View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1213_low_1 (Length: 824)

Name: NF1213_low_1
Description: NF1213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1213_low_1
NF1213_low_1
[»] chr3 (81 HSPs)
chr3 (30-817)||(3354607-3355396)
chr3 (34-314)||(3723573-3723852)
chr3 (30-261)||(3219270-3219501)
chr3 (695-810)||(3724063-3724179)
chr3 (30-194)||(3196234-3196398)
chr3 (46-261)||(3215671-3215886)
chr3 (317-426)||(3723899-3724009)
chr3 (30-194)||(3308496-3308660)
chr3 (44-170)||(3203054-3203180)
chr3 (43-185)||(3301820-3301962)
chr3 (426-532)||(50420830-50420936)
chr3 (433-525)||(3354755-3354847)
chr3 (575-670)||(3354898-3354993)
chr3 (425-532)||(16883743-16883850)
chr3 (44-261)||(3300035-3300253)
chr3 (441-515)||(33687618-33687692)
chr3 (426-532)||(43902531-43902636)
chr3 (425-518)||(17258153-17258246)
chr3 (425-525)||(33381507-33381608)
chr3 (588-669)||(33687611-33687692)
chr3 (534-670)||(33687885-33688022)
chr3 (427-520)||(33687935-33688028)
chr3 (422-506)||(49579147-49579231)
chr3 (534-670)||(50420794-50420929)
chr3 (745-817)||(3216463-3216535)
chr3 (588-663)||(16883760-16883835)
chr3 (541-666)||(1429466-1429591)
chr3 (534-670)||(33381515-33381652)
chr3 (425-518)||(53255247-53255340)
chr3 (426-518)||(40988597-40988689)
chr3 (534-662)||(43902545-43902672)
chr3 (427-518)||(2181315-2181406)
chr3 (424-518)||(49002724-49002818)
chr3 (441-518)||(51224940-51225017)
chr3 (421-518)||(54476037-54476134)
chr3 (427-499)||(53254963-53255035)
chr3 (425-512)||(33944838-33944925)
chr3 (426-500)||(15311838-15311911)
chr3 (429-507)||(16883493-16883571)
chr3 (441-499)||(32772022-32772080)
chr3 (421-519)||(51315706-51315804)
chr3 (459-496)||(1807645-1807682)
chr3 (441-518)||(10732370-10732447)
chr3 (441-518)||(17256582-17256659)
chr3 (534-667)||(37755110-37755242)
chr3 (597-670)||(49579147-49579220)
chr3 (534-666)||(53254973-53255105)
chr3 (441-518)||(55228029-55228106)
chr3 (540-663)||(26465980-26466104)
chr3 (441-508)||(26465981-26466049)
chr3 (478-518)||(43902789-43902829)
chr3 (462-518)||(47284514-47284570)
chr3 (427-518)||(35495171-35495261)
chr3 (428-499)||(36315790-36315861)
chr3 (745-811)||(3296732-3296798)
chr3 (596-666)||(16883501-16883571)
chr3 (537-670)||(32831166-32831300)
chr3 (541-670)||(53255202-53255332)
chr3 (426-499)||(1807415-1807487)
chr3 (426-499)||(20432189-20432262)
chr3 (426-499)||(32831470-32831543)
chr3 (428-493)||(37755185-37755250)
chr3 (421-518)||(40989621-40989718)
chr3 (421-518)||(46934210-46934307)
chr3 (425-489)||(3193033-3193097)
chr3 (329-382)||(3203358-3203413)
chr3 (584-663)||(17258152-17258231)
chr3 (746-800)||(3203682-3203736)
chr3 (335-398)||(3219180-3219246)
chr3 (428-518)||(32831161-32831251)
chr3 (534-564)||(45333730-45333760)
chr3 (441-499)||(50381548-50381606)
chr3 (441-499)||(51226492-51226550)
chr3 (423-516)||(1429512-1429605)
chr3 (330-363)||(3308314-3308347)
chr3 (447-504)||(11334712-11334769)
chr3 (426-483)||(14340732-14340789)
chr3 (430-519)||(44586008-44586097)
chr3 (429-518)||(51453544-51453632)
chr3 (421-518)||(54716470-54716567)
chr3 (462-499)||(54716748-54716785)
[»] chr1 (86 HSPs)
chr1 (534-665)||(39384500-39384630)
chr1 (419-532)||(29816381-29816493)
chr1 (423-532)||(39384536-39384645)
chr1 (429-532)||(10532466-10532569)
chr1 (533-670)||(13575073-13575209)
chr1 (423-532)||(10532211-10532319)
chr1 (429-518)||(13575125-13575213)
chr1 (595-663)||(1406597-1406665)
chr1 (428-499)||(37008218-37008289)
chr1 (533-670)||(29816343-29816479)
chr1 (425-518)||(51549363-51549456)
chr1 (441-517)||(1484384-1484460)
chr1 (425-532)||(367128-367235)
chr1 (430-521)||(1484643-1484734)
chr1 (441-532)||(10231085-10231176)
chr1 (424-515)||(39384235-39384325)
chr1 (425-517)||(29816117-29816206)
chr1 (538-670)||(10532221-10532353)
chr1 (585-670)||(10532480-10532565)
chr1 (537-670)||(37008223-37008355)
chr1 (421-508)||(1406597-1406684)
chr1 (586-665)||(1484381-1484460)
chr1 (533-670)||(7196682-7196820)
chr1 (426-532)||(10230786-10230891)
chr1 (421-517)||(46895431-46895527)
chr1 (426-518)||(46895763-46895855)
chr1 (536-666)||(10231049-10231180)
chr1 (430-517)||(31651337-31651423)
chr1 (588-670)||(1484649-1484731)
chr1 (586-670)||(29816125-29816206)
chr1 (447-521)||(39411873-39411946)
chr1 (421-499)||(41915764-41915842)
chr1 (534-670)||(39384244-39384380)
chr1 (429-518)||(40876968-40877057)
chr1 (421-532)||(366880-366991)
chr1 (425-485)||(3814758-3814818)
chr1 (449-532)||(84229-84312)
chr1 (441-499)||(7058365-7058423)
chr1 (426-515)||(51690426-51690515)
chr1 (425-485)||(3815052-3815112)
chr1 (534-633)||(13574860-13574960)
chr1 (548-667)||(40876930-40877050)
chr1 (427-518)||(7196676-7196767)
chr1 (426-485)||(12075269-12075328)
chr1 (424-499)||(31907934-31908009)
chr1 (588-654)||(84246-84312)
chr1 (426-484)||(3612445-3612503)
chr1 (588-666)||(10230797-10230874)
chr1 (451-505)||(22347541-22347595)
chr1 (541-623)||(37008466-37008548)
chr1 (471-521)||(37008507-37008557)
chr1 (421-499)||(43117249-43117327)
chr1 (424-518)||(50503698-50503792)
chr1 (588-638)||(51690426-51690476)
chr1 (421-518)||(13344398-13344495)
chr1 (470-515)||(13574860-13574905)
chr1 (426-519)||(46573049-46573142)
chr1 (533-638)||(367088-367195)
chr1 (462-518)||(6606922-6606978)
chr1 (429-485)||(12074958-12075014)
chr1 (431-475)||(23953116-23953160)
chr1 (426-514)||(39642199-39642287)
chr1 (425-517)||(44743694-44743785)
chr1 (424-483)||(35820110-35820169)
chr1 (585-656)||(39411876-39411946)
chr1 (459-518)||(49695382-49695441)
chr1 (457-508)||(51548382-51548433)
chr1 (478-532)||(1406362-1406416)
chr1 (534-623)||(1406364-1406454)
chr1 (424-518)||(15788407-15788501)
chr1 (421-475)||(25085393-25085447)
chr1 (424-474)||(25486479-25486529)
chr1 (424-518)||(35580891-35580985)
chr1 (457-499)||(40345312-40345354)
chr1 (462-520)||(40345551-40345609)
chr1 (441-499)||(50504792-50504850)
chr1 (421-499)||(51462175-51462252)
chr1 (585-663)||(51549363-51549441)
chr1 (425-518)||(7196934-7197027)
chr1 (462-511)||(15911932-15911981)
chr1 (425-518)||(21258917-21259010)
chr1 (597-666)||(39411595-39411662)
chr1 (469-518)||(39411626-39411674)
chr1 (441-518)||(41611255-41611332)
chr1 (537-670)||(43117261-43117394)
chr1 (426-499)||(49696907-49696980)
[»] chr7 (78 HSPs)
chr7 (421-532)||(24432330-24432441)
chr7 (423-532)||(21939283-21939392)
chr7 (427-520)||(24679065-24679158)
chr7 (429-521)||(27756267-27756359)
chr7 (535-670)||(24432342-24432476)
chr7 (428-520)||(28960649-28960739)
chr7 (562-666)||(24679044-24679148)
chr7 (427-515)||(35793375-35793463)
chr7 (426-518)||(43078026-43078118)
chr7 (537-663)||(10691311-10691438)
chr7 (588-670)||(27756271-27756353)
chr7 (537-638)||(9477365-9477466)
chr7 (422-518)||(7873504-7873600)
chr7 (421-532)||(26787875-26787986)
chr7 (537-670)||(43077976-43078111)
chr7 (426-517)||(43092004-43092095)
chr7 (536-670)||(24432569-24432702)
chr7 (588-670)||(35793381-35793463)
chr7 (430-514)||(9500128-9500213)
chr7 (589-670)||(21939301-21939382)
chr7 (534-670)||(35828355-35828492)
chr7 (534-670)||(35828582-35828719)
chr7 (421-485)||(327434-327498)
chr7 (429-525)||(9477406-9477502)
chr7 (425-521)||(30283404-30283500)
chr7 (427-518)||(10691298-10691389)
chr7 (430-532)||(9477136-9477238)
chr7 (426-532)||(35828348-35828454)
chr7 (534-667)||(10691561-10691694)
chr7 (422-515)||(35793694-35793787)
chr7 (421-518)||(46199047-46199144)
chr7 (425-485)||(282857-282917)
chr7 (426-521)||(28350115-28350210)
chr7 (441-532)||(30283674-30283765)
chr7 (441-515)||(15327716-15327789)
chr7 (426-532)||(15327953-15328058)
chr7 (430-508)||(24432628-24432705)
chr7 (462-518)||(967640-967696)
chr7 (426-518)||(7873854-7873946)
chr7 (446-518)||(10691612-10691684)
chr7 (588-664)||(15327714-15327789)
chr7 (447-515)||(47030295-47030363)
chr7 (540-670)||(9477139-9477270)
chr7 (423-518)||(26974226-26974321)
chr7 (423-518)||(29933496-29933591)
chr7 (461-532)||(43657804-43657875)
chr7 (421-519)||(6792018-6792116)
chr7 (609-670)||(9500149-9500210)
chr7 (585-670)||(28960654-28960737)
chr7 (457-518)||(42437999-42438060)
chr7 (441-510)||(44565277-44565346)
chr7 (426-499)||(46266495-46266568)
chr7 (420-521)||(48059166-48059267)
chr7 (462-518)||(20588377-20588433)
chr7 (462-518)||(40790893-40790949)
chr7 (595-663)||(44565276-44565344)
chr7 (462-518)||(45480051-45480107)
chr7 (533-568)||(282584-282619)
chr7 (440-531)||(12493531-12493621)
chr7 (427-518)||(29933190-29933281)
chr7 (540-638)||(29933450-29933549)
chr7 (604-663)||(30283707-30283766)
chr7 (427-518)||(42436829-42436920)
chr7 (464-518)||(1450365-1450419)
chr7 (534-668)||(15327917-15328049)
chr7 (424-494)||(23826269-23826339)
chr7 (604-670)||(28350122-28350188)
chr7 (447-517)||(30505105-30505175)
chr7 (588-666)||(35793694-35793772)
chr7 (421-515)||(35828637-35828731)
chr7 (427-489)||(36580274-36580336)
chr7 (586-644)||(43657819-43657877)
chr7 (533-563)||(44565520-44565550)
chr7 (585-622)||(967640-967677)
chr7 (425-514)||(21938114-21938201)
chr7 (585-670)||(26787889-26787974)
chr7 (430-499)||(34116108-34116176)
chr7 (462-511)||(43724597-43724646)
[»] chr6 (46 HSPs)
chr6 (533-655)||(1614835-1614958)
chr6 (423-532)||(2164666-2164775)
chr6 (423-532)||(2176299-2176408)
chr6 (536-670)||(2164632-2164765)
chr6 (536-670)||(2176265-2176398)
chr6 (448-532)||(1614835-1614919)
chr6 (537-666)||(1614974-1615103)
chr6 (423-532)||(12101666-12101773)
chr6 (421-518)||(12799015-12799112)
chr6 (427-514)||(30369784-30369870)
chr6 (426-532)||(9070078-9070184)
chr6 (537-670)||(12798966-12799100)
chr6 (422-515)||(2164415-2164507)
chr6 (422-515)||(2176048-2176140)
chr6 (426-518)||(2017171-2017263)
chr6 (422-518)||(4793799-4793895)
chr6 (588-652)||(12101683-12101747)
chr6 (425-517)||(13398383-13398471)
chr6 (445-521)||(1615019-1615095)
chr6 (426-499)||(12798726-12798798)
chr6 (427-511)||(11623159-11623243)
chr6 (534-670)||(12798733-12798867)
chr6 (427-518)||(11624271-11624362)
chr6 (427-518)||(28574529-28574620)
chr6 (554-670)||(9070061-9070177)
chr6 (425-521)||(10088081-10088177)
chr6 (429-532)||(499314-499416)
chr6 (421-475)||(238924-238978)
chr6 (441-499)||(12203906-12203964)
chr6 (457-518)||(29873074-29873134)
chr6 (471-532)||(30370031-30370091)
chr6 (441-518)||(33265100-33265177)
chr6 (462-518)||(1894483-1894539)
chr6 (427-499)||(2538983-2539054)
chr6 (462-518)||(12730558-12730614)
chr6 (446-518)||(29874426-29874498)
chr6 (426-489)||(12766466-12766529)
chr6 (441-496)||(22515987-22516042)
chr6 (534-632)||(30369993-30370091)
chr6 (588-670)||(2164426-2164507)
chr6 (588-670)||(2176059-2176140)
chr6 (533-571)||(7504662-7504700)
chr6 (457-499)||(10582140-10582182)
chr6 (427-497)||(15139572-15139642)
chr6 (441-518)||(2018540-2018617)
chr6 (462-499)||(2840824-2840861)
[»] scaffold0286 (4 HSPs)
scaffold0286 (423-532)||(17634-17743)
scaffold0286 (536-670)||(17644-17777)
scaffold0286 (422-515)||(17902-17994)
scaffold0286 (588-670)||(17902-17983)
[»] chr4 (73 HSPs)
chr4 (426-515)||(3369846-3369935)
chr4 (534-670)||(30626590-30626726)
chr4 (588-666)||(3369857-3369935)
chr4 (534-670)||(12690008-12690143)
chr4 (429-512)||(16322979-16323062)
chr4 (427-518)||(53831152-53831243)
chr4 (424-508)||(30627006-30627090)
chr4 (426-521)||(1096519-1096614)
chr4 (430-532)||(30626587-30626688)
chr4 (588-667)||(1096525-1096604)
chr4 (427-518)||(30064002-30064093)
chr4 (431-525)||(25423781-25423874)
chr4 (537-667)||(33641860-33641990)
chr4 (421-518)||(8143027-8143124)
chr4 (537-670)||(30064008-30064141)
chr4 (421-518)||(35830268-35830365)
chr4 (425-521)||(1095754-1095850)
chr4 (422-518)||(13388156-13388251)
chr4 (598-669)||(19914975-19915046)
chr4 (425-532)||(21552866-21552973)
chr4 (426-521)||(49804316-49804410)
chr4 (450-532)||(12690044-12690126)
chr4 (425-499)||(30064342-30064416)
chr4 (423-485)||(41148161-41148223)
chr4 (538-668)||(54953732-54953860)
chr4 (441-518)||(6033835-6033912)
chr4 (426-507)||(11787062-11787142)
chr4 (427-513)||(11787312-11787396)
chr4 (426-507)||(11799229-11799309)
chr4 (427-513)||(11799479-11799563)
chr4 (426-518)||(14816830-14816923)
chr4 (430-514)||(37831595-37831679)
chr4 (540-670)||(326838-326969)
chr4 (424-515)||(326887-326978)
chr4 (459-521)||(3901668-3901728)
chr4 (590-649)||(11787312-11787371)
chr4 (590-649)||(11799479-11799538)
chr4 (595-666)||(16322987-16323058)
chr4 (426-485)||(41148556-41148615)
chr4 (424-499)||(47742228-47742303)
chr4 (588-670)||(1095762-1095844)
chr4 (462-532)||(15845136-15845206)
chr4 (604-670)||(25423783-25423848)
chr4 (421-499)||(35393911-35393989)
chr4 (421-523)||(52865374-52865476)
chr4 (445-515)||(54953741-54953810)
chr4 (426-511)||(1186657-1186742)
chr4 (605-666)||(5303781-5303842)
chr4 (441-498)||(5303785-5303842)
chr4 (441-518)||(31761825-31761902)
chr4 (462-518)||(26858379-26858435)
chr4 (594-670)||(30627005-30627081)
chr4 (461-513)||(33122846-33122898)
chr4 (614-670)||(37831598-37831654)
chr4 (462-518)||(50073518-50073574)
chr4 (422-474)||(53578922-53578974)
chr4 (427-499)||(55038153-55038225)
chr4 (422-518)||(55318003-55318099)
chr4 (430-503)||(5234792-5234862)
chr4 (426-489)||(35383764-35383827)
chr4 (473-520)||(48188312-48188359)
chr4 (604-670)||(5547995-5548061)
chr4 (596-670)||(11787069-11787142)
chr4 (596-670)||(11799236-11799309)
chr4 (441-499)||(44271440-44271498)
chr4 (604-670)||(47742237-47742303)
chr4 (588-630)||(48188317-48188359)
chr4 (534-568)||(53578686-53578720)
chr4 (422-499)||(1139151-1139228)
chr4 (430-499)||(5547995-5548064)
chr4 (537-670)||(21552833-21552965)
chr4 (426-519)||(29697744-29697836)
chr4 (425-518)||(38828506-38828599)
[»] scaffold0092 (2 HSPs)
scaffold0092 (426-534)||(37783-37890)
scaffold0092 (585-668)||(37792-37874)
[»] chr5 (60 HSPs)
chr5 (421-530)||(38498113-38498222)
chr5 (424-518)||(6464298-6464392)
chr5 (534-670)||(6464246-6464383)
chr5 (451-532)||(36501424-36501504)
chr5 (536-668)||(22408720-22408852)
chr5 (424-518)||(36361030-36361124)
chr5 (424-493)||(20364679-20364748)
chr5 (534-670)||(20986952-20987087)
chr5 (422-521)||(11167868-11167967)
chr5 (421-520)||(12166799-12166898)
chr5 (425-532)||(20126436-20126543)
chr5 (421-532)||(22408755-22408866)
chr5 (423-518)||(38162589-38162684)
chr5 (425-515)||(20986944-20987034)
chr5 (588-670)||(38498125-38498207)
chr5 (538-670)||(12166811-12166944)
chr5 (424-520)||(12167085-12167181)
chr5 (429-501)||(37426694-37426765)
chr5 (534-667)||(36361042-36361175)
chr5 (421-518)||(20126641-20126740)
chr5 (610-670)||(20364688-20364748)
chr5 (441-521)||(34969117-34969197)
chr5 (602-670)||(37426694-37426761)
chr5 (425-485)||(42585984-42586044)
chr5 (465-532)||(28769751-28769818)
chr5 (451-518)||(36628649-36628716)
chr5 (540-670)||(11167879-11168008)
chr5 (426-499)||(128253-128326)
chr5 (422-481)||(2974894-2974953)
chr5 (585-652)||(36628649-36628716)
chr5 (607-670)||(38944178-38944241)
chr5 (430-532)||(33087810-33087912)
chr5 (424-489)||(35166544-35166610)
chr5 (602-652)||(36501424-36501474)
chr5 (441-518)||(26366048-26366124)
chr5 (540-641)||(28769748-28769849)
chr5 (426-519)||(36798398-36798491)
chr5 (618-663)||(38498261-38498306)
chr5 (462-518)||(4146142-4146198)
chr5 (537-632)||(6463983-6464079)
chr5 (428-496)||(38944178-38944246)
chr5 (457-532)||(42169374-42169450)
chr5 (430-489)||(3333695-3333754)
chr5 (424-519)||(12406038-12406133)
chr5 (462-509)||(16039732-16039779)
chr5 (424-475)||(20369397-20369448)
chr5 (533-656)||(36501697-36501820)
chr5 (427-518)||(37060120-37060211)
chr5 (459-518)||(38163638-38163697)
chr5 (441-484)||(38498262-38498305)
chr5 (430-532)||(42169087-42169190)
chr5 (426-485)||(42586343-42586402)
chr5 (541-670)||(20126444-20126574)
chr5 (436-489)||(36898642-36898696)
chr5 (462-499)||(10169050-10169087)
chr5 (540-632)||(11168130-11168223)
chr5 (430-499)||(13428120-13428188)
chr5 (429-494)||(33087582-33087647)
chr5 (609-670)||(33087586-33087647)
chr5 (588-665)||(37426423-37426500)
[»] chr2 (71 HSPs)
chr2 (423-512)||(23993888-23993977)
chr2 (421-532)||(35500300-35500411)
chr2 (425-518)||(14816020-14816113)
chr2 (536-670)||(31226857-31226991)
chr2 (427-518)||(14815698-14815789)
chr2 (426-520)||(14289265-14289358)
chr2 (585-670)||(31227111-31227196)
chr2 (430-518)||(31227111-31227199)
chr2 (547-654)||(14289287-14289394)
chr2 (426-525)||(35500039-35500138)
chr2 (422-508)||(10522638-10522724)
chr2 (535-636)||(13491728-13491829)
chr2 (430-532)||(29370719-29370821)
chr2 (537-670)||(14815704-14815837)
chr2 (426-519)||(14983922-14984015)
chr2 (597-670)||(23993894-23993967)
chr2 (431-532)||(31226855-31226956)
chr2 (426-518)||(23993722-23993813)
chr2 (537-670)||(35500264-35500399)
chr2 (422-492)||(20650365-20650435)
chr2 (540-670)||(35500046-35500176)
chr2 (421-518)||(11363876-11363973)
chr2 (426-499)||(12802446-12802519)
chr2 (467-520)||(13491776-13491829)
chr2 (537-670)||(29370722-29370855)
chr2 (588-670)||(3403517-3403599)
chr2 (426-515)||(3403510-3403599)
chr2 (585-670)||(14816020-14816105)
chr2 (585-670)||(23993729-23993813)
chr2 (441-518)||(28719331-28719408)
chr2 (425-514)||(35124591-35124679)
chr2 (426-518)||(9780908-9781000)
chr2 (422-518)||(21633290-21633386)
chr2 (462-518)||(35180508-35180564)
chr2 (426-518)||(36286376-36286468)
chr2 (462-518)||(37343687-37343743)
chr2 (426-485)||(8030125-8030184)
chr2 (422-489)||(14489463-14489529)
chr2 (428-499)||(17850476-17850547)
chr2 (611-670)||(20650376-20650435)
chr2 (427-518)||(32661657-32661748)
chr2 (429-508)||(35125156-35125234)
chr2 (422-497)||(44078533-44078608)
chr2 (425-499)||(52281-52355)
chr2 (427-489)||(15023090-15023152)
chr2 (425-499)||(39672663-39672736)
chr2 (421-518)||(23048284-23048381)
chr2 (441-518)||(23049787-23049864)
chr2 (589-670)||(37431765-37431845)
chr2 (427-475)||(4856709-4856757)
chr2 (462-518)||(12542379-12542435)
chr2 (462-518)||(16238147-16238203)
chr2 (421-489)||(34679342-34679410)
chr2 (594-666)||(35125155-35125226)
chr2 (462-518)||(35173036-35173092)
chr2 (462-517)||(11188341-11188396)
chr2 (426-521)||(13491478-13491571)
chr2 (537-670)||(17850407-17850542)
chr2 (428-483)||(20662516-20662571)
chr2 (423-494)||(21631814-21631885)
chr2 (426-489)||(36177343-36177405)
chr2 (457-508)||(43741734-43741785)
chr2 (426-489)||(44617989-44618052)
chr2 (534-568)||(8030203-8030237)
chr2 (427-509)||(10857339-10857421)
chr2 (424-518)||(23280853-23280947)
chr2 (427-489)||(36176981-36177043)
chr2 (441-499)||(43890114-43890172)
chr2 (457-518)||(16143697-16143757)
chr2 (462-519)||(19885893-19885950)
chr2 (457-518)||(44077100-44077161)
[»] chr8 (80 HSPs)
chr8 (421-532)||(45522400-45522511)
chr8 (427-532)||(4694964-4695069)
chr8 (426-520)||(5899500-5899594)
chr8 (533-670)||(34232764-34232900)
chr8 (423-500)||(9498905-9498982)
chr8 (534-666)||(29219086-29219219)
chr8 (429-515)||(5899211-5899298)
chr8 (538-666)||(5899456-5899583)
chr8 (426-521)||(8409785-8409879)
chr8 (441-532)||(29219090-29219181)
chr8 (424-514)||(2044672-2044761)
chr8 (533-670)||(18929308-18929445)
chr8 (429-515)||(29219349-29219435)
chr8 (533-666)||(9498919-9499051)
chr8 (534-663)||(45163632-45163761)
chr8 (441-518)||(45163683-45163760)
chr8 (538-668)||(4694930-4695061)
chr8 (534-670)||(9499130-9499265)
chr8 (425-517)||(18929300-18929392)
chr8 (426-518)||(35795554-35795646)
chr8 (588-666)||(5899219-5899298)
chr8 (426-521)||(9234700-9234795)
chr8 (429-532)||(9499167-9499269)
chr8 (423-518)||(17512093-17512188)
chr8 (427-518)||(45308454-45308545)
chr8 (421-499)||(29919069-29919146)
chr8 (589-670)||(2044681-2044761)
chr8 (441-518)||(23936293-23936370)
chr8 (423-532)||(29196571-29196680)
chr8 (430-532)||(29340771-29340877)
chr8 (426-518)||(23475623-23475715)
chr8 (426-485)||(755902-755961)
chr8 (421-520)||(34232752-34232849)
chr8 (537-668)||(45522367-45522497)
chr8 (426-480)||(11289307-11289361)
chr8 (588-670)||(29219349-29219431)
chr8 (441-518)||(12278849-12278926)
chr8 (424-521)||(41602831-41602928)
chr8 (589-670)||(41602838-41602919)
chr8 (421-485)||(2802642-2802706)
chr8 (428-520)||(16907240-16907332)
chr8 (540-667)||(17512106-17512234)
chr8 (416-475)||(26889282-26889341)
chr8 (421-499)||(1003787-1003864)
chr8 (426-532)||(14170421-14170527)
chr8 (604-670)||(29919081-29919146)
chr8 (537-667)||(35795506-35795636)
chr8 (478-532)||(45522188-45522242)
chr8 (458-499)||(5645767-5645808)
chr8 (441-518)||(5916879-5916956)
chr8 (423-476)||(18092907-18092960)
chr8 (421-518)||(45309544-45309641)
chr8 (425-485)||(756113-756173)
chr8 (429-485)||(4461676-4461732)
chr8 (462-518)||(7658814-7658870)
chr8 (425-513)||(16982624-16982712)
chr8 (614-670)||(18092917-18092973)
chr8 (421-489)||(20853372-20853440)
chr8 (614-670)||(27545607-27545663)
chr8 (429-517)||(35795219-35795307)
chr8 (462-518)||(44807297-44807353)
chr8 (450-517)||(2044947-2045012)
chr8 (462-517)||(7477372-7477427)
chr8 (575-670)||(16907245-16907340)
chr8 (426-489)||(17070906-17070969)
chr8 (426-489)||(17577303-17577366)
chr8 (612-667)||(18896616-18896671)
chr8 (430-489)||(27545607-27545666)
chr8 (463-518)||(41368387-41368442)
chr8 (534-568)||(4461783-4461817)
chr8 (428-525)||(10427395-10427491)
chr8 (441-511)||(18650945-18651014)
chr8 (604-670)||(29340774-29340840)
chr8 (422-475)||(6041084-6041137)
chr8 (422-475)||(6044716-6044769)
chr8 (426-499)||(8409486-8409558)
chr8 (585-670)||(9234703-9234788)
chr8 (421-518)||(18621715-18621812)
chr8 (425-518)||(31947852-31947945)
chr8 (426-519)||(41487199-41487292)
[»] scaffold0010 (2 HSPs)
scaffold0010 (423-525)||(128131-128233)
scaffold0010 (588-670)||(128141-128223)
[»] scaffold0172 (4 HSPs)
scaffold0172 (427-525)||(9853-9950)
scaffold0172 (540-670)||(9815-9944)
scaffold0172 (430-521)||(9548-9639)
scaffold0172 (587-638)||(9583-9634)
[»] scaffold0006 (4 HSPs)
scaffold0006 (533-670)||(162215-162351)
scaffold0006 (429-518)||(162266-162355)
scaffold0006 (447-518)||(161732-161803)
scaffold0006 (585-656)||(161732-161803)
[»] scaffold0025 (2 HSPs)
scaffold0025 (429-532)||(151574-151676)
scaffold0025 (534-667)||(151537-151669)
[»] scaffold1088 (3 HSPs)
scaffold1088 (462-515)||(2096-2149)
scaffold1088 (588-638)||(2096-2146)
scaffold1088 (420-489)||(2012-2081)
[»] scaffold0725 (1 HSPs)
scaffold0725 (422-480)||(6692-6750)
[»] scaffold0005 (1 HSPs)
scaffold0005 (426-518)||(22788-22881)
[»] scaffold0468 (2 HSPs)
scaffold0468 (422-518)||(10346-10442)
scaffold0468 (585-670)||(10357-10442)
[»] scaffold0047 (2 HSPs)
scaffold0047 (462-518)||(63286-63342)
scaffold0047 (462-499)||(63070-63107)
[»] scaffold0854 (2 HSPs)
scaffold0854 (428-518)||(1844-1934)
scaffold0854 (428-518)||(3350-3440)
[»] scaffold0016 (2 HSPs)
scaffold0016 (424-518)||(199663-199759)
scaffold0016 (421-518)||(201216-201313)
[»] scaffold0019 (1 HSPs)
scaffold0019 (426-518)||(122552-122644)
[»] scaffold0028 (2 HSPs)
scaffold0028 (427-518)||(31979-32070)
scaffold0028 (441-511)||(32239-32309)
[»] scaffold1458 (1 HSPs)
scaffold1458 (425-499)||(1469-1543)
[»] scaffold0515 (1 HSPs)
scaffold0515 (425-499)||(3637-3711)
[»] scaffold0306 (1 HSPs)
scaffold0306 (425-499)||(3637-3711)
[»] scaffold0001 (1 HSPs)
scaffold0001 (425-499)||(405436-405509)
[»] scaffold0400 (1 HSPs)
scaffold0400 (471-532)||(8581-8642)
[»] scaffold0365 (1 HSPs)
scaffold0365 (471-532)||(9224-9285)
[»] scaffold0062 (2 HSPs)
scaffold0062 (426-519)||(46075-46168)
scaffold0062 (604-673)||(46079-46148)


