View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1213_low_60 (Length: 326)

Name: NF1213_low_60
Description: NF1213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1213_low_60
NF1213_low_60
[»] scaffold0188 (2 HSPs)
scaffold0188 (27-326)||(17586-17884)
scaffold0188 (27-218)||(23786-23977)
[»] chr8 (47 HSPs)
chr8 (27-275)||(1261639-1261886)
chr8 (27-275)||(26288055-26288292)
chr8 (27-275)||(26301312-26301549)
chr8 (27-275)||(26313306-26313543)
chr8 (27-326)||(33037441-33037738)
chr8 (27-275)||(18852849-18853098)
chr8 (27-275)||(36979543-36979792)
chr8 (27-275)||(18870243-18870492)
chr8 (27-275)||(4759756-4760006)
chr8 (27-275)||(30655812-30656060)
chr8 (27-256)||(10688841-10689073)
chr8 (27-153)||(31071035-31071161)
chr8 (39-256)||(6311476-6311693)
chr8 (56-192)||(7412532-7412666)
chr8 (30-192)||(4456195-4456354)
chr8 (93-275)||(7289651-7289831)
chr8 (41-189)||(19175528-19175674)
chr8 (67-192)||(4696379-4696502)
chr8 (67-192)||(5702251-5702374)
chr8 (67-192)||(23799347-23799470)
chr8 (67-194)||(19752163-19752288)
chr8 (67-197)||(26402991-26403123)
chr8 (67-192)||(3051323-3051447)
chr8 (68-192)||(28307766-28307889)
chr8 (67-194)||(9054188-9054314)
chr8 (221-326)||(15290298-15290401)
chr8 (221-326)||(15470667-15470770)
chr8 (67-156)||(6127426-6127515)
chr8 (76-192)||(5990333-5990446)
chr8 (93-155)||(25327996-25328058)
chr8 (93-155)||(25328122-25328184)
chr8 (196-275)||(25689764-25689841)
chr8 (67-157)||(7492979-7493067)
chr8 (216-275)||(31043131-31043190)
chr8 (284-326)||(1261569-1261611)
chr8 (93-196)||(9765617-9765720)
chr8 (259-326)||(42575689-42575754)
chr8 (287-326)||(4759688-4759727)
chr8 (94-137)||(39784685-39784728)
chr8 (221-276)||(42575631-42575686)
chr8 (204-275)||(2627543-2627612)
chr8 (286-326)||(30656088-30656128)
chr8 (93-192)||(4731532-4731629)
chr8 (74-196)||(13204558-13204670)
chr8 (116-192)||(41266841-41266918)
chr8 (93-192)||(43036297-43036394)
chr8 (286-326)||(36979820-36979860)
[»] chr5 (65 HSPs)
chr5 (27-326)||(35387827-35388144)
chr5 (27-275)||(38219563-38219805)
chr5 (31-275)||(24136017-24136261)
chr5 (27-275)||(31180379-31180626)
chr5 (30-275)||(15464700-15464934)
chr5 (30-275)||(36932046-36932279)
chr5 (40-192)||(9353103-9353253)
chr5 (29-192)||(14520396-14520556)
chr5 (67-194)||(28832460-28832585)
chr5 (56-189)||(11916746-11916877)
chr5 (62-194)||(31300364-31300494)
chr5 (67-194)||(24553296-24553421)
chr5 (67-192)||(11181603-11181726)
chr5 (67-192)||(17003730-17003853)
chr5 (27-183)||(30631572-30631730)
chr5 (67-194)||(42127139-42127264)
chr5 (93-209)||(1456952-1457067)
chr5 (67-196)||(10281955-10282085)
chr5 (68-189)||(12083951-12084071)
chr5 (93-198)||(27445150-27445254)
chr5 (93-198)||(27449994-27450098)
chr5 (93-198)||(43592459-43592563)
chr5 (93-198)||(43598904-43599008)
chr5 (93-198)||(43604396-43604500)
chr5 (93-198)||(43609888-43609992)
chr5 (67-178)||(7160689-7160798)
chr5 (67-172)||(19588948-19589051)
chr5 (222-326)||(29720121-29720225)
chr5 (216-326)||(16407796-16407906)
chr5 (93-183)||(15044865-15044956)
chr5 (216-326)||(16409232-16409342)
chr5 (67-197)||(3880503-3880634)
chr5 (281-326)||(24136284-24136329)
chr5 (204-275)||(9789515-9789584)
chr5 (204-275)||(18441939-18442008)
chr5 (75-174)||(33030728-33030824)
chr5 (260-326)||(29751526-29751590)
chr5 (216-273)||(26170584-26170641)
chr5 (259-326)||(16544148-16544213)
chr5 (259-326)||(16546370-16546435)
chr5 (259-326)||(25077860-25077925)
chr5 (259-326)||(25135829-25135894)
chr5 (204-275)||(29722332-29722401)
chr5 (259-326)||(40379832-40379897)
chr5 (259-326)||(40382043-40382108)
chr5 (216-275)||(26177691-26177750)
chr5 (67-102)||(42127269-42127304)
chr5 (221-275)||(16544217-16544271)
chr5 (221-275)||(16546439-16546493)
chr5 (221-275)||(25077929-25077983)
chr5 (221-275)||(25135898-25135952)
chr5 (221-275)||(40379901-40379955)
chr5 (221-275)||(40382112-40382166)
chr5 (224-275)||(43599043-43599095)
chr5 (224-275)||(43604535-43604587)
chr5 (224-275)||(43610027-43610079)
chr5 (94-137)||(28807436-28807479)
chr5 (221-275)||(10593066-10593120)
chr5 (93-192)||(13488077-13488174)
chr5 (223-275)||(27445291-27445344)
chr5 (223-275)||(27450134-27450187)
chr5 (204-275)||(29751451-29751521)
chr5 (223-275)||(43592597-43592650)
chr5 (262-326)||(26170512-26170576)
chr5 (262-326)||(26177621-26177685)
[»] chr1 (47 HSPs)
chr1 (27-275)||(24202455-24202701)
chr1 (27-326)||(19361067-19361364)
chr1 (27-275)||(19365993-19366240)
chr1 (27-274)||(19358530-19358775)
chr1 (27-275)||(24787047-24787295)
chr1 (30-192)||(13604393-13604552)
chr1 (67-194)||(47098594-47098719)
chr1 (41-189)||(3281884-3282030)
chr1 (41-189)||(21536344-21536490)
chr1 (40-192)||(37069943-37070093)
chr1 (67-194)||(47102608-47102733)
chr1 (67-190)||(29652016-29652137)
chr1 (58-194)||(32889632-32889766)
chr1 (41-192)||(26644669-26644818)
chr1 (67-192)||(13598603-13598726)
chr1 (71-194)||(27104171-27104291)
chr1 (67-194)||(9476465-9476590)
chr1 (27-115)||(19379916-19380004)
chr1 (67-196)||(40816580-40816710)
chr1 (72-196)||(47703699-47703824)
chr1 (216-326)||(51765145-51765255)
chr1 (67-191)||(19073131-19073256)
chr1 (67-191)||(19121021-19121146)
chr1 (67-190)||(22819634-22819756)
chr1 (93-183)||(41398415-41398506)
chr1 (93-152)||(41390760-41390819)
chr1 (68-192)||(9022677-9022799)
chr1 (67-135)||(16124342-16124408)
chr1 (261-326)||(40282114-40282179)
chr1 (286-326)||(20622626-20622666)
chr1 (259-326)||(44203372-44203437)
chr1 (283-326)||(24202385-24202428)
chr1 (221-275)||(9987010-9987064)
chr1 (221-275)||(21053765-21053819)
chr1 (221-275)||(40282184-40282238)
chr1 (221-275)||(44203441-44203495)
chr1 (261-326)||(9986940-9987005)
chr1 (261-326)||(21053695-21053760)
chr1 (286-326)||(24786979-24787019)
chr1 (286-326)||(24793801-24793841)
chr1 (94-137)||(1054874-1054917)
chr1 (114-196)||(17345327-17345410)
chr1 (94-137)||(25439758-25439801)
chr1 (94-137)||(25444951-25444994)
chr1 (94-137)||(39445679-39445722)
chr1 (94-137)||(44023736-44023779)
chr1 (93-172)||(197105-197181)
[»] chr7 (58 HSPs)
chr7 (27-326)||(21639973-21640269)
chr7 (27-275)||(21646171-21646418)
chr7 (27-275)||(18413804-18414050)
chr7 (27-275)||(1533126-1533374)
chr7 (27-275)||(18408928-18409174)
chr7 (27-326)||(20357182-20357478)
chr7 (27-275)||(2058132-2058383)
chr7 (56-192)||(2479528-2479662)
chr7 (67-198)||(46516070-46516199)
chr7 (27-189)||(21989072-21989231)
chr7 (67-192)||(20284292-20284415)
chr7 (67-192)||(23402784-23402907)
chr7 (30-192)||(47263833-47263992)
chr7 (67-194)||(2647466-2647591)
chr7 (67-189)||(4796443-4796562)
chr7 (71-192)||(44847896-44848015)
chr7 (67-194)||(2580593-2580717)
chr7 (67-194)||(9189775-9189901)
chr7 (67-194)||(9184943-9185068)
chr7 (67-192)||(3047457-3047581)
chr7 (95-210)||(4873310-4873424)
chr7 (67-192)||(33332221-33332344)
chr7 (67-196)||(5817036-5817164)
chr7 (93-198)||(12397091-12397195)
chr7 (67-199)||(29160008-29160141)
chr7 (93-192)||(31109389-31109489)
chr7 (221-326)||(32060631-32060734)
chr7 (93-198)||(24024128-24024232)
chr7 (95-155)||(12406513-12406573)
chr7 (93-192)||(49091918-49092015)
chr7 (27-114)||(21983450-21983536)
chr7 (221-326)||(43504461-43504566)
chr7 (118-192)||(79640-79714)
chr7 (268-326)||(21646430-21646488)
chr7 (216-326)||(48408553-48408663)
chr7 (41-127)||(35960993-35961078)
chr7 (221-275)||(1562310-1562364)
chr7 (67-127)||(49091866-49091924)
chr7 (67-110)||(56152-56195)
chr7 (216-275)||(39731177-39731236)
chr7 (67-147)||(9235398-9235476)
chr7 (196-275)||(24789649-24789727)
chr7 (206-275)||(25767253-25767321)
chr7 (261-326)||(39731088-39731153)
chr7 (286-326)||(2058411-2058451)
chr7 (259-326)||(6592702-6592767)
chr7 (259-326)||(6594918-6594983)
chr7 (259-326)||(18389125-18389190)
chr7 (259-326)||(18392561-18392626)
chr7 (286-326)||(24789581-24789621)
chr7 (221-275)||(6592644-6592698)
chr7 (221-275)||(6594860-6594914)
chr7 (221-275)||(18389067-18389121)
chr7 (221-275)||(18392503-18392557)
chr7 (284-325)||(1533059-1533100)
chr7 (259-326)||(1562368-1562433)
chr7 (152-189)||(21983541-21983578)
chr7 (93-172)||(38671419-38671495)
[»] chr3 (88 HSPs)
chr3 (27-275)||(1306113-1306360)
chr3 (27-326)||(2671219-2671517)
chr3 (27-275)||(8477530-8477780)
chr3 (27-275)||(9090983-9091232)
chr3 (27-275)||(40372478-40372727)
chr3 (27-275)||(8738745-8738994)
chr3 (27-275)||(32143486-32143722)
chr3 (27-275)||(28503542-28503795)
chr3 (27-274)||(26928287-26928522)
chr3 (27-256)||(7167410-7167641)
chr3 (27-275)||(28501375-28501628)
chr3 (27-192)||(27986216-27986379)
chr3 (30-192)||(33386435-33386595)
chr3 (27-275)||(27453123-27453357)
chr3 (30-192)||(27974712-27974871)
chr3 (56-192)||(21711414-21711548)
chr3 (41-188)||(16264526-16264671)
chr3 (67-192)||(40592542-40592665)
chr3 (56-192)||(8370249-8370383)
chr3 (56-188)||(36029285-36029415)
chr3 (41-192)||(39032315-39032463)
chr3 (67-192)||(1736064-1736187)
chr3 (56-194)||(6794473-6794609)
chr3 (67-192)||(47923664-47923787)
chr3 (72-194)||(26299196-26299316)
chr3 (67-192)||(24694926-24695049)
chr3 (56-189)||(35925670-35925803)
chr3 (60-192)||(37725871-37726001)
chr3 (67-194)||(3323449-3323574)
chr3 (67-194)||(3328115-3328240)
chr3 (67-190)||(48438419-48438539)
chr3 (67-199)||(3715752-3715885)
chr3 (67-194)||(1417249-1417374)
chr3 (67-194)||(8126833-8126958)
chr3 (67-194)||(37466498-37466623)
chr3 (67-189)||(25929159-25929278)
chr3 (81-195)||(4386733-4386846)
chr3 (67-196)||(25795983-25796113)
chr3 (83-192)||(27026925-27027032)
chr3 (83-192)||(27038270-27038377)
chr3 (93-198)||(22172996-22173100)
chr3 (67-191)||(47649773-47649898)
chr3 (96-192)||(23410529-23410624)
chr3 (83-188)||(40844874-40844977)
chr3 (221-326)||(10208933-10209036)
chr3 (93-192)||(23392106-23392204)
chr3 (67-196)||(21353765-21353898)
chr3 (67-114)||(18552721-18552768)
chr3 (67-192)||(30709557-30709672)
chr3 (259-326)||(10058182-10058247)
chr3 (259-326)||(10060404-10060469)
chr3 (259-326)||(10062626-10062691)
chr3 (259-326)||(10064848-10064913)
chr3 (95-275)||(23198136-23198305)
chr3 (221-275)||(7782454-7782508)
chr3 (259-326)||(4598887-4598952)
chr3 (259-326)||(4601108-4601173)
chr3 (286-326)||(8477808-8477848)
chr3 (259-326)||(10055960-10056025)
chr3 (259-326)||(10067070-10067135)
chr3 (259-326)||(10211133-10211198)
chr3 (259-326)||(25637167-25637232)
chr3 (287-326)||(8738677-8738716)
chr3 (287-326)||(9090915-9090954)
chr3 (221-276)||(10056028-10056083)
chr3 (221-276)||(10058250-10058305)
chr3 (221-276)||(10060472-10060527)
chr3 (221-276)||(10062694-10062749)
chr3 (221-276)||(10064916-10064971)
chr3 (221-276)||(10067138-10067193)
chr3 (221-275)||(3617257-3617311)
chr3 (221-275)||(4598829-4598883)
chr3 (221-275)||(4601050-4601104)
chr3 (221-275)||(10211202-10211256)
chr3 (221-275)||(25637236-25637290)
chr3 (290-326)||(40372410-40372446)
chr3 (85-128)||(10274603-10274646)
chr3 (94-137)||(18656614-18656657)
chr3 (216-275)||(23200445-23200504)
chr3 (260-326)||(27352235-27352299)
chr3 (206-275)||(800910-800977)
chr3 (260-326)||(23198309-23198375)
chr3 (221-275)||(54634933-54634986)
chr3 (261-326)||(7782513-7782578)
chr3 (259-326)||(3617188-3617253)
chr3 (286-326)||(7167688-7167728)
chr3 (93-172)||(22835199-22835275)
chr3 (93-172)||(39153558-39153634)
[»] chr6 (52 HSPs)
chr6 (27-275)||(5674452-5674700)
chr6 (27-275)||(22709173-22709420)
chr6 (30-192)||(5757249-5757408)
chr6 (67-194)||(31936778-31936903)
chr6 (56-194)||(31979704-31979840)
chr6 (56-194)||(5572012-5572148)
chr6 (58-192)||(31086245-31086377)
chr6 (67-188)||(5017271-5017390)
chr6 (67-192)||(24435743-24435865)
chr6 (67-190)||(22963902-22964023)
chr6 (67-190)||(23824370-23824491)
chr6 (93-198)||(11857154-11857258)
chr6 (93-198)||(14737378-14737482)
chr6 (93-198)||(22010498-22010602)
chr6 (67-196)||(21801108-21801238)
chr6 (93-198)||(14742238-14742342)
chr6 (30-147)||(21356204-21356318)
chr6 (221-326)||(2171844-2171949)
chr6 (221-326)||(6097747-6097852)
chr6 (117-192)||(18234334-18234409)
chr6 (56-114)||(18233038-18233096)
chr6 (127-192)||(10076962-10077027)
chr6 (114-189)||(21272763-21272838)
chr6 (68-196)||(14521877-14522007)
chr6 (225-326)||(5266418-5266518)
chr6 (67-192)||(31076706-31076830)
chr6 (56-114)||(4630145-4630203)
chr6 (259-326)||(34166821-34166886)
chr6 (221-275)||(3073064-3073118)
chr6 (142-192)||(23896628-23896678)
chr6 (281-326)||(5674384-5674429)
chr6 (259-326)||(13151004-13151069)
chr6 (259-326)||(33342468-33342533)
chr6 (259-326)||(34164599-34164664)
chr6 (221-276)||(33342410-33342465)
chr6 (221-276)||(34164667-34164722)
chr6 (221-276)||(34166889-34166944)
chr6 (264-326)||(411841-411903)
chr6 (221-275)||(411911-411965)
chr6 (221-275)||(6027057-6027111)
chr6 (221-275)||(25421114-25421168)
chr6 (259-326)||(6026988-6027053)
chr6 (259-326)||(6136328-6136393)
chr6 (67-103)||(10077026-10077062)
chr6 (259-326)||(25420951-25421016)
chr6 (259-326)||(25421045-25421110)
chr6 (94-137)||(6438680-6438723)
chr6 (94-137)||(28155432-28155475)
chr6 (93-155)||(28184684-28184749)
chr6 (68-153)||(5385799-5385881)
chr6 (221-275)||(6136271-6136324)
chr6 (285-326)||(3073147-3073188)
[»] chr4 (55 HSPs)
chr4 (27-275)||(28468220-28468470)
chr4 (27-275)||(24742106-24742355)
chr4 (29-326)||(29760810-29761104)
chr4 (31-192)||(31985404-31985563)
chr4 (56-192)||(16623064-16623198)
chr4 (30-192)||(5396442-5396601)
chr4 (56-192)||(16628643-16628777)
chr4 (67-192)||(3777752-3777875)
chr4 (67-192)||(5268971-5269094)
chr4 (67-192)||(10047584-10047707)
chr4 (56-192)||(36315001-36315135)
chr4 (56-192)||(36329210-36329344)
chr4 (67-194)||(25861802-25861927)
chr4 (56-192)||(6743186-6743320)
chr4 (41-189)||(8689270-8689416)
chr4 (25-188)||(5143422-5143582)
chr4 (67-192)||(5112440-5112564)
chr4 (68-194)||(42599344-42599467)
chr4 (27-189)||(5147842-5148001)
chr4 (57-192)||(38152208-38152342)
chr4 (67-196)||(24334014-24334144)
chr4 (67-192)||(54867385-54867505)
chr4 (93-198)||(51520637-51520741)
chr4 (67-197)||(3793843-3793974)
chr4 (93-198)||(9224208-9224312)
chr4 (93-198)||(9228995-9229099)
chr4 (67-192)||(39774075-39774199)
chr4 (93-183)||(18712581-18712671)
chr4 (93-196)||(6542378-6542480)
chr4 (93-196)||(51336933-51337035)
chr4 (67-192)||(18377562-18377679)
chr4 (68-192)||(1983070-1983194)
chr4 (93-275)||(3814202-3814383)
chr4 (221-275)||(13992600-13992654)
chr4 (259-326)||(7122421-7122486)
chr4 (204-275)||(31495608-31495677)
chr4 (221-276)||(5135872-5135927)
chr4 (221-276)||(5138098-5138153)
chr4 (71-172)||(37782070-37782170)
chr4 (94-137)||(45347678-45347721)
chr4 (114-172)||(6677362-6677420)
chr4 (221-275)||(7122490-7122544)
chr4 (259-326)||(5135804-5135869)
chr4 (259-326)||(5138030-5138095)
chr4 (290-326)||(24742387-24742423)
chr4 (262-326)||(28468132-28468196)
chr4 (94-137)||(5732844-5732887)
chr4 (94-137)||(18855906-18855949)
chr4 (94-137)||(45357158-45357201)
chr4 (221-275)||(31985331-31985385)
chr4 (93-199)||(4587823-4587929)
chr4 (261-326)||(13992659-13992724)
chr4 (93-192)||(48142916-48143013)
chr4 (93-174)||(48893839-48893920)
chr4 (93-192)||(52082854-52082951)
[»] chr2 (51 HSPs)
chr2 (27-275)||(9296084-9296332)
chr2 (27-275)||(14291654-14291903)
chr2 (75-275)||(25409842-25410041)
chr2 (27-275)||(3491915-3492152)
chr2 (27-275)||(11098609-11098858)
chr2 (27-275)||(40738997-40739232)
chr2 (30-189)||(36757536-36757692)
chr2 (40-192)||(28258948-28259098)
chr2 (67-192)||(33528395-33528518)
chr2 (67-194)||(14698778-14698903)
chr2 (67-194)||(33118338-33118463)
chr2 (67-189)||(21630148-21630268)
chr2 (67-189)||(34389054-34389174)
chr2 (67-194)||(10445236-10445361)
chr2 (41-189)||(23078245-23078391)
chr2 (67-192)||(13569532-13569655)
chr2 (67-192)||(20522425-20522548)
chr2 (41-192)||(8389920-8390070)
chr2 (67-183)||(17865408-17865522)
chr2 (67-196)||(8040267-8040397)
chr2 (67-192)||(10707023-10707146)
chr2 (67-196)||(31056246-31056376)
chr2 (67-194)||(35397712-35397839)
chr2 (67-196)||(34682097-34682227)
chr2 (67-192)||(40015128-40015251)
chr2 (67-162)||(39483136-39483229)
chr2 (68-174)||(2837816-2837923)
chr2 (71-174)||(2869481-2869582)
chr2 (93-183)||(39811803-39811894)
chr2 (221-275)||(4484644-4484698)
chr2 (72-192)||(15903660-15903779)
chr2 (27-77)||(25398660-25398710)
chr2 (27-77)||(25403798-25403848)
chr2 (27-77)||(25407787-25407837)
chr2 (72-174)||(1344333-1344435)
chr2 (205-275)||(6266499-6266567)
chr2 (216-275)||(32289373-32289432)
chr2 (221-275)||(30833146-30833200)
chr2 (114-196)||(42269617-42269702)
chr2 (83-162)||(41586351-41586429)
chr2 (259-326)||(12647748-12647813)
chr2 (262-326)||(32289303-32289367)
chr2 (221-275)||(12647690-12647744)
chr2 (261-326)||(4484703-4484768)
chr2 (286-326)||(9296016-9296056)
chr2 (94-137)||(32246968-32247011)
chr2 (41-172)||(3278176-3278307)
chr2 (281-326)||(25410066-25410111)
chr2 (93-192)||(39284759-39284856)
chr2 (93-172)||(11151788-11151864)
chr2 (93-172)||(42362247-42362323)
[»] scaffold0140 (1 HSPs)
scaffold0140 (30-192)||(8188-8348)
[»] scaffold0087 (2 HSPs)
scaffold0087 (30-192)||(36603-36762)
scaffold0087 (30-192)||(43732-43891)
[»] scaffold0006 (3 HSPs)
scaffold0006 (30-192)||(133050-133209)
scaffold0006 (67-192)||(5888-6011)
scaffold0006 (67-192)||(2697-2819)
[»] scaffold0098 (1 HSPs)
scaffold0098 (40-192)||(45374-45525)
[»] scaffold0036 (1 HSPs)
scaffold0036 (56-189)||(85875-86006)
[»] scaffold0148 (1 HSPs)
scaffold0148 (67-196)||(10934-11064)
[»] scaffold0491 (3 HSPs)
scaffold0491 (216-326)||(9044-9154)
scaffold0491 (216-275)||(11470-11529)
scaffold0491 (261-326)||(11534-11599)
[»] scaffold0176 (1 HSPs)
scaffold0176 (79-192)||(17466-17577)
[»] scaffold0078 (1 HSPs)
scaffold0078 (68-192)||(23736-23859)
[»] scaffold0286 (1 HSPs)
scaffold0286 (221-326)||(22094-22199)
[»] scaffold0135 (1 HSPs)
scaffold0135 (93-198)||(34863-34967)
[»] scaffold0355 (2 HSPs)
scaffold0355 (93-183)||(3663-3754)
scaffold0355 (93-128)||(9514-9549)
[»] scaffold1519 (1 HSPs)
scaffold1519 (177-275)||(707-806)
[»] scaffold0137 (2 HSPs)
scaffold0137 (259-326)||(6014-6079)
scaffold0137 (221-275)||(6083-6137)
[»] scaffold0565 (2 HSPs)
scaffold0565 (221-275)||(2908-2962)
scaffold0565 (259-326)||(2966-3031)
[»] scaffold0674 (2 HSPs)
scaffold0674 (259-326)||(4091-4156)
scaffold0674 (221-275)||(4033-4087)
[»] scaffold0464 (1 HSPs)
scaffold0464 (94-137)||(542-585)
[»] scaffold0477 (1 HSPs)
scaffold0477 (125-190)||(5728-5794)


Alignment Details
Target: scaffold0188 (Bit Score: 236; Significance: 1e-130; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 27 - 326
Target Start/End: Complemental strand, 17884 - 17586
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17884 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 17785  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  17784 gagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttc-aaaatctgcac 17686  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||| |||||||||||||||| |||||| ||||||||||||||| |||| |||||| ||||||| ||| | |||||||||||||||||||||||||    
