View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1213_low_24 (Length: 481)

Name: NF1213_low_24
Description: NF1213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1213_low_24
NF1213_low_24
[»] chr3 (7 HSPs)
chr3 (182-434)||(1727370-1727622)
chr3 (182-326)||(15669196-15669337)
chr3 (267-312)||(13147007-13147052)
chr3 (267-309)||(15841106-15841148)
chr3 (267-312)||(1061431-1061476)
chr3 (267-312)||(12240464-12240509)
chr3 (267-312)||(18004834-18004879)
[»] chr7 (5 HSPs)
chr7 (22-80)||(20549087-20549145)
chr7 (206-322)||(24832055-24832171)
chr7 (434-465)||(13877045-13877076)
chr7 (358-416)||(27289231-27289289)
chr7 (267-312)||(13177379-13177424)
[»] chr2 (1 HSPs)
chr2 (267-312)||(24804576-24804621)
[»] chr1 (3 HSPs)
chr1 (337-434)||(27518805-27518902)
chr1 (267-312)||(19162628-19162673)
chr1 (267-312)||(22652536-22652581)
[»] scaffold0382 (2 HSPs)
scaffold0382 (267-312)||(4230-4275)
scaffold0382 (267-312)||(12613-12658)
[»] scaffold0211 (1 HSPs)
scaffold0211 (267-312)||(2629-2674)
[»] chr8 (3 HSPs)
chr8 (259-312)||(23802576-23802629)
chr8 (267-312)||(3840826-3840871)
chr8 (267-312)||(23790529-23790574)
[»] chr6 (4 HSPs)
chr6 (267-312)||(17611499-17611544)
chr6 (357-406)||(12349486-12349535)
chr6 (267-312)||(17780873-17780918)
chr6 (267-312)||(22383858-22383903)
[»] chr4 (2 HSPs)
chr4 (434-470)||(15867203-15867239)
chr4 (357-404)||(39042706-39042753)
[»] scaffold0010 (1 HSPs)
scaffold0010 (267-312)||(112857-112902)
[»] chr5 (3 HSPs)
chr5 (267-312)||(13531066-13531111)
chr5 (267-312)||(23485971-23486016)
chr5 (267-312)||(25182199-25182244)
[»] scaffold0892 (1 HSPs)
scaffold0892 (267-311)||(1346-1390)
[»] scaffold0016 (1 HSPs)
scaffold0016 (264-312)||(197574-197622)
[»] scaffold0012 (1 HSPs)
scaffold0012 (264-312)||(135591-135639)


Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 182 - 434
Target Start/End: Original strand, 1727370 - 1727622
Alignment:
Q  182 ctaaaacctttaaaccaaaagtcttgaatgattctaagccgcatatcttgaagcctaaggttctgaagaaggaaaagtccttcataactaaccccaaaga 281  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  1727370 ctaaaacctttaaaccaaaagtcttgaatgattctaagccacatatcttgaagcctaaagttctgaagaaggaaaagtccttcagagctaaccccaaaga 1727469  T
Q  282 acccatgaatatatgtgtacctaagtctgaaattttctatgctacagaaacactttatgggagaaccaacgcttcagtcatggtacttgaacagtggtta 381  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  1727470 acccatgaaaatatgtgtacctaagtctgaaattttatatgctacagaaacactttatgggagaaccaacgcttcagtcatggtacctggacagtggtta 1727569  T
Q  382 ctcatgacacatgacaagagaaaagcatattttccaaacattaacactgaaag 434  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1727570 ctcatgacacatgacaagagaaaagcacattttccaaacattaacactgaaag 1727622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 326
Target Start/End: Original strand, 15669196 - 15669337
Alignment:
Q  182 ctaaaacctttaaaccaaaagtcttgaatgattctaagccgcatatcttgaagcctaaggttctgaagaaggaaaagtccttcataactaaccccaaaga 281  Q
    ||||||| ||||||||||||||||| ||||||||||| ||  ||| ||||||||||||||||||   ||||||||| | ||| | ||| ||| ||||||     
T  15669196 ctaaaacttttaaaccaaaagtcttcaatgattctaatccatatagcttgaagcctaaggttct---gaaggaaaaatactttagaacaaacaccaaagg 15669292  T
Q  282 acccatgaatatatgtgtacctaagtctgaaattttctatgctac 326  Q
    ||||||||| ||||| |||| ||||||| ||||||||||||||||    
T  15669293 acccatgaaaatatgggtacataagtctaaaattttctatgctac 15669337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 13147052 - 13147007
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||    
T  13147052 aactaaccccaaaggacccatgaagatatgggtacctaagtctgaa 13147007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 15841148 - 15841106
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtct 309  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||    
T  15841148 aactaaccccaaaggacccatgaagatatgggtacctaagtct 15841106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 1061476 - 1061431