Alignment Details
Target: chr3 (Bit Score: 754; Significance: 0; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 754; E-Value: 0
Query Start/End: Original strand, 30 - 817
Target Start/End: Complemental strand, 3355396 - 3354607
Alignment:
Q  30 gaaggtggttccacaagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3355396 gaaggtggttccacaagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaa 3355297  T
Q  130 gatggacaatgccattggattatcaagcatattccccttgtactaatccgtcagaaagtaggatcgggattttatgactatgacttgcaccgcattccta 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3355296 gatggacaatgccattggattatcaagcatattccccttgtactaatccgtcagaaagtaggattgggattttatgactatgacttgcaccgcattccta 3355197  T
Q  230 ctacatccaatgtctgaatcatcaaggtactcactctttcctcataccatgaattgtttctcttatgaatgtttgaaataacatttcctcatttaaggtt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3355196 ctacatccaatgtctgaatcatcaaggtactcactctttcctcataccatgaattgtttctcttatgaatgtttgaaataacatttcctcatttaaggtt 3355097  T
Q  330 tcaaacttccctttacatgaatgtttgcatctttttgatttaagtaaaactatacttaatgcatgcacaataagaaaagtaatcttataactttttaggc 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3355096 tcaaacttccctttacatgaatgtttgcatctttttgatttaagtaaaactatacttaatgcatgcacaataagaaaagtaatcttataactttttaggc 3354997  T
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgca 529  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3354996 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattttgca 3354897  T
Q  530 gttatcagcattgacttggtcaaaattggcctgg-ggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggcc 628  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3354896 gttatcagcattgacttggtcaaaattggcctgggggggcaaagcagcaaaattggcaatacttaaggggctggattgtattttattttcttaggaggcc 3354797  T
Q  629 aaaatcgcaatttcctgatacttagggggccaaaactgctataaatttacaactcccctctacatatattgaatgaaagtggctatattctcatcatgca 728  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3354796 aaaatcgcaatttcctgatacttagggggccaaaactgctataaatttacaactcccctctacatatattgaatgaaagtggctatattctcatcatgca 3354697  T
Q  729 tgtttatgcatgtcta-gtgaacagattcaaattcttcatgttgctgctcaagagaagatgcactttgtctctttattccttctgtggtg 817  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3354696 tgtttatgcatggctaggtgaacagattcaaattcttcatgttgctgctcaagagaagatgcactttgtctctttattccttctatggtg 3354607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 34 - 314
Target Start/End: Original strand, 3723573 - 3723852
Alignment:
Q  34 gtggttccacaagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaagatg 133  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| | ||||||||    
T  3723573 gtggttccacaagacctcaaacacttgaaaaaccttcaattccttggatttgctgatatgccacatgaactagttgaaagcattgatcctgcaaaagatg 3723672  T
Q  134 gacaatgccattggattatcaagcatattccccttgtactaatccgtcagaaagtaggatcgggattttatgactatgacttgcaccgcattcctactac 233  Q
    || ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||| |||||||||||    
T  3723673 gaaaatgccattggattatcaatcatattccccgtgtactaatccgtcagaaagtaggattgggattttataac-atgacttgcaccgtattcctactac 3723771  T
Q  234 atccaatgtctgaatcatcaaggtactcactctttcctcataccatgaattgtttctcttatgaatgtttgaaataacatt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  3723772 atccaatgtctgaatcatcaaggtactcactctttcctcataccatgaattgtttctcttataaatgtttgaaattacatt 3723852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 30 - 261
Target Start/End: Complemental strand, 3219501 - 3219270
Alignment:
Q  30 gaaggtggttccacaagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaa 129  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||   |||    
T  3219501 gaaggtggttccacaagaccttaaacacttggaaaaccttcaattccttggatttgctgatatgccacctgaattggttgaaagcattgatccacgcaaa 3219402  T
Q  130 gatggacaatgccattggattatcaagcatattccccttgtactaatccgtcagaaagtaggatcgggattttatgactatgacttgcaccgcattccta 229  Q
    | |||| ||| |||||   | |||||||||||||| || ||||| || ||||||||||| |||||  ||||| |||||||||| ||| |||  |||||||    
T  3219401 ggtggagaattccattcagtaatcaagcatattcctctagtactcattcgtcagaaagtcggatcaagatttcatgactatgagttgtaccctattccta 3219302  T
Q  230 ctacatccaatgtctgaatcatcaaggtactc 261  Q
    ||  ||||||||||||||  ||||||||||||    
T  3219301 ctctatccaatgtctgaaatatcaaggtactc 3219270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 695 - 810
Target Start/End: Original strand, 3724063 - 3724179
Alignment:
Q  695 tattgaatgaaagtggctatattctcatcatgcatgtttatgcatgtctag-tgaacagattcaaattcttcatgttgctgctcaagagaagatgcactt 793  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3724063 tattgaatgaaagtggctatattctcatcatgcatgtttgtgcaagtcttgctgaacagattcaaattcttcatgttgctgctcaagagaagatgcactt 3724162  T
Q  794 tgtctctttattccttc 810  Q
    |||||||||||||||||    
T  3724163 tgtctctttattccttc 3724179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 3196398 - 3196234
Alignment:
Q  30 gaaggtggttccacaagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaa 129  Q
    ||||||| | || ||||| |||||| |||||||||||||||||||||||||||||||||||||||||   ||||| ||||| |||||||||| ||| |||    
T  3196398 gaaggtgttaccccaagaacttcaaaacttgaaaaaccttcaattccttggatttgctgatatgccagttgaattagttgatagcattgatcgagagaaa 3196299  T
Q  130 gatggacaatgccattggattatcaagcatattccccttgtactaatccgtcagaaagtaggatc 194  Q
    || |||  |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  3196298 gacggagcatgccattggattatcaatcatattccccttgtactaattcgtgagaaagtaggatc 3196234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 46 - 261
Target Start/End: Original strand, 3215671 - 3215886
Alignment:
Q  46 gaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaagatggacaatgccatt 145  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||    ||||| ||||| |||||||||||||| |||| ||||  ||||| ||    
T  3215671 gacctccaaaacttgaaaaaccttcaattccttggatttgctgaaatgcctgttgaattagttgatagcattgatccagagaaaggtggaacatgccgtt 3215770  T
Q  146 ggattatcaagcatattccccttgtactaatccgtcagaaagtaggatcgggattttatgactatgacttgcaccgcattcctactacatccaatgtctg 245  Q
    |||||||||| |||||||||||||||| ||| |||||||| ||||||||   |||| ||||||||   ||||||||||||||||||| |  ||| |||||    
T  3215771 ggattatcaatcatattccccttgtacaaattcgtcagaatgtaggatcaaaatttcatgactatatgttgcaccgcattcctactaaaatcaaagtctg 3215870  T
Q  246 aatcatcaaggtactc 261  Q
    ||  ||||||||||||    
T  3215871 aaatatcaaggtactc 3215886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 317 - 426
Target Start/End: Original strand, 3723899 - 3724009
Alignment:
Q  317 ctcatttaaggtttcaaacttccctttacatgaatgtttgcatctttttgatttaagtaaaactatactt-aatgcatgcacaataagaaaagtaatctt 415  Q
    ||||||||| |  ||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  3723899 ctcatttaatgcatcaaacttctcttcaaatgaatgtttgcatcttcttgatttaagtaaaactatacttaaatgcatgcacaataagaaaagtaatcat 3723998  T
Q  416 ataacttttta 426  Q
    |||||||||||    
T  3723999 ataacttttta 3724009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 3308660 - 3308496
Alignment:
Q  30 gaaggtggttccacaagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaa 129  Q
    |||||| || ||| ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||   ||| | ||||| ||||||||||| || |||    
T  3308660 gaaggttgtaccagaagacctccaaaacttgaaaaaccttcaattccttggatttgctgaaatgccagttgaactagttgatagcattgatcctgagaaa 3308561  T
Q  130 gatggacaatgccattggattatcaagcatattccccttgtactaatccgtcagaaagtaggatc 194  Q
    | ||||   | ||||  ||||||||| |||||||||||||||| ||| |||||||| ||||||||    
T  3308560 ggtggagtgtaccatcagattatcaatcatattccccttgtacgaattcgtcagaatgtaggatc 3308496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 3203054 - 3203180
Alignment:
Q  44 aagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaagatggacaatgcca 143  Q
    ||||||| ||| || ||||||||||||| ||||||||||||||||||||||||     ||| ||||| |||||| ||||||| |||| ||||| ||||||    
T  3203054 aagacctccaaaacctgaaaaaccttcagttccttggatttgctgatatgccagctacattagttgatagcattaatccagagaaaggtggaccatgcca 3203153  T
Q  144 ttggattatcaagcatattccccttgt 170  Q
    |||||||||||| ||||||||||||||    
T  3203154 ttggattatcaatcatattccccttgt 3203180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 3301962 - 3301820
Alignment:
Q  43 caagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatccagaaaaagatggacaatgcc 142  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||   ||||| ||||| ||||||||||| || |||| ||||     ||    
T  3301962 caagacctccaaaacttgaaaaaccttcaattccttggatttgctgaaatgccagttgaattagttgatagcattgatcctgagaaaggtggagcgcacc 3301863  T
Q  143 attggattatcaagcatattccccttgtactaatccgtcagaa 185  Q
    || |||||||||| |||||||||||||||| ||| ||||||||    
T  3301862 atcggattatcaatcatattccccttgtacaaattcgtcagaa 3301820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 426 - 532
Target Start/End: Complemental strand, 50420936 - 50420830
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||||||||||| ||||||| ||||||||| | |||||||||||||||  ||| ||||||||||||| |||||| ||||| |||||||||||||||||    
T  50420936 aggcttaatagcagttttggcctcctaagtattatgaagttgcgattttgaccccttaacaaaataaaacacaatctagccctctaagtattgcccattt 50420837  T
Q  526 cgcagtt 532  Q
     ||||||    
T  50420836 tgcagtt 50420830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 3354755 - 3354847
Alignment:
Q  433 atagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  3354755 atagcagttttggccccctaagtatcaggaaattgcgattttggcctcctaagaaaataaaatacaatccagccccttaagtattgccaattt 3354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 575 - 670
Target Start/End: Original strand, 3354898 - 3354993
Alignment:
Q  575 gcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||| | ||||||||| ||||||||||||||||||||||| ||||| | |||||||||||| ||| ||||||||||||||||||| |||||||    
T  3354898 gcaaaatgggcaatacttagggggctggattgtattttattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctat 3354993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 425 - 532
Target Start/End: Complemental strand, 16883850 - 16883743
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatt 524  Q
    |||||||||||| |  |||||||||||||||||||  ||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||| | ||    
T  16883850 taggcttaatagtatttttggccccctaagtatcagaaagttgcgattttgaccccctaacaaattaaaatacaatccagccccctaagtactgctcctt 16883751  T
Q  525 tcgcagtt 532  Q
    | ||||||    
T  16883750 ttgcagtt 16883743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 44 - 261
Target Start/End: Complemental strand, 3300253 - 3300035
Alignment:
Q  44 aagaccttcaacacttgaaaaaccttcaattccttggatttgctgatatgccacaggaattggttgaaagcattgatc-cagaaaaagatggacaatgcc 142  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||||| ||||||  |||||| ||||| || ||||||| | || |||| ||||     ||    
T  3300253 aagacctccaaaactcgaaaaaccttcaattccttggatttgctgaaatgccagtggaattagttgatagtattgatcactgagaaaggtggaaggcacc 3300154  T
Q  143 attggattatcaagcatattccccttgtactaatccgtcagaaagtaggatcgggattttatgactatgacttgcaccgcattcctactacatccaatgt 242  Q
    | || |||||||| |||||||||||||||| ||| | |||||| ||||||||  ||||| |||||| |   ||||||||||||||||||  |  ||||||    
T  3300153 actgtattatcaatcatattccccttgtacaaattcatcagaatgtaggatcaagatttcatgactttatgttgcaccgcattcctactcaaatcaatgt 3300054  T
Q  243 ctgaatcatcaaggtactc 261  Q
     ||||  ||||||||||||    
T  3300053 ttgaaatatcaaggtactc 3300035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 441 - 515
Target Start/End: Original strand, 33687618 - 33687692
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  33687618 tttggccccctaagtatcagaaagttgcgattttagccccctaacaaaataaaatacaatccagccccctaagta 33687692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 426 - 532
Target Start/End: Original strand, 43902531 - 43902636
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||||||||||| |||| |||| ||||||| | ||||||| |||||||| ||| |||||||||||||||||||| | ||||||||||||||||| |||    
T  43902531 aggcttaatagcag-tttgaccccttaagtattaggaagttgtgattttggccccttaacaaaataaaatacaatctaaccccctaagtattgccccttt 43902629  T
Q  526 cgcagtt 532  Q
     ||||||    
T  43902630 tgcagtt 43902636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 17258246 - 17258153
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| |||  |||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| ||||||    
T  17258246 taggcttaattgcacttttggccccctatgtttcaagaagttgcgattttggacccctaacaaattaaaatacaaaacagccccctatgtattg 17258153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 525
Target Start/End: Original strand, 33381507 - 33381608
Alignment:
Q  425 taggcttaatagcagatttggcccc-ctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccat 523  Q
    ||||||||||||||| | ||||||| |||||||| | |||||||| ||||||  ||| ||||||||||||||||||| |||| |||||||||||||||||    
T  33381507 taggcttaatagcagttatggcccccctaagtattaggaagttgcaattttgaccccttaacaaaataaaatacaattcagctccctaagtattgcccat 33381606  T
Q  524 tt 525  Q
    ||    
T  33381607 tt 33381608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 588 - 669
Target Start/End: Complemental strand, 33687692 - 33687611
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgcta 669  Q
    |||||| ||||||||||||||||||||||| ||||| ||| |||||||||| || ||||||||||||||||||||| |||||    
T  33687692 tacttagggggctggattgtattttattttgttagggggctaaaatcgcaactttctgatacttagggggccaaaaatgcta 33687611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 670
Target Start/End: Original strand, 33687885 - 33688022
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||||||| |||||||||||||| ||||||| | ||| | ||||||  | || |||||| ||||||| ||||||||||||||| ||||| || || ||    
T  33687885 tcagcattgatttggtcaaaattggtctgggggaccaaaactgcaaaagaggcagtacttagggggctgaattgtattttattttgttagggggtcagaa 33687984  T
Q  633 tcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| || ||||||||||| | ||||||||||||||    
T  33687985 tcgcaactttctgatacttagagagccaaaactgctat 33688022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 427 - 520
Target Start/End: Complemental strand, 33688028 - 33687935
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||||||||||| |||||| | ||||||||||  ||||||||||| ||  ||||||||||||||||||||||| |||||||||||||| ||||    
T  33688028 ggcttaatagcagttttggctctctaagtatcagaaagttgcgattctgaccccctaacaaaataaaatacaattcagccccctaagtactgcc 33687935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 422 - 506
Target Start/End: Complemental strand, 49579231 - 49579147
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcc 506  Q
    ||||| |||||||||||| |||| |||| |||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||    
T  49579231 ttttatgcttaatagcagttttgaccccttaagtatcagaaagttgcgattttagtcccctaacaaaataaaatacaattcagcc 49579147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 534 - 670
Target Start/End: Original strand, 50420794 - 50420929
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    |||||||||| ||||||||||||| |||||||  |||| | ||||||| | |||||||||  ||||| |||||| ||||||||| ||| | || ||||||    
T  50420794 tcagcattgatttggtcaaaattgacctggggc-caaaactgcaaaatgggcaatacttagagggctagattgtgttttattttgttaaggggtcaaaat 50420892  T
Q  634 cgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| ||| | ||||||||| |||||||||||||||    
T  50420893 cgcaacttcataatacttaggaggccaaaactgctat 50420929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 745 - 817
Target Start/End: Original strand, 3216463 - 3216535
Alignment:
Q  745 gtgaacagattcaaattcttcatgttgctgctcaagagaagatgcactttgtctctttattccttctgtggtg 817  Q
    ||||||||||||||||||| |||| |||||||||  ||||||||||||||||||||| ||||||||| |||||    
T  3216463 gtgaacagattcaaattctccatgctgctgctcacaagaagatgcactttgtctcttcattccttctttggtg 3216535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 588 - 663
Target Start/End: Original strand, 16883760 - 16883835
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 663  Q
    |||||| ||||||||||||||||||| ||| ||||| || ||||||||||| || |||||||||||||||||||||    
T  16883760 tacttagggggctggattgtattttaatttgttagggggtcaaaatcgcaactttctgatacttagggggccaaaa 16883835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 541 - 666
Target Start/End: Original strand, 1429466 - 1429591
Alignment:
Q  541 tgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatt 640  Q
    |||||||||||||||| ||  ||||| |||| | ||||||| ||  ||||||| | |||||||||||| ||  |||||||||||||||||||||| || |    
T  1429466 tgacttggtcaaaatttgcaagggggtcaaaactgcaaaatggcttatacttaggaggctggattgtaattgtttttcttaggaggccaaaatcgtaagt 1429565  T
Q  641 tcctgatacttagggggccaaaactg 666  Q
    || |||| ||||| ||| ||||||||    
T  1429566 tcatgatgcttagagggtcaaaactg 1429591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 670
Target Start/End: Complemental strand, 33381652 - 33381515
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    |||||||||||||| | ||||||| |||| ||| |||| | | ||||| | ||||||||| || |||| ||||||||||||||| ||| | || ||||||    
T  33381652 tcagcattgacttgattaaaattgacctgagggccaaaactgtaaaatgggcaatacttagggagctgaattgtattttattttgttaaggggtcaaaat 33381553  T
Q  634 cgcaatttcctgatacttag-ggggccaaaactgctat 670  Q
     |||| ||||| |||||||| ||||||| |||||||||    
T  33381552 tgcaacttcctaatacttaggggggccataactgctat 33381515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 53255340 - 53255247
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| ||||||| |||| || | |||||||||||||||||| |||||||| ||||||| |||||  | |||| ||||||||||    
T  53255340 taggcttaatagcagttttggcctcctatgttttaagaagttgcgattttggccccctaactaaataaactacaaaaccgccctctaagtattg 53255247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 518
Target Start/End: Original strand, 40988597 - 40988689
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||  |||||| ||||| || ||||||||||||||||||||||||||||| || ||||||||||  || ||||||| ||||||    
T  40988597 aggcttaattgcacttttggctccctatgtttcaagaagttgcgattttggtcccctaactaattaaaatacaaaacaaccccctatgtattg 40988689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 662
Target Start/End: Complemental strand, 43902672 - 43902545
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    |||||||||||||| |||||||||| || |||| |||| | ||||||  | ||||||||| |||| | |||||||||||||||| ||| | |||||||||    
T  43902672 tcagcattgacttgatcaaaattggtctcgggg-caaaactgcaaaaggggcaatacttagggggttagattgtattttattttgttaaggggccaaaat 43902574  T
Q  634 cgcaatttcctgatacttagggggccaaa 662  Q
    | ||| ||||| ||||||| |||| ||||    
T  43902573 cacaacttcctaatacttaaggggtcaaa 43902545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 2181315 - 2181406
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  |||||||||||| || |||||||||||||||||||| |||||||| || ||||||||||  || ||||||| ||||||    
T  2181315 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttggacccctaacgaattaaaatacaaaacatccccctatgtattg 2181406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 424 - 518
Target Start/End: Complemental strand, 49002818 - 49002724
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| |||  |||||||| |||| | |||||||||||||||||||| |||||||| || ||||||||||  || ||||||| ||||||    
T  49002818 ttaggcttaattgcacttttggccctctaattttcaagaagttgcgattttggacccctaactaattaaaatacaaaacacccccctatgtattg 49002724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 518
Target Start/End: Original strand, 51224940 - 51225017
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||| |||| || |||||||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  51224940 tttggcctcctatgtttcaagaagttgcgattttggccccctaactaattaaaatacaaaacagccccctacgtattg 51225017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 54476037 - 54476134
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||| |||  ||||||||||||  | | |||||||||||||||||  |||||||| || ||||||||||  |||||||||| ||||||    
T  54476037 tttttaggcttaattgcacttttggccccctatattttaagaagttgcgattttgaccccctaactaattaaaatacaaaacagccccctatgtattg 54476134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 427 - 499
Target Start/End: Original strand, 53254963 - 53255035
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||| ||| |||||||||||| || |||||||||||||||||||| || ||||| ||||||| |||||    
T  53254963 ggcttaataacagttttggccccctatgtttcaagaagttgcgattttggccctctaactaaataaactacaa 53255035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 425 - 512
Target Start/End: Complemental strand, 33944925 - 33944838
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaa 512  Q
    |||||||||| |||  |||||||| ||| || |||||||||||||||||||  |||||||| || ||||||||||  |||||||||||    
T  33944925 taggcttaattgcacttttggccctctatgtttcaagaagttgcgattttgaacccctaactaattaaaatacaaaacagccccctaa 33944838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 500
Target Start/End: Original strand, 15311838 - 15311911
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaat 500  Q
    |||||||||||||| ||||  || |||||||| | |||||||| ||||||| |||||||||||||||||||||||    
T  15311838 aggcttaatagcagttttgatcctctaagtattatgaagttgcaattttgg-cccctaacaaaataaaatacaat 15311911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 507
Target Start/End: Original strand, 16883493 - 16883571
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccc 507  Q
    ||||||| ||| |||| |||||||||||||| ||||||| |||||||  || |||||||||||||||| ||| ||||||    
T  16883493 cttaataacagttttgaccccctaagtatcaggaagttgtgattttgaccctctaacaaaataaaatataattcagccc 16883571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 441 - 499
Target Start/End: Complemental strand, 32772080 - 32772022
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||||    
T  32772080 tttggccccctatgtttcaagaagttgtgattttggtcccctaactaattaaaatacaa 32772022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 519
Target Start/End: Complemental strand, 51315804 - 51315706
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    ||||||||||||||||||| ||| ||||||||| | ||   ||||||||||||||| ||||||| |||| ||| |||||  | ||||||||||| ||||    
T  51315804 tttttaggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgc 51315706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 459 - 496
Target Start/End: Complemental strand, 1807682 - 1807645
Alignment:
Q  459 aagaagttgcgattttggtcccctaacaaaataaaata 496  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1807682 aagaagttgcgattttggtcccctaacaaaataaaata 1807645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 10732447 - 10732370
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| || || |||||||||||||||||| | |||||||| || ||||||||||  |||||||||| ||||||    
T  10732447 tttggccccttatgtttcaagaagttgcgattttcgacccctaactaattaaaatacaaaacagccccctatgtattg 10732370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 518
Target Start/End: Original strand, 17256582 - 17256659
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||  | |||||||||||| ||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  17256582 tttggccccctatatttcaagaagttgcaattttggccccctaactaattaaaatacaaaacagccccctatgtattg 17256659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 534 - 667
Target Start/End: Original strand, 37755110 - 37755242
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||| |||||||||||||||||||| |||||  |||| | ||||||  |  |||||||||||||| |  || || |||||||  ||||| ||| |||||    
T  37755110 tcagctttgacttggtcaaaattggcatggggc-caaaactgcaaaaaagttaatacttaaggggcggttttatagtttatttagttagggggctaaaat 37755208  T
Q  634 cgcaatttcctgatacttagggggccaaaactgc 667  Q
    ||||| ||| ||| || |||||||||||||||||    
T  37755209 cgcaacttcatgaaacatagggggccaaaactgc 37755242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 49579147 - 49579220
Alignment:
Q  597 ggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| ||||||||||||||| ||||| | | |||||||||| || |||||||||| |||| ||||||||||||    
T  49579147 ggctgaattgtattttattttgttaggggactaaaatcgcaactttctgatacttaaggggtcaaaactgctat 49579220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 534 - 666
Target Start/End: Complemental strand, 53255105 - 53254973
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    ||||| ||||||||||||||||||||||| || || ||| | ||||||  | ||||||||| ||||| |  ||||| |||||||  ||||  ||||||||    
T  53255105 tcagctttgacttggtcaaaattggcctgaggagccaaaactgcaaaaaagtcaatactta-ggggcggttttgtagtttatttagttagagggccaaaa 53255007  T
Q  633 tcgcaatttcctgatacttagggggccaaaactg 666  Q
    |||||| ||| ||| || ||||||||||||||||    
T  53255006 tcgcaacttcttgaaacatagggggccaaaactg 53254973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 55228106 - 55228029
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||  | | |||||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  55228106 tttggccccctatattttaagaagttgcgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 55228029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 663
Target Start/End: Complemental strand, 26466104 - 26465980
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttctta-ggaggccaaaatcgcaa 638  Q
    ||||||||||||||||| ||||| | | |||| | ||||||  | ||| |  |||||||||| ||||||||||||||| ||| || ||||||||||||||    
T  26466104 ttgacttggtcaaaattagcctgcgagccaaaactgcaaaaggggcaaaatctaaggggctgaattgtattttattttgttaggggggccaaaatcgcaa 26466005  T
Q  639 tttcctgatacttagggggccaaaa 663  Q
     ||| | |||||||| ||| |||||    
T  26466004 cttcataatacttagtgggtcaaaa 26465980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 508
Target Start/End: Original strand, 26465981 - 26466049
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccc-taacaaaataaaatacaatccagcccc 508  Q
    |||| ||| |||||||| | |||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  26465981 tttgacccactaagtattatgaagttgcgattttggcccccctaacaaaataaaatacaattcagcccc 26466049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 518
Target Start/End: Complemental strand, 43902829 - 43902789
Alignment:
Q  478 cccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  43902829 cccctaacaaaataaaatacaatctagccccctaagtattg 43902789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 47284570 - 47284514
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||||||| || ||||||||||  |||||||||| ||||||    
T  47284570 aagttgcgattttggtcccctaactaattaaaatacaaaacagccccctatgtattg 47284514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 427 - 518
Target Start/End: Complemental strand, 35495261 - 35495171
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  ||||||||| ||  | ||||||||||||||||||||| ||||||| || ||||||||||  |||||||||| ||||||    
T  35495261 ggcttaattgcacttttggccccttatatttcaagaagttgcgattttggt-ccctaactaattaaaatacaaaacagccccctatgtattg 35495171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 428 - 499
Target Start/End: Original strand, 36315790 - 36315861
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||| |||  |||||||| ||| || |||||||||||||||||||| |||||||| || ||||||||||    
T  36315790 gcttaattgcacctttggcccactatgtttcaagaagttgcgattttggacccctaactaattaaaatacaa 36315861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 745 - 811
Target Start/End: Complemental strand, 3296798 - 3296732
Alignment:
Q  745 gtgaacagattcaaattcttcatgttgctgctcaagagaagatgcactttgtctctttattccttct 811  Q
    ||||||||||||||| ||| |||| |||  ||||| | ||||||||||||||||||| |||||||||    
T  3296798 gtgaacagattcaaaatctccatgctgcacctcaaaacaagatgcactttgtctcttcattccttct 3296732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 666
Target Start/End: Complemental strand, 16883571 - 16883501
Alignment:
Q  596 gggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 666  Q
    |||||| ||| ||||||||||| ||||  || ||||||| ||| |||||||||||||||||| ||||||||    
T  16883571 gggctgaattatattttattttgttagagggtcaaaatcacaacttcctgatacttagggggtcaaaactg 16883501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 670
Target Start/End: Complemental strand, 32831300 - 32831166
Alignment:
Q  537 gcattgacttggtcaaaattggcct-ggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    |||||||||||||||||||||| || ||||| |||| | ||||||  | |||||||||  |||| | ||| || |||||||  ||| || |||||||| |    
T  32831300 gcattgacttggtcaaaattggtctagggggtcaaaactgcaaaaaagtcaatacttagagggcagtattttagtttatttagttaagaagccaaaattg 32831201  T
Q  636 caatttcctgatacttagggggccaaaactgctat 670  Q
     || ||| ||| || ||||||||||||||||||||    
T  32831200 taacttcttgaaacatagggggccaaaactgctat 32831166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 53255202 - 53255332
Alignment:
Q  541 tgacttggtcaaaattggcc-tggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaat 639  Q
    |||||||||||||||| ||| |||||| |||| | ||||||  | |||||||||  |||| |  ||||| |||||||  ||||| ||||||||||||||     
T  53255202 tgacttggtcaaaatttgccgtgggggccaaaactgcaaaaaagtcaatacttagagggcggttttgtagtttatttagttagggggccaaaatcgcaac 53255301  T
Q  640 ttcctgatacttagggggccaaaactgctat 670  Q
    ||| | | || |||| |||||||||||||||    
T  53255302 ttcttaaaacataggaggccaaaactgctat 53255332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 499
Target Start/End: Complemental strand, 1807487 - 1807415
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||| ||||||||||||  | | ||||| ||||||||||||| ||| || ||||||||||||||    
T  1807487 aggcttaatagcagttttggccccctatattttaagaatttgcgattttggttccc-aaaaaaataaaatacaa 1807415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 499
Target Start/End: Original strand, 20432189 - 20432262
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||| ||| ||||||||| | | | |||||||||| ||||||||||||| |||| ||| |||||    
T  20432189 aggcttaatagcagtttttgccccctaacttttacgaagttgcgactttggtcccctaagaaaaaaaactacaa 20432262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 499
Target Start/End: Complemental strand, 32831543 - 32831470
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||  || |||||||||||| || | || ||||||| |||||||||||||||| ||||||| |||||    
T  32831543 aggcttaataatagttttggccccctatgtttaaaaaagttgcaattttggtcccctaactaaataaactacaa 32831470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 493
Target Start/End: Complemental strand, 37755250 - 37755185
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaa 493  Q
    ||||||| |||| |||||||||||| || ||| |||||||||||||| | |||||||| |||||||    
T  37755250 gcttaattgcagttttggccccctatgtttcatgaagttgcgattttagccccctaactaaataaa 37755185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 40989718 - 40989621
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||| ||||||||| |||  |||||||||||| || ||||||||||| || ||||| |||||||  || ||||||||||  ||||||| || ||||||    
T  40989718 ttttaaggcttaattgcacttttggccccctatgtttcaagaagttgtgagtttggacccctaattaattaaaatacaaaacagccccatatgtattg 40989621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 46934307 - 46934210
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||| |||  ||||||||||||  | || | ||||||||||| ||| |||||||| || ||||||||||  ||||||| || ||||||    
T  46934307 tttttaggcttaattgcacttttggccccctatctttccaaaagttgcgattatggccccctaactaattaaaatacaaaacagccccatatgtattg 46934210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 489
Target Start/End: Complemental strand, 3193097 - 3193033
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    ||||||||||||||| |||  |||||||| | |||||||||||||||||||  ||||||| ||||    
T  3193097 taggcttaatagcagttttcaccccctaactttcaagaagttgcgattttgaccccctaagaaaa 3193033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 3203358 - 3203413
Alignment:
Q  329 ttcaaacttccctttacatgaatgtttgcatcttt-ttgattt-aagtaaaactat 382  Q
    |||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||||    
T  3203358 ttcaaacttctctttacataaatgtttgcatctttcttgatttcaagtaaaactat 3203413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 663
Target Start/End: Original strand, 17258152 - 17258231
Alignment:
Q  584 ccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 663  Q
    ||||||| || |||||||  |||||||||| ||| ||||| | |||||||||||| ||| ||| || |||||||||||||    
T  17258152 ccaatacatagggggctgttttgtattttaatttgttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaa 17258231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 746 - 800
Target Start/End: Original strand, 3203682 - 3203736
Alignment:
Q  746 tgaacagattcaaattcttcatgttgctgctcaagagaagatgcactttgtctct 800  Q
    |||||||||||||||||| ||||| || |||||  ||||||||||| ||||||||    
T  3203682 tgaacagattcaaattctccatgtcgcagctcacaagaagatgcaccttgtctct 3203736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 3219246 - 3219180
Alignment:
Q  335 cttccctttacatgaatgtttgcatcttt-ttgattt-aagtaaaactatact-taatgcatgcaca 398  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||  | |||||||||||||    
T  3219246 cttcccttaacatgaatgtttgcatctttcttgatttcaagtaaaactatgttgtaatgcatgcaca 3219180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 518
Target Start/End: Original strand, 32831161 - 32831251
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||| |||||||||||| || |||||||||| | |||||||   | |||| ||||||| || ||| | |||| ||||||||||    
T  32831161 gcttaatagcagttttggccccctatgtttcaagaagttacaattttggcttcttaactaaataaactaaaatactgccctctaagtattg 32831251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 564
Target Start/End: Complemental strand, 45333760 - 45333730
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggg 564  Q
    |||||||||||||||||||||||||||||||    
T  45333760 tcagcattgacttggtcaaaattggcctggg 45333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 499
Target Start/End: Complemental strand, 50381606 - 50381548
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||| ||||| || |||||||||||||||||||| ||| |||| || ||||||||||    
T  50381606 tttggctccctatgtttcaagaagttgcgattttggacccttaactaattaaaatacaa 50381548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 499
Target Start/End: Complemental strand, 51226550 - 51226492
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||| |||||| || | |||||||||||||||||| |||||||| || ||||||||||    
T  51226550 tttggtcccctatgttttaagaagttgcgattttggacccctaactaattaaaatacaa 51226492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 516
Target Start/End: Complemental strand, 1429605 - 1429512
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtat 516  Q
    ||||| ||||||| ||| |||| ||| ||||| |||| ||| || ||||||||| | ||||| ||||  || |||||||||||| |||||||||    
T  1429605 tttagacttaataacagttttgaccctctaagcatcatgaacttacgattttggcctcctaagaaaaacaattacaatccagcctcctaagtat 1429512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 3308347 - 3308314
Alignment:
Q  330 tcaaacttccctttacatgaatgtttgcatcttt 363  Q
    |||| |||||||||||||||||||||||||||||    
T  3308347 tcaatcttccctttacatgaatgtttgcatcttt 3308314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 504
Target Start/End: Complemental strand, 11334769 - 11334712
Alignment:
Q  447 cccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccag 504  Q
    |||| ||||||||||||||| ||||||| | ||  |||||||||||||||||| ||||    
T  11334769 ccccaaagtatcaagaagttacgattttagccctataacaaaataaaatacaaaccag 11334712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 483
Target Start/End: Original strand, 14340732 - 14340789
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtccccta 483  Q
    ||||||||||| || ||| ||||||||| | ||| |||||| ||||||||||||||||    
T  14340732 aggcttaataggagttttcgccccctaactttcacgaagttacgattttggtccccta 14340789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 430 - 519
Target Start/End: Complemental strand, 44586097 - 44586008
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||||||| ||| ||||||||| | ||   ||||||||||||||| ||||||| |||| ||| |||||  | ||||||||||| ||||    
T  44586097 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgc 44586008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 518
Target Start/End: Original strand, 51453544 - 51453632
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| |||| |||| || || | |||||||||||||||||  |||||||| ||||||| |||||  | ||| |||||||||||    
T  51453544 cttaatagcagttttgacccc-tatgttttaagaagttgcgattttgaccccctaactaaataaactacaaaaccgcctcctaagtattg 51453632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 54716470 - 54716567
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||| |||  ||||||||||||  | |  | |||||| |||||||  |||||||| || ||||||||||  |||||||||| ||||||    
T  54716470 tttttaggcttaattgcacttttggccccctatcttttcaaaagttgtgattttgaccccctaactaattaaaatacaaaacagccccctatgtattg 54716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 499
Target Start/End: Complemental strand, 54716785 - 54716748
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||||||||||||| || ||||||||||    
T  54716785 aagttgcgattttggtcccctaactaattaaaatacaa 54716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 3e-32; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 534 - 665
Target Start/End: Original strand, 39384500 - 39384630
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||||||||||||||||||||||| ||||||  |||| | ||||||  | || |||||| ||||||||||||||||||||||| ||||||||||||| |    
T  39384500 tcagcattgacttggtcaaaattggtctggggc-caaaactgcaaaaagggcagtacttagggggctggattgtattttattttattaggaggccaaatt 39384598  T
Q  634 cgcaatttcctgatacttagggggccaaaact 665  Q
    ||||| ||||||||||||||||| ||||||||    
T  39384599 cgcaacttcctgatacttaggggaccaaaact 39384630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 532
Target Start/End: Complemental strand, 29816493 - 29816381
Alignment:
Q  419 actttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| ||||||| || |||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||||||||    
T  29816493 actttttaggtttaatagtagttttgaccccttaaatatcaagaagttgcgattttggtcccc-aacaaaataaaatacaatacaaccctctaagtattg 29816395  T
Q  519 cccatttcgcagtt 532  Q
     |||||| ||||||    
T  29816394 tccattttgcagtt 29816381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 532
Target Start/End: Complemental strand, 39384645 - 39384536
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    ||||||||||| || || ||||| ||||||||||||| |||||||||| ||||| | ||||| |||||||||||||||||||||||||||||| |||||     
T  39384645 tttaggcttaacagtagttttggtcccctaagtatcaggaagttgcgaatttggcctcctaataaaataaaatacaatccagccccctaagtactgccct 39384546  T
Q  523 tttcgcagtt 532  Q
    ||| ||||||    
T  39384545 ttttgcagtt 39384536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 429 - 532
Target Start/End: Complemental strand, 10532569 - 10532466
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgc 528  Q
    ||||||||||| |||||||||||| |||| | |||||| ||||||||| || | |||||||||||||||||||||||||||||||||||||  |||| ||    
T  10532569 cttaatagcagttttggccccctatgtattaggaagttacgattttggccctccaacaaaataaaatacaatccagccccctaagtattgcttattttgc 10532470  T
Q  529 agtt 532  Q
    ||||    
T  10532469 agtt 10532466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 533 - 670
Target Start/End: Original strand, 13575073 - 13575209
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaa 631  Q
    ||||||||||||||||||||| ||| ||| |||| | ||| | ||||||    ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  13575073 atcagcattgacttggtcaaa-ttgacctaggggaccaaaactgcaaaaagaacaatacttaaggggctggattgtattttattttgttatg-ggccaaa 13575170  T
Q  632 atcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||  ||||||||||||||||||| |||||||||||    
T  13575171 atcgcatcttcctgatacttagggggctaaaactgctat 13575209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 423 - 532
Target Start/End: Original strand, 10532211 - 10532319
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    ||||||||||||||||| |||| |||||||||||| | |||||||||||||| | |||| |||||||||||||| |||||| |||||||||| ||||||     
T  10532211 tttaggcttaatagcagttttgaccccctaagtattaggaagttgcgatttt-gacccccaacaaaataaaatataatccaaccccctaagttttgcccc 10532309  T
Q  523 tttcgcagtt 532  Q
    ||| ||||||    
T  10532310 ttttgcagtt 10532319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 429 - 518
Target Start/End: Complemental strand, 13575213 - 13575125
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| ||| ||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  13575213 cttaatagcagttttagccccctaagtatcaggaagatgcgattttgg-cccataacaaaataaaatacaatccagccccttaagtattg 13575125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 595 - 663
Target Start/End: Original strand, 1406597 - 1406665
Alignment:
Q  595 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 663  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  1406597 ggggctggattgtattttattttattaggaggtcaaaatcgcaatttcctgatacttagagggccaaaa 1406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 428 - 499
Target Start/End: Original strand, 37008218 - 37008289
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  37008218 gcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaacaaaataaaatacaa 37008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 533 - 670
Target Start/End: Original strand, 29816343 - 29816479
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    ||||||||||||||||||||||||||| |||||| |||| | ||||||| | |||||||||  ||| || ||||||||||||||| || || | ||||||    
T  29816343 atcagcattgacttggtcaaaattggcatgggggccaaaactgcaaaatggacaatacttagagggttgtattgtattttattttgtt-ggggaccaaaa 29816441  T
Q  633 tcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| ||| ||||| ||| |||| ||||||| ||||    
T  29816442 tcgcaacttcttgatatttaaggggtcaaaactactat 29816479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 51549456 - 51549363
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| |||  ||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  51549456 taggcttaattgcaattttggccccctaagtttcaagaagttgcgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 51549363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 441 - 517
Target Start/End: Original strand, 1484384 - 1484460
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    ||||||||||||||||||  |||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||    
T  1484384 tttggccccctaagtatctggaagttgcgattttggccctctaacaaaataaaatataattcagccccctaagtatt 1484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 532
Target Start/End: Complemental strand, 367235 - 367128
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatt 524  Q
    ||||||||||||||| ||||  ||||||  | |||||| ||||||||||||| ||||||||||||||||||||||    | |||||||||||||||||||    
T  367235 taggcttaatagcagttttgatcccctatatttcaagaggttgcgattttggccccctaacaaaataaaatacaaaattgtcccctaagtattgcccatt 367136  T
Q  525 tcgcagtt 532  Q
    | ||||||    
T  367135 ttgcagtt 367128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 430 - 521
Target Start/End: Complemental strand, 1484734 - 1484643
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||||| |||||||| |||||||| | ||||||| |||||||  ||||||||||| ||||||||||| |||||||||||||| |||||    
T  1484734 ttaatagcagttttggccctctaagtattaggaagttgtgattttgaccccctaacaaagtaaaatacaattcagccccctaagtactgccc 1484643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 441 - 532
Target Start/End: Complemental strand, 10231176 - 10231085
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||||||||||||||| |||||||| ||||||||| || |||||||||||||||||||| ||| |||||||||| || || ||| ||||||    
T  10231176 tttggccccctaagtattaagaagtttcgattttggccctctaacaaaataaaatacaattcagtcccctaagtactgtcccttttgcagtt 10231085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 424 - 515
Target Start/End: Original strand, 39384235 - 39384325
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||||||||||  |||||| |||||||||||| |||||||||| ||| | ||| |||||||||||||||||||| |||||||||||||    
T  39384235 ttaggcttaatagcaattttggctccctaagtatcaggaagttgcgagttt-gacccataacaaaataaaatacaatcaagccccctaagta 39384325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 425 - 517
Target Start/End: Original strand, 29816117 - 29816206
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    ||||||||||||||  |||| |||||||||||||| |||||||   |||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  29816117 taggcttaatagcaattttgaccccctaagtatcaggaagttg---ttttggccccctaacaaaataaaatacaattcagccccataagtatt 29816206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 670
Target Start/End: Complemental strand, 10532353 - 10532221
Alignment:
Q  538 cattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||||||||||||||  |||||||| ||| | ||||||  | ||| ||||| |||| |||||| ||||||||||| || || || |||||||||    
T  10532353 cattgacttggtcaaaattggtatggggggccaaaactgcaaaaggggcaaaacttagggggttggattatattttattttgttggg-ggtcaaaatcgc 10532255  T
Q  637 aatttcctgatacttagggggccaaaactgctat 670  Q
    || ||||| |||||||||||| ||||||||||||    
T  10532254 aacttcctaatacttagggggtcaaaactgctat 10532221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 585 - 670
Target Start/End: Original strand, 10532480 - 10532565
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||| ||||||||||||||||||||||| || |  ||||||||||| || ||||| |||| ||||||||||||||||||||    
T  10532480 caatacttagggggctggattgtattttattttgttggagggccaaaatcgtaacttcctaatacatagggggccaaaactgctat 10532565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 670
Target Start/End: Complemental strand, 37008355 - 37008223
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||||||||||||||||||||||  |||| | |||||   |  ||| |||||| ||| |  |||||||||||||| ||||| ||||||||||||    
T  37008355 gcattgacttggtcaaaattggcctggggc-caaaactgcaaaggggtaaattcttaagcggcagttttgtattttattttgttagggggccaaaatcgc 37008257  T
Q  637 aatttcctgatacttagggggccaaaactgctat 670  Q
    || ||| ||| || ||||||||||||||||||||    
T  37008256 aacttcttgaaacatagggggccaaaactgctat 37008223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 508
Target Start/End: Complemental strand, 1406684 - 1406597
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccc 508  Q
    |||||||||||||||| |  |||||||| |||||||||| ||| |||||||||||  | ||||| |||||||||||||||||||||||    
T  1406684 tttttaggcttaatagtatttttggccctctaagtatcaggaaattgcgattttgacctcctaataaaataaaatacaatccagcccc 1406597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 586 - 665
Target Start/End: Complemental strand, 1484460 - 1484381
Alignment:
Q  586 aatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaact 665  Q
    |||||||| ||||||| ||| ||||||||||| ||||  |||||||||||||| |||| |||||||||||||||||||||    
T  1484460 aatacttagggggctgaattatattttattttgttagagggccaaaatcgcaacttccagatacttagggggccaaaact 1484381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 670
Target Start/End: Complemental strand, 7196820 - 7196682
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaa 631  Q
    |||||| ||||||||||||||||||||||||||||| ||| | ||||||  | ||||||||| ||||| |  ||||| |||||||  |||| ||||||||    
T  7196820 atcagctttgacttggtcaaaattggcctggggggctaaaactgcaaaaaagtcaatacttagggggcagttttgtagtttatttagttagcaggccaaa 7196721  T
Q  632 atcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||| ||| ||| |  ||| ||| ||||||||||||    
T  7196720 atcgcaacttcttgaaatatagagggtcaaaactgctat 7196682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 426 - 532
Target Start/End: Original strand, 10230786 - 10230891
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||||||| ||| ||||||||||||||||| | |||||||| |||| |  |||||||||||||||||| ||||||| ||||||||||| || || |||    
T  10230786 aggcttaataacagttttggccccctaagtataaggaagttgcaatttcga-cccctaacaaaataaaattcaatccaaccccctaagtactgtcctttt 10230884  T
Q  526 cgcagtt 532  Q
     ||||||    
T  10230885 tgcagtt 10230891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 517
Target Start/End: Original strand, 46895431 - 46895527
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    ||||| ||||||||||||| ||||||||||||  | ||||||||||||||||||| ||| ||||| ||||||| |||||  | | ||||||||||||    
T  46895431 ttttttggcttaatagcagttttggccccctatatttcaagaagttgcgattttgatcctctaactaaataaactacaaaactgtcccctaagtatt 46895527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 46895855 - 46895763
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||| |||||||||||| || |||||||||||||||||||  ||| |||| ||||||| |||||  | |||||||||||||||    
T  46895855 aggcttaattgcagttttggccccctatgtttcaagaagttgcgattttgaccccataactaaataaattacaaaaccgccccctaagtattg 46895763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 536 - 666
Target Start/End: Original strand, 10231049 - 10231180
Alignment:
Q  536 agcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatc 634  Q
    |||||||||||||| || ||||| ||| ||||| ||| | ||||||  | || |||||| ||| ||| ||||||||||||||| ||||  ||||||||||    
T  10231049 agcattgacttggttaacattggtctgaggggccaaaactgcaaaagggacagtacttaggggactgaattgtattttattttgttagagggccaaaatc 10231148  T
Q  635 gcaatttcctgatacttagggggccaaaactg 666  Q
    | || ||| | |||||||||||||||||||||    
T  10231149 gaaacttcttaatacttagggggccaaaactg 10231180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 430 - 517
Target Start/End: Original strand, 31651337 - 31651423
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    |||||||||| ||||||||| ||||||| |  |||||||||||||||| || |||||||||||||| |||| || |||||||||||||    
T  31651337 ttaatagcagctttggccccataagtattagaaagttgcgattttggt-ccttaacaaaataaaattcaattcaaccccctaagtatt 31651423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 588 - 670
Target Start/End: Original strand, 1484649 - 1484731
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| ||||||| ||||||||||| ||| ||||| || ||||||| ||| ||||| |||||||| ||||||||||||||||    
T  1484649 tacttagggggctgaattgtattttactttgttagggggtcaaaatcacaacttcctaatacttagagggccaaaactgctat 1484731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 586 - 670
Target Start/End: Complemental strand, 29816206 - 29816125
Alignment:
Q  586 aatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||| ||||||| ||||||||||||||| ||||| ||||||||   ||| |||||||||||||||||| ||||| ||||||    
T  29816206 aatacttatggggctgaattgtattttattttgttagggggccaaaa---caacttcctgatacttagggggtcaaaattgctat 29816125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 447 - 521
Target Start/End: Complemental strand, 39411946 - 39411873
Alignment:
Q  447 cccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||||||||| |  ||||||||||||||  |||||||||||||||||||||||||| || ||||||||||||||    
T  39411946 cccctaagtataagaaagttgcgattttga-cccctaacaaaataaaatacaatccaacctcctaagtattgccc 39411873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 421 - 499
Target Start/End: Complemental strand, 41915842 - 41915764
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||||||||| ||||| ||||||  | ||||||||||||||||||| ||||||||  ||||||| |||||    
T  41915842 tttttaggcttaatagcagttttggtcccctatatttcaagaagttgcgattttgatcccctaaataaataaactacaa 41915764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 670
Target Start/End: Complemental strand, 39384380 - 39384244
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    ||||||||||||||||||||||| | | ||||||| ||| | | ||||  | |  |||||| |||||| |||||||||||||||| ||| | || ||||     
T  39384380 tcagcattgacttggtcaaaattagtccggggggccaaaactgtaaaaggggcggtacttagggggcttgattgtattttattttgttatg-ggtcaaac 39384282  T
Q  633 tcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| |||||||||||||||| ||||||| ||||||    
T  39384281 tcgcaacttcctgatacttagggagccaaaattgctat 39384244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 429 - 518
Target Start/End: Complemental strand, 40877057 - 40876968
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||| |||| |||||||||||| ||  ||||||||||||||||||| |||||||| ||||||| |||||  | ||||| |||||||||    
T  40877057 cttaattgcagttttggccccctatgttccaagaagttgcgattttggccccctaactaaataaactacaaaaccgccccttaagtattg 40876968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 532
Target Start/End: Original strand, 366880 - 366991
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaa-caaaataaaatacaatccagccccctaagtattgc 519  Q
    |||| |||||||||||||| |||||||||||| || | ||||||||  ||||||   ||||||| |||||||||||||||  | |||||||||||||||     
T  366880 ttttaaggcttaatagcagttttggccccctatgttttaagaagttatgattttaaccccctaaccaaaataaaatacaaaac-gccccctaagtattgt 366978  T
Q  520 ccatttcgcagtt 532  Q
    |||||| ||||||    
T  366979 ccattttgcagtt 366991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 3814758 - 3814818
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||||||||||| |||||||| || ||||||||||| |||||||| ||||||||    
T  3814758 taggcttaatagcagatttagccccctatgtttcaagaagttgtgattttggccccctaac 3814818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 532
Target Start/End: Complemental strand, 84312 - 84229
Alignment:
Q  449 cctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||||||||| |||||||| |||||||  | |||||||||||||||||||||||||| | ||||||  |||| ||| ||||||    
T  84312 cctaagtatcaggaagttgcaattttggctctctaacaaaataaaatacaatccagcctcataagtacggccccttttgcagtt 84229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 441 - 499
Target Start/End: Complemental strand, 7058423 - 7058365
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||| || |||||||||||||||||||| |||||||| || ||||||||||    
T  7058423 tttggccccctatgtttcaagaagttgcgattttggacccctaactaagtaaaatacaa 7058365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 426 - 515
Target Start/End: Complemental strand, 51690515 - 51690426
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||||||| || ||||  | ||||| ||||   ||||||||||||||| | | ||||||||||||||||||| ||||||||||||||    
T  51690515 aggcttaatagtagttttgatctcctaaatatccgaaagttgcgattttggcctcgtaacaaaataaaatacaattcagccccctaagta 51690426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 3815112 - 3815052
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||||||| ||||  |||||| || |||||||||||||||||||| ||||||||    
T  3815112 taggcttaatagcagttttgaacccctatgtttcaagaagttgcgattttggccccctaac 3815052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 633
Target Start/End: Complemental strand, 13574960 - 13574860
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||||||||||||||||||||| ||| |||| | |||   ||||||  |  | |||||||||||||| ||||||||||||||| ||||| ||||||||    
T  13574960 tcagcattgacttggtcaaaattgacctaggggaccaaaattgcaaaaggggtagtacttaaggggctgaattgtattttattttgttagggggccaaaa 13574861  T
Q  633 t 633  Q
    |    
T  13574860 t 13574860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 667
Target Start/End: Original strand, 40876930 - 40877050
Alignment:
Q  548 gtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctga 646  Q
    ||||||| ||| ||||||||| ||| | ||||||  | ||||||||||||||| |  ||||| |||||||  ||||| |||||||||||||| ||| ||     
T  40876930 gtcaaaactggtctggggggccaaaactgcaaaaaagtcaatacttaaggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgg 40877029  T
Q  647 tacttagggggccaaaactgc 667  Q
     || |||||||||||||||||    
T  40877030 aacatagggggccaaaactgc 40877050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 7196676 - 7196767
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||| ||| |||  | |||||||||||||||||||| |  ||||| ||||||| |||||  | |||||||||||||||    
T  7196676 ggcttaatagcagttttgaccctctatatttcaagaagttgcgattttggcctgctaactaaataaactacaaaactgccccctaagtattg 7196767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 426 - 485
Target Start/End: Complemental strand, 12075328 - 12075269
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    |||||||||||||| |||||||||||| || |  ||||||||||||||||| ||||||||    
T  12075328 aggcttaatagcagttttggccccctatgtttacagaagttgcgattttggccccctaac 12075269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 424 - 499
Target Start/End: Complemental strand, 31908009 - 31907934
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||| |||||||||| ||||||| | ||| ||||| ||||||| ||||||||||   ||||||||||||||||||    
T  31908009 ttagggttaatagcagttttggccacttaaatatcaggaagttgtgattttggtcatttaacaaaataaaatacaa 31907934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 654
Target Start/End: Original strand, 84246 - 84312
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagg 654  Q
    |||||| | ||||||||||||||||||||| ||||   |||||||| |||| |||||||||||||||    
T  84246 tacttatgaggctggattgtattttattttgttagagagccaaaattgcaacttcctgatacttagg 84312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 426 - 484
Target Start/End: Complemental strand, 3612503 - 3612445
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaa 484  Q
    |||||||||||||| ||| | ||||||||| ||||||||||| |||||||||| |||||    
T  3612503 aggcttaatagcagttttagtcccctaagtttcaagaagttgagattttggtctcctaa 3612445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 666
Target Start/End: Complemental strand, 10230874 - 10230797
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 666  Q
    |||||| |||| ||||||| |||||||||| ||||| || | |||| |||| ||||| |||||||||||||||||||||    
T  10230874 tacttagggggttggattgaattttattttgttagg-ggtcgaaattgcaacttccttatacttagggggccaaaactg 10230797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 505
Target Start/End: Original strand, 22347541 - 22347595
Alignment:
Q  451 taagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagc 505  Q
    ||||||| | ||||||||| ||||  |||||||||||||||||||||||||||||    
T  22347541 taagtattaggaagttgcgcttttactcccctaacaaaataaaatacaatccagc 22347595  T