T  17685 aagaacacttaaatactagccttccactgataaaatcgtgtcacgattggaacgtacgtcacaaggtacgaccaatccttatcaaggatacttaacgagc 17586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 27 - 218
Target Start/End: Complemental strand, 23977 - 23786
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23977 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 23878  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 218  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23877 gagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaa 23786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 1261886 - 1261639
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1261886 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 1261787  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||    
T  1261786 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcac 1261689  T
Q  227 aagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  1261688 aagaacactttaaatactagccttcctctgataaaatcgtgtcacgattt 1261639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 26288055 - 26288292
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  26288055 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaa 26288154  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||           || |||| ||||||    
T  26288155 gagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcac 26288243  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  26288244 aagaacacttaaatactagccttccactgataaaatcgtgtcacgattt 26288292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 26301312 - 26301549
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  26301312 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaa 26301411  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||           || |||| ||||||    
T  26301412 gagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcac 26301500  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  26301501 aagaacacttaaatactagccttccactgataaaatcgtgtcacgattt 26301549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 26313306 - 26313543
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  26313306 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaactcaa 26313405  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||           || |||| ||||||    
T  26313406 gagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcac 26313494  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  26313495 aagaacacttaaatactagccttccactgataaaatcgtgtcacgattt 26313543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 27 - 326
Target Start/End: Complemental strand, 33037738 - 33037441
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  33037738 aatatgaaccctaaa-gagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 33037640  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| |||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||    
T  33037639 aagagacactctctacgaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gc 33037542  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacg 323  Q
    |||||||||| ||| ||||||| || | |||||  ||||||||||||||||||  | | ||| |||||| ||||| |||||||||||  ||||||||| |    
T  33037541 acaagaacacaatatatactagtctccttctgaagcaatcgtgtcacgatttg--cgtccgttccaaggcatgaccagtccttatcagtgatacttaatg 33037444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 18853098 - 18852849
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || ||||||||||||||||||||||| |||||||||||||    
T  18853098 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatatttttcccaaccc 18852999  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||| ||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  ||    
T  18852998 aagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gc 18852901  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||  |||||||| ||||||||    
T  18852900 acaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt 18852849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 36979543 - 36979792
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||| |||||||     
T  36979543 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttt-cccaacct 36979641  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||   |    
T  36979642 aagagacactctctacaaagacactcaaccctttggttcccttctttgtaatccaagtttctctctctaagctcttccaagctcttctccaaaaaagaac 36979741  T
Q  225 acaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| |||||||||||||||||||||  |||||||| ||||||||    
T  36979742 acaagaacacttaaatactagccttcctctgaagcaatcgtgccacgattt 36979792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 18870492 - 18870243
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  18870492 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 18870393  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||  ||    
T  18870392 aagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccatgtttctctctctaagctcttccaagctctccttcaaaaaa--gc 18870295  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||| ||||||  |||||||| ||||||||    
T  18870294 acaagaacacaatatatactagtctttctctgaagcaatcgtgccacgattt 18870243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 4760006 - 4759756
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgttttt-cccaacc 123  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || ||||||||||||||||||||||||||||| |||||||    
T  4760006 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaacc 4759907  T
Q  124 caagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactg 223  Q
    |||||||| ||||||||||||||||||||||||   ||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||  |    
T  4759906 caagagactctctctacaaagacactcaaccctttggttacctcctttgcaatccaagattctctctctaagctcttccaagctctccttcaaacaa--g 4759809  T
Q  224 cacaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||| ||| ||||||| ||||||||||   ||||||||||||||||    
T  4759808 cacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt 4759756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 30655812 - 30656060
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  30655812 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 30655911  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||||   |    
T  30655912 aagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaag-ttctctctttaagctcttccaagctctccttcaaaaaa--ac 30656008  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||  |||||||| ||||||||    
T  30656009 acaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt 30656060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 10689073 - 10688841
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttcc---aatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 122  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||   | |  |||| || |||||||||||||||||||||||||||||||||||    
T  10689073 aatatgaaccctaaaagagaagacactagaggaagctttagatcctcccccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 10688974  T
Q  123 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaact 222  Q
    ||||||||| ||||||||||||||||||||||||   |||||||||||||| |||||||||||||| ||| ||||||||||| ||||| |||  ||||||    
T  10688973 ccaagagacactctctacaaagacactcaaccctttggttccctcctttgttatccaagtttctctttcttagctcttccaagctctctttc--aaaact 10688876  T
Q  223 gcacaagaacac-ataaatactagccttcctctga 256  Q
    |||||||||||| ||| ||||||| ||||||||||    
T  10688875 gcacaagaacacaatatatactagtcttcctctga 10688841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 31071161 - 31071035
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31071161 aatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaa 31071062  T
Q  127 gagaccctctctacaaagacactcaac 153  Q
    |||| |||| |||||||||||||||||    
T  31071061 gagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 39 - 256
Target Start/End: Original strand, 6311476 - 6311693
Alignment:
Q  39 aaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacccaagagaccctct 136  Q
    |||||||||| | |||||||||||||| ||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6311476 aaaagagaagtcactagaggaagcttttgatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactct 6311575  T
Q  137 ctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-a 235  Q
    | ||||||||||||||||||   |||||||||||||  ||||||| |||| ||||||||||||||||| |||||  ||||||||  |||||||||||| |    
T  6311576 caacaaagacactcaaccctttggttccctcctttgctatccaag-ttctatctctaagctcttccaagctctctctcaaaaaa--gcacaagaacacaa 6311672  T
Q  236 taaatactagccttcctctga 256  Q
    || ||||||| ||||||||||    
T  6311673 tatatactagtcttcctctga 6311693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 7412532 - 7412666
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  7412532 aggaagcttttgatcctttcaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    || |||| |||||||||||||||||||||||||||||    
T  7412630 taaagttacctcctttgtaatccaagtttctctctct 7412666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 4456195 - 4456354
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| | | |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  4456195 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttctaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 4456291  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4456292 atcctcactacagagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 4456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 93 - 275
Target Start/End: Complemental strand, 7289831 - 7289651
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  7289831 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 7289733  T
Q  193 aagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||| ||||| |||||||||  |||||||||||| ||| ||||||| ||||||||||   ||||||| ||||||||    
T  7289732 aagctcttccaagctctctttcaaaaaa--gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgattt 7289651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 19175674 - 19175528
Alignment:
Q  41 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 140  Q
    |||||||||| | | ||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||||||  ||||| |||||||| |||| ||||    
T  19175674 aagagaagacacaaaaggaaacttttgatccttccaatagtgaaatctcactacccaaggtgtttacaatgttt--cccaatccaagagatcctcactac 19175577  T
Q  141 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19175576 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctctc 19175528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 4696502 - 4696379
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||  ||    
T  4696502 gatctttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttatct 4696405  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  4696404 cctttgtaatccaagtttctctctct 4696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 5702374 - 5702251
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  5702374 gatcattccaatggtgaaatctcactacccaaggtgtttacaatattt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 5702277  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  5702276 cctttgtaatccaagtttctctctct 5702251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 23799470 - 23799347
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||| |||| |||    
T  23799470 gatccttccaatggtgaaatctccctactcaaggtgtttacaatgttc--cccaacccaagagatcctctctacaaagacactcaaccctaaagttacct 23799373  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  23799372 cctttgtaatccaagtttctctctct 23799347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 19752288 - 19752163
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||  | |||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  19752288 gatccttccaatgatgaaatctcactacccaaggtgtttacaatattt--cacaacccaagagaacctcactacaaagacactcaaccctaaagttacct 19752191  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||  ||||||||||||||||||||    
T  19752190 cctttgcgatccaagtttctctctctaa 19752163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 26403123 - 26402991
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccct-agagttc 163  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| |||||||||||||||||||| | ||||     
T  26403123 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctaaaagtta 26403026  T
Q  164 cctcctttgtaatcc-aagtttctctctctaagct 197  Q
    ||||||||||| ||| | ||||||||||| |||||    
T  26403025 cctcctttgtattcctaggtttctctctcaaagct 26402991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 3051323 - 3051447
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| |||||||||||||||||||||||||||| || ||||||||  ||||||||| ||||||| || | ||||||||||||||||||||| ||||| ||    
T  3051323 gatctttccaatggtgaaatctcactacccaagatgtttacaatg--tttcccaactcaagagaaccccactacaaagacactcaaccctaaagttctct 3051420  T
Q  167 cctttgtaat-ccaagtttctctctct 192  Q
    ||||| || | ||||||||||||||||    
T  3051421 cctttatagtcccaagtttctctctct 3051447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 28307766 - 28307889
Alignment:
Q  68 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctc 167  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||  |||||||||| |||||| ||   ||||||||||||||||| ||| |||| ||||    
T  28307766 atccttccaattgtgaaatctcactacccaaggtgttaacaatg--tttcccaacctaagagaaccgtgctacaaagacactcaactctaaagttacctc 28307863  T
Q  168 ctttgtaatcc-aagtttctctctct 192  Q
    ||||||||||| ||||||||||||||    
T  28307864 ctttgtaatcctaagtttctctctct 28307889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 9054314 - 9054188
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||  ||| ||||||| |||||||| |||| |||| |||    
T  9054314 gatccttccaatggtgaaatctcactacccaaggtgattataatgtttt--ccaacccaagagaatctcactacaaaaacactcaatcctaaagttacct 9054217  T
Q  167 cctttgta-atccaagtttctctctctaa 194  Q
      ||||||  |||||||||||||| ||||    
T  9054216 tatttgtatttccaagtttctctccctaa 9054188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 15290401 - 15290298
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 320  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||  | | |||||||||| |  || |||||||||||||||||||||    
T  15290401 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg--cgtccgtcccaaggaactaccagtccttatcaaggatactta 15290304  T
Q  321 acgagc 326  Q
    ||||||    
T  15290303 acgagc 15290298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 15470770 - 15470667
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 320  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||  | | |||||||||| |  || |||||||||||||||||||||    
T  15470770 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg--cgtccgtcccaaggaactaccagtccttatcaaggatactta 15470673  T
Q  321 acgagc 326  Q
    ||||||    
T  15470672 acgagc 15470667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 6127426 - 6127515
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccct 156  Q
    ||||||||||||||||||||||||||||||||  || ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||    
T  6127426 gatccttccaatggtgaaatctcactacccaaaatgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccct 6127515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 5990446 - 5990333
Alignment:
Q  76 aatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgta- 174  Q
    |||||||||||||||| | ||||| |||||||||||  ||||||||||||||||| |||| ||  ||||||||||||||||| |||| ||  |||||||     
T  5990446 aatggtgaaatctcacaaaccaagatgattacaatg--tttcccaacccaagagaacctcact--aaagacactcaaccctaaagttaccgtctttgtat 5990351  T
Q  175 atccaagtttctctctct 192  Q
     |||||||||||||||||    
T  5990350 ttccaagtttctctctct 5990333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 25328058 - 25327996
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||    
T  25328058 acccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaaccc 25327996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 25328184 - 25328122
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||    
T  25328184 acccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaaccc 25328122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 25689841 - 25689764
Alignment:
Q  196 ctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||| |||| ||||||| |  ||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  25689841 ctcttccaacctcttcttcaaaga--tgcacaagaacacttaaatactagccttcctctgttgcaatcgtgtcacgattt 25689764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 7493067 - 7492979
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaacccta 157  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||||  |||||||| |||||||| |||| |||||||  | ||||||||||    
T  7493067 gatccttctaattgtgaaatctcactacccaaggtgtttacaatg--tttcccaatccaagagaacctcactacaaatgctctcaacccta 7492979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 31043190 - 31043131
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||| |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  31043190 aaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 31043131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 1261611 - 1261569
Alignment:
Q  284 gtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  1261611 gtcccaaggtatgaccagtccttatcaaggatacttaacgagc 1261569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 9765720 - 9765617
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaaccc--aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaat-ccaagtttctctc 189  Q
    |||||||||| |||||||||||  ||||||||  |||||| |||| || |||||||||||||||||  |||| ||||||||||| | |||||||||||||    
T  9765720 acccaaggtgtttacaatgttt--cccaaccctcaagagaacctcact-caaagacactcaaccctcaagttacctcctttgtattcccaagtttctctc 9765624  T
Q  190 tctaagc 196  Q
    || ||||    
T  9765623 tcaaagc 9765617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 42575689 - 42575754
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  42575689 caatcgtgtcacgatttg--cgtccgtcccaaggaaagaccagtccttatcaaggatacttaacgagc 42575754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 4759727 - 4759688
Alignment:
Q  287 ccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  4759727 ccaaggtatgaccagtccttatcaaggatacttaacgagc 4759688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 39784728 - 39784685
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  39784728 cccaaggtgattacaatgtttttcccaacctaagagactctctc 39784685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 42575631 - 42575686
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  42575631 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 42575686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 2627612 - 2627543
Alignment:
Q  204 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||||   |||||||||||||| |||||||||||| |||   |||| ||||||||||||||||    
T  2627612 aactctccttcaaat--ctgcacaagaacacttaaatactagccctccaacgataaaatcgtgtcacgattt 2627543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 30656088 - 30656128
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  30656088 cccaaggtttgaccagtccttatcaaggatacttaacgagc 30656128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 4731629 - 4731532