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  1061476 aactaacccaaaaggacccatgaagatatgggtacctaagtctgaa 1061431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 12240464 - 12240509
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    ||||||||| |||||||||||||| ||||| |||||||| ||||||    
T  12240464 aactaacccaaaagaacccatgaagatatgggtacctaaatctgaa 12240509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 18004879 - 18004834
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||| ||||||    
T  18004879 aactaaccccaaaggacccatgaagatatgggtacctaaatctgaa 18004834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 20549087 - 20549145
Alignment:
Q  22 tatagactatagcacaatgtagaagctatgtaaaataatttactaactttctgttcaga 80  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20549087 tatagactatagcacaatttagaagctatgtaaaataatttactaactttctgttcaga 20549145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 24832171 - 24832055
Alignment:
Q  206 tgaatgattctaagccgcatatcttgaagcctaaggttctgaagaaggaaaagtccttcataactaaccccaaagaacccatgaatatatgtgtacctaa 305  Q
    |||||||||  ||||  |||| |||||||||||| | | |||| |||||||| ||||| | |||||||||||||| ||||||||| ||||| ||||| |     
T  24832171 tgaatgattaaaagcatcatagcttgaagcctaaaggtatgaaaaaggaaaattcctttagaactaaccccaaagtacccatgaaaatatgggtacccac 24832072  T
Q  306 gtctgaaattttctatg 322  Q
    |||||||||||||||||    
T  24832071 gtctgaaattttctatg 24832055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 465
Target Start/End: Complemental strand, 13877076 - 13877045
Alignment:
Q  434 ggcaagattattggtacatgaactattggtaa 465  Q
    ||||||||||||||||||||||||||||||||    
T  13877076 ggcaagattattggtacatgaactattggtaa 13877045  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 27289231 - 27289289
Alignment:
Q  358 gtcatggtacttgaacagtggttactcatgacacatgacaagagaaaagcatattttcc 416  Q
    ||||||||||||| ||||||||| ||| || ||||||||| ||||||||| ||| ||||    
T  27289231 gtcatggtacttggacagtggttgctcgtgtcacatgacaggagaaaagcctatgttcc 27289289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 13177379 - 13177424
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  13177379 aactaaccctaaaggacccatgaagatatgggtacctaagtctgaa 13177424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 24804576 - 24804621
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  24804576 aactaaccccaaagaacccatgaagatatgggtacctaagtctgaa 24804621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 27518805 - 27518902
Alignment:
Q  337 tatgggagaaccaacgcttcagtcatggtacttgaacagtggttactcatgacacatgacaagagaaaagcatattttccaaacattaacactgaaag 434  Q
    |||||||||| ||| | | |||||||||||| |||||||| ||| |||  || ||||||||| |||||||||||| ||||||||  ||||| ||||||    
T  27518805 tatgggagaatcaaagttccagtcatggtacctgaacagtagttgctcccgatacatgacaatagaaaagcatatgttccaaaccctaacattgaaag 27518902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 19162628 - 19162673
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||    
T  19162628 aactaaccccaaaggacccatgaagatatgggtacctaagtctgaa 19162673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 22652581 - 22652536
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||    
T  22652581 aactaaccccaaaggacccatgaagatatgggtacctaagtctgaa 22652536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 4230 - 4275
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||    
T  4230 aactaaccccaaaggacccatgaagatatgggtacctaagtctgaa 4275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 12613 - 12658
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||    
T  12613 aactaaccccaaaggacccatgaagatatgggtacctaagtctgaa 12658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 2629 - 2674
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||    
T  2629 aactaaccccaaaggacccatgaagatatgggtacctaagtctgaa 2674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 23802629 - 23802576
Alignment:
Q  259 tccttcataactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||| |||||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  23802629 tcctccataactaacccaaaaggacccatgaagatatgggtacctaagtctgaa 23802576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 3840871 - 3840826
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  3840871 aactaacccaaaaggacccatgaagatatgggtacctaagtctgaa 3840826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 23790574 - 23790529
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  23790574 aactaacccaaaaggacccatgaagatatgggtacctaagtctgaa 23790529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 17611499 - 17611544
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||    
T  17611499 aactaaccccaaaggacccatgaagatatgggtacctaagtctgaa 17611544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 12349535 - 12349486
Alignment:
Q  357 agtcatggtacttgaacagtggttactcatgacacatgacaagagaaaag 406  Q
    ||||||||||| || ||||||||| |||| ||||||||||| ||||||||    
T  12349535 agtcatggtacctgtacagtggttgctcacgacacatgacaggagaaaag 12349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 17780918 - 17780873
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  17780918 aactaacccaaaaggacccatgaagatatgggtacctaagtctgaa 17780873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 22383903 - 22383858
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||| ||||| ||||||||| ||||| |||||||||||||||    
T  22383903 aactaacctcaaaggacccatgaaaatatgggtacctaagtctgaa 22383858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 470
Target Start/End: Original strand, 15867203 - 15867239
Alignment:
Q  434 ggcaagattattggtacatgaactattggtaattcat 470  Q
    |||||||||||||||||||||||||||||||| ||||    
T  15867203 ggcaagattattggtacatgaactattggtaactcat 15867239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 404
Target Start/End: Complemental strand, 39042753 - 39042706
Alignment:
Q  357 agtcatggtacttgaacagtggttactcatgacacatgacaagagaaa 404  Q
    ||||||||||| || ||||||||| |||| ||||||||||||||||||    
T  39042753 agtcatggtacctggacagtggttgctcacgacacatgacaagagaaa 39042706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 112902 - 112857
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  112902 aactaacccaaaagtacccatgaagatatgggtacctaagtctgaa 112857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 13531111 - 13531066
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  13531111 aactaacccaaaaggacccatgaagatatgggtacctaagtctgaa 13531066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 23486016 - 23485971
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| || |||||| ||||| |||||||||||||||    
T  23486016 aactaaccccaaaggacacatgaagatatgggtacctaagtctgaa 23485971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 25182199 - 25182244
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||||| ||||||||| ||||| |||||||||| ||||    
T  25182199 aactaaccccaaaggacccatgaagatatgcgtacctaagtttgaa 25182244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 1346 - 1390
Alignment:
Q  267 aactaaccccaaagaacccatgaatatatgtgtacctaagtctga 311  Q
    ||||||||| |||| ||||||||| ||||| ||||||||||||||    
T  1346 aactaacccaaaaggacccatgaagatatgggtacctaagtctga 1390  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 197622 - 197574
Alignment:
Q  264 cataactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||| |||| ||||||||| ||||| |||||||| ||||||    
T  197622 cataactaacccaaaaggacccatgaagatatgggtacctaaatctgaa 197574  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 135639 - 135591
Alignment:
Q  264 cataactaaccccaaagaacccatgaatatatgtgtacctaagtctgaa 312  Q
    |||||||||||| |||| ||||||||| ||||| |||||||| ||||||    
T  135639 cataactaaccctaaaggacccatgaagatatgggtacctaaatctgaa 135591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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