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Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 623
Target Start/End: Original strand, 37008466 - 37008548
Alignment:
Q  541 tgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttagg 623  Q
    |||||||||||||||||||||||||| ||||   ||||||  | ||||||||| ||||| |  |||||||||||||| |||||    
T  37008466 tgacttggtcaaaattggcctgggggccaaaattgcaaaaggggcaatacttagggggcagttttgtattttattttgttagg 37008548  T

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Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 521
Target Start/End: Complemental strand, 37008557 - 37008507
Alignment:
Q  471 ttttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||| |||||||||||||||||||||||  | ||||||||||||||||||    
T  37008557 ttttgatcccctaacaaaataaaatacaaaactgccccctaagtattgccc 37008507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 43117249 - 43117327
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||  |||||||||| ||| ||| |||| || ||||||||||||||||||||||| ||||  ||||||| |||||    
T  43117249 tttttagatttaatagcagttttagccacctatgtttcaagaagttgcgattttggtcctctaaataaataaactacaa 43117327  T

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Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 424 - 518
Target Start/End: Original strand, 50503698 - 50503792
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||  ||  ||||| |||||| || | |||||||||||||||||| |||||||| || ||||||||||  |||||| ||| ||||||    
T  50503698 ttaggcttaatttcacttttggtcccctatgttttaagaagttgcgattttggccccctaactaattaaaatacaaaacagccctctatgtattg 50503792  T

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Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 638
Target Start/End: Original strand, 51690426 - 51690476
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 638  Q
    |||||| ||||||| ||||||||||||||| ||| ||||||||||||||||    
T  51690426 tacttagggggctgaattgtattttattttgttacgaggccaaaatcgcaa 51690476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 13344495 - 13344398
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| ||||| |||  ||||||||||||  | |  | |||||||||||||||||||||||| || ||||||||||  || ||||||| ||||||    
T  13344495 tttttaggtttaattgcacttttggccccctattttttcaaaagttgcgattttggtcccctaactaattaaaatacaaaacaaccccctatgtattg 13344398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 470 - 515
Target Start/End: Original strand, 13574860 - 13574905
Alignment:
Q  470 attttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  13574860 attttggccccctaacaaaataaaatacaattcagccccttaagta 13574905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 519
Target Start/End: Complemental strand, 46573142 - 46573049
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||||||||||| ||| | || |||| | | | |||||||||||||||||||||||| |||| ||| |||||  | ||||||||||| ||||    
T  46573142 aggcttaatagcagtttttgtcctctaacttttacgaagttgcgattttggtcccctaagaaaaaaaactacaacactgccccctaagttttgc 46573049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 367088 - 367195
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctgggggg--caaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaa 630  Q
    |||||| |||||||| ||||||||| ||| |||||  |||| | ||||||| | ||||||||| ||| |    |||||||||||||| ||||| ||||||    
T  367088 atcagctttgacttgttcaaaattgacctaggggggccaaaactgcaaaatgggcaatacttaggggacaattttgtattttattttgttagggggccaa 367187  T
Q  631 aatcgcaa 638  Q
    ||||||||    
T  367188 aatcgcaa 367195  T

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Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 6606978 - 6606922
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  6606978 aagttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtattg 6606922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 12074958 - 12075014
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||| |||||| ||||| || |||||||||||||||||||  ||||||||    
T  12074958 cttaatagcagttttggctccctatgtttcaagaagttgcgattttgaccccctaac 12075014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 431 - 475
Target Start/End: Complemental strand, 23953160 - 23953116
Alignment:
Q  431 taatagcagatttggccccctaagtatcaagaagttgcgattttg 475  Q
    ||||||||| |||||||||||| || |||||||||||||||||||    
T  23953160 taatagcagttttggccccctatgtttcaagaagttgcgattttg 23953116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 426 - 514
Target Start/End: Original strand, 39642199 - 39642287
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagt 514  Q
    |||||||||||||| ||| ||||||||| | ||| |||||||||||||||| || ||||  ||| ||| |||||  | |||||||||||    
T  39642199 aggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccctctaaataaaaaaactacaaaaccgccccctaagt 39642287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 517
Target Start/End: Complemental strand, 44743785 - 44743694
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    |||| |||||| ||| |||||||||| | || || ||||||||||||||| | ||| ||||||||||||||||||  | ||||| ||||||||    
T  44743785 taggtttaatatcagttttggcccccaatgtttccagaagttgcgatttt-gacccataacaaaataaaatacaaaaccgccccataagtatt 44743694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 483
Target Start/End: Complemental strand, 35820169 - 35820110
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtccccta 483  Q
    ||||||||||| |||| |||||||||||||||||||  |  |||||||||||| ||||||    
T  35820169 ttaggcttaattgcagttttggccccctaagtatcacaatcttgcgattttggcccccta 35820110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 656
Target Start/End: Original strand, 39411876 - 39411946
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggg 656  Q
    ||||||||| | || |||||||||||||||||| ||||| || ||||||||||| || || |||||||||||    
T  39411876 caatacttaggaggttggattgtattttattttgttagg-ggtcaaaatcgcaactttcttatacttagggg 39411946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 518
Target Start/End: Original strand, 49695382 - 49695441
Alignment:
Q  459 aagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||| |||||||  || ||||||||||  |||||||||| ||||||    
T  49695382 aagaagttgcgattttggccccctaattaattaaaatacaaaacagccccctatgtattg 49695441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 508
Target Start/End: Original strand, 51548382 - 51548433
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccc 508  Q
    |||||||||||||||||| |||||||||| || ||||||||||  |||||||    
T  51548382 tcaagaagttgcgattttcgtcccctaactaattaaaatacaaaacagcccc 51548433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 532
Target Start/End: Original strand, 1406362 - 1406416
Alignment:
Q  478 cccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||||||||||||||||||||| |||| ||||||||| | ||| ||| ||||||    
T  1406362 cccctaacaaaataaaatacaattcagcgccctaagtactaccccttttgcagtt 1406416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 623
Target Start/End: Complemental strand, 1406454 - 1406364
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttagg 623  Q
    |||||||||||||||||||||||| |||| ||||| ||| | ||||||  |  | |||||| || |||| ||||||||||||||| |||||    
T  1406454 tcagcattgacttggtcaaaattgacctgaggggccaaaactgcaaaaggggtagtacttagggcgctgaattgtattttattttgttagg 1406364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 518
Target Start/End: Original strand, 15788407 - 15788501
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| |||| || | | | ||| || ||||||||||||||| |||| |||||||| ||||||| |||||  | ||| |||||||||||    
T  15788407 ttaggcttaattgcagtttcgacactctatgtttcaagaagttgcgatattggccccctaactaaataaactacaaaaccgcctcctaagtattg 15788501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 421 - 475
Target Start/End: Original strand, 25085393 - 25085447
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttg 475  Q
    ||||||||||||||||||| ||| ||||||||| | |||  ||||||||||||||    
T  25085393 tttttaggcttaatagcagttttcgccccctaactttcataaagttgcgattttg 25085447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 474
Target Start/End: Complemental strand, 25486529 - 25486479
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgatttt 474  Q
    |||||||||||||||| ||| ||||||||| | ||| ||||||||||||||    
T  25486529 ttaggcttaatagcagtttttgccccctaactttcacgaagttgcgatttt 25486479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 518
Target Start/End: Complemental strand, 35580985 - 35580891
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| |||  ||||||||||||  | |  | ||||||||||||||| | |||||| || ||||||||||  |||||||||| ||||||    
T  35580985 ttaggcttaattgcacttttggccccctattttttcaaaagttgcgattttggcctcctaactaattaaaatacaaaacagccccctatgtattg 35580891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 499
Target Start/End: Original strand, 40345312 - 40345354
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||    
T  40345312 tcaagaaattgcaattttggtcccctaataaaataaaatacaa 40345354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 462 - 520
Target Start/End: Complemental strand, 40345609 - 40345551
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||||||||||||| | | ||||||||||||||||||  | |||| ||||||||||||    
T  40345609 aagttgcgattttggcctcataacaaaataaaatacaaaactgccctctaagtattgcc 40345551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 499
Target Start/End: Complemental strand, 50504850 - 50504792
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||| ||||||| || | |||||||||||||||||| |||||||| || ||||||||||    
T  50504850 tttgaccccctatgttttaagaagttgcgattttggacccctaactaattaaaatacaa 50504792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 51462175 - 51462252
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||| | |  ||||||||| || || |||||||||||||||||||| || ||||| || ||||||||||    
T  51462175 tttttaggcttaattgtacttttggcccc-tatgtttcaagaagttgcgattttggacctctaactaattaaaatacaa 51462252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 585 - 663
Target Start/End: Original strand, 51549363 - 51549441
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 663  Q
    |||||| || |||||||  |||||||||| ||  ||||| | |||||||||||| ||| ||| ||||||||||||||||    
T  51549363 caatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttcttgaaacttagggggccaaaa 51549441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 7197027 - 7196934
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| || | |||| || || | |||||||||||||||||   ||||||| ||||||| |||||    |||||||||||||||    
T  7197027 taggcttaatagcagtttcgaccccttatgttttaagaagttgcgattttgactccctaactaaataaactacaaaatcgccccctaagtattg 7196934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 511
Target Start/End: Complemental strand, 15911981 - 15911932
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagcccccta 511  Q
    ||||||||||||||| |||||||| || ||||||||||  ||||||||||    
T  15911981 aagttgcgattttggccccctaactaattaaaatacaaaacagcccccta 15911932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 21258917 - 21259010
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| |||  |||| || |||| || | |||||||||||||||||| | |||||| || ||||||||||  || ||||||| ||||||    
T  21258917 taggcttaattgcacttttgaccacctatgttttaagaagttgcgattttggactcctaactaattaaaatacaaaacaaccccctatgtattg 21259010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 666
Target Start/End: Complemental strand, 39411662 - 39411595
Alignment:
Q  597 ggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 666  Q
    ||||| ||||||||||||||| ||||| ||||||||||  |||||||| |||||||  ||||||||||||    
T  39411662 ggctgaattgtattttattttgttagg-ggccaaaatcctaatttcctaatactta-agggccaaaactg 39411595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 39411626 - 39411674
Alignment:
Q  469 gattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| ||||||||||||||||||||||| |||||  ||||||||||    
T  39411626 gattttgg-cccctaacaaaataaaatacaattcagccttctaagtattg 39411674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 518
Target Start/End: Original strand, 41611255 - 41611332
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||  | || | ||||||||||||||| |||||||| || |||||| |||  |||||||||| ||||||    
T  41611255 tttggccccctatttttccaaaagttgcgattttggccccctaactaattaaaatgcaaaacagccccctatgtattg 41611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 670
Target Start/End: Complemental strand, 43117394 - 43117261
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||||||||||||| | ||||||| |||| | ||||||  | ||||||||| | ||  |  ||||| |||||||  ||||  | ||||||||||    
T  43117394 gcattgacttggtcaaaatttgtctgggggccaaaactgcaaaaaagtcaatacttaggaggtggttttgtagtttatttatttagaggaccaaaatcgc 43117295  T
Q  637 aatttcctgatacttagggggccaaaactgctat 670  Q
    || ||| ||| || |||| ||| |||||||||||    
T  43117294 aacttcttgaaacataggtggctaaaactgctat 43117261  T