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 191  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |  | ||||||||||||||    
T  4731629 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttttcaagtttctctctc 4731533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 13204670 - 13204558
Alignment:
Q  74 ccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgt 173  Q
    |||| |||||||||||||||||||||||| |||||||           ||||||||| ||||  |||||||||| | || | || |||| ||||||||||    
T  13204670 ccaacggtgaaatctcactacccaaggtgtttacaat-----------cccaagagaacctcattacaaagacatttaaacataaagttacctcctttgt 13204582  T
Q  174 a-atccaagtttctctctctaagc 196  Q
    |  |||||||||||||||||||||    
T  13204581 atttccaagtttctctctctaagc 13204558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 41266918 - 41266841
Alignment:
Q  116 tcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctctct 192  Q
    ||||||||||||||| ||||||  |||||||| ||||||||| |||| |||| ||||  |||| | ||||||||||||    
T  41266918 tcccaacccaagagaacctctcaccaaagacattcaaccctaaagttacctcatttgatatcctaggtttctctctct 41266841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 43036394 - 43036297
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 191  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  43036394 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 43036298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 36979820 - 36979860
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  36979820 cccaaggtatgaccagtccttatcagagatacttaacgagc 36979860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 27 - 326
Target Start/End: Original strand, 35387827 - 35388144
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35387827 aatatgaaccctaaaagagaagacactagaggaagttttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttttttccaacccaa 35387926  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||||||    
T  35387927 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctctaagctcttccaagctctc-ttccaaaatctgcac 35388025  T
Q  227 aagaacacataaatactagccttcctctgatacaatcg-------------------tgtcacgatttgaacatacgtcccaaggtatgactagtcctta 307  Q
    |||||||| ||||||||||||||||||||||| |||||                   ||||||||||||||| |||||||||||||||||| ||||||||    
T  35388026 aagaacacttaaatactagccttcctctgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtacgtcccaaggtatgaccagtcctta 35388125  T
Q  308 tcaaggatacttaacgagc 326  Q
    |||||||||||||||||||    
T  35388126 tcaaggatacttaacgagc 35388144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 38219563 - 38219805
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38219563 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaa 38219662  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| |||| ||||||    
T  38219663 gagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttcaaagctcttcttc-aaaatctgcac 38219761  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||     ||||||||||||||||||| ||| ||||||||||||    
T  38219762 aagaacac-----tactagccttcctctgataaaattgtgtcacgattt 38219805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 31 - 275
Target Start/End: Original strand, 24136017 - 24136261
Alignment:
Q  31 tgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  24136017 tgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaacccaagag 24136116  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaag 229  Q
    || || |||||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||  ||||||||    
T  24136117 acactttctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctcttagctcttccaagctctactccaaaaa--tgcacaag 24136214  T
Q  230 aacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||  || |||||||| ||||||||||||||||||| ||||||||    
T  24136215 aacactttatatactagctttcctctgatacaatcgtgccacgattt 24136261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 31180379 - 31180626
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  31180379 aatatgaaccataaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 31180478  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| |||||||||||||||||||||| | |  |||||||||   ||    
T  31180479 aagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaag-ttctctctctaagctcttccaagccccgcttcaaaaa---gc 31180574  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||  |||||||| ||||||||    
T  31180575 acaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt 31180626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 30 - 275
Target Start/End: Original strand, 15464700 - 15464934
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    ||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||  ||||||||||||||||    
T  15464700 atgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacgatg--tttcccaacccaagag 15464797  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaag 229  Q
    | |||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||        | ||| |||||| || |||| |||||||||    
T  15464798 atcctcactacaaagacactcaaccctaaagtttccttctttgtaatccaagtttctctctc--------ttcaagctctcc-tccaaaatctgcacaag 15464888  T
Q  230 aacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||| |||||||||| ||||  |||||| ||||||| ||||||||    
T  15464889 aacacttaaatactagtcttctactgataaaatcgtgccacgattt 15464934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 30 - 275
Target Start/End: Complemental strand, 36932279 - 36932046
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    ||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  36932279 atgaaccctaaaacagaagacacaagaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagag 36932182  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaag 229  Q
    | | || ||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    ||     | |||||| || ||||||||||||||    
T  36932181 atcatcactataaagacactcaaccctaaagttccctcctttgcaatccaagtttctctctct----tc-----agctctcc-tccaaaaactgcacaag 36932092  T
Q  230 aacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||| ||||||| || ||||  |||||| ||||||| ||||||||    
T  36932091 aacacttaaataccagtcttcagctgataaaatcgtgccacgattt 36932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 40 - 192
Target Start/End: Complemental strand, 9353253 - 9353103
Alignment:
Q  40 aaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 139  Q
    ||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||    
T  9353253 aaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcacta 9353156  T
Q  140 caaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  9353155 caaagacacttaaccctaaagttacctcctttgtaatccaagtttctctctct 9353103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 14520396 - 14520556
Alignment:
Q  29 tatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaaga 128  Q
    ||||||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  14520396 tatgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgttt--cccaacccaaga 14520492  T
Q  129 gaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    || |||| ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  14520493 gatcctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctctct 14520556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 28832460 - 28832585
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||| ||| |||| |||    
T  28832460 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaactctaaagttacct 28832557  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||||||    
T  28832558 cctttgtaatccaagtttctctctctaa 28832585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 11916877 - 11916746
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||| |||||||||    
T  11916877 aggaagtttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagaaactcaaccc 11916780  T
Q  156 tagagttccctcctttgtaatccaagtttctctc 189  Q
    || |||| ||||||||||||||||||||||||||    
T  11916779 taaagttacctcctttgtaatccaagtttctctc 11916746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 31300494 - 31300364
Alignment:
Q  62 ctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagt 161  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||| |||| |||||||||||||||||| || |||    
T  31300494 cttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctc--aacccaagagaacctcactacaaagacactcaaccttaaagt 31300397  T
Q  162 tccctcctttgtaatccaagtttctctctctaa 194  Q
    | ||||||||| |||||||||||||||||||||    
T  31300396 tacctcctttgcaatccaagtttctctctctaa 31300364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 24553421 - 24553296
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||  |||| |||    
T  24553421 gatccttctaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacccttaagttacct 24553324  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    |||||||||||||||||||| |||||||    
T  24553323 cctttgtaatccaagtttctttctctaa 24553296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 11181726 - 11181603
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||| || |||| |||    
T  11181726 gatccttccaatggtgaaatttcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccataaagttacct 11181629  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||| ||||||||||||||||    
T  11181628 cctttgtaaaccaagtttctctctct 11181603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 17003853 - 17003730
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  || ||||||||||| |||| ||||||||||| ||||||||| ||||  ||    
T  17003853 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--ccaaacccaagagaacctcactacaaagacattcaaccctaaagttatct 17003756  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  17003755 cctttgtaatccaagtttctctctct 17003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 30631572 - 30631730
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatct--cactacccaaggtgattacaatgtttttcccaacc 123  Q
    ||||||||||||||| |||||| | |||||||||||||||||||||||||| |  |||| ||   |||||||||||||||||||||||||||||||||||    
T  30631572 aatatgaaccctaaa-gagaagtcactagaggaagctttagatccttccaactaatgaactcctccactacccaaggtgattacaatgtttttcccaacc 30631670  T
Q  124 caagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtt 183  Q
    |||||||| ||||| |||||||||||||||||    |||||||||||||| |||||||||    
T  30631671 caagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaagtt 30631730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 42127264 - 42127139
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||  ||||||||||| |||| ||||||||| |||||||| || |||| |||    
T  42127264 gatccttccaatggtgaaatctcactacccaaggtgtatacaatgtttctc--aacccaagagaacctcactacaaagatactcaaccttaaagttacct 42127167  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||| ||||||    
T  42127166 cctttgtaatccaagtttctcactctaa 42127139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 1457067 - 1456952
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  1457067 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 1456969  T
Q  193 aagctcttccaaactct 209  Q
    |||||||||||| ||||    
T  1456968 aagctcttccaagctct 1456952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 10281955 - 10282085
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||  ||||||| |||| ||||||||||||||||||||| |||| |    
T  10281955 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcacaaccctcaagagaacctcactacaaagacactcaaccctaaagttac 10282052  T
Q  165 ctcctttgtaatc-caagtttctctctctaagc 196  Q
    |||||||||| || |||||||||||||| ||||    
T  10282053 ctcctttgtattctcaagtttctctctcaaagc 10282085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 12084071 - 12083951
Alignment:
Q  68 atccttccaa-tggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||| ||||||| ||||||||||||||||| ||| |||||||   ||||||||||||| |||| ||| ||||||||||||||||| |||| |||    
T  12084071 atccttccaaatggtgaattctcactacccaaggtgtttaaaatgttta--ccaacccaagagatcctcactataaagacactcaaccctaaagttacct 12083974  T
Q  167 cctttgtaatccaagtttctctc 189  Q
    |||||||||||||||||||||||    
T  12083973 cctttgtaatccaagtttctctc 12083951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 27445150 - 27445254
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  27445150 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 27445248  T
Q  193 aagctc 198  Q
    ||||||    
T  27445249 aagctc 27445254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 27449994 - 27450098
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  27449994 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 27450092  T
Q  193 aagctc 198  Q
    ||||||    
T  27450093 aagctc 27450098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 43592459 - 43592563
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  43592459 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 43592557  T
Q  193 aagctc 198  Q
    ||||||    
T  43592558 aagctc 43592563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 43598904 - 43599008
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  43598904 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 43599002  T
Q  193 aagctc 198  Q
    ||||||    
T  43599003 aagctc 43599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 43604396 - 43604500
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  43604396 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 43604494  T
Q  193 aagctc 198  Q
    ||||||    
T  43604495 aagctc 43604500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 43609888 - 43609992
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  43609888 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 43609986  T
Q  193 aagctc 198  Q
    ||||||    
T  43609987 aagctc 43609992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 178
Target Start/End: Complemental strand, 7160798 - 7160689
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||  ||||| |||||||| |||| ||||||||||||||||||||| |||| |||    
T  7160798 gatccttccaatgatgaaatctcactgtccaaggtgattacaatgttt--cccaatccaagagaacctcactacaaagacactcaaccctaaagttacct 7160701  T
Q  167 cctttgtaatcc 178  Q
    | ||||||||||    
T  7160700 catttgtaatcc 7160689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 19588948 - 19589051
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| | || |||    
T  19588948 gatccttccaatggtgaaatctcactgcccaagatgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaaattacct 19589045  T
Q  167 cctttg 172  Q
    ||||||    
T  19589046 cctttg 19589051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 29720225 - 29720121
Alignment:
Q  222 tgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaa 321  Q
    ||||||||||||| |||||||  ||||||| |||||| ||||||||||||||| |  ||| |||||||||||||||| ||||||||||| ||| ||||||    
T  29720225 tgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaa 29720126  T
Q  322 cgagc 326  Q
    |||||    
T  29720125 cgagc 29720121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 216 - 326
Target Start/End: Complemental strand, 16407906 - 16407796
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 315  Q
    |||| ||||||||||| || |||||||||||| ||| |||||| ||||||||||||||| || | |||||||||||||| |||  |||||||||| |||     
T  16407906 aaaatctgcacaagaatacttaaatactagccctccactgataaaatcgtgtcacgattggagcgtacgtcccaaggtacgaccggtccttatcatggaa 16407807  T
Q  316 acttaacgagc 326  Q
    |||||||||||    
T  16407806 acttaacgagc 16407796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 15044865 - 15044956
Alignment:
Q  93 acccaaggtgattacaatgtttttccc-aacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtt 183  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    |||||||||||||  |||||||||    
T  15044865 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 15044956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 326
Target Start/End: Complemental strand, 16409342 - 16409232
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 315  Q
    |||| |||||||||||||| |||||||||||  ||| || ||| ||||||||||||||| || | |||||||||| ||| ||| ||||||||||| |||     
T  16409342 aaaatctgcacaagaacacttaaatactagctctccactaataaaatcgtgtcacgattggagcgtacgtcccaatgtacgaccagtccttatcatggaa 16409243  T
Q  316 acttaacgagc 326  Q
    |||||||||||    
T  16409242 acttaacgagc 16409232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 3880503 - 3880634
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||| ||    | ||||||| |||| |||||| |||||||||| ||  |||| |||    
T  3880503 gatccttccaatggtgaaatctcacaacccaatgtgtttacaatgtttctcaaccctcaagagaacctcactacaaggacactcaactctcaagttacct 3880602  T
Q  167 cctttgtaatcc-aagtttctctctctaagct 197  Q
    |||||||| ||| | ||||||||||| |||||    
T  3880603 cctttgtattcctaggtttctctctcaaagct 3880634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 24136284 - 24136329
Alignment:
Q  281 tacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  24136284 tacgtcccaaggtatgaccagtccttatcaaggatacttaacgagc 24136329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 9789515 - 9789584
Alignment:
Q  204 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||||   |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  9789515 aactctccttcaaat--ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 9789584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 18441939 - 18442008
Alignment:
Q  204 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||||   |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  18441939 aactctccttcaaat--ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 18442008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 33030824 - 33030728
Alignment:
Q  75 caatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgta 174  Q
    ||||||||||||||||||||||||| |||||||||  | |||| |||||||||||| ||||  |||||| | ||||||||||| |||| |||| ||||||    
T  33030824 caatggtgaaatctcactacccaagatgattacaa--tatttctcaacccaagagaacctcgttacaaa-atactcaaccctaaagttacctcttttgta 33030728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 29751526 - 29751590
Alignment:
Q  260 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||||||  | |||  ||||||||||||| |||||||||||||||||||||||||||    
T  29751526 aatcgtgtcacgatttg--cgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagc 29751590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 26170641 - 26170584
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgat 273  Q
    |||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  26170641 aaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgat 26170584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 16544213 - 16544148
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  16544213 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 16544148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 16546435 - 16546370
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  16546435 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 16546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 25077925 - 25077860
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  25077925 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 25077860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 25135894 - 25135829
