Q  297 agtgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggt 395  Q
    |||||||||||| | |||||||||||||||| |||||||||| |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| ||     
T  3187 agtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctaggg 3090  T
Q  396 ttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||||   ||||||||| || |||  ||||||||||||||||    
T  3089 ttgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacac 3045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 937 - 805
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgc 406  Q
    |||||||||||||||||||  ||||||||||||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || |||    
T  937 ttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 839  T
Q  407 caaatcgtgacatgatcttgggaaatcgtgacac 440  Q
     |||||||| || |||||||||||||||||||||    
T  838 aaaatcgtggcacgatcttgggaaatcgtgacac 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 1717 - 1784
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgatt 375  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | ||||| ||||||||||||||    
T  1717 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 4310 - 4170
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||  || | ||||| ||||||||||||||||  | ||||||||||| || ||    
T  4310 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatttt-aggtgccgtgagctagggtt 4213  T
Q  398 gcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    ||||||   ||||||||| || |||  ||||||||||||||||    
T  4212 gcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacac 4170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 359
Target Start/End: Complemental strand, 45804 - 45744
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttg 359  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||    
T  45804 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

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Target: scaffold0098; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 45760 - 45677
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacacaattt 445  Q
    |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||| || |||  || ||||||||||||| ||||    
T  45760 atcgtgacacaattttgtaatgtcgtgagctgatttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattt 45677  T

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Target: scaffold0665 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 8265 - 8224
Alignment:
Q  308 ttggcttcaaatttgtggtccggaagaacagagaaatcgtga 349  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  8265 ttggcttcaaatttgtggtctggaagaacagagaaatcgtga 8224  T

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Target: scaffold0665; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 440
Target Start/End: Complemental strand, 8230 - 8152
Alignment:
Q  362 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgatcttgggaaatcgtgacac 440  Q
    |||||||||||||||   |  |||||||||| |||||||||  ||||||||||| || |||||||| ||||||||||||    
T  8230 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacac 8152  T

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Target: scaffold0137 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 415
Target Start/End: Original strand, 5859 - 5974
Alignment:
Q  299 tgttgagatttggcttcaaatttgtggtccggaagaacagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggttt 397  Q
    |||||||||| | |||||||||||||||| |||||||||| |||||||||  || | |||||  ||||||||||| || | | ||||||||||| || ||    
T  5859 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacga-ttggaggtgccgtgagctagggtt 5956  T
Q  398 gcagggtgccaaatcgtg 415  Q
    ||||||||| || |||||    
T  5957 gcagggtgcaaattcgtg 5974  T

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