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Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 499
Target Start/End: Complemental strand, 49696980 - 49696907
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||| |||  |||||||||||| || ||||||||||| |||||| | ||| |||| || ||||||||||    
T  49696980 aggcttaattgcatttttggccccctatgtttcaagaagttgtgattttagacccttaactaattaaaatacaa 49696907  T

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Target: chr7 (Bit Score: 68; Significance: 6e-30; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 421 - 532
Target Start/End: Original strand, 24432330 - 24432441
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||||||||||||||||  |||| ||| |||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||| ||||    
T  24432330 tttttaggcttaatagcaattttgacccactaagtatcaagaagttgcgattttggctccctaaaaaaataaaatacagtccagccccctaagtactgcc 24432429  T
Q  521 catttcgcagtt 532  Q
    | ||| ||||||    
T  24432430 ccttttgcagtt 24432441  T

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Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 532
Target Start/End: Complemental strand, 21939392 - 21939283
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||| ||||  || ||||||||| |||||||||| | ||||     
T  21939392 tttaggcttaatagcagttttggccccctaagtatcacgaagttgcgattttggccccctaaaaaaaacaattacaatccaaccccctaagtttagcccc 21939293  T
Q  523 tttcgcagtt 532  Q
    ||| ||||||    
T  21939292 ttttgcagtt 21939283  T

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Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 427 - 520
Target Start/End: Complemental strand, 24679158 - 24679065
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||||||| ||| |||||||||||| || ||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  24679158 ggcttaataacagttttggccccctatgtttcaagaaattgcgattttggccccctaacaaaataaaatacaaaacagccccctaagtattgcc 24679065  T

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Target: chr7; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 429 - 521
Target Start/End: Original strand, 27756267 - 27756359
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||||||||| ||||||||| ||||||| | | |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  27756267 cttaatagcagttttggccccttaagtattaggtagttgcgattttggccccctaacaaaataaaatacaatccagcctcctaagtactgccc 27756359  T

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Target: chr7; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 535 - 670
Target Start/End: Complemental strand, 24432476 - 24432342
Alignment:
Q  535 cagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatc 634  Q
    |||||||||||||||||||||||| ||||||| |||| | ||||||  | || |||||| ||||||||| ||||||||||||| |||||  |||||||||    
T  24432476 cagcattgacttggtcaaaattggtctggggg-caaaactgcaaaaggggcagtacttagggggctggactgtattttatttttttagggagccaaaatc 24432378  T
Q  635 gcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||| ||| |||||||||| ||| ||||| ||||||    
T  24432377 gcaacttcttgatacttagtgggtcaaaattgctat 24432342  T

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Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 520
Target Start/End: Original strand, 28960649 - 28960739
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| || ||| ||||||||||||    
T  28960649 gcttaatagcagttttggcccc-taagtatcaagaagttgtgattttggt-ccctaacaaaataaaatacaattcaaccctctaagtattgcc 28960739  T

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Target: chr7; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 562 - 666
Target Start/End: Original strand, 24679044 - 24679148
Alignment:
Q  562 ggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaa 661  Q
    ||||| |||| | |||||| || ||||||||| |||||||  |||||||||||||| ||||| |||||||||||||||||| ||| || |||||||||||    
T  24679044 gggggccaaaactgcaaaaatggcaatacttagggggctgttttgtattttattttgttagggggccaaaatcgcaatttcttgaaacatagggggccaa 24679143  T
Q  662 aactg 666  Q
    |||||    
T  24679144 aactg 24679148  T

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Target: chr7; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 427 - 515
Target Start/End: Original strand, 35793375 - 35793463
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||||||||| ||||||||||||| | | | |||||||||||||| | ||||||||||||||||||||||| ||||||| ||||||    
T  35793375 ggcttaatagcagttttggccccctaaattttaggaagttgcgattttaggcccctaacaaaataaaatacaattcagccccttaagta 35793463  T

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Target: chr7; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 43078118 - 43078026
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||| |||||||  ||||||| |||||  ||||||| |||||||||    
T  43078118 aggcttaatagcagatttggccccctctgtttcaagaagttgcgattttggccccctaattaaataaactacaaaacagccccttaagtattg 43078026  T

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Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 537 - 663
Target Start/End: Complemental strand, 10691438 - 10691311
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    |||||||||| ||||||||||| ||||||||| ||||| ||||||  | ||||||||||||||| |  ||||| |||||||  ||||| |||||||||||    
T  10691438 gcattgactttgtcaaaattggtctggggggccaaagctgcaaaaaagtcaatacttaaggggcagttttgtagtttatttagttagggggccaaaatcg 10691339  T
Q  636 caatttcctgatacttagggggccaaaa 663  Q
    ||| ||| ||| || |||||||||||||    
T  10691338 caacttcttgaaacatagggggccaaaa 10691311  T

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Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 588 - 670
Target Start/End: Complemental strand, 27756353 - 27756271
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| | ||||||||||||||||||||| ||||| |||||||||||||| | ||| ||||||| |||||||||||||||||    
T  27756353 tacttaggaggctggattgtattttattttgttagggggccaaaatcgcaactacctaatacttaaggggccaaaactgctat 27756271  T

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Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 638
Target Start/End: Original strand, 9477365 - 9477466
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||||||||||||||| ||||||| ||||   ||||||| | |||||||||||||||    |||||||||||||| ||||| ||||||||||||    
T  9477365 gcattgacttggtcaaaattggtctgggggccaaaattgcaaaatgggcaatacttaaggggcgattttgtattttattttgttagggggccaaaatcgc 9477464  T
Q  637 aa 638  Q
    ||    
T  9477465 aa 9477466  T

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Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 7873504 - 7873600
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||| |||| ||||||| || ||||| |||||||||||||| |||||||| ||||||| |||||  | |||||||||||||||    
T  7873504 ttttaggcttaattgcagttttgaccccctatgtttcaaggagttgcgattttggccccctaactaaataaactacaaaaccgccccctaagtattg 7873600  T

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Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 532
Target Start/End: Complemental strand, 26787986 - 26787875
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||||||||||||||| || ||||||||||||  | |||| |||||| |||||| | | ||||||||||||||||||||  | ||||||||||||||| |    
T  26787986 tttttaggcttaatagtagttttggccccctatatttcaaaaagttgtgatttttgcctcctaacaaaataaaatacaaaaccgccccctaagtattgtc 26787887  T
Q  521 catttcgcagtt 532  Q
    | ||| ||||||    
T  26787886 ctttttgcagtt 26787875  T

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Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 537 - 670
Target Start/End: Original strand, 43077976 - 43078111
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggc-aaagcagcaaaatt-gccaatacttaaggggctggattgtattttattttcttaggaggccaaaatc 634  Q
    |||||||||||||||||||||| ||||||||| ||| | ||||||   | |||||||||||||||||  ||||| |||||||  ||||| ||||||||||    
T  43077976 gcattgacttggtcaaaattggtctggggggccaaaactgcaaaaaaagtcaatacttaaggggctgttttgtagtttatttaattagggggccaaaatc 43078075  T
Q  635 gcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||| ||| ||| ||  ||||||||||| |||||||    
T  43078076 gcaacttcttgaaacagagggggccaaatctgctat 43078111  T

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Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 426 - 517
Target Start/End: Complemental strand, 43092095 - 43092004
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    ||||||||||||||||||||||||||| || |||||||||| | ||||||| |||||||| ||||||| |||||  | ||||| ||||||||    
T  43092095 aggcttaatagcagatttggccccctatgtttcaagaagttacaattttggccccctaactaaataaactacaaaaccgccccttaagtatt 43092004  T

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Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 536 - 670
Target Start/End: Original strand, 24432569 - 24432702
Alignment:
Q  536 agcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    |||||||| |||||||||||| |||||| || |||| | ||||||  | || || | |||||||| |||||||||||||||| ||||   ||||||||||    
T  24432569 agcattgatttggtcaaaattagcctggaggccaaaactgcaaaaggggcactattcaaggggctagattgtattttattttgttagtgagccaaaatcg 24432668  T
Q  636 caatttcctgatacttagggggccaaaactgctat 670  Q
    |||  |||| ||||||| |||||||||||||||||    
T  24432669 caa-ctcctaatacttaaggggccaaaactgctat 24432702  T

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Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 588 - 670
Target Start/End: Complemental strand, 35793463 - 35793381
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||||||| ||||||||||||||| ||||| | | |||||||||| ||||| | | |||||||||||||||||||||    
T  35793463 tacttaaggggctgaattgtattttattttgttaggggcctaaaatcgcaacttcctaaaatttagggggccaaaactgctat 35793381  T

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Target: chr7; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 430 - 514
Target Start/End: Complemental strand, 9500213 - 9500128
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaa-tacaatccagccccctaagt 514  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||  | |||||||||||    
T  9500213 ttaatagcagttttagccccctaagtttcaagaagttgcgattttggtcccctaagaaaaaaaaactacaaaaccgccccctaagt 9500128  T

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Target: chr7; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 589 - 670
Target Start/End: Original strand, 21939301 - 21939382
Alignment:
Q  589 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| |||| ||||||||| ||  |||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  21939301 acttagggggttggattgtaattgttttttttagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctat 21939382  T

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Target: chr7; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 670
Target Start/End: Complemental strand, 35828492 - 35828355
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||||||||||||| |||||||| ||| ||||| ||| | ||||||  | |  |||||| ||||||| |||||||||| |||| |||||||| |||||    
T  35828492 tcagcattgacttggtgaaaattggtctgaggggccaaaactgcaaaaggggcggtacttagggggctgaattgtattttgttttgttaggaggtcaaaa 35828393  T
Q  633 tcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| || |||||| ||| | || ||||||||||||    
T  35828392 tcgcaactttctgatatttaagaggtcaaaactgctat 35828355  T

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Target: chr7; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 670
Target Start/End: Original strand, 35828582 - 35828719
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagca-gcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||||||||||| | ||||||||||| |||||| ||  | ||||||  |  | |||||||||||||||||||||||||||||| ||||||||  ||||    
T  35828582 tcagcattgacttgataaaaattggcctagggggccaaaaatgcaaaaggggtagtacttaaggggctggattgtattttattttattaggaggtaaaaa 35828681  T
Q  633 tcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||  |||||| | ||||||| |||| ||||||| ||||    
T  35828682 tcataatttcataatacttatggggtcaaaactactat 35828719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 327498 - 327434
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||||||||||| | |||||||||| || |||||||||||||||||||| ||||||||    
T  327498 tttttaggcttaatagcagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 327434  T

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Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 429 - 525
Target Start/End: Complemental strand, 9477502 - 9477406
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    ||||||||||| |||| || |||| || | || ||||||||||||||| ||||||||||||||||||||||    ||||| ||||||||||||||||    
T  9477502 cttaatagcagttttgacctcctatgttttaaaaagttgcgattttggccccctaacaaaataaaatacaaaatcgccccttaagtattgcccattt 9477406  T

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Target: chr7; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 521
Target Start/End: Original strand, 30283404 - 30283500
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||||| |||| |||  |||| || || |||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||||||||    
T  30283404 taggcttaattgcagtttttaccccttatgtttcaagaagttgcgattttggccccataacaaaataaaatacaaaaatgccccctaagtattgccc 30283500  T

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Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 10691298 - 10691389
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  |||||||||||| || |||||||||||||||||||| |||||||| ||||||| |||||  | ||||| |||||||||    
T  10691298 ggcttaattgcaattttggccccctatgtttcaagaagttgcgattttggccccctaactaaataaactacaaaactgccccttaagtattg 10691389  T

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Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 430 - 532
Target Start/End: Original strand, 9477136 - 9477238
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgca 529  Q
    |||||||||| |||||||||||| || | || ||||||||||||| | ||| ||||||||||||||||||  | ||||  |||||||||||| ||| |||    
T  9477136 ttaatagcagttttggccccctatgttttaaaaagttgcgattttagccccttaacaaaataaaatacaaaactgccctttaagtattgccccttttgca 9477235  T
Q  530 gtt 532  Q
    |||    
T  9477236 gtt 9477238  T

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Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 426 - 532
Target Start/End: Original strand, 35828348 - 35828454
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||||||||||| |||| || | ||| |||||  ||||||||||||||  | |||||||||| |||||||||| ||||||||||||||  |||| |||    
T  35828348 aggcttaatagcagttttgacctcttaaatatcagaaagttgcgattttgacctcctaacaaaacaaaatacaattcagccccctaagtaccgccccttt 35828447  T
Q  526 cgcagtt 532  Q
     ||||||    
T  35828448 tgcagtt 35828454  T

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Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 667
Target Start/End: Original strand, 10691561 - 10691694
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||| |||||||||||||||||||| |||||| |||| | ||||||  | ||||||||| ||||| |  ||||| |||||||  ||||| |||||||||    
T  10691561 tcagctttgacttggtcaaaattggcatgggggccaaaactgcaaaaaagtcaatacttagggggcggttttgtagtttatttagttagggggccaaaat 10691660  T
Q  634 cgcaatttcctgatacttagggggccaaaactgc 667  Q
    || || ||| ||| || |||||||  ||||||||    
T  10691661 cgtaacttcttgaaacatagggggtaaaaactgc 10691694  T

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Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 422 - 515
Target Start/End: Complemental strand, 35793787 - 35793694
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||||||| | ||| ||||||||| ||| ||  | |||||| ||||||||  ||| |||||||||||||||||||| |||||||||||||    
T  35793787 ttttaggcttaacaacagttttggccccataaatactaggaagttacgattttgaccccttaacaaaataaaatacaatctagccccctaagta 35793694  T

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Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 46199047 - 46199144
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||||||| |||| ||| |||  | | ||||||||||||||||||||||||||  ||||||| |||||  |  ||||||||||||||    
T  46199047 tttttaggcttaatagcagttttgcccctctatattttaagaagttgcgattttggtcccctaaataaataaactacaaaaccaccccctaagtattg 46199144  T

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Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 282917 - 282857
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||||||| ||||||| |||| || |||||||||||||||||||| ||||||||    
T  282917 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggccccctaac 282857  T

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Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 521
Target Start/End: Original strand, 28350115 - 28350210
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||||||||| ||| ||||||||| | ||| |||||| ||||||||| ||||||| |||| ||| |||||  | ||||||||||| ||||||    
T  28350115 aggcttaatagcagttttagccccctaactttcacgaagttacgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgccc 28350210  T

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Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 441 - 532
Target Start/End: Complemental strand, 30283765 - 30283674
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    |||||||||||| ||||||| ||||||||||||||  ||||||| ||||||||||||||    ||| | |||||||||| ||||| ||||||    
T  30283765 tttggccccctatgtatcaaaaagttgcgattttgaccccctaataaaataaaatacaaaatcgcctcttaagtattgcacattttgcagtt 30283674  T

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Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 441 - 515
Target Start/End: Original strand, 15327716 - 15327789
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||| ||||||||| | ||| |||| ||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  15327716 tttggcctcctaagtataaggaatttgcaattttgg-cccctaacaaaataaaatacaattcagcctcctaagta 15327789  T

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Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 532
Target Start/End: Complemental strand, 15328058 - 15327953
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||||| ||||| ||| | ||||||||||| | | ||||| ||||||   ||||||||||||||||||||||| |||||||||||||| || || |||    
T  15328058 aggcttaacagcagttttagtcccctaagtattagggagttgtgattttaa-cccctaacaaaataaaatacaatacagccccctaagtactgtcccttt 15327960  T
Q  526 cgcagtt 532  Q
     ||||||    
T  15327959 tgcagtt 15327953  T

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Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 508
Target Start/End: Complemental strand, 24432705 - 24432628
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccc 508  Q
    |||||||||| ||||||||| ||||||| | || |||||||||||||  | ||||||||||||||||||||| ||||||    
T  24432705 ttaatagcagttttggccccttaagtattagga-gttgcgattttggctcactaacaaaataaaatacaatctagcccc 24432628  T

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Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 967696 - 967640
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||| |||||| |||| |||||||||||||||||||| ||||||| |||||||||    
T  967696 aagttgtgattttagtcctctaacaaaataaaatacaattcagccccttaagtattg 967640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 7873946 - 7873854
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||| |||||||||||| || ||||||| ||| ||||||||  ||||||| ||||||| |||||  | ||||||||| |||||    
T  7873946 aggcttaattgcagttttggccccctatgtttcaagaaattgtgattttggctccctaactaaataaactacaaaaccgccccctaattattg 7873854  T

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Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 446 - 518
Target Start/End: Complemental strand, 10691684 - 10691612
Alignment:
Q  446 ccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||| || |||||||||| ||||||||| |||||||| ||||||| |||||  | |||||||||||||||    
T  10691684 ccccctatgtttcaagaagttacgattttggccccctaactaaataaactacaaaaccgccccctaagtattg 10691612  T

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Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 664
Target Start/End: Complemental strand, 15327789 - 15327714
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaac 664  Q
    |||||| | ||||| ||||||||||||||| ||||| ||||||||| |||| ||||| ||||||||| |||||||||    
T  15327789 tacttaggaggctgaattgtattttattttgttagg-ggccaaaattgcaaattccttatacttaggaggccaaaac 15327714  T

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Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 47030295 - 47030363
Alignment:
Q  447 cccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||||||| |  |||||||||||||| |||| ||||||||||||||||||| || ||| |||||||    
T  47030295 cccctaagtataagaaagttgcgattttgatcccataacaaaataaaatacaatacaaccctctaagta 47030363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 540 - 670
Target Start/End: Complemental strand, 9477270 - 9477139
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 638  Q
    ||||||||||||||||||  ||||| ||| ||| | ||||||  | |||||||||| |||| |  |||||||||||||| ||| | ||| ||||||||||    
T  9477270 ttgacttggtcaaaattgatctgggaggccaaaactgcaaaaggggcaatacttaaagggcagttttgtattttattttgttaaggggctaaaatcgcaa 9477171  T
Q  639 tttcctgatacttagggggccaaaactgctat 670  Q
     ||  | | || ||||||||||||||||||||    
T  9477170 ctttttaaaacatagggggccaaaactgctat 9477139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 423 - 518
Target Start/End: Original strand, 26974226 - 26974321
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||| ||||| |||  ||||||||||||  | ||||||||||||||||||||  || |||| || ||||||||||  |||||||||| ||||||    
T  26974226 tttaggtttaattgcacttttggccccctatatttcaagaagttgcgattttggctccttaactaattaaaatacaaaacagccccctatgtattg 26974321  T

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Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 423 - 518
Target Start/End: Complemental strand, 29933591 - 29933496
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| ||| |||| ||| ||| || | |||||||||||||||||| | |||||| ||| ||| |||||  || ||||||||||||||    
T  29933591 tttaggcttaataacagttttgaccctctatgttttaagaagttgcgattttggcctcctaactaaaaaaactacaaaacaaccccctaagtattg 29933496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 461 - 532
Target Start/End: Complemental strand, 43657875 - 43657804
Alignment:
Q  461 gaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||||||||||||||  |||||||||||||||||||||| |||| |  |||||||| ||| ||| ||||||    
T  43657875 gaagttgcgattttggcaccctaacaaaataaaatacaattcagctctttaagtatttccccttttgcagtt 43657804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 519
Target Start/End: Complemental strand, 6792116 - 6792018
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||||| |||||||||| ||| ||||||||| | |    ||||||||||||||||||||||| |||| ||| |||||  | ||||||||||| ||||    
T  6792116 tttttaggtttaatagcagttttagccccctaacttttccaaagttgcgattttggtcccctaagaaaaaaaactacaaaaccgccccctaagttttgc 6792018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 670
Target Start/End: Original strand, 9500149 - 9500210
Alignment:
Q  609 ttttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||| |||||||||| | |||||||||||| ||| ||| ||||||||||| |||||||||||    
T  9500149 tttttttttcttaggggaccaaaatcgcaacttcttgaaacttagggggctaaaactgctat 9500210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 670
Target Start/End: Complemental strand, 28960737 - 28960654
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||  ||| || ||||||||||||||| ||||| | |||||||| ||| ||| ||||||||| |||||||||||||||||    
T  28960737 caatacttagagggttgaattgtattttattttgttagg-gaccaaaatcacaacttcttgatactta-ggggccaaaactgctat 28960654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 518
Target Start/End: Complemental strand, 42438060 - 42437999
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||| |||||||| || ||||||||||   ||||||||| ||||||    
T  42438060 tcaagaagttgcgattttggccccctaactaattaaaatacaaaagagccccctatgtattg 42437999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 44565277 - 44565346
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccct 510  Q
    |||| |||||||||||| | |||||||| ||||||| | ||||||||||||||| | ||| |||||||||    
T  44565277 tttgaccccctaagtattatgaagttgcaattttggcctcctaacaaaataaaaaataattcagccccct 44565346  T

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Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 499
Target Start/End: Complemental strand, 46266568 - 46266495
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||| ||| || |||||||| |||||||||||| ||||||  ||||||| |||| ||| |||||    
T  46266568 aggcttaatagcagttttagctccctaagtttcaagaagttgcaattttgcccccctaagaaaaaaaactacaa 46266495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 521
Target Start/End: Complemental strand, 48059267 - 48059166
Alignment:
Q  420 ctttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||| ||||||||||||| ||| | ||||||||| | ||||||||| ||||||||  ||| || |||| ||| |||||  | ||||||||||| ||||    
T  48059267 cttttttggcttaatagcagttttaggcccctaagttttaagaagttgtgattttggcaccccaagaaaaaaaactacaaaaccgccccctaagttttgc 48059168  T
Q  520 cc 521  Q
    ||    
T  48059167 cc 48059166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 20588433 - 20588377
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  20588433 aagttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtattg 20588377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 40790949 - 40790893
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  40790949 aagttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtattg 40790893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 595 - 663
Target Start/End: Complemental strand, 44565344 - 44565276
Alignment:
Q  595 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 663  Q
    ||||||| ||| | ||||||||| ||||||||||||||| |||| ||| | |||||||||||| |||||    
T  44565344 ggggctgaattattttttattttgttaggaggccaaaattgcaacttcataatacttagggggtcaaaa 44565276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 45480107 - 45480051
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||| ||||| || ||||||||||  |||||||||| ||||||    
T  45480107 aagttgcgattttggtcctctaactaattaaaatacaaaacagccccctatgtattg 45480051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 568
Target Start/End: Complemental strand, 282619 - 282584
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggc 568  Q
    ||||||||||||||||||||||||||||| ||||||    
T  282619 atcagcattgacttggtcaaaattggcctagggggc 282584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 531
Target Start/End: Original strand, 12493531 - 12493621
Alignment:
Q  440 atttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagt 531  Q
    ||||||| |||||||||||| ||| |||||||||||| ||| ||||||||  ||  |||| |||||||| ||||||| |||| ||| |||||    
T  12493531 atttggctccctaagtatcacgaacttgcgattttgg-cccataacaaaaacaataacaacccagccccttaagtatagccccttttgcagt 12493621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 29933190 - 29933281
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||| || |||| || |||||||||||||||||||| || ||||  ||||||| || ||  | |||| ||||||||||    
T  29933190 ggcttaatagcagttttgacctcctatgtttcaagaagttgcgattttggccctctaattaaataaactataaaaccgccctctaagtattg 29933281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 638
Target Start/End: Original strand, 29933450 - 29933549
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 638  Q
    |||||||||||||||||||||| | |||| ||| | ||||||  | ||||||||| |||| ||  ||||| ||| |||  ||||||||||||||||||||    
T  29933450 ttgacttggtcaaaattggccttgtgggctaaaactgcaaaaaagtcaatacttagggggttgttttgtagtttttttagttaggaggccaaaatcgcaa 29933549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 663
Target Start/End: Original strand, 30283707 - 30283766
Alignment:
Q  604 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 663  Q
    |||||||||||||| ||||| || ||||||||||| ||  |||||| |||||||||||||    
T  30283707 ttgtattttattttattagggggtcaaaatcgcaactttttgatacatagggggccaaaa 30283766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 42436829 - 42436920
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  |||||||||||| || | |||||||| ||||||||| |||||||| || | ||||||||  |||||| ||| ||||||    
T  42436829 ggcttaattgcatttttggccccctatgttttaagaagttacgattttggacccctaactaattgaaatacaaaacagccctctatgtattg 42436920  T

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Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 1450419 - 1450365
Alignment:
Q  464 gttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  1450419 gttgcgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 1450365  T

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Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 668
Target Start/End: Original strand, 15327917 - 15328049
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    |||||||||||||| | |||||||| ||| ||  |||| | ||||||  | || |||||| ||||||| ||||||||||||||| ||||| ||  |||||    
T  15327917 tcagcattgacttgattaaaattggtctgaggc-caaaactgcaaaagggacagtacttagggggctgtattgtattttattttgttagg-ggttaaaat 15328014  T
Q  634 cgcaatttcctgatacttagggggccaaaactgct 668  Q
    | ||| | ||| ||||||||||| | |||||||||    
T  15328015 cacaactccctaatacttaggggactaaaactgct 15328049  T

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Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 23826339 - 23826269
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaa 494  Q
    |||||||||||||||| ||| | ||||||| | ||| |||||||||||||||| ||| ||| |||| ||||    
T  23826339 ttaggcttaatagcagtttttgtcccctaactttcacgaagttgcgattttggccccttaagaaaaaaaaa 23826269  T

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Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 28350188 - 28350122
Alignment:
Q  604 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| ||| |||||||||| ||||||||||| || ||| ||| | ||||||||| |||||||||||    
T  28350188 ttgtagttttttttcttagggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctat 28350122  T

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Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 447 - 517
Target Start/End: Complemental strand, 30505175 - 30505105
Alignment:
Q  447 cccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    |||||| || |||||||||||||||||||  | |||||| || ||||||||||  |||||||||| |||||    
T  30505175 cccctatgtttcaagaagttgcgattttgtactcctaactaattaaaatacaaaacagccccctatgtatt 30505105  T

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Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 588 - 666
Target Start/End: Original strand, 35793694 - 35793772
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 666  Q
    |||||| |||||| |||||||||||||||| ||| | || |||||||| || |||||  || ||| |||||||||||||    
T  35793694 tacttagggggctagattgtattttattttgttaaggggtcaaaatcgtaacttcctagtatttatggggccaaaactg 35793772  T

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Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 421 - 515
Target Start/End: Complemental strand, 35828731 - 35828637
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||| ||||||||| || |||| |||| ||||||| | ||| ||  ||||||   | ||||| ||||||||||||||||||||||| ||||||    
T  35828731 tttttaagcttaatagtagttttgaccccataagtattatgaaattatgatttttacctcctaataaaataaaatacaatccagccccttaagta 35828637  T

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Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 489
Target Start/End: Original strand, 36580274 - 36580336
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    ||||||||||||| ||| | ||||||| | ||| ||||||| |||||||||||||||| ||||    
T  36580274 ggcttaatagcagttttcggcccctaactttcacgaagttgtgattttggtcccctaagaaaa 36580336  T

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Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 586 - 644
Target Start/End: Original strand, 43657819 - 43657877
Alignment:
Q  586 aatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcct 644  Q
    ||||||||| | |||| ||||||||||||||| |||||  ||||||||||||| |||||    
T  43657819 aatacttaaagagctgaattgtattttattttgttagggtgccaaaatcgcaacttcct 43657877  T

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Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 563
Target Start/End: Original strand, 44565520 - 44565550
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctgg 563  Q
    |||||||||||||||||||||||||||||||    
T  44565520 atcagcattgacttggtcaaaattggcctgg 44565550  T

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Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 622
Target Start/End: Original strand, 967640 - 967677
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttag 622  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  967640 caatacttaaggggctgaattgtattttattttgttag 967677  T

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Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 21938114 - 21938201
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagt 514  Q
    |||| |||||||||| ||||||||| ||| |||||  ||||||||||||| |  |||||| |||| ||  ||||||||||||||||||||    
T  21938114 taggtttaatagcagttttggcccc-taaatatcataaagttgcgattttagctccctaaaaaaacaat-tacaatccagccccctaagt 21938201  T

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Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 670
Target Start/End: Original strand, 26787889 - 26787974
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||| ||||| |  |||||||||||||| ||||||||| |||||| ||| ||  ||| |  ||||||||||||||| ||||    
T  26787889 caatacttagggggcggttttgtattttattttgttaggaggcaaaaatcacaactttttgaaatatagggggccaaaactactat 26787974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 430 - 499
Target Start/End: Complemental strand, 34116176 - 34116108
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||| || ||||||||| || |||||||||||||||||||||||   |||||| ||||||| |||||    
T  34116176 ttaatagtagttttggcccc-tatgtatcaagaagttgcgattttggcttcctaactaaataaactacaa 34116108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 43724597 - 43724646
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagcccccta 511  Q
    ||||||||||||||| |||||||| || ||||||||||  ||||||||||    
T  43724597 aagttgcgattttggccccctaactaattaaaatacaaatcagcccccta 43724646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 6e-30; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 533 - 655
Target Start/End: Complemental strand, 1614958 - 1614835
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctgggggg-caaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaa 631  Q
    ||||||||||||||||||||||| ||||||||||  |||| | ||||||| | ||||| ||| ||||||||||||||||||||||| ||||||||||| |    
T  1614958 atcagcattgacttggtcaaaatgggcctgggggatcaaaactgcaaaatgggcaatatttagggggctggattgtattttattttgttaggaggccaca 1614859  T
Q  632 atcgcaatttcctgatacttaggg 655  Q
    ||||||| ||||| ||||||||||    
T  1614858 atcgcaacttcctaatacttaggg 1614835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 423 - 532
Target Start/End: Complemental strand, 2164775 - 2164666
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||| || ||     
T  2164775 tttatgcttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaatccagccccctaagtactgtccc 2164676  T
Q  523 tttcgcagtt 532  Q
    ||| ||||||    
T  2164675 ttttgcagtt 2164666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 423 - 532
Target Start/End: Complemental strand, 2176408 - 2176299
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||| || ||     
T  2176408 tttatgcttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaatccagccccctaagtactgtccc 2176309  T
Q  523 tttcgcagtt 532  Q
    ||| ||||||    
T  2176308 ttttgcagtt 2176299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 536 - 670
Target Start/End: Original strand, 2164632 - 2164765
Alignment:
Q  536 agcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    ||||||| |||||||||||||||| ||||   |||| | ||||||  | || |||||| ||||||||||||||||||||||| |||||  | ||||||||    
T  2164632 agcattgtcttggtcaaaattggcatgggca-caaaactgcaaaagggacagtacttagggggctggattgtattttattttgttagggtgtcaaaatcg 2164730  T
Q  636 caatttcctgatacttagggggccaaaactgctat 670  Q
    ||| ||||||||||| |||||||||||||||||||    
T  2164731 caacttcctgatactcagggggccaaaactgctat 2164765  T