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  25135894 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 25135829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 29722401 - 29722332
Alignment:
Q  204 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||||   |||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||    
T  29722401 aactctccttcaaat--ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 40379897 - 40379832
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  40379897 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 40379832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 40382108 - 40382043
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  40382108 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 40382043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 26177750 - 26177691
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||| |||| ||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  26177750 aaaatctgcgcaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 26177691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 42127304 - 42127269
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtg 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  42127304 gatccttccaatggtgaaatctcactacccaaggtg 42127269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 16544271 - 16544217
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  16544271 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 16544217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 16546493 - 16546439
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  16546493 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 16546439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 25077983 - 25077929
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  25077983 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 25077929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 25135952 - 25135898
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  25135952 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 25135898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 40379955 - 40379901
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  40379955 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 40379901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 40382166 - 40382112
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  40382166 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 40382112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 43599043 - 43599095
Alignment:
Q  224 cacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||| || ||||||||||||||||||  |||||||||||||||||    
T  43599043 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgattt 43599095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 43604535 - 43604587
Alignment:
Q  224 cacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||| || ||||||||||||||||||  |||||||||||||||||    
T  43604535 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgattt 43604587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 43610027 - 43610079
Alignment:
Q  224 cacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||| || ||||||||||||||||||  |||||||||||||||||    
T  43610027 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgattt 43610079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 28807479 - 28807436
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  28807479 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 28807436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 10593120 - 10593066
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| || ||||||| ||||||||| |  ||||||||||||||||    
T  10593120 ctgcacaagaacacttacatactagtcttcctctgttgaaatcgtgtcacgattt 10593066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 13488174 - 13488077
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 191  Q
    |||||||||| ||||||||||||  |||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  13488174 acccaaggtgtttacaatgtttt--ccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 13488078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 27445291 - 27445344
Alignment:
Q  223 gcacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||| || ||||||||||||||||||  |||||||| ||||||||    
T  27445291 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgattt 27445344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 27450134 - 27450187
Alignment:
Q  223 gcacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||| || ||||||||||||||||||  |||||||| ||||||||    
T  27450134 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgattt 27450187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 29751451 - 29751521
Alignment:
Q  204 aactctccttcaaaaaactgcacaagaacacataa-atactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |  ||||||||||||| | | |||||||||||||||| |  |||||||||||||||||    
T  29751451 aactctccttcaaaga--tgcacaagaacactttatatactagccttcctctaaagcaatcgtgtcacgattt 29751521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 43592597 - 43592650
Alignment:
Q  223 gcacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||| || ||||||||||||||| ||  |||||||||||||||||    
T  43592597 gcacaagaacacaatatatactagccttcctccgaagcaatcgtgtcacgattt 43592650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 26170576 - 26170512
Alignment:
Q  262 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |  | | |||||||||||| ||| ||||||||||| ||| |||||||||||    
T  26170576 tcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagc 26170512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 26177685 - 26177621
Alignment:
Q  262 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |  | | |||||||||||| ||| ||||||||||| ||| |||||||||||    
T  26177685 tcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagc 26177621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 24202701 - 24202455
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24202701 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgagatctcactacccaaggtgattacaatgtttttcccaacccaa 24202602  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||  || ||||  |||||    
T  24202601 gagacactctctacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc--tccaaaatatgcac 24202504  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24202503 aagaacacttaaatactagccttcctctgatacaatcgtgtcacgattt 24202455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 27 - 326
Target Start/End: Complemental strand, 19361364 - 19361067
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  19361364 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt-cccaacccaa 19361266  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |||| ||||||    
T  19361265 gagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctcc-tccaaaatctgcac 19361167  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||| |||||||||| ||||| |||||| ||||||||||||||| | || |||||| ||||||| |||  |||||||||  ||| |||||||||||    
T  19361166 aagaacacttaaatactagtcttccactgataaaatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagc 19361067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 19366240 - 19365993
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  19366240 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaa 19366141  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||    
T  19366140 gagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcc-tccaaaatctgcac 19366042  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  19366041 aagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 19365993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 19358775 - 19358530
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  19358775 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt-cccaacccaa 19358677  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
     ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||    
T  19358676 aagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcc-tccaaaatctgcac 19358578  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgatt 274  Q
    |||||||| |||||||||| ||||| |||||| |||||||||||||||    
T  19358577 aagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt 19358530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 24787295 - 24787047
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || ||||| ||||||||||||| |||||||||||||||||    
T  24787295 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactgcccaaggtgattataatgtttttcccaaccc 24787196  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||  ||    
T  24787195 aagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaag-ttctctctctaagctcttccaagctctccttcaaaaaa--gc 24787099  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||  |||||||| ||||||||    
T  24787098 acaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt 24787047  T

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Target: chr1; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 13604552 - 13604393
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  13604552 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 13604456  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  13604455 atcctcactacaaagatactcaaccctaaagttccctcctttgtaatccaagtttctctctct 13604393  T

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Target: chr1; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 47098719 - 47098594
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  47098719 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcgctacaaagacactcaaccctaaagttacct 47098622  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||||||    
T  47098621 cctttgtaatccaagtttctctctctaa 47098594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 41 - 189
Target Start/End: Original strand, 3281884 - 3282030
Alignment:
Q  41 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 140  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||| ||||    
T  3281884 aagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactac 3281981  T
Q  141 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    |||||||||||||| || |||| |||| |||||||||||||||||||||    
T  3281982 aaagacactcaaccataaagttacctcatttgtaatccaagtttctctc 3282030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 21536490 - 21536344
Alignment:
Q  41 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 140  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||| |||||| |||| ||||    
T  21536490 aagagaagacacaaaaggaagctttcgatccttccaatggtgaaatcttactacccaaggtgtttacaatgtttt--ccaacctaagagatcctcactac 21536393  T
Q  141 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  21536392 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctctc 21536344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 37069943 - 37070093
Alignment:
Q  40 aaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 139  Q
    ||||||||||| | | |||||||||| |||||||||||||||||||||||| || |||||||| |||||||||||  |||||||||||||| |||| |||    
T  37069943 aaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcattatccaaggtgtttacaatgttt--cccaacccaagagatcctcacta 37070040  T
Q  140 caaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  37070041 caaagacactcaaccataaagttacctcctttgtaatccaagtttctctctct 37070093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 47102733 - 47102608
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  47102733 gatccttccaatgatgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacct 47102636  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||||||    
T  47102635 cctttgtaatccaagtttctctctctaa 47102608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 67 - 190
Target Start/End: Original strand, 29652016 - 29652137
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||| |||| ||||||||||||||||||||| |||| |||    
T  29652016 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaaaagatcctcactacaaagacactcaaccctaaagttacct 29652113  T
Q  167 cctttgtaatccaagtttctctct 190  Q
    ||||||||||||||||||||||||    
T  29652114 cctttgtaatccaagtttctctct 29652137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 32889632 - 32889766
Alignment:
Q  58 gaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaacccta 157  Q
    |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| | | |||| |||||||||||||||||||||    
T  32889632 gaagcttttgaaccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaaaaaaacctcactacaaagacactcaacccta 32889729  T
Q  158 gagttccctcctttgtaatccaagtttctctctctaa 194  Q
     |||| ||||||||| |||||||||||||||||||||    
T  32889730 aagttacctcctttgcaatccaagtttctctctctaa 32889766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 41 - 192
Target Start/End: Complemental strand, 26644818 - 26644669
Alignment:
Q  41 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 140  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||| ||| | || ||||    
T  26644818 aagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactactcaaggtgtttacaatg--tttcccaacccaaaagatcttcactac 26644721  T
Q  141 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||| | ||  ||||||||||||||||||||||||||||    
T  26644720 aaagacactcaaccctaaaattatctcctttgtaatccaagtttctctctct 26644669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 13598603 - 13598726
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||| |||| |||||||||||||||||| || |||| |||    
T  13598603 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttg--ccaacccaagagatcctcactacaaagacactcaaccataaagttacct 13598700  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    |||||||||||||| |||||||||||    
T  13598701 cctttgtaatccaattttctctctct 13598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 27104291 - 27104171
Alignment:
Q  71 cttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctt 170  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||| || |||||||||||||||||| || |||| |||||||    
T  27104291 cttccaatggtgaaatctcactacccaaggtgcttataatgttt--cccaacccaagagacc-tcactacaaagacactcaaccttaaagttacctcctt 27104195  T
Q  171 tgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||    
T  27104194 tgtaatccaagtttctctctctaa 27104171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 9476465 - 9476590
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||| |||||||||||||||||||||||| || |||||||||||  ||||||| |||||| |||| ||||||||||| ||||||| | |||| |||    
T  9476465 gatccttcaaatggtgaaatctcactacccaagatgtttacaatgttt--cccaaccaaagagaacctcactacaaagacattcaacccaaaagttacct 9476562  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||||||    
T  9476563 cctttgtaatccaagtttctctctctaa 9476590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 19380004 - 19379916
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttt 115  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19380004 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt 19379916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 40816710 - 40816580
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  40816710 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 40816613  T
Q  165 ctcctttgtaat-ccaagtttctctctctaagc 196  Q
    |||||||||| | ||||||||||||||| ||||    
T  40816612 ctcctttgtattcccaagtttctctctcaaagc 40816580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 47703824 - 47703699
Alignment:
Q  72 ttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttccctcct 169  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||| |||| ||||||    
T  47703824 ttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcct 47703727  T
Q  170 ttgtaatc-caagtttctctctctaagc 196  Q
    ||||| || |||||||||||||| ||||    
T  47703726 ttgtattctcaagtttctctctcaaagc 47703699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 216 - 326
Target Start/End: Complemental strand, 51765255 - 51765145
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 315  Q
    |||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| | || |||||| ||||||||||| ||||||||||| |||     
T  51765255 aaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattggtacgtacgtcacaaggtatgaccagtccttatcatggaa 51765156  T
Q  316 acttaacgagc 326  Q
    |||||||||||    
T  51765155 acttaacgagc 51765145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 19073131 - 19073256
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  19073131 gatccttccaatggtgaaatctcactatccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 19073228  T
Q  165 ctcctttgtaat-ccaagtttctctctc 191  Q
    |||||||||| | |||||||||||||||    
T  19073229 ctcctttgtattcccaagtttctctctc 19073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 19121021 - 19121146
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  19121021 gatccttccaatggtgaaatctcactatccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 19121118  T
Q  165 ctcctttgtaat-ccaagtttctctctc 191  Q
    |||||||||| | |||||||||||||||    
T  19121119 ctcctttgtattcccaagtttctctctc 19121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 190
Target Start/End: Original strand, 22819634 - 22819756
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||| || |||| |||| |||    
T  22819634 gatccttccaatggtgaaatgtaactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactaaatcctaaagttacct 22819731  T
Q  167 cctttgt-aatccaagtttctctct 190  Q
    ||||||| || ||||||||||||||    
T  22819732 cctttgtaaacccaagtttctctct 22819756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 41398415 - 41398506
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |   |||||||||||||  |||||||||    
T  41398415 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagtt 41398506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 41390760 - 41390819
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaa 152  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  41390760 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 41390819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 9022799 - 9022677
Alignment:
Q  68 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctc 167  Q
    |||||||||||||||||||||||||||  |||||| ||||||||  |||| |||||||||||| |||| ||||||||||| |||| || | || | ||||    
T  9022799 atccttccaatggtgaaatctcactacgaaaggtgtttacaatg--tttctcaacccaagagaacctcactacaaagacattcaa-ccaaaagatacctc 9022703  T
Q  168 ctttgt-aatccaagtttctctctct 192  Q
    |||||| || ||||||||||||||||    
T  9022702 ctttgtaaacccaagtttctctctct 9022677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 16124408 - 16124342
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctc 135  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||    
T  16124408 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctc 16124342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 40282179 - 40282114
Alignment:
Q  261 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||| |  ||| |||||||||||||||| ||||||||||| ||| |||||||||||    