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Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 536 - 670
Target Start/End: Original strand, 2176265 - 2176398
Alignment:
Q  536 agcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    ||||||| |||||||||||||||| ||||   |||| | ||||||  | || |||||| ||||||||||||||||||||||| |||||  | ||||||||    
T  2176265 agcattgtcttggtcaaaattggcatgggca-caaaactgcaaaagggacagtacttagggggctggattgtattttattttgttagggtgtcaaaatcg 2176363  T
Q  636 caatttcctgatacttagggggccaaaactgctat 670  Q
    ||| ||||||||||| |||||||||||||||||||    
T  2176364 caacttcctgatactcagggggccaaaactgctat 2176398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 448 - 532
Target Start/End: Original strand, 1614835 - 1614919
Alignment:
Q  448 ccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    |||||||||| | |||||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  1614835 ccctaagtattaggaagttgcgattgtggcctcctaacaaaataaaatacaatccagccccctaaatattgcccattttgcagtt 1614919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 666
Target Start/End: Original strand, 1614974 - 1615103
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttctta-ggaggccaaaatcg 635  Q
    |||||||||||||||||||||||||||| |||||  |  |||||  | |||||||| ||| |||||||||||||||||||| ||| || |||||||||||    
T  1614974 gcattgacttggtcaaaattggcctgggaggcaagactacaaaaggggcaatactt-aggtgctggattgtattttattttgttaggggggccaaaatcg 1615072  T
Q  636 caatttcctgatacttagggggccaaaactg 666  Q
    ||| || || ||||||||||||| |||||||    
T  1615073 caactttctaatacttagggggctaaaactg 1615103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 423 - 532
Target Start/End: Complemental strand, 12101773 - 12101666
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    ||||||||||||||||| ||  | ||| |||||||||  |||||| |||||||| | |||||||||||||||||||||||||||||||||||| |||||     
T  12101773 tttaggcttaatagcagttt--gtcccttaagtatcagaaagttgtgattttggcctcctaacaaaataaaatacaatccagccccctaagtactgccct 12101676  T
Q  523 tttcgcagtt 532  Q
    ||| ||||||    
T  12101675 ttttgcagtt 12101666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 12799112 - 12799015
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||||||||| ||| |||| |||  | |||||||||||||||||||||| ||||||||||||||||||||  || ||||||||||||||    
T  12799112 tttttaggtttaatagcagttttagccctctatatttcaagaagttgcgattttggtcacctaacaaaataaaatacaaaacaaccccctaagtattg 12799015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 427 - 514
Target Start/End: Original strand, 30369784 - 30369870
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagt 514  Q
    ||||||||||||| ||||||||| || || | |||||||||||||||| |||||||||||||||||||||| || | |||||||||||    
T  30369784 ggcttaatagcagttttggccccttatgttttaagaagttgcgatttt-gtcccctaacaaaataaaatactataccgccccctaagt 30369870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 426 - 532
Target Start/End: Complemental strand, 9070184 - 9070078
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||||||||||  |||||||||||| || ||||||||||||||||||   || |||| ||| ||||||||||  | ||||||||||||||| ||||||    
T  9070184 aggcttaatagcatttttggccccctatgtttcaagaagttgcgattttaaccctctaataaagtaaaatacaaaaccgccccctaagtattgtccattt 9070085  T
Q  526 cgcagtt 532  Q
     ||||||    
T  9070084 tgcagtt 9070078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 670
Target Start/End: Original strand, 12798966 - 12799100
Alignment:
Q  537 gcattgacttggtcaaaattggcctgggggg-caaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    ||||||||||||||||||||||||||||||| |||| | ||| ||  | ||||||||| |||| ||  |||||||||||||| ||||| | |||||||||    
T  12798966 gcattgacttggtcaaaattggcctggggggccaaaactgcagaagggacaatacttagggggttgttttgtattttattttgttaggtgaccaaaatcg 12799065  T
Q  636 caatttcctgatacttagggggccaaaactgctat 670  Q
    ||| ||| ||| |  ||| |||| |||||||||||    
T  12799066 caacttcttgaaatatagagggctaaaactgctat 12799100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 422 - 515
Target Start/End: Original strand, 2164415 - 2164507
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||||||||||||| ||||  || ||||||||||  ||||||||||||||| ||||||| ||| ||||||||| | ||||||||||||||    
T  2164415 ttttaggcttaatagcagttttgatcctctaagtatcataaagttgcgattttgg-cccctaataaagtaaaatacagttcagccccctaagta 2164507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 422 - 515
Target Start/End: Original strand, 2176048 - 2176140
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||||||||||||| ||||  || ||||||||||  ||||||||||||||| ||||||| ||| ||||||||| | ||||||||||||||    
T  2176048 ttttaggcttaatagcagttttgatcctctaagtatcataaagttgcgattttgg-cccctaataaagtaaaatacagttcagccccctaagta 2176140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 518
Target Start/End: Original strand, 2017171 - 2017263
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||  ||||| ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  2017171 aggcttaattgcatttttggtcccctaagtttcaagaagttgtgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 2017263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 4793895 - 4793799
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||  ||| |||| ||| || ||||| |||||||||||||| |||||||| || ||||||||||  |||||||||||||||||    
T  4793895 ttttaggcttaattgcattttttgcccactatgtttcaagcagttgcgattttggacccctaactaattaaaatacaaaacagccccctaagtattg 4793799  T

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Target: chr6; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 12101683 - 12101747
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatactta 652  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||||    
T  12101683 tacttagggggctggattgtattttattttgttaggaggccaaaatcacaactttctgatactta 12101747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 425 - 517
Target Start/End: Original strand, 13398383 - 13398471
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    ||||||||||| ||| |||| |||| ||| ||||||||||||||||||||||   | ||||||||||||||||||||||||| ||||| ||||    
T  13398383 taggcttaataacagttttgtcccc-taaatatcaagaagttgcgattttgg---cataacaaaataaaatacaatccagccacctaactatt 13398471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 445 - 521
Target Start/End: Complemental strand, 1615095 - 1615019
Alignment:
Q  445 gccccctaagtatcaagaagttgcgattttggtcccc-taacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||||||||||| |  ||||||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||    
T  1615095 gccccctaagtattagaaagttgcgattttggcccccctaacaaaataaaatacaatccag-cacctaagtattgccc 1615019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 426 - 499
Target Start/End: Original strand, 12798726 - 12798798
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||| ||||||||||||  | |||||||||||||||||| | | ||||||||||||||||||||    
T  12798726 aggcttaatagcagttttggccccctatatttcaagaagttgcgatttttg-ctcctaacaaaataaaatacaa 12798798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 427 - 511
Target Start/End: Original strand, 11623159 - 11623243
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccccta 511  Q
    |||||||| |||  |||||||| ||| || |||||||||||||||||||| |||||||| || ||||||||||  ||||||||||    
T  11623159 ggcttaattgcacttttggccctctatgtttcaagaagttgcgattttggccccctaactaattaaaatacaaaacagcccccta 11623243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 534 - 670
Target Start/End: Complemental strand, 12798867 - 12798733
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||| |||||||||||||||||| |||||||| |||| |  |||||  |  |||||||| ||||| |  |||||||||||||| ||||||| | |||||    
T  12798867 tcagctttgacttggtcaaaattgacctgggggccaaaactacaaaaggggtaatactta-ggggcggttttgtattttattttgttaggag-caaaaat 12798770  T
Q  634 cgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| ||| ||| |  ||||||||||||||||||||    
T  12798769 cgcaacttcttgaaatatagggggccaaaactgctat 12798733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 427 - 518
Target Start/End: Complemental strand, 11624362 - 11624271
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  |||| ||||||| || |||||||||||| ||||||  ||||||||||| ||||||||||  |||||||||| ||||||    
T  11624362 ggcttaattgcaattttgaccccctatgtttcaagaagttgcaattttgaacccctaacaaattaaaatacaaaacagccccctatgtattg 11624271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 427 - 518
Target Start/End: Complemental strand, 28574620 - 28574529
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  |||||||||||| || |||||||||||||||||||| |||||||| || ||||||| ||  ||| |||||| ||||||    
T  28574620 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttggccccctaactaattaaaatataaaacagacccctatgtattg 28574529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 670
Target Start/End: Original strand, 9070061 - 9070177
Alignment:
Q  554 attggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttag 653  Q
    |||||| ||||||||||| | ||||||| | ||||||||| ||||| |  |||||||||| ||| ||||  ||  |||||||||| ||| ||| || |||    
T  9070061 attggcttggggggcaaaactgcaaaatggacaatacttagggggcggttttgtattttactttattagagggttaaaatcgcaacttcttgaaacatag 9070160  T
Q  654 ggggccaaaactgctat 670  Q
    |||||||||| ||||||    
T  9070161 ggggccaaaaatgctat 9070177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 521
Target Start/End: Original strand, 10088081 - 10088177
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||||||| |  ||||| || |||| ||||| | |||| ||||||||| ||||||||| |||||||||||||  ||||| ||||||| |||||    
T  10088081 taggcttaataggatttttggtcctctaaatatcacggagttacgattttggccccctaacagaataaaatacaatttagccctctaagtactgccc 10088177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 429 - 532
Target Start/End: Complemental strand, 499416 - 499314
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgc 528  Q
    |||||| |||| |||| || | ||||||||| ||  | ||||||||||||||||||||||||||| ||||| |||| || ||||||| ||||| ||| ||    
T  499416 cttaatcgcagttttgacctcgtaagtatcacgatctggcgattttggtcccctaacaaaataaattacaacccag-ccgctaagtactgccccttttgc 499318  T
Q  529 agtt 532  Q
    ||||    
T  499317 agtt 499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 475
Target Start/End: Original strand, 238924 - 238978
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttg 475  Q
    ||||||||||||||||||| ||| ||||||||| | ||| |||||||||||||||    
T  238924 tttttaggcttaatagcagttttcgccccctaattttcacgaagttgcgattttg 238978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 441 - 499
Target Start/End: Original strand, 12203906 - 12203964
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||| || |||||||||||||||||||  |||||||| || ||||||||||    
T  12203906 tttggccccctatgtttcaagaagttgcgattttgaccccctaactaattaaaatacaa 12203964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 518
Target Start/End: Original strand, 29873074 - 29873134
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  29873074 tcaagaagttgcgattttgg-cccctaactaattaaaatacaaaacagccccctatgtattg 29873134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 532
Target Start/End: Complemental strand, 30370091 - 30370031
Alignment:
Q  471 ttttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    |||||| ||||||||||||||||||||||  | | |||||||||||||||||||| ||||||    
T  30370091 ttttggccccctaacaaaataaaatacaaaactg-cccctaagtattgcccattttgcagtt 30370031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 518
Target Start/End: Original strand, 33265100 - 33265177
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||  | || | |||||||||||||||||| ||||| || ||||||||||  |||||||||| ||||||    
T  33265100 tttggccccctatctttctaaaagttgcgattttggtcctctaactaattaaaatacaaaacagccccctacgtattg 33265177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 1894483 - 1894539
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||| |||||||||| ||||| |||||||||||||||||  ||| ||||||||||    
T  1894483 aagttgtgattttggtcacctaataaaataaaatacaatccgaccctctaagtattg 1894539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 427 - 499
Target Start/End: Original strand, 2538983 - 2539054
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||| || ||||| |||||| || | || ||||||||||||||  ||||||||||||||||||||||    
T  2538983 ggcttaatagtagttttggtcccctatgttttaaaaagttgcgattttga-cccctaacaaaataaaatacaa 2539054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 12730614 - 12730558
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||| || ||||||    
T  12730614 aagttgcgattttggtcccctaactaattaaaatacaaaacagccccatatgtattg 12730558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 446 - 518
Target Start/End: Complemental strand, 29874498 - 29874426
Alignment:
Q  446 ccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||| || |||||||||||||||||| | |||||||| || ||||||||||  || ||||||| ||||||    
T  29874498 ccccctatgtttcaagaagttgcgatttttgacccctaactaattaaaatacaaaacaaccccctatgtattg 29874426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 489
Target Start/End: Complemental strand, 12766529 - 12766466
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||||||| |||  |||||||| | ||| |||||||||||||||| ||||||| ||||    
T  12766529 aggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggccccctaaaaaaa 12766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 496
Target Start/End: Original strand, 22515987 - 22516042
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaata 496  Q
    ||||| |||||| || |||||||||||||||||||| |||||||| || |||||||    
T  22515987 tttggtcccctatgtttcaagaagttgcgattttggacccctaactaattaaaata 22516042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 632
Target Start/End: Original strand, 30369993 - 30370091
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    ||||| |||||| |||||||||||| ||||| ||| ||| | ||||||| | ||||||||| ||||| |  |||||||||||||| ||||| ||||||||    
T  30369993 tcagccttgactcggtcaaaattggtctgggaggccaaaactgcaaaatgggcaatactta-ggggcagttttgtattttattttgttagggggccaaaa 30370091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 588 - 670
Target Start/End: Complemental strand, 2164507 - 2164426
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| ||||||| | ||||||||| ||| ||||| |||||||||||||| ||  |||||||||| ||  ||||||||||||    
T  2164507 tacttagggggctgaactgtattttactttattagg-ggccaaaatcgcaactttatgatacttagaggatcaaaactgctat 2164426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 588 - 670
Target Start/End: Complemental strand, 2176140 - 2176059
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| ||||||| | ||||||||| ||| ||||| |||||||||||||| ||  |||||||||| ||  ||||||||||||    
T  2176140 tacttagggggctgaactgtattttactttattagg-ggccaaaatcgcaactttatgatacttagaggatcaaaactgctat 2176059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 571
Target Start/End: Complemental strand, 7504700 - 7504662
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggcaaa 571  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  7504700 atcagcattgacttggtcaaaattagcctagggggcaaa 7504662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 499
Target Start/End: Complemental strand, 10582182 - 10582140
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||||||||| |||||||| ||||||| |||||    
T  10582182 tcaagaagttgcgattttggccccctaactaaataaactacaa 10582140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 497
Target Start/End: Original strand, 15139572 - 15139642
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatac 497  Q
    ||||||||||||| |||| || ||||||||  | |||||||||||||| | ||  ||||||||||||||||    
T  15139572 ggcttaatagcagttttgacctcctaagtactaggaagttgcgatttttgccctttaacaaaataaaatac 15139642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 2018617 - 2018540
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| || || |||||||||||||||||||| |||||||  || ||||||| ||  ||||||| || ||||||    
T  2018617 tttggccccttatgtttcaagaagttgcgattttggccccctaattaattaaaatataaaacagccccttatgtattg 2018540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 499
Target Start/End: Original strand, 2840824 - 2840861
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  2840824 aagttgcgattttggtcccctaaaaaaaaaaaatacaa 2840861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 66; Significance: 1e-28; HSPs: 4)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 423 - 532
Target Start/End: Original strand, 17634 - 17743
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||| || ||     
T  17634 tttatgcttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaatccagccccctaagtactgtccc 17733  T
Q  523 tttcgcagtt 532  Q
    ||| ||||||    
T  17734 ttttgcagtt 17743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 536 - 670
Target Start/End: Complemental strand, 17777 - 17644
Alignment:
Q  536 agcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    ||||||| |||||||||||||||| ||||   |||| | ||||||  | || |||||| ||||||||||||||||||||||| |||||  | ||||||||    
T  17777 agcattgtcttggtcaaaattggcatgggca-caaaactgcaaaagggacagtacttagggggctggattgtattttattttgttagggtgtcaaaatcg 17679  T
Q  636 caatttcctgatacttagggggccaaaactgctat 670  Q
    ||| ||||||||||| |||||||||||||||||||    
T  17678 caacttcctgatactcagggggccaaaactgctat 17644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 422 - 515
Target Start/End: Complemental strand, 17994 - 17902
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||||||||||||| ||||  || ||||||||||  ||||||||||||||| ||||||| ||| ||||||||| | ||||||||||||||    
T  17994 ttttaggcttaatagcagttttgatcctctaagtatcataaagttgcgattttgg-cccctaataaagtaaaatacagttcagccccctaagta 17902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 588 - 670
Target Start/End: Original strand, 17902 - 17983
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| ||||||| | ||||||||| ||| ||||| |||||||||||||| ||  |||||||||| ||  ||||||||||||    
T  17902 tacttagggggctgaactgtattttactttattagg-ggccaaaatcgcaactttatgatacttagaggatcaaaactgctat 17983  T

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Target: chr4 (Bit Score: 66; Significance: 1e-28; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 426 - 515
Target Start/End: Original strand, 3369846 - 3369935
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  3369846 aggcttaatatcagtttttgccccctaagtatcaagaagttgcgattttggccccctaacaaaataaaatacaattcagccccttaagta 3369935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 534 - 670
Target Start/End: Complemental strand, 30626726 - 30626590
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    ||||| |||| ||||||||||||||| |||| ||| ||| | ||||||  | || || ||| ||| ||| |||||||||| |||| ||||||||||||||    
T  30626726 tcagcgttgaattggtcaaaattggcttgggaggccaaaactgcaaaaggggcagtatttaggggactgaattgtattttcttttgttaggaggccaaaa 30626627  T
Q  633 tcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30626626 tcgcaatttcctgatactta-ggggccaaaactgctat 30626590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 588 - 666
Target Start/End: Complemental strand, 3369935 - 3369857
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 666  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||||| |||||||    
T  3369935 tacttaaggggctgaattgtattttattttgttagggggccaaaatcgcaacttcttgatacttagggggcaaaaactg 3369857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 534 - 670
Target Start/End: Original strand, 12690008 - 12690143
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    |||||||||||||||||||||||| |||||||  |||| | |||||||   || |||||| ||||||| ||||||||||||||||||| ||||  |||||    
T  12690008 tcagcattgacttggtcaaaattgccctggggc-caaaactgcaaaatgagcagtacttagggggctgaattgtattttattttcttaagaggtgaaaat 12690106  T
Q  634 cgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| ||| ||||||||||  | |||||||| ||||    
T  12690107 cgcaacttcatgatacttagatgaccaaaactactat 12690143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 512
Target Start/End: Original strand, 16322979 - 16323062
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaa 512  Q
    ||||||| ||| ||||||||| ||||||| |||||||||||||||||  ||| ||||||||||||||||||||| |||||||||    
T  16322979 cttaataacagttttggccccttaagtattaagaagttgcgattttgaccccataacaaaataaaatacaatccggccccctaa 16323062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 53831152 - 53831243
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| ||||||| |||||  | ||| |||||||||||    
T  53831152 ggcttaatagcagttttggccccctatgttttaagaagttgcgattttggtcccctaactaaataaactacaaaactgcctcctaagtattg 53831243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 30627090 - 30627006
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccc 508  Q
    |||||||||||||||| |||  ||||||||||||||| ||||| ||||||||  ||| ||||||||||||||||||| |||||||    
T  30627090 ttaggcttaatagcagttttcaccccctaagtatcaaaaagttacgattttgaccccataacaaaataaaatacaattcagcccc 30627006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 426 - 521
Target Start/End: Complemental strand, 1096614 - 1096519
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||||||| |||| ||||||||||||||||||| ||  | |||||||||| |||||||||||||||| |||||  ||||||| |||||| |||||    
T  1096614 aggcttaattgcagttttggccccctaagtatcatgatttggcgattttggccccctaacaaaataaattacaactcagccccttaagtactgccc 1096519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 430 - 532
Target Start/End: Original strand, 30626587 - 30626688
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgca 529  Q
    |||||||||| ||||||||| ||||||||| ||| |||||||||||| | |||||||||| |||||||||| ||| ||||||| || ||||| ||| |||    
T  30626587 ttaatagcagttttggcccc-taagtatcaggaaattgcgattttggcctcctaacaaaagaaaatacaattcagtcccctaaatactgccccttttgca 30626685  T
Q  530 gtt 532  Q
    |||    
T  30626686 gtt 30626688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 588 - 667
Target Start/End: Original strand, 1096525 - 1096604
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgc 667  Q
    ||||||||||||||  ||||| |||||||| ||||| |||||||||||| |  || ||||||||||||||||||||||||    
T  1096525 tacttaaggggctgagttgtaatttattttgttagggggccaaaatcgccaaatcatgatacttagggggccaaaactgc 1096604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 30064002 - 30064093
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| || |||||||||||| || | ||||||||||||||||||||||||||| || |||| |||||  | ||||| |||||||||    
T  30064002 ggcttaatagaagttttggccccctatgttttaagaagttgcgattttggtcccctaactaagtaaactacaaaaccgccccttaagtattg 30064093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 431 - 525
Target Start/End: Original strand, 25423781 - 25423874
Alignment:
Q  431 taatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||| || |||||||||||| || ||| |||||||||||||| | | ||||||||||||||||||||  | | ||||||||||||||||||||    
T  25423781 taatagtagttttggccccctatgtttca-gaagttgcgatttttgcctcctaacaaaataaaatacaaaaccgtcccctaagtattgcccattt 25423874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 537 - 667
Target Start/End: Complemental strand, 33641990 - 33641860
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||| ||||||||||| ||||||| |||| | ||||||  | |||||| ||| |||| |  ||||| |||||||  |||||||| |||||||||    
T  33641990 gcattgactttgtcaaaattggtctgggggccaaaactgcaaaaaagtcaatacgtaaagggcagttttgtagtttatttagttaggaggtcaaaatcgc 33641891  T
Q  637 aatttcctgatacttagggggccaaaactgc 667  Q
    |||||| | | || || ||||||||||||||    
T  33641890 aatttcttaaaacataaggggccaaaactgc 33641860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 8143027 - 8143124
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||| ||||||| |||  ||||||| |||| || | |||||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  8143027 tttttatgcttaattgcacttttggcctcctatgttttaagaagttgcgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 8143124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 670
Target Start/End: Complemental strand, 30064141 - 30064008
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||||||||||||||||| | ||| |||| | ||||||  | ||||||||||||||| |  ||||| |||| ||  ||||| | ||||||||||    
T  30064141 gcattgacttggtcaaaattggccagagggccaaaactgcaaaaaagtcaatacttaaggggcggttttgtagtttacttagttaggggaccaaaatcgc 30064042  T
Q  637 aatttcctgatacttagggggccaaaactgctat 670  Q
    || ||| | | || ||||||||||||||| ||||    
T  30064041 aacttcttaaaacatagggggccaaaacttctat 30064008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 35830365 - 35830268
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||||||| ||||||| ||||  | ||||||||||| |||||| |||||||||  ||||||| |||||  |  ||||||||||||||    
T  35830365 tttttaggcttaatagcagttttggcctcctatatttcaagaagttgtgatttttgtcccctaaataaataaactacaaaaccaccccctaagtattg 35830268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 521
Target Start/End: Original strand, 1095754 - 1095850
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||||||||||| | ||||||||||||||||||| ||    |||||||||| || ||||||||||||| |||||  ||||||| |||||| |||||    
T  1095754 taggcttaatagctgttttggccccctaagtatcacgatcaggcgattttggccctctaacaaaataaattacaactcagccccttaagtactgccc 1095850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 13388156 - 13388251
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||| |||||||||||| || ||||||||| | |||||||| |||||||| ||||||| |||||  | ||||||||| |||||    
T  13388156 ttttaggcttaattgcagttttggccccctatgtttcaagaagtagagattttgg-cccctaactaaataaactacaaaaccgccccctaaatattg 13388251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 669
Target Start/End: Original strand, 19914975 - 19915046
Alignment:
Q  598 gctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgcta 669  Q
    |||||||||||||||||||| ||||||||  |||||| ||||||| ||||| ||||| | ||||||||||||    
T  19914975 gctggattgtattttattttattaggaggataaaatcacaatttcttgatatttaggagaccaaaactgcta 19915046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 425 - 532
Target Start/End: Complemental strand, 21552973 - 21552866
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatt 524  Q
    ||||||||||||||| ||||||  |||| || |||||||||| ||||||||  || ||||||||||| |||||||  | ||||| |||||||||| | ||    
T  21552973 taggcttaatagcagttttggcaacctatgtttcaagaagttacgattttgaccctctaacaaaatataatacaaaaccgccccttaagtattgctcctt 21552874  T
Q  525 tcgcagtt 532  Q
    | ||||||    
T  21552873 ttgcagtt 21552866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 521
Target Start/End: Complemental strand, 49804410 - 49804316
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||||||||||| |||| | ||||||  | ||||||||||||||||||| |||||||| ||||||||||||||  | |||  |||||||||||||    
T  49804410 aggcttaatagca-attttgacccctatatttcaagaagttgcgattttgatcccctaaaaaaataaaatacaaaaccgccttctaagtattgccc 49804316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 532
Target Start/End: Complemental strand, 12690126 - 12690044
Alignment:
Q  450 ctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    |||||||||| ||||||||||||||   | | ||| ||||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  12690126 ctaagtatcatgaagttgcgattttcacctcttaagaaaataaaatacaattcagccccctaagtactgctcattttgcagtt 12690044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 499
Target Start/End: Complemental strand, 30064416 - 30064342
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||| || |||||| |||||||| | ||||||||||||||||||  ||||||| ||||||| |||||    
T  30064416 taggcttaatagtagttttggctccctaagttttaagaagttgcgattttggctccctaactaaataaactacaa 30064342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 41148161 - 41148223
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||||||||| |||||||||||| || |||||||||| ||||||| | ||||||||    
T  41148161 tttaggcttaatagcagttttggccccctatgtttcaagaagttccgattttagccccctaac 41148223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 668
Target Start/End: Complemental strand, 54953860 - 54953732
Alignment:
Q  538 cattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgca 637  Q
    |||||||||||||||||||||| || |||  ||| | ||||||     | |||||||||||||| ||| ||||||||||| ||| | || ||||||||||    
T  54953860 cattgacttggtcaaaattggcatgagggctaaaactgcaaaaggagtagtacttaaggggctgaattatattttattttgttatg-ggtcaaaatcgca 54953762  T
Q  638 atttcctgatacttagggggccaaaactgct 668  Q
    | ||||| |||||||||||| ||||||||||    
T  54953761 acttcctaatacttaggggg-caaaactgct 54953732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 6033912 - 6033835
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| || || |||||||||||||||||||| || ||||| || ||||||||||  |||||||||| ||||||    
T  6033912 tttggccccatatgtttcaagaagttgcgattttggccctctaactaattaaaatacaaaacagccccctatgtattg 6033835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 426 - 507
Target Start/End: Original strand, 11787062 - 11787142
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccc 507  Q
    |||||||||||||| |||| || ||||| |||||  ||||||||||||| | ||||| |||||||||||||||||| |||||    
T  11787062 aggcttaatagcagttttgccctcctaaatatcagaaagttgcgatttt-gccccctgacaaaataaaatacaatcgagccc 11787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 427 - 513
Target Start/End: Complemental strand, 11787396 - 11787312
Alignment:
Q  427 ggcttaatagcagatttggccccctaa-gtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaag 513  Q
    ||||||||||||| |||||||   ||| ||||||  ||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  11787396 ggcttaatagcagttttggcc---taatgtatcagcaagttacgattttggcttcctaacaaaataaaatacaatccagccccctaag 11787312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 426 - 507
Target Start/End: Original strand, 11799229 - 11799309
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccc 507  Q
    |||||||||||||| |||| || ||||| |||||  ||||||||||||| | ||||| |||||||||||||||||| |||||    
T  11799229 aggcttaatagcagttttgccctcctaaatatcagaaagttgcgatttt-gccccctgacaaaataaaatacaatcgagccc 11799309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 427 - 513
Target Start/End: Complemental strand, 11799563 - 11799479
Alignment:
Q  427 ggcttaatagcagatttggccccctaa-gtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaag 513  Q
    ||||||||||||| |||||||   ||| ||||||  ||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  11799563 ggcttaatagcagttttggcc---taatgtatcagcaagttacgattttggcttcctaacaaaataaaatacaatccagccccctaag 11799479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 14816923 - 14816830
Alignment:
Q  426 aggcttaatagcagatttgg-ccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||  ||||| ||||||| || || ||||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  14816923 aggcttaattgcacttttggtccccctatgtttctagaagttgcgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 14816830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 430 - 514
Target Start/End: Original strand, 37831595 - 37831679
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagt 514  Q
    |||||||||| ||| ||||||||||| | |||||||||||||||||| ||||||| |||| ||  |||||  | |||||||||||    
T  37831595 ttaatagcagttttagccccctaagttttaagaagttgcgattttggccccctaagaaaaaaacttacaaaaccgccccctaagt 37831679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 540 - 670
Target Start/End: Original strand, 326838 - 326969
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 638  Q
    |||||| ||||||||||||| | | |||| |||||  ||||| || |  ||||||||||||||  ||||| |||||||| |||||  ||||||||||| |    
T  326838 ttgactcggtcaaaattggcgtagagggccaaagctacaaaagtggcggtacttaaggggctgagttgtaatttattttgttagggagccaaaatcgcca 326937  T
Q  639 tttcctgatacttagggggccaaaactgctat 670  Q
      |  ||||||||||| |||||||||||||||    
T  326938 aattgtgatacttaggtggccaaaactgctat 326969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 424 - 515
Target Start/End: Complemental strand, 326978 - 326887
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||| ||||||| ||||||| |||||||||||  |  | ||||||||||  ||||||||||||||| |||||  ||||||| ||||||    
T  326978 ttaggcttcatagcagttttggccacctaagtatcacaatttggcgattttggctccctaacaaaataaattacaactcagccccttaagta 326887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 459 - 521
Target Start/End: Complemental strand, 3901728 - 3901668
Alignment:
Q  459 aagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||||||||||| | ||||||| |||||||||||||| |||  ||||||||||||||||    
T  3901728 aagaagttgcgattttagccccctaataaaataaaatacaaacca--cccctaagtattgccc 3901668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 11787312 - 11787371
Alignment:
Q  590 cttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatac 649  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||| || || |||||||    
T  11787312 cttagggggctggattgtattttattttgttaggaagccaaaatcgtaacttgctgatac 11787371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 11799479 - 11799538
Alignment:
Q  590 cttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatac 649  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||| || || |||||||    
T  11799479 cttagggggctggattgtattttattttgttaggaagccaaaatcgtaacttgctgatac 11799538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 595 - 666
Target Start/End: Complemental strand, 16323058 - 16322987
Alignment:
Q  595 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 666  Q
    ||||| ||||||||||||||||| ||| | || ||||||||||| ||| | ||||||| |||||||||||||    
T  16323058 ggggccggattgtattttattttgttatggggtcaaaatcgcaacttcttaatacttaaggggccaaaactg 16322987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 426 - 485
Target Start/End: Complemental strand, 41148615 - 41148556
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    |||||||||||||| ||||||||||||  | | ||||||||| |||||||||||||||||    
T  41148615 aggcttaatagcagttttggccccctatattttaagaagttgtgattttggtcccctaac 41148556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 424 - 499
Target Start/End: Original strand, 47742228 - 47742303
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||| |||||||||| |||| || |||| || ||| |||||||||||||||| |||||||| ||||||| |||||    
T  47742228 ttaggtttaatagcagttttgtccacctatgtttcaggaagttgcgattttggccccctaactaaataaactacaa 47742303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 670
Target Start/End: Complemental strand, 1095844 - 1095762
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||||||||  ||||| |||||||| ||||  ||||||||||||    || ||||||||||||||||||||| |||||    
T  1095844 tacttaaggggctgagttgtaatttattttgttagagggccaaaatcgcctgatcgtgatacttagggggccaaaacagctat 1095762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 532
Target Start/End: Complemental strand, 15845206 - 15845136
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||| | |||||| ||| | ||| ||||||    
T  15845206 aagttacgattttgatcctctaacaaaataaaatacaatccagcctcgtaagtactgctccttttgcagtt 15845136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 25423848 - 25423783
Alignment:
Q  604 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||||||| ||||||||| |||||||||| || |||| || ||||||||||||||| ||||    
T  25423848 ttgtattttattttgttaggaggcaaaaatcgcaactt-ctgaaacatagggggccaaaactactat 25423783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 499
Target Start/End: Complemental strand, 35393989 - 35393911
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||||||||| |||  |||||||| | ||| |||||||||||||||| || |||| |||| ||| |||||    
T  35393989 tttttaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggacctctaagaaaaaaaactacaa 35393911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 52865374 - 52865476
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||| ||| |||||||||| ||  ||||| ||||| | ||||||||||||||||||||| |||| |||| ||| ||||   | ||||||||||| |||||    
T  52865374 ttttaaggtttaatagcagtttcagccccataagttttaagaagttgcgattttggtcctctaagaaaaaaaactacagaaccgccccctaagttttgcc 52865473  T
Q  521 cat 523  Q
    |||    
T  52865474 cat 52865476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 445 - 515
Target Start/End: Original strand, 54953741 - 54953810
Alignment:
Q  445 gccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||||||||| | |||||||||||||| | ||| ||||||||||||||| ||| ||||||| ||||||    
T  54953741 gccccctaagtattaggaagttgcgatttt-gacccataacaaaataaaatataattcagccccttaagta 54953810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 511
Target Start/End: Original strand, 1186657 - 1186742
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccccta 511  Q
    ||||||||| |||  ||||||||||||| | |  | ||||||||||||||| |||||||| || ||||||||||  ||||||||||    
T  1186657 aggcttaattgcacttttggccccctaactttttaaaagttgcgattttggccccctaactaattaaaatacaaaacagcccccta 1186742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 666
Target Start/End: Complemental strand, 5303842 - 5303781
Alignment:
Q  605 tgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 666  Q
    |||| |||||||| ||| | || ||||||||||| |||||||||||||||||| ||||||||    
T  5303842 tgtaatttattttgttaaggggtcaaaatcgcaacttcctgatacttagggggacaaaactg 5303781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 498
Target Start/End: Original strand, 5303785 - 5303842
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaataca 498  Q
    |||| |||||||||||||| |||||||||||||||  ||| |||||||||||| ||||    
T  5303785 tttgtccccctaagtatcaggaagttgcgattttgaccccttaacaaaataaattaca 5303842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 31761902 - 31761825
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||  | |||||||||| ||||||||| |||||||| || ||||||| ||  |||||||||| ||||||    
T  31761902 tttggccccctatatttcaagaagttacgattttggccccctaactaattaaaatagaaaacagccccctatgtattg 31761825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 26858379 - 26858435
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||||||| || ||||||||||  ||||| |||| ||||||    
T  26858379 aagttgcgattttggtcccctaactaattaaaatacaaaacagcctcctatgtattg 26858435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 594 - 670
Target Start/End: Original strand, 30627005 - 30627081
Alignment:
Q  594 aggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||| ||||||||||||||| ||| | || |||||||| || ||  ||||||||||||||  |||||||||||    
T  30627005 aggggctgaattgtattttattttgttatggggtcaaaatcgtaactttttgatacttagggggtgaaaactgctat 30627081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 461 - 513
Target Start/End: Complemental strand, 33122898 - 33122846
Alignment:
Q  461 gaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaag 513  Q
    ||||||||||||||| ||||| ||||||||||||||||||  |||| ||||||    
T  33122898 gaagttgcgattttgatccccaaacaaaataaaatacaatttagcctcctaag 33122846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 614 - 670
Target Start/End: Complemental strand, 37831654 - 37831598
Alignment:
Q  614 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||| |||||||||||||| ||| | | ||||||||||| |||||||||||    
T  37831654 ttttcttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctat 37831598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 50073574 - 50073518
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||| ||||| || ||||||||||  |||||||||| ||||||    
T  50073574 aagttgcgattttggtcctctaactaattaaaatacaaaacagccccctatgtattg 50073518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 53578974 - 53578922
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgatttt 474  Q
    |||||||||||||||| | |||||||||||| || | ||||||||||||||||    
T  53578974 ttttaggcttaatagccgttttggccccctatgttttaagaagttgcgatttt 53578922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 427 - 499
Target Start/End: Original strand, 55038153 - 55038225
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||| ||| |||| |||||||||||||| ||  |||||||||| |||||  ||||||||||| |||||    
T  55038153 ggcttaataacagttttgaccccctaagtatcacgatcttgcgattttagtccctgaacaaaataaattacaa 55038225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 55318099 - 55318003
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||| |||||||| |||  |||||||||||| || | |||||||| ||||||| ||||| |||| || ||||||| ||  |||||||||| ||||||    
T  55318099 tttttggcttaattgcacttttggccccctatgttttaagaagttacgattttagtcccataactaattaaaatataaaacagccccctatgtattg 55318003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 430 - 503
Target Start/End: Complemental strand, 5234862 - 5234792
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatcca 503  Q
    |||||||||| |||||||| |||| ||| |||||||| | |||||    |||||||||||||||||||||||||    
T  5234862 ttaatagcagttttggccctctaaatattaagaagttacaattttt---ccctaacaaaataaaatacaatcca 5234792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 489
Target Start/End: Original strand, 35383764 - 35383827
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||||||| ||| ||||||||| | ||| ||||||| |||||||| ||||||| ||||    
T  35383764 aggcttaatagcagttttcgccccctaactttcacgaagttgtgattttggccccctaaaaaaa 35383827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 520
Target Start/End: Complemental strand, 48188359 - 48188312
Alignment:
Q  473 ttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||| ||||||||||||||||||||||| ||||||| |||||| ||||    
T  48188359 ttggccccctaacaaaataaaatacaattcagccccttaagtactgcc 48188312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 604 - 670
Target Start/End: Original strand, 5547995 - 5548061
Alignment:
Q  604 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| |||||||  |||||||||||||||||||| ||| | | || |||| |||||||||||||||    
T  5547995 ttgtagtttatttaattaggaggccaaaatcgcaacttcttaaaacataggaggccaaaactgctat 5548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 670
Target Start/End: Complemental strand, 11787142 - 11787069
Alignment:
Q  596 gggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| |||||||||||||||| | ||| ||| |||||||||| || |||||| ||||| || ||||||||||||    
T  11787142 gggctcgattgtattttattttgtcagggggc-aaaatcgcaactttctgatatttaggagggcaaaactgctat 11787069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 670
Target Start/End: Complemental strand, 11799309 - 11799236
Alignment:
Q  596 gggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| |||||||||||||||| | ||| ||| |||||||||| || |||||| ||||| || ||||||||||||    
T  11799309 gggctcgattgtattttattttgtcagggggc-aaaatcgcaactttctgatatttaggagggcaaaactgctat 11799236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 499
Target Start/End: Original strand, 44271440 - 44271498
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||  | |||| |||||| ||||||||||||||||| || ||||||||||    
T  44271440 tttggccccctatatttcaataagttgtgattttggtcccctaactaattaaaatacaa 44271498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 47742303 - 47742237
Alignment:
Q  604 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| |||||||  ||||| |||||||||||||| ||||||| || |||| || ||||||||||||    
T  47742303 ttgtagtttatttagttagggggccaaaatcgcaacttcctgaaacataggtggacaaaactgctat 47742237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 588 - 630
Target Start/End: Original strand, 48188317 - 48188359
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaa 630  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||    
T  48188317 tacttaaggggctgaattgtattttattttgttagggggccaa 48188359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 568
Target Start/End: Complemental strand, 53578720 - 53578686
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc 568  Q
    |||||||||||||||||||||||||||| ||||||    
T  53578720 tcagcattgacttggtcaaaattggcctagggggc 53578686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 422 - 499
Target Start/End: Original strand, 1139151 - 1139228
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||| ||||||| |||  |||| ||||||| |  |||||||||||||||||| | |||||||| || ||||||||||    
T  1139151 ttttaagcttaattgcacttttgaccccctatggttcaagaagttgcgatttttgccccctaactaattaaaatacaa 1139228  T

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Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 430 - 499
Target Start/End: Complemental strand, 5548064 - 5547995
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||| ||||||| |||| || | |||||||||||||||||| | |||||  ||||||| |||||    
T  5548064 ttaatagcagttttggcctcctatgttttaagaagttgcgattttggcctcctaattaaataaactacaa 5547995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 670
Target Start/End: Original strand, 21552833 - 21552965
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||| |||||||||||| |||||  |||| | ||||||    ||||||||||||||| |  ||||||| |||||| ||||  || ||||||||     
T  21552833 gcattgactttgtcaaaattggcttggggc-caaaactgcaaaaggagcaatacttaaggggcggttttgtattatattttgttagagggtcaaaatcgt 21552931  T
Q  637 aatttcctgatacttagggggccaaaactgctat 670  Q
    || ||| ||| || ||||  ||||||||||||||    
T  21552932 aacttcttgaaacataggttgccaaaactgctat 21552965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 519
Target Start/End: Complemental strand, 29697836 - 29697744
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||||||||||| |||  || ||||| | ||| ||||||||||||||||| |||||| |||| ||| ||||| || | ||||||||| ||||    
T  29697836 aggcttaatagcagttttcacctcctaactttcatgaagttgcgattttggt-ccctaagaaaaaaaactacaaacccgtcccctaagttttgc 29697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 38828506 - 38828599
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| |||  |||||||| ||| || | |||||||||||||||||| | | |||| || ||||||||||  ||||| |||| ||||||    
T  38828506 taggcttaattgcacttttggccctctatgttttaagaagttgcgattttggactcataactaattaaaatacaaaacagcctcctatgtattg 38828599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 65; Significance: 4e-28; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 426 - 534
Target Start/End: Original strand, 37783 - 37890
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||||| ||||| ||| ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||| |||    
T  37783 aggcttaacagcagttttagccccctaagtatcaggaagttgcgattttga-cccctaacaaaataaaatacaatttagccccctaagtattgccctttt 37881  T
Q  526 cgcagttat 534  Q
     ||||||||    
T  37882 tgcagttat 37890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 585 - 668
Target Start/End: Complemental strand, 37874 - 37792
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgct 668  Q
    ||||||||| ||||||  ||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||| |||||||||    
T  37874 caatacttagggggctaaattgtattttattttgttagg-ggtcaaaatcgcaacttcctgatacttagggggctaaaactgct 37792  T

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Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 421 - 530
Target Start/End: Original strand, 38498113 - 38498222
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||||||||||||||||| |||| || ||||||||||| |||||||| ||||| | ||||||| ||||||||||||||| |||||||||||||| | ||    
T  38498113 tttttaggcttaatagcagttttgaccacctaagtatcaggaagttgcaattttcgccccctaaaaaaataaaatacaattcagccccctaagtactacc 38498212  T
Q  521 catttcgcag 530  Q
    ||||| ||||    
T  38498213 cattttgcag 38498222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 424 - 518
Target Start/End: Complemental strand, 6464392 - 6464298
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||| ||||||| |||||  | |||||||||||||||    
T  6464392 ttaggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaactaaataaactacaaaaccgccccctaagtattg 6464298  T