T  40282179 atcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagc 40282114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 20622626 - 20622666
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  20622626 cccaaggtatgaccagtccttatcaaggatacttaacgagc 20622666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 44203437 - 44203372
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  44203437 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 44203372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 326
Target Start/End: Complemental strand, 24202428 - 24202385
Alignment:
Q  283 cgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  24202428 cgtcccaagatatgaccagtccttatcaaggatacttaacgagc 24202385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 9987064 - 9987010
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||||||| ||| |||||| ||| ||||||||||||    
T  9987064 ctgcacaagaacacttaaatactagccctccactgataaaattgtgtcacgattt 9987010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 21053819 - 21053765
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||    
T  21053819 ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt 21053765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 40282238 - 40282184
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||    
T  40282238 ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt 40282184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 44203495 - 44203441
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  44203495 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 44203441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 9987005 - 9986940
Alignment:
Q  261 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||| |  ||| |||||||||||||||| ||||||||| | ||| |||||||||||    
T  9987005 atcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttattatggaaacttaacgagc 9986940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 21053760 - 21053695
Alignment:
Q  261 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||| |  ||| |||| ||||||||||| ||||||||||| ||| |||||||||||    
T  21053760 atcgtgtcacgattggtgcatccgtctcaaggtatgaccagtccttatcatggaaacttaacgagc 21053695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 24787019 - 24786979
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  24787019 cccaaggtttgaccagtccttatcaaggatacttaacgagc 24786979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 24793841 - 24793801
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  24793841 cccaaggtttgaccagtccttatcaaggatacttaacgagc 24793801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 1054917 - 1054874
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  1054917 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 1054874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 17345410 - 17345327
Alignment:
Q  114 tttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatc-caagtttctctctctaagc 196  Q
    |||| |||| ||||||| |||| ||||||||||||||||||||| |  | ||||||||||| || || ||||| ||||||||||    
T  17345410 tttctcaactcaagagaacctcactacaaagacactcaaccctaaatgtacctcctttgtattctcatgtttccctctctaagc 17345327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 25439801 - 25439758
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  25439801 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 25439758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 25444994 - 25444951
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  25444994 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 25444951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 39445679 - 39445722
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  39445679 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 39445722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 44023779 - 44023736
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  44023779 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 44023736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 197105 - 197181
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 172  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  197105 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 197181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 27 - 326
Target Start/End: Original strand, 21639973 - 21640269
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21639973 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaa 21640072  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  ||||    
T  21640073 gagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaata--gcac 21640170  T
Q  227 aagaacac-ataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgag 325  Q
    |||||||| ||| ||||||| || | |||||  ||||||||||||||||||  | | ||| |||||| ||||| |||||||||||  ||||||||| |||    
T  21640171 aagaacacaatatatactagtctccttctgaagcaatcgtgtcacgatttg--cgtccgttccaaggcatgaccagtccttatcagtgatacttaatgag 21640268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 21646171 - 21646418
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21646171 aatatgaaccctaaaagagaagacactagaggaagatttagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaa 21646270  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| |  | |||| ||||||    
T  21646271 gagatcctctctacaaagacactcaaccctagagtttcctcctttgtaatctaagtttctctctctaagctcttccaagctcttc-cccaaaatctgcac 21646369  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  21646370 aagaacacttaaatactagccttcctctgataaaatcgtgtcacgattt 21646418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 18413804 - 18414050
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    ||||||||||||||||| |||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  18413804 aatatgaaccctaaaag-gaagacacaagaggaagcttaagatccttccaatggtgaaatctcactacccaaggtgtttacattgtttttcccaacccaa 18413902  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||    
T  18413903 gagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcc-tccaaaatctgcac 18414001  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| |||||||||| |||||  ||||| ||| ||||||||||||    
T  18414002 aagaacacttaaatactagtcttccaatgataaaattgtgtcacgattt 18414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 1533374 - 1533126
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccca 125  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  1533374 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaaccca 1533275  T
Q  126 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgca 225  Q
    |||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||| ||| |    
T  1533274 agagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccctc--aaatctgta 1533177  T
Q  226 caagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||| ||| ||||||||||||||||||  |||||||| ||||||||    
T  1533176 caagaacactatatatactagccttcctctgaagcaatcgtgccacgattt 1533126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 18408928 - 18409174
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    ||||||||||||||||| |||||| | ||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18408928 aatatgaaccctaaaag-gaagacacaagaggaagcttaagatccttttaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaa 18409026  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |||| ||||||    
T  18409027 gagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctcc-tccaaaatctgcac 18409125  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
     ||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  18409126 gagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 18409174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 27 - 326
Target Start/End: Complemental strand, 20357478 - 20357182
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  20357478 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 20357379  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||||||   ||    
T  20357378 aagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaag-ttctctcactaagctctaccaagctctccttcaaaaa---gc 20357283  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacg 323  Q
    |||||||||| ||| ||||||| ||||||||||  |||||||| |||||||||  | |  | |||||||| ||||  |||||||||||||||||||||||    
T  20357282 acaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttg--cgtctgacccaaggtttgaccggtccttatcaaggatacttaacg 20357185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 2058132 - 2058383
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttcc---aatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaac 122  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||   | |  |||| || |||||||||||||||||||||||||||||||||||    
T  2058132 aatatgaaccctaaaagagaagacactagaggaagctttagatcctcccccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaac 2058231  T
Q  123 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaact 222  Q
    ||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||| |||| |||   ||| ||    
T  2058232 ccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaag-ttctctctctaagctcttccaagctct-cttttcaaatct 2058329  T
Q  223 gcacaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||| ||| ||||||||||||||||||  |||||||| ||||||||    
T  2058330 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgattt 2058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 2479528 - 2479662
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||| |||||||||||||||    
T  2479528 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactataaagacactcaaccc 2479625  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    || ||||||||||||||||||||||||||||||||||    
T  2479626 taaagttccctcctttgtaatccaagtttctctctct 2479662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 46516199 - 46516070
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| |||| ||||||||||||||||||||| |||| |||    
T  46516199 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaactcaagagatcctcactacaaagacactcaaccctaaagttacct 46516102  T
Q  167 cctttgtaatccaagtttctctctctaagctc 198  Q
    ||||||||||||||||||||||||||||||||    
T  46516101 cctttgtaatccaagtttctctctctaagctc 46516070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 189
Target Start/End: Original strand, 21989072 - 21989231
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    ||||||||||||||| ||||| ||  || |||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||  ||||||||||    
T  21989072 aatatgaaccctaaa-gagaaaacaataaaggaagcttatgatccttccaatggtaaaatctcactacccaaggtgtttacaatgttt--cccaacccaa 21989168  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    |||| |||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  21989169 gagatcctcactacaaagacactcaaacctaaagttacctcctttgtaatccaagtttctctc 21989231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 20284292 - 20284415
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  20284292 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacct 20284389  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||| ||||||||||||||||||||    
T  20284390 cctttataatccaagtttctctctct 20284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 23402907 - 23402784
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  23402907 gatcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacct 23402810  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  23402809 cctttgtaatccaagtttctctctct 23402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 47263833 - 47263992
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    ||||||||||||  ||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||  ||||||| |||||    
T  47263833 atgaaccctaaat-agaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtatttacaatgttt--cccaaccgaagag 47263929  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    |  ||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  47263930 attctcactacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctct 47263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 2647591 - 2647466
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||  ||    
T  2647591 gatccttccaatggtgaaatctcactacccaaggtgcttaccatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttatct 2647494  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    |||||||| |||||||||||||||||||    
T  2647493 cctttgtagtccaagtttctctctctaa 2647466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 4796562 - 4796443
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||| |||||||||||||||| |||| |||| |||    
T  4796562 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaa-cctaaagttacct 4796466  T
Q  167 cctttgtaatccaagtttctctc 189  Q
    |||||||||||||||||||||||    
T  4796465 cctttgtaatccaagtttctctc 4796443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 44848015 - 44847896
Alignment:
Q  71 cttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctt 170  Q
    ||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||||||    
T  44848015 cttccaatggtgaaatctcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctt 44847918  T
Q  171 tgtaatccaagtttctctctct 192  Q
    | ||||||||||||||||||||    
T  44847917 tataatccaagtttctctctct 44847896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 2580593 - 2580717
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||| | ||||||||||||||||||| |||| |||    
T  2580593 gatcctttcaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaagagaacctcac-acaaagacactcaaccctaaagttacct 2580689  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    |||||| |||||||||||||||||||||    
T  2580690 cctttgcaatccaagtttctctctctaa 2580717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 9189901 - 9189775
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaag-acactcaaccctagagttccc 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||  |||||||| ||||||||||||| ||||  |    
T  9189901 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagaaccttactacaaagaacactcaaccctaaagttatc 9189804  T
Q  166 tcctttgtaatccaagtttctctctctaa 194  Q
    ||||||| |||||||||||||||||||||    
T  9189803 tcctttgcaatccaagtttctctctctaa 9189775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 9185068 - 9184943
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||  ||||||||| ||||||||||| |||| |||    
T  9185068 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaaccttactacaaagatactcaaccctaaagttacct 9184971  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    |||||| |||| | ||||||||||||||    
T  9184970 cctttgcaatcaatgtttctctctctaa 9184943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 3047457 - 3047581
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||| ||||||||||||||||||| |||||| | |||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  3047457 gatccttccaatgatgaaatctcactacccaagatgattatagtgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacct 3047554  T
Q  167 cctttgtaat-ccaagtttctctctct 192  Q
    |||||||||| ||||||||||||||||    
T  3047555 cctttgtaatcccaagtttctctctct 3047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 4873310 - 4873424
Alignment:
Q  95 ccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||| ||||||| ||||||||||||    
T  4873310 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaag-ttctctctctaa 4873408  T
Q  195 gctcttccaaactctc 210  Q
    |||||||||| |||||    
T  4873409 gctcttccaagctctc 4873424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 33332344 - 33332221
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| ||  ||||||||||| |||  ||||||| ||||||||||||| |||| |||    
T  33332344 gatccttccaatggtgaaatctcactacccaagatgtttacaatgtttctc--aacccaagagaaccttactacaaaaacactcaaccctaaagttacct 33332247  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    |||||||||||||||||||| |||||    
T  33332246 cctttgtaatccaagtttctatctct 33332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 5817164 - 5817036
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||  |||||||||| || ||| |||| |||||||||||||||||| || |||| |||    
T  5817164 gatccttccaatggtgaaatctcactccccaaggtatttacaatg--tttcccaaccaaatagaacctcactacaaagacactcaaccataaagttacct 5817067  T
Q  167 cctttgtaat-ccaagtttctctctctaagc 196  Q
    |||||||| | ||||||||||||||||||||    
T  5817066 cctttgtattcccaagtttctctctctaagc 5817036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 12397091 - 12397195
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  12397091 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 12397189  T
Q  193 aagctc 198  Q
    ||||||    
T  12397190 aagctc 12397195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 29160008 - 29160141
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||| ||||||||||||||| | |||| |    
T  29160008 gatccttccaatgttgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactataaagacactcaacccaaaagttac 29160105  T
Q  165 ctcctttgtaat-ccaagtttctctctctaagctct 199  Q
    |||||||||| | ||||||||||||||| |||||||    
T  29160106 ctcctttgtattcccaagtttctctctcaaagctct 29160141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 31109489 - 31109389
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtttctctctc 191  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||  |||||||||||||  |||||||||| ||||||    
T  31109489 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatatggttccctcctttgctatccaagtttttctctc 31109390  T
Q  192 t 192  Q
    |    
T  31109389 t 31109389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 32060631 - 32060734
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 320  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||    
T  32060631 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatactta 32060728  T
Q  321 acgagc 326  Q
    ||||||    
T  32060729 acgagc 32060734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 24024232 - 24024128
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  24024232 acccacggtgattacaatgtttttccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 24024134  T
Q  193 aagctc 198  Q
    ||||||    
T  24024133 aagctc 24024128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 12406513 - 12406573
Alignment:
Q  95 ccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  12406513 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 12406573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 49091918 - 49092015
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    |||||||||| || ||||||||  |||||||||||| | ||||  ||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  49091918 acccaaggtgttttcaatgttt--cccaacccaagatatcctcagtacaaagacactcaaccttaaagttacctcctttgtaatccaagtttctctctct 49092015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 21983450 - 21983536
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttt 114  Q
    ||||||||||||||| ||||| || | | |||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  21983450 aatatgaaccctaaa-gagaaaacacaaaaggaagcttatgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 21983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 43504461 - 43504566
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 320  Q
    ||||||| |||||| |||||||||||| ||| |||||| ||||||||||||||| |  |||  ||||||||||| ||| ||||||||||| ||| |||||    
T  43504461 ctgcacaggaacacttaaatactagccctccactgataaaatcgtgtcacgattggtgcatctgtcccaaggtacgaccagtccttatcatggaaactta 43504560  T
Q  321 acgagc 326  Q
    ||||||    
T  43504561 acgagc 43504566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 79640 - 79714
Alignment:
Q  118 ccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||| ||| |||| |||||||||||||||| | || |||| |||||||||||||||||||||||||||||    
T  79640 ccaacccaaaagatcctcactacaaagacactcaatcttaaagttacctcctttgtaatccaagtttctctctct 79714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 21646430 - 21646488
Alignment:
Q  268 cacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  21646430 cacgatttgaacgtacgtcccaaggtatgaccagttcttatcaaggatacttaacgagc 21646488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 326
Target Start/End: Complemental strand, 48408663 - 48408553
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 315  Q
    |||| |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||| | || |||||  ||||||| ||| ||||||||||   ||     
T  48408663 aaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattggtacgtacgttacaaggtacgaccagtccttatcctagaa 48408564  T
Q  316 acttaacgagc 326  Q
    |||||||||||    
T  48408563 acttaacgagc 48408553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 35960993 - 35961078
Alignment:
Q  41 aagagaagacgctagaggaagcttta-gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaag 127  Q
    ||||||| |||| | ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||    
T  35960993 aagagaaaacgcaaaaggaagctttttgatccttccaatggtgaaatctcactacctaaggtgtttacaatg--tttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 1562310 - 1562364
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  1562310 ctgcacaagaacacataaatactagtcttcctctgttccaatcgtgtcacgattt 1562364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 49091866 - 49091924
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaag 127  Q
    |||||||||||||||||||||||||||||||||||| || |||||  ||||||||||||||    
T  49091866 gatccttccaatggtgaaatctcactacccaaggtgttttcaatg--tttcccaacccaag 49091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 56152 - 56195
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaat 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  56152 gatccttccaatggtgaaatctcactacccaaggtgtttacaat 56195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 39731236 - 39731177
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||| |||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||    
T  39731236 aaaatctgcacaagaacacttaaatactagccttccattgataaaatcgtgtcacgattt 39731177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 9235476 - 9235398
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagaca 147  Q
    ||||||| |||||||||||| |||||| |||||||| ||||||||  |||||||||||||||||  ||| |||| ||||||    
T  9235476 gatccttgcaatggtgaaatatcactatccaaggtgtttacaatg--tttcccaacccaagagaatctcactacgaagaca 9235398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 24789727 - 24789649
Alignment:
Q  196 ctcttccaaactctccttcaaaaaactgcacaagaacacataa-atactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||| |||||||||||| |  ||||||||||||| | | ||||||||||||||||||  |||||||||||||||||    
T  24789727 ctcttccaacctctccttcaaaga--tgcacaagaacactttatatactagccttcctctgaagcaatcgtgtcacgattt 24789649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 25767253 - 25767321
Alignment:
Q  206 ctctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||  |||||||||||||| |||||||||| |||||  ||||| ||||||||||||||||    
T  25767253 ctctccttcaaaat-ctgcacaagaacacttaaatactagtcttccattgataaaatcgtgtcacgattt 25767321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 39731153 - 39731088
Alignment:
Q  261 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||| | || |||||||||||||| ||| ||||||||||| ||| |||||||||||    
T  39731153 atcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagc 39731088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 2058411 - 2058451
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  2058411 cccaaggtatgaccagtccttatcaaggatacttaacgagc 2058451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 6592702 - 6592767
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  6592702 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 6592767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 6594918 - 6594983
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  6594918 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 6594983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 18389125 - 18389190
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  18389125 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 18389190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 18392561 - 18392626
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  18392561 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 18392626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 24789621 - 24789581
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  24789621 cccaaggtatgaccagtccttatcaaggatacttaacgagc 24789581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 6592644 - 6592698
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  6592644 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 6592698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 6594860 - 6594914
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  6594860 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 6594914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 18389067 - 18389121
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  18389067 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 18389121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 18392503 - 18392557
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  18392503 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 18392557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 1533100 - 1533059
Alignment:
Q  284 gtcccaaggtatgactagtccttatcaaggatacttaacgag 325  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  1533100 gtcccaaggtataaccagtccttatcaaggatacttaacgag 1533059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 1562368 - 1562433
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||| ||||| | ||| |||||||||||||||||||||||||||    
T  1562368 caatcgtgtcacgatttg--cgtccgtcacaaggaacgaccagtccttatcaaggatacttaacgagc 1562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 21983541 - 21983578
Alignment:
Q  152 accctagagttccctcctttgtaatccaagtttctctc 189  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  21983541 accctaaagttacctcctttgtaatccaagtttctctc 21983578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 38671419 - 38671495
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 172  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  38671419 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 38671495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 1306113 - 1306360
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1306113 aatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaa 1306212  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  1306213 gagatcctcactacaaagacactcaactctagagttccctcctttataatccaagtttctctctctaagctcttccaagctctcc-tccaaaaactgcac 1306311  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  1306312 aagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 1306360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 27 - 326
Target Start/End: Complemental strand, 2671517 - 2671219
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  2671517 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 2671418  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||| ||||    
T  2671417 aagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctct--ttcacaaatctgc 2671320  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacg 323  Q
    |||||||||| ||| ||||||| ||||||||||   |||||||||||||||||  | |||  ||||||||||||| ||||||||||||||||||||||||    
T  2671319 acaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttg--cgtacaacccaaggtatgaccagtccttatcaaggatacttaacg 2671222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 8477530 - 8477780
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  8477530 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 8477629  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||    |    
T  8477630 aagagacactctctacaaagacactcaaccctttggttccctcctctgtaatccaagtttctctctctaagctcttccaagctctcttccaaaaatgaac 8477729  T
Q  225 acaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  8477730 acaagaacacttaaatactagccttcctctgaagcaatcgtgtcacgattt 8477780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 9091232 - 9090983
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||| ||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  9091232 aatatgaaccctagaagagaagacactagaggaagctttagatcctttcaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 9091133  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||  ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||    
T  9091132 aagagatactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gc 9091035  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||  |||||||| ||||||||    
T  9091034 acaagaacacaatatatactagacttcctctgaagcaatcgtgccacgattt 9090983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 40372727 - 40372478
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  40372727 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 40372628  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||  | | ||| ||||    
T  40372627 aagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc--ttacaaatctgc 40372530  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||   ||||||||||||||||    
T  40372529 acaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt 40372478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 8738994 - 8738745
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||| ||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  8738994 aatatgaaccctagaagagaagacactagaggaagctttagatcctttcaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 8738895  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||  |||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  ||    
T  8738894 aagagatactctctacaaagacactcaacccattggttccctcctttgcaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gc 8738797  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||  |||||||| ||||||||    
T  8738796 acaagaacacaatatatactagacttcctctgaagcaatcgtgccacgattt 8738745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 32143486 - 32143722
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  32143486 aatatgaaccctaaaagagaagacacaagaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaa 32143583  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||     |||||||| || |||| ||||||    
T  32143584 gagatcatcactacaaagacactcaaccctagagttccctcctttgtaatccaaatttctctctct----tc-----aactctcc-tccaaaatctgcac 32143673  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| ||||||| || ||||  |||||| ||||||||||||||||    
T  32143674 aagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt 32143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 28503795 - 28503542
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| |  |||| || ||||||||||||||||||||||| |||||||||||||    
T  28503795 aatatgaaccctaaaagagaagtcactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatatttttcccaaccc 28503696  T
Q  125 aagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt---tctctctctaagctcttccaaactctccttcaaaaaa 220  Q
    ||||||| ||||| ||||||||||||||||| |   |||||||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||||    
T  28503695 aagagacactctcaacaaagacactcaacccttttggttccctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaaaa 28503596  T
Q  221 ctgcacaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
      |||||||||||| ||| ||||||| ||||||||||  |||||||| ||||||||    
T  28503595 --gcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt 28503542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 26928522 - 26928287
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||  |||||||||||||    
T  26928522 aatatgaaccctaaaagagaagacacaagaggaagcttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatg--tttcccaacccaa 26928425  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    ||     |||||||| || |||| ||||||    
T  26928424 gagatcctcactacaaagacactcaaccctagagttccctcgtttgtaatccaagtttttctctct----tc-----aactctcc-tccaaaatctgcac 26928335  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgatt 274  Q
    |||||||| ||||||| || ||||  |||||| |||||||||||||||    
T  26928334 aagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgatt 26928287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 27 - 256
Target Start/End: Original strand, 7167410 - 7167641
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttt-tcccaacc 123  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||| ||||||||    
T  7167410 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaacc 7167509  T
Q  124 caagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactg 223  Q
    |||||||| ||||| ||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||| ||||   ||  ||| |||    
T  7167510 caagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagtttctctctctaagctcttccaagctct--atcccaaatctg 7167607  T
Q  224 cacaagaacac-ataaatactagccttcctctga 256  Q
    ||||||||||| ||| ||||||| ||||||||||    
T  7167608 cacaagaacacaatatatactagtcttcctctga 7167641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 28501628 - 28501375
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  28501628 aatatgaaccctaaaagagaagtcactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 28501529  T
Q  125 aagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt---tctctctctaagctcttccaaactctccttcaaaaaa 220  Q
    ||||||| ||||| ||||||||||||| ||| |   |||||||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||||    
T  28501528 aagagacactctcaacaaagacactcatcccttttggttccctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaaaa 28501429  T
Q  221 ctgcacaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
      ||||||| |||| ||| ||||||| ||||||||||  |||||||| ||||||||    
T  28501428 --gcacaagtacacaatatatactagtcttcctctgaagcaatcgtgccacgattt 28501375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 27986379 - 27986216
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    ||||| |||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  27986379 aatatcaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaa 27986282  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27986281 gagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 27986216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 33386595 - 33386435
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    ||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||    
T  33386595 atgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttctcaacccaagag 33386498  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  33386497 atcctcactacaaagacactcaaccctaaagttctctcctttgtaatccaagtttctctctct 33386435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 27453123 - 27453357
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||||    
T  27453123 aatatgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttgccaacccaa 27453220  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||        | ||| |||| |||| |||||||||||    
T  27453221 gagatcctcactac--agacactcaaccctaaagttccctcctttgtaatccaagtttctctctc--------ttcaagctct-cttc-aaaaactgcac 27453308  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| |||| ||||| ||||  |||||| ||||||| ||||||||    
T  27453309 aagaacacttaaaaactagtcttcaactgataaaatcgtgccacgattt 27453357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 27974871 - 27974712
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||    
T  27974871 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccgacccaagag 27974775  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  27974774 atcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 27974712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 21711414 - 21711548
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  21711414 aggaagcttttgatccttccaatggtgaaatctcactactcaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 21711511  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    || |||| |||||||||||||||||||||||||||||    
T  21711512 taaagttacctcctttgtaatccaagtttctctctct 21711548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 16264526 - 16264671
Alignment:
Q  41 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 140  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||  |||    
T  16264526 aagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcattac 16264623  T
Q  141 aaagacactcaaccctagagttccctcctttgtaatccaagtttctct 188  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  16264624 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctct 16264671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 40592665 - 40592542
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  40592665 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 40592568  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  40592567 cctttgtaatccaagtttctctctct 40592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 8370383 - 8370249
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  8370383 aggaaacttttgatccttccaatggtgaaatctcactacccaagatgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 8370286  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    || |||| |||||||||||||||||||||||||||||    
T  8370285 taaagttacctcctttgtaatccaagtttctctctct 8370249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 36029285 - 36029415
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  36029285 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36029382  T
Q  156 tagagttccctcctttgtaatccaagtttctct 188  Q
    || | || |||||||||||||||||||||||||    
T  36029383 taaatttacctcctttgtaatccaagtttctct 36029415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 41 - 192
Target Start/End: Complemental strand, 39032463 - 39032315
Alignment:
Q  41 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 140  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||||||||  ||| ||||    
T  39032463 aagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttaccaacccaagaga-tctcactac 39032367  T