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Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 670
Target Start/End: Original strand, 6464246 - 6464383
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    ||||| ||||||||||||||||||||||| ||||| ||| | ||||||  | ||||||||| ||||| |  ||||| |||||||  ||||| ||||||||    
T  6464246 tcagctttgacttggtcaaaattggcctgaggggccaaaactgcaaaaaagtcaatacttagggggcggttttgtagtttatttagttagggggccaaaa 6464345  T
Q  633 tcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| ||| ||| || ||||||||||||||||||||    
T  6464346 tcgcaacttcttgaaacatagggggccaaaactgctat 6464383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 532
Target Start/End: Original strand, 36501424 - 36501504
Alignment:
Q  451 taagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||| ||||||    
T  36501424 taagtatcaggaagttgcgattttggtcccctaacaaaataaaatacaat-cagccccctaactactgccccttttgcagtt 36501504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 536 - 668
Target Start/End: Original strand, 22408720 - 22408852
Alignment:
Q  536 agcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    ||||||||||||||||||||||| ||||||| |||| | ||||||  | || |||| | ||| ||||||||||||||||||| ||||| || ||||||||    
T  22408720 agcattgacttggtcaaaattggtctgggggccaaaactgcaaaagggacagtactaaggggactggattgtattttattttgttagggggtcaaaatcg 22408819  T
Q  636 caatttcctgatacttagggggccaaaactgct 668  Q
    ||| ||||||| |   ||||| |||||||||||    
T  22408820 caacttcctgacaggcaggggaccaaaactgct 22408852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 424 - 518
Target Start/End: Original strand, 36361030 - 36361124
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| |||| ||||| |||||| || ||||||||||||||||||| ||||||||| ||||||| |||||  | |||||||||||||||    
T  36361030 ttaggcttaattgcagttttggtcccctatgtttcaagaagttgcgattttgatcccctaactaaataaagtacaaaaccgccccctaagtattg 36361124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 20364679 - 20364748
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaa 493  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  20364679 ttaggcttaatagcagttttgtccccctaagtatcaggaagttgcgattttgaccccctaacaaaataaa 20364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 670
Target Start/End: Complemental strand, 20987087 - 20986952
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||||||||||| ||||||||||| |||| |  |||| | |||||||  ||| |||||| ||||||| ||||||||| ||||| |||||||  ||||||    
T  20987087 tcagcattgacttagtcaaaattggtctggagt-caaaactgcaaaataaccagtacttagggggctgaattgtatttaattttgttaggagatcaaaat 20986989  T
Q  634 cgcaatttcctgatacttagggggccaaaactgctat 670  Q
    | ||| || ||||||||||| ||| ||||||||||||    
T  20986988 cacaactttctgatacttagagggtcaaaactgctat 20986952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 422 - 521
Target Start/End: Original strand, 11167868 - 11167967
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||||||||||||| || |||| |||| |||||||||  || ||| |||||||| ||||||| |||||||| ||||| ||||||| |||||||||||||    
T  11167868 ttttaggcttaatagtagttttgaccccttaagtatcacaaacttgtgattttggccccctaagaaaataaattacaacccagccctctaagtattgccc 11167967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 520
Target Start/End: Original strand, 12166799 - 12166898
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||||||| |||||||||| |||| | |||||| ||||| ||| |||| ||||| | |||||||||||||||||||||||||||| |||| |||| ||||    
T  12166799 tttttaggtttaatagcaggtttgacaccctaaatatcatgaaattgcaattttagccccctaacaaaataaaatacaatccagctccctgagtactgcc 12166898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 425 - 532
Target Start/End: Original strand, 20126436 - 20126543
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatt 524  Q
    |||||||||||| || |||||||||||| || ||||||||||| |||||||  |||||||| ||||||| |||||  | ||||||||||||||| | |||    
T  20126436 taggcttaataggagttttggccccctatgtttcaagaagttgtgattttgaccccctaactaaataaactacaaaaccgccccctaagtattgactatt 20126535  T
Q  525 tcgcagtt 532  Q
    | ||||||    
T  20126536 ttgcagtt 20126543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 532
Target Start/End: Complemental strand, 22408866 - 22408755
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||||||||||| ||||| ||||| |||||   | ||| |||||||||||||||  ||||||||||||||||||||||||||| ||||| |||| || |    
T  22408866 tttttaggcttaaaagcagttttggtcccctgcctgtcaggaagttgcgattttgaccccctaacaaaataaaatacaatccagtccccttagtactgtc 22408767  T
Q  521 catttcgcagtt 532  Q
    | ||| ||||||    
T  22408766 ccttttgcagtt 22408755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 423 - 518
Target Start/End: Original strand, 38162589 - 38162684
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||| |||  |||||||||||| || ||||||||||| |||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  38162589 tttaggcttaattgcacttttggccccctatgtttcaagaagttgtgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 38162684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 20986944 - 20987034
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||| |||||||||| |||| ||| ||||||||||  |||||| ||||||| || ||||||||||| ||||||||| ||||||||||||||    
T  20986944 taggtttaatagcagttttgaccctctaagtatcagaaagttgtgattttgatctcctaacaaaattaaatacaattcagccccctaagta 20987034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 588 - 670
Target Start/End: Complemental strand, 38498207 - 38498125
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| ||||||| ||||||||||||||| ||||| ||| ||||| |||| ||||||||||||||| || ||||||||||||    
T  38498207 tacttagggggctgaattgtattttatttttttagggggcgaaaattgcaacttcctgatacttaggtggtcaaaactgctat 38498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 538 - 670
Target Start/End: Complemental strand, 12166944 - 12166811
Alignment:
Q  538 cattgacttggtcaaaattggcctggggggcaaag-cagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||||||||||||||| || ||||||||  | ||||||  | || |||| | || |||||||||||||||||||| ||||| ||| ||||| ||    
T  12166944 cattgacttggtcaaaattggcttgaggggcaaaaactgcaaaagaggcagtactcagggagctggattgtattttattttgttagggggctaaaattgc 12166845  T
Q  637 aatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| ||||| |||||| | |||| |||||||    
T  12166844 aatttcatgatatttagggtgtcaaacctgctat 12166811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 424 - 520
Target Start/End: Complemental strand, 12167181 - 12167085
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||| |||||||||| | || |||| ||||||| || |||||   ||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  12167181 ttaggtttaatagcagttctgcccccataagtattaaaaagttataattttggtcccttaacaaaataaaatacaatccagcaccctaagtactgcc 12167085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 429 - 501
Target Start/End: Complemental strand, 37426765 - 37426694
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatc 501  Q
    ||||||||||| |||||||||||||||||||  ||||||| ||||| | ||||||||||||||||||||||||    
T  37426765 cttaatagcagttttggccccctaagtatcagaaagttgcaattttag-cccctaacaaaataaaatacaatc 37426694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 667
Target Start/End: Complemental strand, 36361175 - 36361042
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||| |||||||||||||||||||| |||||| |||| | ||||||  | ||||||||| ||||| |  ||||| |||||||  ||||| |  ||||||    
T  36361175 tcagctttgacttggtcaaaattggcatgggggccaaaactgcaaaaaagtcaatacttagggggcggttttgtactttatttagttaggggatcaaaat 36361076  T
Q  634 cgcaatttcctgatacttagggggccaaaactgc 667  Q
    ||||| ||| ||| || |||||| ||||||||||    
T  36361075 cgcaacttcttgaaacataggggaccaaaactgc 36361042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 20126740 - 20126641
Alignment:
Q  421 tttttaggcttaatagcagatttggccccc--taagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||| || ||||||||||  || || | |||||||||||||||||  |||||||| ||||||| |||||  | |||||||||||||||    
T  20126740 tttttaggcttaataggagttttggccccccctatgttttaagaagttgcgattttgaccccctaactaaataaactacaaaaccgccccctaagtattg 20126641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 610 - 670
Target Start/End: Complemental strand, 20364748 - 20364688
Alignment:
Q  610 tttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||| ||||| || ||||||||||| |||||||||||||||||| ||||||||||||    
T  20364748 tttattttgttagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctat 20364688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 441 - 521
Target Start/End: Complemental strand, 34969197 - 34969117
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||| ||| || | |||||||||||||||||| ||| |||||||||| |||||||  | ||||||||||||||||||    
T  34969197 tttggccctctatgttttaagaagttgcgattttggacccataacaaaatataatacaaaaccgccccctaagtattgccc 34969117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 37426694 - 37426761
Alignment:
Q  602 gattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||||||||| ||||| ||| ||||| |||| || ||||||||||||||||||||||||||||    
T  37426694 gattgtattttattttgttagg-ggctaaaattgcaactttctgatacttagggggccaaaactgctat 37426761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 42585984 - 42586044
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||  ||||||||    
T  42585984 taggcttaatagcagttttggccccctatgtttcaagaagttgcgattttgaccccctaac 42586044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 28769751 - 28769818
Alignment:
Q  465 ttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||||||||||  |||||||||||||||||||||  | |||| ||||||||||||||||| ||||||    
T  28769751 ttgcgattttggctccctaacaaaataaaatacaaaaccgccctctaagtattgcccattttgcagtt 28769818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 451 - 518
Target Start/End: Complemental strand, 36628716 - 36628649
Alignment:
Q  451 taagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||| | |||||||| ||||||||||||||| ||||||||||| |||| |||||| |||||||||    
T  36628716 taagtattaggaagttgcaattttggtcccctaataaaataaaatataatctagccccttaagtattg 36628649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 670
Target Start/End: Complemental strand, 11168008 - 11167879
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaat 639  Q
    |||||| |||||||||||| ||||||  ||||   ||||||  | |||||||||  ||||||| ||||| |||||||||||||| |||||||||| |||     
T  11168008 ttgactcggtcaaaattggtctggggc-caaaattgcaaaaggggcaatacttagagggctgggttgtaatttattttcttagggggccaaaatcacaag 11167910  T
Q  640 ttcctgatacttagggggccaaaactgctat 670  Q
    ||  ||||||||| |||| ||||||| ||||    
T  11167909 tttgtgatacttaaggggtcaaaactactat 11167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 426 - 499
Target Start/End: Original strand, 128253 - 128326
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||| |||| ||||||| || |||||||||||| ||||||||||  | |||||||||| |||||    
T  128253 aggcttaatagcagttttgaccccctatgtttcaagaagttgcaattttggtccttttacaaaataaattacaa 128326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 422 - 481
Target Start/End: Complemental strand, 2974953 - 2974894
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccc 481  Q
    |||||||||||||||||| ||| ||||||||| | ||| |||||||||||||||| ||||    
T  2974953 ttttaggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggccccc 2974894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 585 - 652
Target Start/End: Original strand, 36628649 - 36628716
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatactta 652  Q
    |||||||||||||||| |||| ||||||||||| ||||| | ||||||| |||| ||||| |||||||    
T  36628649 caatacttaaggggctagattatattttattttattaggggaccaaaattgcaacttcctaatactta 36628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 670
Target Start/End: Original strand, 38944178 - 38944241
Alignment:
Q  607 tattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||||| ||| ||||||| ||| |||| ||||| ||||||| |||||||||||||||||    
T  38944178 tattttattttgttaagaggccataattgcaacttcctaatacttaaggggccaaaactgctat 38944241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 430 - 532
Target Start/End: Complemental strand, 33087912 - 33087810
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgca 529  Q
    |||||||||  |||||  |||||||||||| | |||||| |||||   ||||||||||||||||||| ||| |||||| ||||||| | ||| ||| |||    
T  33087912 ttaatagcaattttggttccctaagtatcaggtagttgcaattttatacccctaacaaaataaaatataattcagccctctaagtacttccccttttgca 33087813  T
Q  530 gtt 532  Q
    |||    
T  33087812 gtt 33087810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 424 - 489
Target Start/End: Complemental strand, 35166610 - 35166544
Alignment:
Q  424 ttaggcttaatagcagatttggccccc-taagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||||||||| ||| |||||| ||| | ||| |||||||||||||||||||||||| ||||    
T  35166610 ttaggcttaatagcagttttcgcccccctaactttcacgaagttgcgattttggtcccctaagaaaa 35166544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 602 - 652
Target Start/End: Complemental strand, 36501474 - 36501424
Alignment:
Q  602 gattgtattttattttcttaggaggccaaaatcgcaatttcctgatactta 652  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||||||||    
T  36501474 gattgtattttattttgttaggggaccaaaatcgcaacttcctgatactta 36501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 26366124 - 26366048
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||| || ||||||||||| |||||||| |||||||| || ||||||||||  |||||| ||| ||||||    
T  26366124 tttggccccctatgtttcaagaagttgtgattttgg-cccctaactaattaaaatacaaaacagccctctatgtattg 26366048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 641
Target Start/End: Complemental strand, 28769849 - 28769748
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaat 639  Q
    ||||||| |||||||||  | |||||| |||| | ||||||| | |||||||||  |||| |  |||||||||||||| |||||  ||||||||||||||    
T  28769849 ttgactttgtcaaaatttacgtgggggccaaaactgcaaaatgggcaatacttagagggcggttttgtattttattttgttagggagccaaaatcgcaat 28769750  T
Q  640 tt 641  Q
    ||    
T  28769749 tt 28769748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 519
Target Start/End: Complemental strand, 36798491 - 36798398
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||||||||||| ||| ||||||||| | ||   ||||||||||||||||||||||| |||| ||| | |||  | ||||||||||| ||||    
T  36798491 aggcttaatagcagttttagccccctaactttctcaaagttgcgattttggtcccctaagaaaaaaaactgcaaaaccgccccctaagttttgc 36798398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 663
Target Start/End: Original strand, 38498261 - 38498306
Alignment:
Q  618 cttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 663  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||    
T  38498261 cttagggggccaaaatcgcaacttcctgatatttagggggccaaaa 38498306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 4146142 - 4146198
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  4146142 aagttgcgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 4146198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 632
Target Start/End: Complemental strand, 6464079 - 6463983
Alignment:
Q  537 gcattgacttggtcaaaattggcctgggggg-caaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||||||||||||||||||||| |||||| |||| | ||||||  | ||||||||| ||||| |  ||||| |||||||  ||||| ||||||||    
T  6464079 gcattgacttggtcaaaattggccaggggggacaaaactgcaaaaaagtcaatacttagggggcggttttgtagtttatttagttagggggccaaaa 6463983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 496
Target Start/End: Complemental strand, 38944246 - 38944178
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaata 496  Q
    |||||||||||| ||||||||| ||||||| | |||||||| ||| ||| | | |||||||||||||||    
T  38944246 gcttaatagcagttttggccccttaagtattaggaagttgcaattatggcctcttaacaaaataaaata 38944178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 457 - 532
Target Start/End: Complemental strand, 42169450 - 42169374
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccct-aagtattgcccatttcgcagtt 532  Q
    |||||||||||||||||| | ||||||||||| ||||||||||  | || |||| ||||||||||| ||| ||||||    
T  42169450 tcaagaagttgcgattttagccccctaacaaattaaaatacaaaaccgctccctaaagtattgccccttttgcagtt 42169374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 3333695 - 3333754
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||| ||| ||||||||| | ||| ||||||||||||||| |||||||| ||||    
T  3333695 ttaatagcagttttcgccccctaactttcatgaagttgcgattttgatcccctaagaaaa 3333754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 519
Target Start/End: Original strand, 12406038 - 12406133
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||||||||||||| ||| ||||||||| | ||   ||||||||||||||| ||||||| |||  ||| |||||  | ||||||||||| ||||    
T  12406038 ttaggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaagaaaactacaaaaccgccccctaagttttgc 12406133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 509
Target Start/End: Complemental strand, 16039779 - 16039732
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccc 509  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||||    
T  16039779 aagttgcgattttggtcccctaactaattaaaatacaaaacagccccc 16039732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 475
Target Start/End: Original strand, 20369397 - 20369448
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttg 475  Q
    |||||||||||||||| |||| ||| ||||||||||  ||||||||||||||    
T  20369397 ttaggcttaatagcagttttgtcccgctaagtatcagaaagttgcgattttg 20369448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 656
Target Start/End: Original strand, 36501697 - 36501820
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||| |||| ||||||||||||| | |||||  |||| | ||||||  |  | ||||||| ||||| |||| ||||||||||  |||||||  |||||    
T  36501697 atcagcgttgaattggtcaaaattgacatggggatcaaaactgcaaaagggatactacttaaagggctagattatattttatttcgttaggagatcaaaa 36501796  T
Q  633 tcgcaatttcctgatacttagggg 656  Q
    || ||| ||||||||| |||||||    
T  36501797 tcacaacttcctgataattagggg 36501820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 518
Target Start/End: Complemental strand, 37060211 - 37060120
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  ||||||||||||  | || | ||||||| ||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  37060211 ggcttaattgcacttttggccccctatctttccaaaagttgcaattttggacccctaactaattaaaatacaaaacagccccctatgtattg 37060120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 518
Target Start/End: Complemental strand, 38163697 - 38163638
Alignment:
Q  459 aagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||| |||||||| || ||||||||||  ||||| |||| ||||||    
T  38163697 aagaagttgcgattttggccccctaactaattaaaatacaaaacagcctcctatgtattg 38163638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 484
Target Start/End: Complemental strand, 38498305 - 38498262
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaa 484  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||    
T  38498305 tttggccccctaaatatcaggaagttgcgattttggccccctaa 38498262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 430 - 532
Target Start/End: Original strand, 42169087 - 42169190
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac-aaaataaaatacaatccagccccctaagtattgcccatttcgc 528  Q
    ||||||| || ||||||||||||||||| |  ||||||| ||||||  |||||| | ||||||||||| ||    |||||||||||||||||| ||| ||    
T  42169087 ttaatagtagttttggccccctaagtattagaaagttgcaattttgaacccctagcaaaaataaaatataaaattgccccctaagtattgccccttttgc 42169186  T
Q  529 agtt 532  Q
    ||||    
T  42169187 agtt 42169190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 485
Target Start/End: Complemental strand, 42586402 - 42586343
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    |||||||||||||| |||||||||| | || |  ||||||||||||||||| ||||||||    
T  42586402 aggcttaatagcagttttggccccccatgtttacagaagttgcgattttggccccctaac 42586343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 20126574 - 20126444
Alignment:
Q  541 tgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaat 639  Q
    |||||| |||||||||||  || ||||| ||| | ||||||| | ||||||||| ||||| |  ||||| |||||||  ||||| || ||||||| |||     
T  20126574 tgactttgtcaaaattggtttgaggggccaaaactgcaaaatagtcaatacttagggggcggttttgtagtttatttagttagggggtcaaaatcacaac 20126475  T
Q  640 ttcctgatacttagggggccaaaactgctat 670  Q
    ||| ||| || ||||||||||||||| ||||    
T  20126474 ttcttgaaacatagggggccaaaactcctat 20126444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 489
Target Start/End: Complemental strand, 36898696 - 36898642
Alignment:
Q  436 gcagatttggccccctaagtatcaagaagttgcgattttggtc-ccctaacaaaa 489  Q
    ||||||||| |||||||||||| || ||||||||||||||| | |||||||||||    
T  36898696 gcagatttgaccccctaagtattaaaaagttgcgattttggcctccctaacaaaa 36898642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 499
Target Start/End: Original strand, 10169050 - 10169087
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||||||||||||| || ||||||||||    
T  10169050 aagttgcgattttggtcccctaactaattaaaatacaa 10169087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 632
Target Start/End: Original strand, 11168130 - 11168223
Alignment:
Q  540 ttgacttggtcaaaattggcctgggggg-caaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||||||||||||||||| ||||||| ||||   ||||||  | |||||||| ||||||||  ||||| |||||||| ||||| || |||||    
T  11168130 ttgacttggtcaaaattggcttggggggccaaaattgcaaaaggggcaatacttcaggggctgagttgtaatttattttgttagggggtcaaaa 11168223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 430 - 499
Target Start/End: Complemental strand, 13428188 - 13428120
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||| ||||||||||||  | | |||||||||| ||||| | ||||||||||| ||||||||||    
T  13428188 ttaatagcagttttggccccctatattttaagaagttgcaatttt-gacccctaacaaagtaaaatacaa 13428120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 494
Target Start/End: Original strand, 33087582 - 33087647
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaa 494  Q
    ||||||||||| |||| ||| |||| ||||| |||||||||||||||  |  ||||||||||||||    
T  33087582 cttaatagcagttttgaccctctaaatatcatgaagttgcgattttgaccttctaacaaaataaaa 33087647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 670
Target Start/End: Complemental strand, 33087647 - 33087586
Alignment:
Q  609 ttttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||| |||| ||| ||||||||||| ||| ||||| |||| ||| ||||||||||||    
T  33087647 ttttattttgttagaaggtcaaaatcgcaacttcatgatatttagagggtcaaaactgctat 33087586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 665
Target Start/End: Complemental strand, 37426500 - 37426423
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaact 665  Q
    ||||||||| |||| ||||||||||||||| ||| |||| |||| |||||| || || ||||||| | ||| ||||||    
T  37426500 tacttaaggagctgaattgtattttattttgttaagaggtcaaagtcgcaactttctaatacttatgaggcaaaaact 37426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 512
Target Start/End: Complemental strand, 23993977 - 23993888
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaa 512  Q
    |||||| |||||||||| |||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  23993977 tttaggtttaatagcagttttggctccctaagtattaagaagttgcaattttggccccctaacaaaataaaatacaatccagcctcctaa 23993888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 532
Target Start/End: Complemental strand, 35500411 - 35500300
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||||||||||||||| || |||||  ||||| || |||||||||||||||||||| ||||||||||||||||||||||  | ||||| |||||||||||    
T  35500411 tttttaggcttaatagtagttttggggccctatgtttcaagaagttgcgattttggccccctaacaaaataaaatacaaaaccgccccttaagtattgcc 35500312  T
Q  521 catttcgcagtt 532  Q
    | ||| ||||||    
T  35500311 ccttttgcagtt 35500300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 14816113 - 14816020
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||| ||||||| |||||  | |||||||||||||||    
T  14816113 taggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaactaaataaactacaaaaccgccccctaagtattg 14816020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 536 - 670
Target Start/End: Complemental strand, 31226991 - 31226857
Alignment:
Q  536 agcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcg 635  Q
    |||||||||||||||||||||||| |||||| |||| | ||||||  |  | |||||| |||| | |||||||||||||||| |||   |||||| |||     
T  31226991 agcattgacttggtcaaaattggcatgggggtcaaaactgcaaaaggggtagtacttagggggtttgattgtattttattttgttacagggccaagatct 31226892  T
Q  636 caatttcctgatacttagggggccaaaactgctat 670  Q
    ||| || ||||||||||||||||||||||||||||    
T  31226891 caactttctgatacttagggggccaaaactgctat 31226857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 14815698 - 14815789
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||||||||||| || ||||||||||||| |||||||||| |||| ||||||| |||||  | |||||||||||||||    
T  14815698 ggcttaatagcagttttggccccctatgtttcaagaagttgcggttttggtcccttaactaaataaactacaaaaccgccccctaagtattg 14815789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 426 - 520
Target Start/End: Original strand, 14289265 - 14289358
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||||||||||||| |||  || ||||||||||| |||||||||||||||| |||||||||||||||||||||||  |||||| |||||| ||||    
T  14289265 aggcttaatagcagttttt-cctcctaagtatcatgaagttgcgattttggccccctaacaaaataaaatacaatttagccccttaagtactgcc 14289358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 585 - 670
Target Start/End: Original strand, 31227111 - 31227196
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||| |||||| ||||||||||||||| ||||  || ||||||||||| ||||||||| ||||| |||||||||||||||    
T  31227111 caatacttaaagggctgtattgtattttattttgttagagggtcaaaatcgcaacttcctgatatttaggaggccaaaactgctat 31227196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 430 - 518
Target Start/End: Complemental strand, 31227199 - 31227111
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| ||||||| ||||| ||||| |||||||||||||||  || |||||||||||||||||||| ||||||  |||||||||    
T  31227199 ttaatagcagttttggcctcctaaatatcaggaagttgcgattttgaccctctaacaaaataaaatacaatacagccctttaagtattg 31227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 547 - 654
Target Start/End: Complemental strand, 14289394 - 14289287
Alignment:
Q  547 ggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctga 646  Q
    ||||||||||||||| || | |||| | ||||||  | || |||||||||||||  ||||||||||||||| ||||| |||||||||||||| ||| |||    
T  14289394 ggtcaaaattggcctaggagccaaaactgcaaaagaggcagtacttaaggggctaaattgtattttattttgttagggggccaaaatcgcaacttcatga 14289295  T
Q  647 tacttagg 654  Q
    ||||||||    
T  14289294 tacttagg 14289287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 426 - 525
Target Start/End: Original strand, 35500039 - 35500138
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    |||||||||||||| |||||||||||| || |||| |||||| ||||| |  || |||||||||||||||||||  | ||||||||||||||| ||||||    
T  35500039 aggcttaatagcagttttggccccctatgtttcaaaaagttgtgatttcgacccactaacaaaataaaatacaaaaccgccccctaagtattgtccattt 35500138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 422 - 508
Target Start/End: Original strand, 10522638 - 10522724
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccc 508  Q
    |||| ||||||||||||| ||| |  || ||||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||||    
T  10522638 tttttggcttaatagcagtttttggtccttaagtatcaagaagttgtgattttggtccactaataaaataaaatacaatgcagcccc 10522724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 535 - 636
Target Start/End: Original strand, 13491728 - 13491829
Alignment:
Q  535 cagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||||| |||||||||||||||||||| ||||| ||| | ||||||| || |||||||| |||| |||||||||||||||||| ||| | |||||||||    
T  13491728 cagcatttacttggtcaaaattggcctgaggggccaaaactgcaaaatggc-aatacttagggggatggattgtattttattttgttaaggggccaaaat 13491826  T
Q  634 cgc 636  Q
    |||    
T  13491827 cgc 13491829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 430 - 532
Target Start/End: Original strand, 29370719 - 29370821
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgca 529  Q
    ||||||| || |||||||||||| || | ||||||||||||||||| |||||| ||||||||||||||||  | ||||| |||||| ||||| ||| |||    
T  29370719 ttaatagaagttttggccccctatgttttaagaagttgcgattttgatcccctgacaaaataaaatacaaaactgccccttaagtactgccccttttgca 29370818  T
Q  530 gtt 532  Q
    |||    
T  29370819 gtt 29370821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 537 - 670
Target Start/End: Complemental strand, 14815837 - 14815704
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    ||||||||||||||||||||||| |||||| |||||| |||| |  | ||||||||| ||||| |  ||||| |||||||  ||| | | |||||| |||    
T  14815837 gcattgacttggtcaaaattggcatgggggccaaagctgcaataaagtcaatacttagggggcggttttgtagtttatttagttaagggaccaaaaccgc 14815738  T
Q  637 aatttcctgatacttagggggccaaaactgctat 670  Q
    || ||| ||| || ||||||||||||||||||||    
T  14815737 aacttcttgaaacatagggggccaaaactgctat 14815704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 426 - 519
Target Start/End: Complemental strand, 14984015 - 14983922
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    ||||||||| |||  ||||||||| || || | ||||||||||||||||||||||||||| || ||||||||||  |||||||||| |||||||    
T  14984015 aggcttaattgcacttttggccccgtatgttttaagaagttgcgattttggtcccctaactaattaaaatacaaaacagccccctatgtattgc 14983922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 23993894 - 23993967
Alignment:
Q  597 ggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||||||||||||||| ||||| ||||||||| |||| ||| | |||||||||| ||||||||||||||    
T  23993894 ggctggattgtattttattttgttagggggccaaaattgcaacttcttaatacttagggagccaaaactgctat 23993967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 431 - 532
Target Start/End: Original strand, 31226855 - 31226956
Alignment:
Q  431 taatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcag 530  Q
    ||||||||| |||||||||||||||||||  |||||| ||| |||| ||  |||||||||||||||||||| | ||||||||||| | ||| ||| ||||    
T  31226855 taatagcagttttggccccctaagtatcagaaagttgagatcttggccctgtaacaaaataaaatacaatcaaaccccctaagtactaccccttttgcag 31226954  T
Q  531 tt 532  Q
    ||    
T  31226955 tt 31226956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 518
Target Start/End: Original strand, 23993722 - 23993813
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||| |||   |||||||||||||  ||||||||||||||||| || |||||||||||||| ||||||||||  |||||||||    
T  23993722 aggcttaatagcagtttttatcccctaagtatcagaaagttgcgattttggtctcc-aacaaaataaaatataatccagccctataagtattg 23993813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 670
Target Start/End: Original strand, 35500264 - 35500399
Alignment:
Q  537 gcattgacttggtcaaaattggcctgggggg--caaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatc 634  Q
    |||||||||||||||||||| | ||| ||||  |||| | ||||||  | ||||||||||||||| |  |||||||||||||| ||||| ||||||||||    
T  35500264 gcattgacttggtcaaaattagtctgtgggggccaaaactgcaaaaggggcaatacttaaggggcggttttgtattttattttgttagggggccaaaatc 35500363  T
Q  635 gcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||| ||| ||| || |||||  |||||||| ||||    
T  35500364 gcaacttcttgaaacatagggccccaaaactactat 35500399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 422 - 492
Target Start/End: Original strand, 20650365 - 20650435
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataa 492  Q
    |||||||||| ||||||| ||| ||||||||||| ||||||||||| |||||||| ||||||| |||||||    
T  20650365 ttttaggcttcatagcagttttagccccctaagtttcaagaagttgagattttggccccctaagaaaataa 20650435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 540 - 670
Target Start/End: Complemental strand, 35500176 - 35500046
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaat 639  Q
    |||||||||||||||||||| |||||| ||||   ||||||| | ||||||||| ||||| |  |||||||||||||| ||||  || | ||||| |||     
T  35500176 ttgacttggtcaaaattggcttgggggtcaaaattgcaaaatggacaatacttagggggcggttttgtattttattttgttagtgggtcgaaatcacaac 35500077  T
Q  640 ttcctgatacttagggggccaaaactgctat 670  Q
    ||  ||| || ||||||||||||||||||||    
T  35500076 tttttgaaacatagggggccaaaactgctat 35500046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 11363876 - 11363973
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||| |||||||| |||  |||||||||||| || ||||||||||||||||||||  ||||||| || ||||||||||  |||| ||||| ||||||    
T  11363876 ttttttggcttaattgcatttttggccccctatgtttcaagaagttgcgattttggctccctaactaattaaaatacaaaacagctccctatgtattg 11363973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 426 - 499
Target Start/End: Complemental strand, 12802519 - 12802446
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||| |||||| ||||| || ||||||||||||||||||||||  ||||| ||||||| |||||    
T  12802519 aggcttaatagcagttttggctccctatgtttcaagaagttgcgattttggtcttctaactaaataaactacaa 12802446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 467 - 520
Target Start/End: Complemental strand, 13491829 - 13491776
Alignment:
Q  467 gcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  13491829 gcgattttggccccttaacaaaataaaatacaatccatccccctaagtattgcc 13491776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 670
Target Start/End: Complemental strand, 29370855 - 29370722
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    ||||||||||||||||||||| | |||||| |||| | ||||||  | || |||||||||||| |  |||||||||||||| | ||| |  |||||||||    
T  29370855 gcattgacttggtcaaaattgacttgggggccaaaactgcaaaaggggcagtacttaaggggcagttttgtattttattttgtcaggggatcaaaatcgc 29370756  T
Q  637 aatttcctgatacttagggggccaaaactgctat 670  Q
    || ||| | | || ||||||||||||||| ||||    
T  29370755 aacttcttaaaacatagggggccaaaacttctat 29370722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 588 - 670
Target Start/End: Complemental strand, 3403599 - 3403517
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| |||||  |||||||||||||||| |||||||| |||||| |||| |||||||||||| || |  ||||||||||||    
T  3403599 tacttagggggcatgattgtattttattttgttaggaggtcaaaattgcaaattcctgatactttggagatcaaaactgctat 3403517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 426 - 515
Target Start/End: Original strand, 3403510 - 3403599
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    |||||||||||||| ||||  | || |||||||| ||| |||| ||||||  | ||||||||||||||||||||||  ||||||||||||    
T  3403510 aggcttaatagcagttttgatctccaaagtatcaggaatttgcaattttgacctcctaacaaaataaaatacaatcatgccccctaagta 3403599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 585 - 670
Target Start/End: Original strand, 14816020 - 14816105
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||| ||||| |  ||||| |||||||  ||||| |||||||||||||| ||| ||| || ||||||||||||||||||||    
T  14816020 caatacttagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctat 14816105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 585 - 670
Target Start/End: Complemental strand, 23993813 - 23993729
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||  |||||||||| ||||||||||| || |||| |||||||||||| || ||||||||||||||   |||||||||||    
T  23993813 caatacttatagggctggattatattttattttgtt-ggagaccaaaatcgcaactttctgatacttaggggataaaaactgctat 23993729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 518
Target Start/End: Original strand, 28719331 - 28719408
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||| || | |||||||||||||||||| |||||||| || ||||||||||   ||||||||| ||||||    
T  28719331 tttggccccctatgttttaagaagttgcgattttggccccctaactaattaaaatacaaaatagccccctatgtattg 28719408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 35124591 - 35124679
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagt 514  Q
    ||||||||||||||| |||||||  | |||||||| ||||||| ||||| |  || |||||||||||||||||||| || ||||||||||    
T  35124591 taggcttaatagcagttttggccttcaaagtatca-gaagttgtgatttcgaacctctaacaaaataaaatacaattcatccccctaagt 35124679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 9781000 - 9780908
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||| ||||||||| || || | || |||||||||||||| ||| ||||| ||||||| |||||  | |||||||||||||||    
T  9781000 aggcttaattgcagttttggccccttatgttttaaaaagttgcgattttgatcctctaactaaataaactacaaaaccgccccctaagtattg 9780908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 21633386 - 21633290
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||| |||  |||||||||||| || | |||||||||| | ||||| |||||||| || ||||||||||  || ||||||| ||||||    
T  21633386 ttttaggcttaattgcacttttggccccctatgttttaagaagttgcaactttggacccctaactaattaaaatacaaaacaaccccctatgtattg 21633290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 35180564 - 35180508
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| ||||||||||| ||||||||||  |||||||||| ||||||    
T  35180564 aagttgcgattttggccccctaacaaattaaaatacaaaacagccccctatgtattg 35180508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 36286468 - 36286376
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||  ||||||||||||  | || | ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  36286468 aggcttaattgcacttttggccccctatctttccaaaagttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtattg 36286376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 37343687 - 37343743
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||||||| || ||||||||||  |||||||||| ||||||    
T  37343687 aagttgcgattttggtcccctaactaattaaaatacaaaacagccccctatgtattg 37343743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 426 - 485
Target Start/End: Original strand, 8030125 - 8030184
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    |||||||||||||| |||||||||||| || |  ||||||||| ||||||||||||||||    
T  8030125 aggcttaatagcagttttggccccctatgtttacagaagttgcaattttggtcccctaac 8030184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 422 - 489
Target Start/End: Complemental strand, 14489529 - 14489463
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||||||||||| ||| ||||||||| | ||| |||||||||||||||| ||||||| ||||    
T  14489529 ttttaggcttaatagcagttttcgccccctaactttcacgaagttgcgattttgg-cccctaagaaaa 14489463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 428 - 499
Target Start/End: Complemental strand, 17850547 - 17850476
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||| || |||||||||||| || | |||||||||||||||||| | |||||| ||||||| |||||    
T  17850547 gcttaatagtagttttggccccctatgttttaagaagttgcgattttggcctcctaactaaataaactacaa 17850476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 611 - 670
Target Start/End: Complemental strand, 20650435 - 20650376
Alignment:
Q  611 ttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||||||| |||||||||| ||| ||| ||| ||||||||||| |||||||||||    
T  20650435 ttattttcttagggggccaaaatctcaacttcttgaaacttagggggctaaaactgctat 20650376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 427 - 518
Target Start/End: Complemental strand, 32661748 - 32661657
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  ||||||||||||  | || | ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  32661748 ggcttaattgcacttttggccccctatctttccaaaagttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtattg 32661657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 429 - 508
Target Start/End: Complemental strand, 35125234 - 35125156
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccc 508  Q
    ||||||| ||| ||||||||| ||||||| | ||||| |||||||||  |||||||||||| |||||||||| |||||||    
T  35125234 cttaataacagttttggcccc-taagtattaggaagtagcgattttgaccccctaacaaaagaaaatacaattcagcccc 35125156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 422 - 497
Target Start/End: Complemental strand, 44078608 - 44078533
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatac 497  Q
    ||||||| ||||| |||  |||||||||||| || | ||||||||||||||||||| ||||||| || ||||||||    
T  44078608 ttttaggtttaattgcacttttggccccctatgttttaagaagttgcgattttggttccctaactaattaaaatac 44078533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 499
Target Start/End: Complemental strand, 52355 - 52281
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||| |||  |||||||||||| || | ||||| |||||||||||| |||||||| || ||||||||||    
T  52355 taggcttaattgcacttttggccccctatgttttaagaatttgcgattttggccccctaactaattaaaatacaa 52281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 427 - 489
Target Start/End: Complemental strand, 15023152 - 15023090
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    ||||||||||||| ||||||||||||| | ||||||||||| |||||||  ||||||| ||||    
T  15023152 ggcttaatagcagttttggccccctaactttcaagaagttgtgattttgaccccctaagaaaa 15023090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 499
Target Start/End: Complemental strand, 39672736 - 39672663
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||| |||| ||||||||| || || ||||||||||| |||||||||||| |||| ||||||| |||||    
T  39672736 taggcttaattgcagttttggcccc-tatgtttcaagaagttgtgattttggtcccataactaaataaactacaa 39672663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 23048284 - 23048381
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| ||| |||  ||||||||| ||  | | |||||||||||||||||| |||||||| || ||||||||||  ||||||| || ||||||    
T  23048284 tttttaggctaaattgcatttttggccccttatattttaagaagttgcgattttggccccctaactaattaaaatacaaaacagccccttatgtattg 23048381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 23049864 - 23049787
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| ||| || |||||||||||||||||||| || ||||| || ||||||||||  || ||||||| ||||||    
T  23049864 tttggccctctatgtttcaagaagttgcgattttggacctctaactaattaaaatacaaaacaaccccctatgtattg 23049787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 589 - 670
Target Start/End: Original strand, 37431765 - 37431845
Alignment:
Q  589 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||||| |  ||||| ||| ||||||||||||||||||||||||| ||| ||  | ||||||||| |||||||||||    
T  37431765 acttaaggggcggttttgtagttt-ttttcttaggaggccaaaatcgcaacttcgtggaagttagggggcgaaaactgctat 37431845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 427 - 475
Target Start/End: Original strand, 4856709 - 4856757
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttg 475  Q
    ||||||||||||| ||||||||| || || |||||||||||||||||||    
T  4856709 ggcttaatagcagttttggccccttatgtttcaagaagttgcgattttg 4856757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 12542435 - 12542379
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  12542435 aagttgcgattttggccccctaactaattaaaatacaaagcagccccctatgtattg 12542379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 16238147 - 16238203
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  16238147 aagttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtattg 16238203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 421 - 489
Target Start/End: Complemental strand, 34679410 - 34679342
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    ||||| ||||||||||||| ||| ||||||||| | ||| ||||||| |||||||| ||||||| ||||    
T  34679410 ttttttggcttaatagcagtttttgccccctaactttcacgaagttgtgattttggccccctaaaaaaa 34679342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 594 - 666
Target Start/End: Original strand, 35125155 - 35125226
Alignment:
Q  594 aggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 666  Q
    |||||||| |||||||||| |||| ||||| || ||||||||| | ||||| ||||||| |||||||||||||    
T  35125155 aggggctgaattgtattttcttttgttagggggtcaaaatcgctacttcctaatactta-ggggccaaaactg 35125226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 35173092 - 35173036
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||  ||||||||||| ||||||||||  |||||||||| ||||||    
T  35173092 aagttgcgattttgaccccctaacaaattaaaatacaaaacagccccctatgtattg 35173036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 11188341 - 11188396
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| |||||    
T  11188341 aagttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtatt 11188396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 521
Target Start/End: Original strand, 13491478 - 13491571
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||||||||| ||| ||||  ||| ||| | ||||||  ||||||| |||||||||||||||||||||||| || |||| |||||| |||||    
T  13491478 aggcttaatagcagttttagccct-taaatattacgaagttaagattttg-tcccctaacaaaataaaatacaatacatccccgtaagtactgccc 13491571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 670
Target Start/End: Original strand, 17850407 - 17850542
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggc-aaagcagcaaaatt-gccaatacttaaggggctggattgtattttattttcttaggaggccaaaatc 634  Q
    ||||||||||||||||||||| |||||||||| ||| | | ||||   | ||||||||  |||||    ||||| |||||||  ||||||||||||||||    
T  17850407 gcattgacttggtcaaaattgccctggggggccaaaactgtaaaaaaagtcaatactttgggggcaattttgtagtttatttagttaggaggccaaaatc 17850506  T
Q  635 gcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||| ||| | | || ||||||||||||||| ||||    
T  17850507 gcaacttcttaaaacatagggggccaaaactactat 17850542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 428 - 483
Target Start/End: Original strand, 20662516 - 20662571
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtccccta 483  Q
    ||||||||| || |||  |||||||||| | |||||||||||||||||||||||||    
T  20662516 gcttaatagtagttttaaccccctaagtttaaagaagttgcgattttggtccccta 20662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 494
Target Start/End: Original strand, 21631814 - 21631885
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaa 494  Q
    |||||| ||||| |||  |||||||||||| || ||| |||||||||||||||| |||||||| || |||||    
T  21631814 tttaggtttaattgcacttttggccccctatgtttcatgaagttgcgattttggccccctaactaattaaaa 21631885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 489
Target Start/End: Complemental strand, 36177405 - 36177343
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||| ||| ||| ||||| ||||| |||||||||||||||||||| ||||||| ||||    
T  36177405 aggcttaataacagttttagccccttaagtttcaagaagttgcgattttgg-cccctaagaaaa 36177343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 508
Target Start/End: Complemental strand, 43741785 - 43741734
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccc 508  Q
    ||||||||||||||||||| ||||||||| || ||||||||||  |||||||    
T  43741785 tcaagaagttgcgattttgatcccctaactaattaaaatacaaaacagcccc 43741734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 489
Target Start/End: Complemental strand, 44618052 - 44617989
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||||||| |||  ||| |||| | |||||||||||||||||||||||| ||| ||||    
T  44618052 aggcttaatagcagttttaaccctctaactttcaagaagttgcgattttggtcccttaagaaaa 44617989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 568
Target Start/End: Complemental strand, 8030237 - 8030203
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc 568  Q
    |||||||||||||||||||||||||||| ||||||    
T  8030237 tcagcattgacttggtcaaaattggcctagggggc 8030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 509
Target Start/End: Original strand, 10857339 - 10857421
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccc 509  Q
    |||||||| |||  ||||||||||||  | || | ||||||||||||||| |||||||| || ||||||||||  ||||||||    
T  10857339 ggcttaattgcacttttggccccctatctttccaaaagttgcgattttggccccctaactaattaaaatacaaaacagccccc 10857421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 518
Target Start/End: Complemental strand, 23280947 - 23280853
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| |||  |||| |||||||  | || | ||||||||||||||| |||||||| || ||||||||||  || ||||||| ||||||    
T  23280947 ttaggcttaattgcacttttgtccccctatctttctaaaagttgcgattttggccccctaactaattaaaatacaaaacacccccctatgtattg 23280853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 489
Target Start/End: Original strand, 36176981 - 36177043
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    ||||||||||||| ||| |||| |||||| ||| |||||||||||||| | ||||||| ||||    
T  36176981 ggcttaatagcagttttagccctctaagtttcacgaagttgcgattttagccccctaaaaaaa 36177043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 499
Target Start/End: Original strand, 43890114 - 43890172
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||| |||||| || | |||||||||||||||||||||| |||| || ||||||||||    
T  43890114 tttggtcccctatgtttgaagaagttgcgattttggtcccttaactaattaaaatacaa 43890172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 518
Target Start/End: Original strand, 16143697 - 16143757
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||| |||||||| || ||||||| ||  |||||||||| ||||||    
T  16143697 tcaagaagttgcgattttggccccctaactaattaaaata-aaaacagccccctatgtattg 16143757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 519
Target Start/End: Original strand, 19885893 - 19885950
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    ||||||||||||||| |||||||  || ||||||||||  |||||||||| |||||||    
T  19885893 aagttgcgattttggccccctaatcaattaaaatacaaaacagccccctatgtattgc 19885950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 518
Target Start/End: Original strand, 44077100 - 44077161
Alignment:
Q  457 tcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| |||||||| |||||||| || ||||||||||  ||||| |||| ||||||    
T  44077100 tcaagaagttgtgattttggacccctaactaattaaaatacaaaacagcctcctatgtattg 44077161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 4e-25; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 532
Target Start/End: Complemental strand, 45522511 - 45522400
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||||||||||| ||||| |||| ||||||| || | |||||||||||||||| | ||||||||||||||||||||||  | |||||||||||||||||    
T  45522511 tttttaggcttaaaagcagttttgaccccctatgttttaagaagttgcgattttagccccctaacaaaataaaatacaaaaccgccccctaagtattgcc 45522412  T
Q  521 catttcgcagtt 532  Q
    | ||| ||||||    
T  45522411 ccttttgcagtt 45522400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 427 - 532
Target Start/End: Complemental strand, 4695069 - 4694964
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccc-taacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    ||||||| ||||| |||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||| ||| |||||||||| |||||||||    
T  4695069 ggcttaaaagcagttttggccccctaagtatcaaaaagttgtgattttggcccccttaacaaaataaaatacaattcag-cccctaagtactgcccattt 4694971  T
Q  526 cgcagtt 532  Q
     ||||||    
T  4694970 tgcagtt 4694964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 426 - 520
Target Start/End: Complemental strand, 5899594 - 5899500
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||||||||| ||| |||||||  ||||||||||  ||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||    
T  5899594 aggcttaataacagttttggccatctaagtatcacaaagttgcaattttggtctcataacaaaataaaatacaattcagccccctaagtattgcc 5899500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 533 - 670
Target Start/End: Complemental strand, 34232900 - 34232764
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctgggggg-caaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaa 631  Q
    |||||||||||||||||||||||||| |||||||| |||| | ||||||  | || ||| || ||||||| ||||||||||||||| ||||| |||||||    
T  34232900 atcagcattgacttggtcaaaattggtctggggggccaaaactgcaaaagaggcagtacatagggggctgaattgtattttattttattagggggccaaa 34232801  T
Q  632 atcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    || ||||  |||| ||||||| |||||||||||||||||    
T  34232800 attgcaa-ctcctaatactta-ggggccaaaactgctat 34232764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 423 - 500
Target Start/End: Original strand, 9498905 - 9498982
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaat 500  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||    
T  9498905 tttaggcttaataacagttttggccccctaagtatcaggaagttgcgattttgaccccataacaaaataaaatacaat 9498982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 666
Target Start/End: Complemental strand, 29219219 - 29219086
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||||||||||||||||||||||| |||||||| ||| | ||||||  | |  |||||| |||| |||||||||||||||||| ||||| | | ||||    
T  29219219 tcagcattgacttggtcaaaattggcttggggggccaaaactgcaaaaggggccgtacttagggggttggattgtattttattttattaggggactaaaa 29219120  T
Q  633 tcgcaatttcctgatacttagggggccaaaactg 666  Q
    || ||| ||||| ||||||||||| |||||||||    
T  29219119 tcacaacttcctaatacttaggggaccaaaactg 29219086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 515
Target Start/End: Original strand, 5899211 - 5899298
Alignment:
Q  429 cttaatagcagatttggcccc-ctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||| ||| ||||||||| |||||||||| ||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||    
T  5899211 cttaataacagttttggcccccctaagtatcaggaagttgcgatttcggctccctaacaaaataaaatacaatccacccccctaagta 5899298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 666
Target Start/End: Original strand, 5899456 - 5899583
Alignment:
Q  538 cattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgca 637  Q
    ||||||||||||||||||||| ||||||  |||| | ||||||  | ||||||||| ||||||| ||||||||||||||| ||| ||| ||||||| |||    
T  5899456 cattgacttggtcaaaattggtctggggc-caaaactgcaaaagaggcaatacttagggggctgaattgtattttattttgttatgagaccaaaattgca 5899554  T
Q  638 atttcctgatacttagggggccaaaactg 666  Q
    | ||  ||||||||||  |||||||||||    
T  5899555 actttgtgatacttagatggccaaaactg 5899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 426 - 521
Target Start/End: Complemental strand, 8409879 - 8409785
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||||||||| |||| |||  || || | |||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||||||||    
T  8409879 aggcttaatagcagttttgaccca-tatgttttaagaagttgcgattttgggcccctaacaaaataaaatacaaaaccgccccctaagtattgccc 8409785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 441 - 532
Target Start/End: Original strand, 29219090 - 29219181
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||| ||||||||||| | ||||||| |||||| ||||||||| |||||||||||||||||| |||||||||||  |||| ||| ||||||    
T  29219090 tttggtcccctaagtattaggaagttgtgattttagtcccctaataaaataaaatacaatccaaccccctaagtacggccccttttgcagtt 29219181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 514
Target Start/End: Original strand, 2044672 - 2044761
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagt 514  Q
    ||||| |||||||||| ||||||||| ||||||||| ||| ||||||||| || ||| ||||||||||||||||||| || ||||||||||    
T  2044672 ttaggtttaatagcagttttggcccc-taagtatcatgaaattgcgatttcggccccataacaaaataaaatacaattcaaccccctaagt 2044761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 670
Target Start/End: Complemental strand, 18929445 - 18929308
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaa 631  Q
    ||||||||||||||||||||||||||| | || ||| ||| |  |||||  |  |||||||||||||||||||||||||||||||| |||||||| ||||    
T  18929445 atcagcattgacttggtcaaaattggcattggaggccaaaactacaaaaggga-aatacttaaggggctggattgtattttattttgttaggaggtcaaa 18929347  T
Q  632 atcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||| ||| ||  ||||| ||| | |||||| ||||||||    
T  18929346 atctcaactttttgataattaagaggccaatactgctat 18929308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 429 - 515
Target Start/End: Complemental strand, 29219435 - 29219349
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||||||  | || |||||||||||| | |||||||||||||| | ||||||||||||||| |||||||||||| |||||||||    
T  29219435 cttaatagcaattctgaccccctaagtattaggaagttgcgattttagccccctaacaaaataatatacaatccagctccctaagta 29219349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 533 - 666
Target Start/End: Complemental strand, 9499051 - 9498919
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    ||||||||| ||||||||||||||||| |||||  |||| | ||||||  |  | || ||| |||  || ||||||||||||||| ||| | || |||||    
T  9499051 atcagcattcacttggtcaaaattggcttggggt-caaaactgcaaaagggatagtatttaggggcatgaattgtattttattttgttatggggtcaaaa 9498953  T
Q  633 tcgcaatttcctgatacttagggggccaaaactg 666  Q
    |||||| |||||||||||||||||||||||||||    
T  9498952 tcgcaacttcctgatacttagggggccaaaactg 9498919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 663
Target Start/End: Original strand, 45163632 - 45163761
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||| |||||||||||||||||| | |||||| |||| | ||||||  | ||||||||| ||||| |  ||||| |||||||  ||||| |||||||||    
T  45163632 tcagctttgacttggtcaaaattgacatgggggccaaaactgcaaaaaagtcaatacttagggggcggttttgtagtttatttagttagggggccaaaat 45163731  T
Q  634 cgcaatttcctgatacttagggggccaaaa 663  Q
    ||||| ||| ||| || |||||||||||||    
T  45163732 cgcaacttcttgaaacatagggggccaaaa 45163761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 45163760 - 45163683
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||| || |||||||||||||||||||| |||||||| ||||||| |||||  | |||||||||||||||    
T  45163760 tttggccccctatgtttcaagaagttgcgattttggccccctaactaaataaactacaaaaccgccccctaagtattg 45163683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 668
Target Start/End: Original strand, 4694930 - 4695061
Alignment:
Q  538 cattgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttctta-ggaggccaaaatcg 635  Q
    ||||||||||||||||||||  || | |||| ||| | ||||||| | || |||||| ||||||| ||||||||||||||| ||| || ||||||||||     
T  4694930 cattgacttggtcaaaattgatctagagggccaaaactgcaaaatgggcagtactta-ggggctgaattgtattttattttgttaagggggccaaaatca 4695028  T
Q  636 caatttcctgatacttagggggccaaaactgct 668  Q
    ||| ||  |||||||||||||||||||||||||    
T  4695029 caactttttgatacttagggggccaaaactgct 4695061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 670
Target Start/End: Original strand, 9499130 - 9499265
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||||||||||||||||||||||||||   || |||| | ||||||    || ||||||  |||||||||||||||||||||  |||  ||  ||||||    
T  9499130 tcagcattgacttggtcaaaattggcctacaggtcaaaactgcaaaaggtgcagtacttagagggctggattgtattttatttctttat-agatcaaaat 9499228  T
Q  634 cgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| ||| | |||||||||||||||||||||||||    
T  9499229 cgcaacttcgtaatacttagggggccaaaactgctat 9499265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 517
Target Start/End: Original strand, 18929300 - 18929392
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    |||| ||||||||||  |||||| | ||| |||||| |||||| |||||||  | ||||||||||||||||||||||||||||| ||||||||    
T  18929300 taggtttaatagcagtattggcctcttaattatcaaaaagttgagattttgacctcctaacaaaataaaatacaatccagccccttaagtatt 18929392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 35795646 - 35795554
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||| |||||||||||| || ||||||||||| |||||||| |||||||| ||||||| |||||  | || ||||||||||||    
T  35795646 aggcttaattgcagttttggccccctatgtttcaagaagttgtgattttggccccctaactaaataaactacaaaaccgcaccctaagtattg 35795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 588 - 666
Target Start/End: Complemental strand, 5899298 - 5899219
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttag-ggggccaaaactg 666  Q
    |||||| |||| |||||||||||||||||| |||||  ||| ||||||||| |||||||||||||| |||||||||||||    
T  5899298 tacttaggggggtggattgtattttattttgttagggagccgaaatcgcaacttcctgatacttaggggggccaaaactg 5899219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 521
Target Start/End: Complemental strand, 9234795 - 9234700
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    ||||||||||| || ||||  ||| ||| ||||| |||||||||||||||| || |||||||| |||||||||||  |||| ||||||||||||||    
T  9234795 aggcttaatagtagttttgatcccttaaatatcaggaagttgcgattttggccctctaacaaattaaaatacaatttagcctcctaagtattgccc 9234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 532
Target Start/End: Complemental strand, 9499269 - 9499167
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgc 528  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||| | |  |||  ||||||||||||||||||||| ||||||| ||| | ||| ||    
T  9499269 cttaatagcagttttggccccctaagtattacgaagttgcgattttgat-ctataaagaaataaaatacaatccagccctctaagtactgcaccttttgc 9499171  T
Q  529 agtt 532  Q
    ||||    
T  9499170 agtt 9499167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 518
Target Start/End: Original strand, 17512093 - 17512188
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||| |||| |||| ||||||||||||  | |||||||||||||||||||| |||||||| ||||||| |||||    |||||||||||||||    
T  17512093 tttaggcataattgcagttttggccccctatatttcaagaagttgcgattttggccccctaactaaataaactacaaaaacgccccctaagtattg 17512188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 45308454 - 45308545
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  |||||||||||| || |||||||||||||||||||  |||||||| || ||||||||||  |||||||||| ||||||    
T  45308454 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttgaacccctaactaattaaaatacaaaacagccccctatgtattg 45308545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 29919069 - 29919146
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||| ||||||||||| |||| |||||||||||||| ||  |||||||||||| |||||||||||||||| |||||    
T  29919069 tttttagacttaatagcagttttgaccccctaagtatcacgatcttgcgattttgg-cccctaacaaaataaattacaa 29919146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 589 - 670
Target Start/End: Complemental strand, 2044761 - 2044681
Alignment:
Q  589 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| |||| || ||||||||||||||| ||| | |||| ||||||||||||| ||||||||| |||||||||||||||||    
T  2044761 acttagggggttgaattgtattttattttgttatggggccgaaatcgcaatttcatgatactta-ggggccaaaactgctat 2044681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 518
Target Start/End: Original strand, 23936293 - 23936370
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||| || |||||||||||||||||||| |||||||| || ||||||||||  || ||||||| ||||||    
T  23936293 tttggccccctatgtttcaagaagttgcgattttggccccctaactaattaaaatacaaaacaaccccctatgtattg 23936370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 532
Target Start/End: Complemental strand, 29196680 - 29196571
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    |||||| |||||| ||| ||||||||||||  | | |||||||||||||| |||||| |||||||||||||||||||    | ||||||||||||| ||     
T  29196680 tttaggtttaataacagttttggccccctatattttaagaagttgcgattatggtcctctaacaaaataaaatacaaagttgacccctaagtattgtccc 29196581  T
Q  523 tttcgcagtt 532  Q
    ||| ||||||    
T  29196580 ttttgcagtt 29196571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 430 - 532
Target Start/End: Original strand, 29340771 - 29340877
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccc----taagtattgcccattt 525  Q
    |||||||||| |||||||||||| || | || || |||||||||||| ||| ||||||||||||||||||  | ||||||    ||||||||||||||||    
T  29340771 ttaatagcagttttggccccctatgtttaaataatttgcgattttggccccttaacaaaataaaatacaaaaccgccccctaattaagtattgcccattt 29340870  T
Q  526 cgcagtt 532  Q
     ||||||    
T  29340871 tgcagtt 29340877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 426 - 518
Target Start/End: Original strand, 23475623 - 23475715
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||| |||||||||||| || ||||||||||| |||||||  ||| |||| ||||||| |||||  | |||||||||||||||    
T  23475623 aggcttaattgcagttttggccccctatgtttcaagaagttgtgattttgaccccttaactaaataaactacaaaaccgccccctaagtattg 23475715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 485
Target Start/End: Original strand, 755902 - 755961
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    |||||||||||||| |||||||| ||| || |||||||||||||||||||| ||||||||    
T  755902 aggcttaatagcagttttggccctctatgtttcaagaagttgcgattttggccccctaac 755961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 520
Target Start/End: Original strand, 34232752 - 34232849
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    ||||| || |||||||||| ||||||||| ||||||| | || ||||| ||||||| ||||||| ||||||||||||||| |||||||||| ||| ||||    
T  34232752 ttttttggtttaatagcagttttggcccc-taagtattagga-gttgcaattttggccccctaataaaataaaatacaattcagccccctatgtactgcc 34232849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 537 - 668
Target Start/End: Original strand, 45522367 - 45522497
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    ||||||||||||| |||||||| ||||||  |||| | ||||||  | ||||||||| ||||| |  |||||||||||||| ||||| ||| ||||||||    
T  45522367 gcattgacttggttaaaattggtctggggc-caaaactgcaaaaggggcaatacttagggggcggttttgtattttattttgttagggggctaaaatcgc 45522465  T
Q  637 aatttcctgatacttagggggccaaaactgct 668  Q
    || ||| | | || ||||||| ||||||||||    
T  45522466 aacttcttaaaacatagggggtcaaaactgct 45522497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 480
Target Start/End: Complemental strand, 11289361 - 11289307
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtccc 480  Q
    |||||||||||||| |||||||||||| || |||||||||||||||| |||||||    
T  11289361 aggcttaatagcagctttggccccctatgtttcaagaagttgcgattctggtccc 11289307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 588 - 670
Target Start/End: Original strand, 29219349 - 29219431
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| || |||||||||||| ||||||| ||||| ||| |||||||||| ||||| |||||||||||| || || ||||||    
T  29219349 tacttagggagctggattgtatattattttgttagggggctaaaatcgcaacttcctaatacttagggggtcagaattgctat 29219431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 518
Target Start/End: Original strand, 12278849 - 12278926
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||| || | ||||||||||||||||||  ||||||| || ||||||||||  |||||||||| ||||||    
T  12278849 tttggccccctatgttttaagaagttgcgattttggatccctaactaattaaaatacaaaacagccccctatgtattg 12278926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 424 - 521
Target Start/End: Complemental strand, 41602928 - 41602831
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||||||||||||| ||| ||||||||||| |||| ||||||||||||| | | ||||| |||| ||| |||||  | ||||| ||||| ||||||    
T  41602928 ttaggcttaatagcagttttagccccctaagtttcaaaaagttgcgattttagcctcctaagaaaaaaaactacaaaaccgccccttaagttttgccc 41602831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 589 - 670
Target Start/End: Original strand, 41602838 - 41602919
Alignment:
Q  589 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||||| |  ||||| ||| |||||||||||||| |||||||||| ||  ||| ||||||||||| |||||||||||    
T  41602838 acttaaggggcggttttgtagttttttttcttaggaggctaaaatcgcaactttttgaaacttagggggctaaaactgctat 41602919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 485
Target Start/End: Original strand, 2802642 - 2802706
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    |||||||| |||||||||| |||| ||||||| |||| |||||||||||||||||| ||| ||||    
T  2802642 tttttaggtttaatagcagttttgaccccctatgtattaagaagttgcgattttggacccataac 2802706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 520
Target Start/End: Original strand, 16907240 - 16907332
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcc 520  Q
    |||||||||||| ||||  || ||||| |||| ||  |||||||||||| | |||||||||||||| |||||  |||||| ||||||||||||    
T  16907240 gcttaatagcagttttgatcctctaagcatcacgatcttgcgattttggccgcctaacaaaataaattacaactcagccctctaagtattgcc 16907332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 667
Target Start/End: Complemental strand, 17512234 - 17512106
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggc-aaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 638  Q
    |||||||||||||||||| | |||||||| ||| | ||||||  | ||||||||| |||||    ||||| |||||||  ||||| ||||||||||||||    
T  17512234 ttgacttggtcaaaattgacatggggggccaaaactgcaaaaaagtcaatacttagggggcgtttttgtagtttatttagttagggggccaaaatcgcaa 17512135  T
Q  639 tttcctgatacttagggggccaaaactgc 667  Q
     ||| ||| |  |||||||||||||||||    
T  17512134 cttcttgaaatatagggggccaaaactgc 17512106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 416 - 475
Target Start/End: Original strand, 26889282 - 26889341
Alignment:
Q  416 ataactttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttg 475  Q
    |||| ||||||||||||||||||| |||||||||||| || || ||||||||| ||||||    
T  26889282 ataattttttaggcttaatagcagttttggccccctatgtttccagaagttgcaattttg 26889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 499
Target Start/End: Complemental strand, 1003864 - 1003787
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||||| ||| |||| ||||||| || |||||||||||| |||||||  ||||||| ||||||| |||||    
T  1003864 tttttaggcttaataacagttttg-ccccctatgtttcaagaagttgcaattttggctccctaactaaataaactacaa 1003787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 426 - 532
Target Start/End: Original strand, 14170421 - 14170527
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    ||||||||| |||| |||| ||||||| || | |||||||||||||||||| |||||||  ||||||| |||||  | |||  |||||||||| |  |||    
T  14170421 aggcttaattgcagttttgaccccctatgttttaagaagttgcgattttggccccctaattaaataaactacaaaaccgcctgctaagtattgacttttt 14170520  T
Q  526 cgcagtt 532  Q
    |||||||    
T  14170521 cgcagtt 14170527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 29919146 - 29919081
Alignment:
Q  604 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||| |||||||| ||||| ||||||||||||||  || |||||||||||||| ||||||||||||    
T  29919146 ttgtaatttattttgttagg-ggccaaaatcgcaagatcgtgatacttagggggtcaaaactgctat 29919081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 667
Target Start/End: Original strand, 35795506 - 35795636
Alignment:
Q  537 gcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 636  Q
    |||||||||| |||||||||||  |||||| |||| | | ||||  | ||||||||| || || |  ||||| |||||||  ||||| |||||||||| |    
T  35795506 gcattgactttgtcaaaattggtatgggggccaaaactgtaaaaaagtcaatacttagggtgcggttttgtagtttatttagttagggggccaaaatcac 35795605  T
Q  637 aatttcctgatacttagggggccaaaactgc 667  Q
    || ||| ||| || |||||||||||||||||    
T  35795606 aacttcttgaaacatagggggccaaaactgc 35795636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 478 - 532
Target Start/End: Original strand, 45522188 - 45522242
Alignment:
Q  478 cccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    ||||||||||||||||||||||  | |||||||||||||||||| ||| ||||||    
T  45522188 cccctaacaaaataaaatacaaaaccgccccctaagtattgccccttttgcagtt 45522242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 499
Target Start/End: Complemental strand, 5645808 - 5645767
Alignment:
Q  458 caagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  5645808 caagaagttgtgattttggccccctaacaaaataaaatacaa 5645767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 5916956 - 5916879
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| ||| || | |||||||||||||||| | |||||||| || ||||||||||  |||||||||| ||||||    
T  5916956 tttggccctctatgttttaagaagttgcgatttttgccccctaactaattaaaatacaaaacagccccctatgtattg 5916879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 476
Target Start/End: Original strand, 18092907 - 18092960
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttgg 476  Q
    ||||| ||||||||||| ||| |||||||||||  |||||||||||||||||||    
T  18092907 tttagacttaatagcagttttagccccctaagttacaagaagttgcgattttgg 18092960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 45309641 - 45309544
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||| ||||||||| |||  |||||||| |||  | |||||||||||| ||||||| || ||||| || ||||||||||  |||||||||| ||||||    
T  45309641 ttttaaggcttaattgcacttttggccctctatatttcaagaagttgcaattttggccctctaactaattaaaatacaaaacagccccctatgtattg 45309544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 756173 - 756113
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||||||| |||||| ||||| || | |||||||||||||||||| || |||||    
T  756173 taggcttaatagcagttttggctccctatgttttaagaagttgcgattttggccctctaac 756113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 4461676 - 4461732
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 485  Q
    ||||||||||| ||||||||| || || |||| || |||||||||||||||||||||    
T  4461676 cttaatagcagttttggccccttatgtttcaaaaatttgcgattttggtcccctaac 4461732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 7658870 - 7658814
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  7658870 aagttgcgattttggccccctaactaattaaaatacaaatcagccccctatgtattg 7658814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 16982624 - 16982712
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaag 513  Q
    ||||||| ||||||| |||  |||||||| | ||| |||||||| ||||||||||||||| |||| ||| |||||  | ||||||||||    
T  16982624 taggcttgatagcagttttcaccccctaactttcacgaagttgcaattttggtcccctaagaaaaaaaactacaaaaccgccccctaag 16982712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 614 - 670
Target Start/End: Complemental strand, 18092973 - 18092917
Alignment:
Q  614 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||| |||||||||||||||| ||| ||  ||||||||||| |||||||||||    
T  18092973 ttttcttacgaggccaaaatcgcaacttcttgtaacttagggggctaaaactgctat 18092917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 20853372 - 20853440
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    ||||||||||||||||||| ||| ||||||||| | ||  |||||||||||||||  ||||||| ||||    
T  20853372 tttttaggcttaatagcagttttagccccctaactttcttgaagttgcgattttgaccccctaaaaaaa 20853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 614 - 670
Target Start/End: Original strand, 27545607 - 27545663
Alignment:
Q  614 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||| |||||||||||||| ||| ||||| ||||||||| ||||| |||||    
T  27545607 ttttcttagggggccaaaatcgcaacttcgtgatagttagggggcaaaaaccgctat 27545663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 429 - 517
Target Start/End: Original strand, 35795219 - 35795307
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    |||||| |||| |||||||||||| || |||| ||||||| ||||||  |||||| | ||||||| |||||  | ||||||||||||||    
T  35795219 cttaattgcagttttggccccctatgtttcaaaaagttgcaattttgaccccctagctaaataaactacaaaaccgccccctaagtatt 35795307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 44807353 - 44807297
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  44807353 aagttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtattg 44807297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 517
Target Start/End: Complemental strand, 2045012 - 2044947
Alignment:
Q  450 ctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    |||||||| |||| ||||||||||||  ||| |||||||||||||||||||| || ||||||||||||    
T  2045012 ctaagtat-aagaggttgcgattttgaccccttaacaaaataaaatacaatctag-cccctaagtatt 2044947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 7477372 - 7477427
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtatt 517  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||| || |||||    
T  7477372 aagttgcgattttggtcccctaactaattaaaatacaaaacagccccttatgtatt 7477427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 670
Target Start/End: Complemental strand, 16907340 - 16907245
Alignment:
Q  575 gcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| || |||||||||  ||||||  ||||| |||||||| ||||| ||||||||||||||  || |||| ||||| ||  ||||||||||||    
T  16907340 gcaaaagtggcaatacttagagggctgagttgtaatttattttgttaggcggccaaaatcgcaagatcgtgatgcttagaggatcaaaactgctat 16907245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 489
Target Start/End: Original strand, 17070906 - 17070969
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||||||| ||| ||||| ||| | ||| |||||||||||||||| ||||||| ||||    
T  17070906 aggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaa 17070969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 489
Target Start/End: Complemental strand, 17577366 - 17577303
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||||||||| ||| ||||| ||| | ||| |||||||||||||||| ||||||| ||||    
T  17577366 aggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaa 17577303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 667
Target Start/End: Original strand, 18896616 - 18896671
Alignment:
Q  612 tattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgc 667  Q
    |||||||||||  ||||||||||||||  |  ||||||||||||||||||||||||    
T  18896616 tattttcttagtgggccaaaatcgcaagattgtgatacttagggggccaaaactgc 18896671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 27545666 - 27545607
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    |||||||| | ||| ||||||||| ||||| |||||||||||||||| ||||||| ||||    
T  27545666 ttaatagcggtttttgccccctaactatcacgaagttgcgattttggccccctaagaaaa 27545607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 518
Target Start/End: Original strand, 41368387 - 41368442
Alignment:
Q  463 agttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  41368387 agttgcgattttggccccctaactaattaaaatacaaaacagccccctatgtattg 41368442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 568
Target Start/End: Complemental strand, 4461817 - 4461783
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggc 568  Q
    |||||||||||||||||||||||||||| ||||||    
T  4461817 tcagcattgacttggtcaaaattggcctagggggc 4461783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 525
Target Start/End: Complemental strand, 10427491 - 10427395
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaa-gaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    ||||||||| || ||||||||||||||||||||  ||  ||| ||||||| ||||||||||||||||| ||||| |||| | ||||||| || ||||||    
T  10427491 gcttaatagtagttttggccccctaagtatcaataaaaatgcaattttgg-cccctaacaaaataaaa-acaattcagctctctaagtactgtccattt 10427395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 18650945 - 18651014
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccccta 511  Q
    |||||||||||| || |||||||||||||||||||| ||| |||  || ||||||||||  ||||||||||    
T  18650945 tttggccccctatgtttcaagaagttgcgattttgg-cccttaattaattaaaatacaaaacagcccccta 18651014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 29340840 - 29340774
Alignment:
Q  604 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||||||||||| ||| | |||||||||||||| ||  | | || ||||||||||||||||||||    
T  29340840 ttgtattttattttgttaaggggccaaaatcgcaaattatttaaacatagggggccaaaactgctat 29340774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 422 - 475
Target Start/End: Original strand, 6041084 - 6041137
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttg 475  Q
    |||| ||||||||| ||| |||||||||||| || |||||||||| ||||||||    
T  6041084 tttttggcttaataacagttttggccccctatgtttcaagaagttacgattttg 6041137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 422 - 475
Target Start/End: Original strand, 6044716 - 6044769
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttg 475  Q
    |||| ||||||||| ||| |||||||||||| || |||||||||| ||||||||    
T  6044716 tttttggcttaataacagttttggccccctatgtttcaagaagttacgattttg 6044769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 499
Target Start/End: Original strand, 8409486 - 8409558
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||| |||||||||||| ||   |||||  | ||||||| | ||||||||||||||||||||||    
T  8409486 aggcttaatagcagttttggccccctatgttctaagaatatacgatttt-gacccctaacaaaataaaatacaa 8409558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 670
Target Start/End: Original strand, 9234703 - 9234788
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||| | ||||  ||||||||||| ||| ||||  |||||||||||||| ||||||||| ||| |||  ||||||| ||||    
T  9234703 caatacttaggaggctaaattgtattttaatttgttagagggccaaaatcgcaacttcctgatatttaagggatcaaaactactat 9234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 18621715 - 18621812
Alignment:
Q  421 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||| |||  ||||| ||||||  | || | |||||||||||||||  ||||||| || ||||||||||  || ||||||| ||||||    
T  18621715 tttttaggcttaattgcacttttggtcccctatctttctaaaagttgcgattttggctccctaactaattaaaatacaaaacaaccccctatgtattg 18621812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 31947852 - 31947945
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||| |||  ||||||||||||  | |  | ||||||||||||||| |||||||| || ||||||||||  ||||| |||| ||||||    
T  31947852 taggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggccccctaactaattaaaatacaaaacagcctcctatgtattg 31947945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 519
Target Start/End: Original strand, 41487199 - 41487292
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||||||||||| ||| |||||| || | ||| |||||||||||||||  ||||||| |||  ||| |||||  | ||||||||||| ||||    
T  41487199 aggcttaatagcagttttcgcccccgaattttcacgaagttgcgattttgaccccctaagaaacaaaactacaaaaccgccccctaagttttgc 41487292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 423 - 525
Target Start/End: Complemental strand, 128233 - 128131
Alignment:
Q  423 tttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccca 522  Q
    |||||| |||||||||| |||||||| ||||||||||  ||||||| ||||||| ||| || ||||||||||||||||||||||||||||||| | ||||    
T  128233 tttagggttaatagcagttttggccctctaagtatcagaaagttgcaattttgggcccttaccaaaataaaatacaatccagccccctaagtactaccca 128134  T
Q  523 ttt 525  Q
    |||    
T  128133 ttt 128131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 588 - 670
Target Start/End: Original strand, 128141 - 128223
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    |||||| |||||||||||||||||||||||  || | | ||||||| |||| || ||||||||||| ||||||||||||||||    
T  128141 tacttagggggctggattgtattttattttggtaagggcccaaaattgcaactttctgatacttagagggccaaaactgctat 128223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 51; Significance: 9e-20; HSPs: 4)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 427 - 525
Target Start/End: Complemental strand, 9950 - 9853
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccattt 525  Q
    ||||||||||||| |||| |||||| | ||| | |||||||||||||||  ||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  9950 ggcttaatagcagttttgacccccttaatattaggaagttgcgattttga-cccctaataaaataaaatacaatctagccctctaagtattgcccattt 9853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 540 - 670
Target Start/End: Original strand, 9815 - 9944
Alignment:
Q  540 ttgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaat 639  Q
    ||||||||||||||||| ||||  | | ||||   ||||||| | |||||||||  ||||| |||||||||||||||| ||||| || |||||||||||     
T  9815 ttgacttggtcaaaattcgcctatgagccaaaagtgcaaaatgggcaatacttagagggctagattgtattttattttattagg-ggtcaaaatcgcaac 9913  T
Q  640 ttcctgatacttagggggccaaaactgctat 670  Q
    ||||| ||| | |||||| ||||||||||||    
T  9914 ttcctaatattaagggggtcaaaactgctat 9944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 430 - 521
Target Start/End: Original strand, 9548 - 9639
Alignment:
Q  430 ttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgccc 521  Q
    |||||| ||||||| |||||  ||||||  ||||||||||||||||| || | || ||||||||||||||| ||||||| ||||||| ||||    
T  9548 ttaataacagatttagcccctaaagtatttagaagttgcgattttggcccacaaataaaataaaatacaattcagccccttaagtatcgccc 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 638
Target Start/End: Complemental strand, 9634 - 9583
Alignment:
Q  587 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 638  Q
    ||||||||||||||| ||||||||||||||| || |  ||||||||||||||    
T  9634 atacttaaggggctgaattgtattttattttatttgtgggccaaaatcgcaa 9583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 50; Significance: 3e-19; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 670
Target Start/End: Original strand, 162215 - 162351
Alignment:
Q  533 atcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaa 632  Q
    |||||||||||||| |||||||||| ||| ||   |||| | ||||||  | |||||||||| |||||| ||||||||||||||| ||||| ||||||||    
T  162215 atcagcattgacttagtcaaaattgacctaggac-caaaactgcaaaagagacaatacttaaagggctgtattgtattttattttgttagggggccaaaa 162313  T
Q  633 tcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    || ||  ||||  ||||||| |||||||||||||||||    
T  162314 tcacatcttcccaatacttaaggggccaaaactgctat 162351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 429 - 518
Target Start/End: Complemental strand, 162355 - 162266
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| ||||||||| |||||||   |||| || |||||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  162355 cttaatagcagttttggccccttaagtattgggaagatgtgattttggccccctaacaaaataaaatacaatacagccctttaagtattg 162266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 447 - 518
Target Start/End: Complemental strand, 161803 - 161732
Alignment:
Q  447 cccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||  ||| || |||||||| || |||||||||||||||||||||||| ||  |||||||||    
T  161803 cccctaagtatcagtaagatgagattttggccctctaacaaaataaaatacaatccagtcctttaagtattg 161732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 585 - 656
Target Start/End: Original strand, 161732 - 161803
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggg 656  Q
    |||||||||| || ||||||||||||||||||| ||||  |||||||||| ||  || ||||||||||||||    
T  161732 caatacttaaaggactggattgtattttattttgttagagggccaaaatctcatcttactgatacttagggg 161803  T