Q  141 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  39032366 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 39032315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 1736187 - 1736064
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||| |||| ||||||||||||||||||||| |||| |||    
T  1736187 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaatagatcctcactacaaagacactcaaccctaaagttacct 1736090  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  1736089 cctttgtaatccaagtttctctctct 1736064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 56 - 194
Target Start/End: Complemental strand, 6794609 - 6794473
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| |||| |||||| ||||||||||||    
T  6794609 aggaagcttttgttcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaactcaagagaacctcactacaatgacactcaaccc 6794512  T
Q  156 tagagttccctcctttgtaatccaagtttctctctctaa 194  Q
    || |||| |||||||||||||||||||||||||||||||    
T  6794511 taaagttacctcctttgtaatccaagtttctctctctaa 6794473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 47923787 - 47923664
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||  ||| |||||||||||||||| |||| |||| |||    
T  47923787 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagattctcactacaaagacactcaatcctaaagttacct 47923690  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  47923689 cctttgtaatccaagtttctctctct 47923664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 26299196 - 26299316
Alignment:
Q  72 ttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctccttt 171  Q
    ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| ||||||||| |||| ||||||||    
T  26299196 ttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacattcaaccctaaagttacctccttt 26299293  T
Q  172 gtaatccaagtttctctctctaa 194  Q
     ||||||||||||||||||||||    
T  26299294 ataatccaagtttctctctctaa 26299316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 24695049 - 24694926
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| |||||||||||||||||||| |||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  24695049 gatcattccaatggtgaaatctcaccacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 24694952  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    |||||||||||||| |||||||||||    
T  24694951 cctttgtaatccaaatttctctctct 24694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 35925670 - 35925803
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||| |||| ||||||||||| |||||||    
T  35925670 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaaaagatcctcactacaaagacattcaaccc 35925767  T
Q  156 tagagttcc--ctcctttgtaatccaagtttctctc 189  Q
    || |||| |  |||||||||||||||||||||||||    
T  35925768 taaagttacatctcctttgtaatccaagtttctctc 35925803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 37725871 - 37726001
Alignment:
Q  60 agctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctaga 159  Q
    |||||| ||||||| ||||||||||||||||||| |||||||| ||| |||||||  ||| |||||||||| |||| ||||||||||||||||||||| |    
T  37725871 agcttttgatcctttcaatggtgaaatctcactatccaaggtgtttataatgttt--ccccacccaagagatcctcactacaaagacactcaaccctaaa 37725968  T
Q  160 gttccctcctttgtaatccaagtttctctctct 192  Q
    ||| |||||||||||||||||||||||||||||    
T  37725969 gtttcctcctttgtaatccaagtttctctctct 37726001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 3323574 - 3323449
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||| ||||||||||||||||| |||| |||    
T  3323574 gatcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactataaagacactcaaccctaaagttacct 3323477  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||| |||||| |||||||||    
T  3323476 cctttgtaatcgaagtttgtctctctaa 3323449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 3328240 - 3328115
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||  |||||||||||||  ||| ||||||||||| ||||||||| ||||  ||    
T  3328240 gatccttccaatgctgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaagagaagctcactacaaagacattcaaccctaaagttatct 3328143  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||| ||||||||||||||||||||||    
T  3328142 cctttctaatccaagtttctctctctaa 3328115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 190
Target Start/End: Original strand, 48438419 - 48438539
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  ||||||| |||||| |||  ||||||||||||||||||||| |||| |||    
T  48438419 gatcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacc-aagagatccttactacaaagacactcaaccctaaagttacct 48438515  T
Q  167 cctttgtaatccaagtttctctct 190  Q
    ||||||||||||||||||||||||    
T  48438516 cctttgtaatccaagtttctctct 48438539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 67 - 199
Target Start/End: Complemental strand, 3715885 - 3715752
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||| ||||||||| |||| |    
T  3715885 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacattcaaccctaaagttac 3715788  T
Q  165 ctcctttgtaatc-caagtttctctctctaagctct 199  Q
    |||||||||| || |||||||||||||| |||||||    
T  3715787 ctcctttgtattctcaagtttctctctcaaagctct 3715752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 1417374 - 1417249
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||| ||||||||||||||||||||| || ||| |||||||||||  |||||||||||| | |||| ||||||||||||||||||||| |||| |||    
T  1417374 gatcctttcaatggtgaaatctcactacctaaagtgtttacaatgttt--cccaacccaagataacctcactacaaagacactcaaccctaaagttacct 1417277  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    |||||||||| ||||||| |||||||||    
T  1417276 cctttgtaattcaagtttttctctctaa 1417249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 8126833 - 8126958
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||  |||||||||||| | |||| |||||||||||||||||  || |||| | |    
T  8126833 gatccttccaatgatgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagaaaacctcactacaaagacactcaactgtaaagttactt 8126930  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
     |||||||||||||||||||||||||||    
T  8126931 tctttgtaatccaagtttctctctctaa 8126958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 37466498 - 37466623
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| |||||||||||||||||||| |||||| ||| |||||||||||  ||||||| |||||| |||| ||||||||||||||| | ||| |||| |||    
T  37466498 gatctttccaatggtgaaatctcacaacccaaagtgtttacaatgttt--cccaacctaagagaacctcactacaaagacactcagctctaaagttacct 37466595  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||||||    
T  37466596 cctttgtaatccaagtttctctctctaa 37466623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 25929278 - 25929159
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||| ||||||||||||||||||||||| || ||||||||||||  ||||| ||||||| |||| ||||||||||||||||||||| |||| |||    
T  25929278 gatccttccgatggtgaaatctcactacccaag-tgtttacaatgtttt--ccaactcaagagaacctcactacaaagacactcaaccctaaagttacct 25929182  T
Q  167 cctttgtaatccaagtttctctc 189  Q
    ||||||||||| |||||||||||    
T  25929181 cctttgtaatctaagtttctctc 25929159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 81 - 195
Target Start/End: Complemental strand, 4386846 - 4386733
Alignment:
Q  81 tgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgta-atcca 179  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||||  | ||    
T  4386846 tgaaatctcactactcaaggtgattacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattttca 4386749  T
Q  180 agtttctctctctaag 195  Q
    ||||||||||||||||    
T  4386748 agtttctctctctaag 4386733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 25795983 - 25796113
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  25795983 gatccttccaatggtgaaatctcactacccaaggtgtttacattg--tttcccaaccctcaagagagcctcactacaaagacactcaaccctcaagttac 25796080  T
Q  165 ctcctttgtaat-ccaagtttctctctctaagc 196  Q
    |||||||||| | ||||||||||||||| ||||    
T  25796081 ctcctttgtattcccaagtttctctctcaaagc 25796113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 192
Target Start/End: Original strand, 27026925 - 27027032
Alignment:
Q  83 aaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagt 182  Q
    |||||||||||||||||||| |||||||||||  ||| | |||||||| ||||  |||||||||||||||||||| |||| |||||||||||||||||||    
T  27026925 aaatctcactacccaaggtgtttacaatgttt--ccctatccaagagatcctcagtacaaagacactcaaccctaaagttacctcctttgtaatccaagt 27027022  T
Q  183 ttctctctct 192  Q
    || |||||||    
T  27027023 ttttctctct 27027032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 192
Target Start/End: Original strand, 27038270 - 27038377
Alignment:
Q  83 aaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagt 182  Q
    ||||||||| |||||||||| |||||||||||  ||| |||||||||| |||| |||||||| |||||||||||| ||||  ||||||||||||||||||    
T  27038270 aaatctcaccacccaaggtgtttacaatgttt--ccctacccaagagatcctcactacaaaggcactcaaccctaaagttatctcctttgtaatccaagt 27038367  T
Q  183 ttctctctct 192  Q
    || |||||||    
T  27038368 ttttctctct 27038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 22173100 - 22172996
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    ||||||| |||||  ||||||| |||||| |||    
T  22173100 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctactttgctatccaag-ttctctttct 22173002  T
Q  193 aagctc 198  Q
    ||||||    
T  22173001 aagctc 22172996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 47649773 - 47649898
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||| ||||      
T  47649773 gatccttcaaatggtgaaatctaactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttat 47649870  T
Q  165 ctcctttgtaat-ccaagtttctctctc 191  Q
    |||||||||| | |||||||||| ||||    
T  47649871 ctcctttgtattcccaagtttctatctc 47649898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 23410529 - 23410624
Alignment:
Q  96 caaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaat-ccaagtttctctctct 192  Q
    ||||||| ||||||||||||  ||||||||||||| |||| ||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||    
T  23410529 caaggtgtttacaatgtttt--ccaacccaagagaacctcactacaaagacactcaaccctaaagttctctcctttgcaatcccaagtttctctctct 23410624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 40844874 - 40844977
Alignment:
Q  83 aaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagt 182  Q
    |||||||| ||| ||||||| ||||||||||| ||  ||||||| ||| |||| ||||||||||||||||||||| |||| |||||||||||||| ||||    
T  40844874 aaatctcattactcaaggtgtttacaatgtttctc--aacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagt 40844971  T
Q  183 ttctct 188  Q
    ||||||    
T  40844972 ttctct 40844977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 10209036 - 10208933
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 320  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||| |||    
T  10209036 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatattta 10208939  T
Q  321 acgagc 326  Q
    ||||||    
T  10208938 acgagc 10208933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 23392106 - 23392204
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaat-ccaagtttctctctc 191  Q
    |||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| | ||| |||||||| | | |||||||||||||||    
T  23392106 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccctaaatttctctcctttgcagtcccaagtttctctctc 23392203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 21353765 - 21353898
Alignment:
Q  67 gatccttccaatggtgaaat-ctcactacccaaggtgattacaatgtttttcccaaccc--aagagaccctctctacaaagacactc--aaccctagagt 161  Q
    ||||||||||||||||| || |||||||||||| ||| |||| ||||||  ||||||||  |||||| |||| ||||||||||||||  ||||||| |||    
T  21353765 gatccttccaatggtgacattctcactacccaaagtgtttacgatgttt--cccaaccctcaagagaacctcactacaaagacactcaaaaccctaaagt 21353862  T
Q  162 tccctcctttgtaatcc-aagtttctctctctaagc 196  Q
    | ||||||||||| ||| | ||||||||||||||||    
T  21353863 tacctcctttgtattcctaggtttctctctctaagc 21353898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 18552768 - 18552721
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgttt 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  18552768 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 18552721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 30709672 - 30709557
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| |||||||| |||||||||||| ||||||||| |||||||||||  |||||||||| ||| | ||        |||||||||| ||| |||| |||    
T  30709672 gatcattccaatgatgaaatctcactccccaaggtgtttacaatgttt--cccaacccaaaagatcatc--------gacactcaactctaaagttacct 30709583  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    |||||||||||||||||||| |||||    
T  30709582 cctttgtaatccaagtttctgtctct 30709557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 10058247 - 10058182
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||    
T  10058247 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 10058182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 10060469 - 10060404
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||    
T  10060469 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 10060404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 10062691 - 10062626
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||    
T  10062691 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 10062626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 10064913 - 10064848
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||    
T  10064913 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 10064848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 275
Target Start/End: Original strand, 23198136 - 23198305
Alignment:
Q  95 ccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctcta 193  Q
    |||||||| |||||||||||  ||||||||||||||  ||||   ||||||| || |||||||||||| |  |||||| |  |||||||||||||||||     
T  23198136 ccaaggtgtttacaatgttt--cccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgattttccaagtttctctctct- 23198232  T
Q  194 agctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
          ||||| ||||| |||||||  |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  23198233 ------tccaa-ctctc-ttcaaaat-ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 23198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 7782454 - 7782508
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  7782454 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 7782508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 4598887 - 4598952
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  4598887 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 4598952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 4601108 - 4601173
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  4601108 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 4601173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 8477808 - 8477848
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  8477808 cccaaggtatgaccagtccttatcaaggatacttaacgagc 8477848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 10056025 - 10055960
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  10056025 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 10055960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 10067135 - 10067070
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  10067135 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 10067070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 10211198 - 10211133
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  10211198 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 10211133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 25637232 - 25637167
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  25637232 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 25637167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 8738716 - 8738677
Alignment:
Q  287 ccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  8738716 ccaaggtatgaccagtccttatcaaggatacttaacgagc 8738677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 9090954 - 9090915
Alignment:
Q  287 ccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  9090954 ccaaggtatgaccagtccttatcaaggatacttaacgagc 9090915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 10056083 - 10056028
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  10056083 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 10056028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 10058305 - 10058250
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  10058305 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 10058250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 10060527 - 10060472
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  10060527 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 10060472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 10062749 - 10062694
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  10062749 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 10062694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 10064971 - 10064916
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  10064971 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 10064916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 10067193 - 10067138
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  10067193 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 10067138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 3617311 - 3617257
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  3617311 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 3617257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 4598829 - 4598883
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  4598829 ctgcacaagaacacttaagtactagtcttcctctgtttcaatcgtgtcacgattt 4598883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 4601050 - 4601104
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  4601050 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 4601104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 10211256 - 10211202
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  10211256 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 10211202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 25637290 - 25637236
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  25637290 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 25637236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 40372446 - 40372410
Alignment:
Q  290 aggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||| |||||||||||||||||||||||||||    
T  40372446 aggtatgaccagtccttatcaaggatacttaacgagc 40372410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 10274603 - 10274646
Alignment:
Q  85 atctcactacccaaggtgattacaatgtttttcccaacccaaga 128  Q
    ||||||||||||||||||| || ||||| |||||||||||||||    
T  10274603 atctcactacccaaggtgaatataatgtgtttcccaacccaaga 10274646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 18656614 - 18656657
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  18656614 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 18656657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 23200445 - 23200504