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Target: scaffold0025 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 532
Target Start/End: Complemental strand, 151676 - 151574
Alignment:
Q  429 cttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgc 528  Q
    |||||| |||| |||| || ||||||||||| ||| ||| |||||| | |||||||||| |||||||||||| |||||||||||||| ||||| ||| ||    
T  151676 cttaattgcagttttgtcctcctaagtatcaggaa-ttgtgattttagccccctaacaatataaaatacaattcagccccctaagtactgccccttttgc 151578  T
Q  529 agtt 532  Q
    ||||    
T  151577 agtt 151574  T

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Target: scaffold0025; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 667
Target Start/End: Original strand, 151537 - 151669
Alignment:
Q  534 tcagcattgacttggtcaaaattggcctggggggcaaagcagcaaaattgccaatacttaaggggctggattgtattttattttcttaggaggccaaaat 633  Q
    ||||||||||| |||||||||||| || | ||  |||| | ||||||  | || |||||| ||||||| |||||||||||| || ||||| ||| |||||    
T  151537 tcagcattgacctggtcaaaattgtcccgtggaccaaaactgcaaaaggggcagtacttagggggctgaattgtattttatattgttagggggctaaaat 151636  T
Q  634 cgcaatttcctgatacttagggggccaaaactgc 667  Q
    | ||| ||||||||||||||| || |||||||||    
T  151637 cacaa-ttcctgatacttaggaggacaaaactgc 151669  T

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Target: scaffold1088 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 2149 - 2096
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagta 515  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  2149 aagttgcgattttggccccctaacaaaataaaatacaattcagccccttaagta 2096  T

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Target: scaffold1088; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 588 - 638
Target Start/End: Original strand, 2096 - 2146
Alignment:
Q  588 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 638  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  2096 tacttaaggggctgaattgtattttattttgttagggggccaaaatcgcaa 2146  T

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Target: scaffold1088; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 489
Target Start/End: Original strand, 2012 - 2081
Alignment:
Q  420 ctttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaa 489  Q
    ||||| ||| |||||||||| |||| |||||||| |||||||||||||| ||||| | || |||||||||    
T  2012 cttttaaggtttaatagcagttttgaccccctaactatcaagaagttgcaattttagccctctaacaaaa 2081  T

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Target: scaffold0725 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 422 - 480
Target Start/End: Complemental strand, 6750 - 6692
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtccc 480  Q
    |||||||||||||||||| ||| ||||||||||| |||| ||||||||||||| |||||    
T  6750 ttttaggcttaatagcagttttagccccctaagtttcaacaagttgcgattttagtccc 6692  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 426 - 518
Target Start/End: Original strand, 22788 - 22881
Alignment:
Q  426 aggcttaatagcagatttgg-ccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||  ||||| ||||||| || || ||||||||||||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  22788 aggcttaattgcacttttggtccccctatgtttctagaagttgcgattttggacccctaactaattaaaatacaaaacagccccctatgtattg 22881  T

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Target: scaffold0468 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 10346 - 10442
Alignment:
Q  422 ttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||| ||||||||||||| ||||||| |||| || | ||||| |||| ||||||| |||||||| ||||||| |||||  | ||||| |||||||||    
T  10346 tttttggcttaatagcagttttggcctcctatgttttaagaaattgcaattttggccccctaactaaataaactacaaaaccgccccttaagtattg 10442  T

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Target: scaffold0468; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 670
Target Start/End: Complemental strand, 10442 - 10357
Alignment:
Q  585 caatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 670  Q
    ||||||||||||||| |  ||||| |||||||  ||||| ||||||||| |||||||| | | || |||| |||||||||||||||    
T  10442 caatacttaaggggcggttttgtagtttatttagttagggggccaaaattgcaatttcttaaaacataggaggccaaaactgctat 10357  T

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Target: scaffold0047 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 63342 - 63286
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||||||||||||||||||| || ||||||||||  |||||||||| ||||||    
T  63342 aagttgcgattttggtcccctaactaattaaaatacaaaacagccccctatgtattg 63286  T

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Target: scaffold0047; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 499
Target Start/End: Original strand, 63070 - 63107
Alignment:
Q  462 aagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    |||||||||||||||||||||||| || ||||||||||    
T  63070 aagttgcgattttggtcccctaactaattaaaatacaa 63107  T

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Target: scaffold0854 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 428 - 518
Target Start/End: Original strand, 1844 - 1934
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||| |||  ||||||| |||| || ||||||||||| ||||||||  ||||||| || ||||||||||  |||||||||| ||||||    
T  1844 gcttaattgcatttttggcctcctatgtttcaagaagttgagattttggatccctaactaattaaaatacaaaacagccccctatgtattg 1934  T

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Target: scaffold0854; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 428 - 518
Target Start/End: Complemental strand, 3440 - 3350
Alignment:
Q  428 gcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||| |||  ||||||| |||| || | |||||||||||||||||| |||||||| || ||||||||||  || ||||||| ||||||    
T  3440 gcttaattgcacttttggcctcctatgttttaagaagttgcgattttggccccctaactaattaaaatacaaaacaaccccctatgtattg 3350  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 518
Target Start/End: Original strand, 199663 - 199759
Alignment:
Q  424 ttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggt--cccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||||| |||  |||||||||||| || |||||||||| |||||||  |  |||||||| || ||||||||||  |||||||||| ||||||    
T  199663 ttaggcttaattgcacttttggccccctatgtttcaagaagttacgattttttttacccctaactaattaaaatacaaaacagccccctatgtattg 199759  T

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Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 201313 - 201216
Alignment:
Q  421 tttttaggcttaatagcagatttggcccccta-agtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||| |||||| |||  |||||||||||| | ||| |||||||||||||||| | |||||||| || ||||||||||  ||||| |||| ||||||    
T  201313 tttttagacttaattgcacttttggccccctatattat-aagaagttgcgattttagccccctaactaattaaaatacaaaacagcctcctatgtattg 201216  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 122644 - 122552
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    ||||||||| |||  ||||||||||||  | || | ||||||||||||||| | |||||| || ||||||||||  |||||||||| ||||||    
T  122644 aggcttaattgcacttttggccccctatctttccaaaagttgcgattttggcctcctaactaattaaaatacaaaacagccccctatgtattg 122552  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 31979 - 32070
Alignment:
Q  427 ggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattg 518  Q
    |||||||| |||  ||||||||||||  | || | ||||||| ||||||| |||||||| || ||||||||||  |||||||||| ||||||    
T  31979 ggcttaattgcacttttggccccctatctttccaaaagttgcaattttggccccctaactaattaaaatacaaaacagccccctatgtattg 32070  T

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Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 32309 - 32239
Alignment:
Q  441 tttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagcccccta 511  Q
    ||||||||||||  | || | ||||||||||||||| |||||||| || ||||||||||  ||||||||||    
T  32309 tttggccccctatctttccaaaagttgcgattttggccccctaactaattaaaatacaaaacagcccccta 32239  T

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Target: scaffold1458 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 499
Target Start/End: Original strand, 1469 - 1543
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||||| ||| ||||||||| | |||  |||||| |||||||| ||||||| |||| ||| |||||    
T  1469 taggcttaatagcagttttagccccctaactttcacaaagttgagattttggccccctaagaaaaaaaactacaa 1543  T

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Target: scaffold0515 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 499
Target Start/End: Original strand, 3637 - 3711
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||||| ||| ||||||||| | ||   ||||||||||||||| ||||||| |||| ||| |||||    
T  3637 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaa 3711  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 499
Target Start/End: Original strand, 3637 - 3711
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||||| ||| ||||||||| | ||   ||||||||||||||| ||||||| |||| ||| |||||    
T  3637 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaa 3711  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 499
Target Start/End: Complemental strand, 405509 - 405436
Alignment:
Q  425 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 499  Q
    ||||||||||||||| |||  | ||| |||| |||||||||||||||||||  ||||||| |||| |||||||||    
T  405509 taggcttaatagcagttttaactccc-aagtttcaagaagttgcgattttgaccccctaagaaaaaaaaatacaa 405436  T

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Target: scaffold0400 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 532
Target Start/End: Original strand, 8581 - 8642
Alignment:
Q  471 ttttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    |||||| ||||||||||||||||||||||| |||| || |||||| | ||| ||| ||||||    
T  8581 ttttggccccctaacaaaataaaatacaattcagctccataagtactcccccttttgcagtt 8642  T

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Target: scaffold0365 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 532
Target Start/End: Original strand, 9224 - 9285
Alignment:
Q  471 ttttggtcccctaacaaaataaaatacaatccagccccctaagtattgcccatttcgcagtt 532  Q
    |||||| ||||||||||||||||||||||| |||| || |||||| | ||| ||| ||||||    
T  9224 ttttggccccctaacaaaataaaatacaattcagctccataagtactcccccttttgcagtt 9285  T

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Target: scaffold0062 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 519
Target Start/End: Original strand, 46075 - 46168
Alignment:
Q  426 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaatccagccccctaagtattgc 519  Q
    |||||| ||||||| ||| ||||||||| | ||| ||||||||||||||   ||||||| |||| ||| |||||  | ||||||||||| ||||    
T  46075 aggctttatagcagttttcgccccctaactttcacgaagttgcgattttaaccccctaagaaaagaaactacaaaaccgccccctaagttttgc 46168  T

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Target: scaffold0062; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 673
Target Start/End: Complemental strand, 46148 - 46079
Alignment:
Q  604 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctataaa 673  Q
    ||||| ||| |||||||||| ||  |||||||||| ||| ||| | ||||||||| ||||||||||||||    
T  46148 ttgtagtttcttttcttagggggttaaaatcgcaacttcgtgaaagttagggggcgaaaactgctataaa 46079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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