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||| |||||||| ||||| ||||||| || ||||| |||||| ||||||||||||||||    
T  23200445 aaaatctgcacaaaaacacttaaataccagtcttccactgataaaatcgtgtcacgattt 23200504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 326
Target Start/End: Complemental strand, 27352299 - 27352235
Alignment:
Q  260 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||||||  | | |||||||||||||||| |||||||||||  |||| |||||||||    
T  27352299 aatcgtgtcacgatttg--cgtccgtcccaaggtatgaccagtccttatcagtgataattaacgagc 27352235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 800977 - 800910
Alignment:
Q  206 ctctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||| |  ||||||||||||| |||||| ||||| ||  |||||| ||||||||||||||||    
T  800977 ctctccttcaaata--tgcacaagaacacttaaatattagccctctactgataaaatcgtgtcacgattt 800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 23198309 - 23198375
Alignment:
Q  260 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||| | || |||||| ||||||| ||| ||||||||||  ||| |||||||||||    
T  23198309 aatcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcctggaaacttaacgagc 23198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 54634986 - 54634933
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| | | |||||||||||||||| | |||||||||||||||||    
T  54634986 ctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattt 54634933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 7782513 - 7782578
Alignment:
Q  261 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||| | || | |||||||||| | ||| ||||||||||| ||| |||||||||||    
T  7782513 atcgtgtcacgattggtacgttcgtcccaaggcacgaccagtccttatcatggaaacttaacgagc 7782578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 3617253 - 3617188
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| || | ||||||||||||||||||||||    
T  3617253 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagccgttatcaaggatacttaacgagc 3617188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 7167688 - 7167728
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  7167688 cccaaggtatgaccagtccttatcagtgatacttaacgagc 7167728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 22835199 - 22835275
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 172  Q
    |||||||||||||||||||  ||||||||| |||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  22835199 acccaaggtgattacaatg--tttcccaacacaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 22835275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 39153558 - 39153634
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 172  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  39153558 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 39153634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 180; Significance: 3e-97; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 5674700 - 5674452
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccca 125  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  5674700 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaaccca 5674601  T
Q  126 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgca 225  Q
    |||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |  ||| |||||    
T  5674600 agagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttatctctctaagctcttccaagctctcctcc--aaatctgca 5674503  T
Q  226 caagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  5674502 caagaacactttaaatactagccttcctctgatacaatcgtgtcacgattt 5674452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 22709173 - 22709420
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||    
T  22709173 aatatgaaccctaaaagagaagacacaagaggaagtttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgttt--cccaacccaa 22709270  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct--aagctcttccaaactctccttcaaaaaactgc 224  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||| | || |||| ||||    
T  22709271 gagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctcttcaaactcttccaaactctac-tccaaaatctgc 22709369  T
Q  225 acaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| |||||||||| ||||| || ||| ||||||||||||||||    
T  22709370 acaagaacacttaaatactagtcttccactaataaaatcgtgtcacgattt 22709420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 5757408 - 5757249
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| |   |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  5757408 atgaaccctaaa-gagaagacacggaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 5757312  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||   |||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  5757311 atcctaaatacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 5757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 31936778 - 31936903
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||| |||| ||||||||||||||||||||| |||| |||    
T  31936778 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaatagatcctcactacaaagacactcaaccctaaagttacct 31936875  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    |||||| |||||||||||||||||||||    
T  31936876 cctttgcaatccaagtttctctctctaa 31936903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 56 - 194
Target Start/End: Original strand, 31979704 - 31979840
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||| ||| |||| |||||||||||||||||||    
T  31979704 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttctcaacccaaaagaacctcactacaaagacactcaaccc 31979801  T
Q  156 tagagttccctcctttgtaatccaagtttctctctctaa 194  Q
    || |||| ||||||||| | |||||||||||||||||||    
T  31979802 taaagttacctcctttgcagtccaagtttctctctctaa 31979840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 56 - 194
Target Start/End: Complemental strand, 5572148 - 5572012
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||||  |||||||||||||| || | |||||||||||| ||||||    
T  5572148 aggaagcttttgatcattccaatagtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatccccactacaaagacacccaaccc 5572051  T
Q  156 tagagttccctcctttgtaatccaagtttctctctctaa 194  Q
    || |||| ||||| |||||||||||||||||||||||||    
T  5572050 taaagttacctccattgtaatccaagtttctctctctaa 5572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 31086377 - 31086245
Alignment:
Q  58 gaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaacccta 157  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||  |||| |||||| |||| |||||||||||||||||||||    
T  31086377 gaagcttttgatccttccaatggtgaaatctcacaacccaaggtgtttacaatgtttctc--aacctaagagatcctcactacaaagacactcaacccta 31086280  T
Q  158 gagttccctcctttgtaatccaagtttctctctct 192  Q
     |||| || ||||||||||||||||||||||||||    
T  31086279 aagttaccccctttgtaatccaagtttctctctct 31086245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 5017390 - 5017271
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||  ||    
T  5017390 gatccttccaatggtgaaatctcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttatct 5017293  T
Q  167 cctttgtaatccaagtttctct 188  Q
    | ||||||||||||||||||||    
T  5017292 cgtttgtaatccaagtttctct 5017271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 24435865 - 24435743
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||||||| |||| | ||||||||||||||||||| ||||  ||    
T  24435865 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaactcaagagaacctcac-acaaagacactcaaccctaaagttatct 24435769  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    |||||||||||| |||||||||||||    
T  24435768 cctttgtaatcctagtttctctctct 24435743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 190
Target Start/End: Original strand, 22963902 - 22964023
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||| |||||||| | || ||||||||||||||||||||| ||||  ||    
T  22963902 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagct 22963999  T
Q  167 cctttgtaatccaagtttctctct 190  Q
    | ||||||||| ||||||||||||    
T  22964000 cttttgtaatcaaagtttctctct 22964023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 190
Target Start/End: Complemental strand, 23824491 - 23824370
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||| |||||||| | || ||||||||||||||||||||| ||||  ||    
T  23824491 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagct 23824394  T
Q  167 cctttgtaatccaagtttctctct 190  Q
    | ||||||||| ||||||||||||    
T  23824393 cttttgtaatcaaagtttctctct 23824370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 11857154 - 11857258
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  11857154 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 11857252  T
Q  193 aagctc 198  Q
    ||||||    
T  11857253 aagctc 11857258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 14737482 - 14737378
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||| ||||||| |||||||||     
T  14737482 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaag-ttctctctca 14737384  T
Q  193 aagctc 198  Q
    ||||||    
T  14737383 aagctc 14737378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 22010602 - 22010498
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  22010602 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 22010504  T
Q  193 aagctc 198  Q
    ||||||    
T  22010503 aagctc 22010498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 21801238 - 21801108
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  21801238 gatccttccaatgttgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 21801141  T
Q  165 ctcctttgtaatc-caagtttctctctctaagc 196  Q
    || ||||||| || |||||||||||||| ||||    
T  21801140 ctgctttgtattctcaagtttctctctcaaagc 21801108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 14742342 - 14742238
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    |||||||||||||| ||||||| |||||||||     
T  14742342 acccaaagtgattacaatgtttttcccaacccaagagacactctcaacaaagacacttaacccattggttccctcctttgttatccaag-ttctctctca 14742244  T
Q  193 aagctc 198  Q
    ||||||    
T  14742243 aagctc 14742238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 21356204 - 21356318
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| || ||||| | | |||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||  ||||| ||||||||||    
T  21356204 atgaaccctaaa-gaaaagacacaaaaggaagcttttgattcttccaatgatgaaatctcactacccaaggtgtttacaatg--tttcctaacccaagag 21356300  T
Q  130 accctctctacaaagaca 147  Q
    | |||| |||||||||||    
T  21356301 atcctcactacaaagaca 21356318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 2171844 - 2171949
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 320  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| | || |||||| ||||||| |||  |||||||||  ||| |||||    
T  2171844 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcttggaaactta 2171943  T
Q  321 acgagc 326  Q
    ||||||    
T  2171944 acgagc 2171949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 6097747 - 6097852
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 320  Q
    |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||| |  | |||||||| ||||| ||| ||||||||||| ||| |||||    
T  6097747 ctgcacaagaacacttaaatactagtcttcccctgataaaatcgtgtcacgattggtgcgtacgtccccaggtacgaccagtccttatcatggaaactta 6097846  T
Q  321 acgagc 326  Q
    ||||||    
T  6097847 acgagc 6097852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 18234334 - 18234409
Alignment:
Q  117 cccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    |||||||||||||| |||| ||||||||||||||||||||| || | ||||||||||||||||||||||| |||||    
T  18234334 cccaacccaagagatcctcactacaaagacactcaaccctaaagctacctcctttgtaatccaagtttctttctct 18234409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 18233038 - 18233096
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttt 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  18233038 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt 18233096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 10077027 - 10076962
Alignment:
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    |||| |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  10077027 gagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 10076962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 21272838 - 21272763
Alignment:
Q  114 tttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    |||| |||||||||||| |||| ||||||||||||||||||||| |||| || ||||||||||| |||||||||||    
T  21272838 tttcgcaacccaagagaacctcactacaaagacactcaaccctaaagttaccccctttgtaatcaaagtttctctc 21272763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 196
Target Start/End: Original strand, 14521877 - 14522007
Alignment:
Q  68 atccttccaatggtgaaat-ctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||  ||||||||||  ||||||| |||  ||||||||||| | ||||||| |||| |    
T  14521877 atccttccaatggtgaaattctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctaactacaaagacattaaaccctaaagttac 14521974  T
Q  165 ctcctttgtaatcc-aagtttctctctctaagc 196  Q
    ||| |||||| ||| | ||||||||||| ||||    
T  14521975 ctcatttgtattcctaggtttctctctcaaagc 14522007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 5266418 - 5266518
Alignment:
Q  225 acaagaacacataa-atactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacg 323  Q
    ||||||||||| || ||||||| ||||||||||  ||||||||||||||||||  | | |||  ||||||||||| |||||||||||||||||||||| |    
T  5266418 acaagaacacaaaatatactagtcttcctctgaagcaatcgtgtcacgatttg--cgtccgtttcaaggtatgaccagtccttatcaaggatacttaatg 5266515  T
Q  324 agc 326  Q
    |||    
T  5266516 agc 5266518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 31076830 - 31076706
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| ||||||||||||||||||| |||| |||||| |||||| |  |||| |||||||||  | | || ||||||||||||||||||||| ||||  ||    
T  31076830 gatcattccaatggtgaaatctcaatacctaaggtgtttacaaag--tttctcaacccaaggcaacgtcactacaaagacactcaaccctatagttatct 31076733  T
Q  167 cctttgtaat-ccaagtttctctctct 192  Q
    |||||||| | |||||||||| |||||    
T  31076732 cctttgtattcccaagtttctttctct 31076706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 4630145 - 4630203
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgttt 114  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||    
T  4630145 aggaagcttttgatccttccaatggtgaaatctcactacccaatgtgtttaaaatgttt 4630203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 34166886 - 34166821
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||    
T  34166886 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 34166821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 3073064 - 3073118
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  3073064 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 3073118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 23896628 - 23896678
Alignment:
Q  142 aagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    |||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  23896628 aagacactcaactctaaagttacctcctttgtaatccaagtttctctctct 23896678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 5674429 - 5674384
Alignment:
Q  281 tacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  5674429 tacgtcccaaggtatgaccagtccttatcacggatacttaacgagc 5674384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 13151069 - 13151004
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  13151069 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 13151004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 33342468 - 33342533
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  33342468 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 33342533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 34164664 - 34164599
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  34164664 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 34164599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 33342410 - 33342465
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  33342410 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 33342465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 34164722 - 34164667
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  34164722 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 34164667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 34166944 - 34166889
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  34166944 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 34166889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 411903 - 411841
Alignment:
Q  264 gtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||| |  ||| |||||||||||||||| ||||||||||| ||| |||||||||||    
T  411903 gtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagc 411841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 411965 - 411911
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||    
T  411965 ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt 411911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 6027111 - 6027057
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  6027111 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 6027057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 25421168 - 25421114
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  25421168 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 25421114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 6027053 - 6026988
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | |||  ||||||||||||||||||||||||||    
T  6027053 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagc 6026988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 6136328 - 6136393
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||| |||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  6136328 caattgtgtcacgatttg--cttccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 6136393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 10077062 - 10077026
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtga 103  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10077062 gatccttccaatggtcaaatctcactacccaaggtga 10077026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 25421016 - 25420951
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||| ||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  25421016 caatcatgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 25420951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 25421110 - 25421045
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||| ||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  25421110 caatcatgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 25421045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 6438680 - 6438723
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  6438680 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 6438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 28155475 - 28155432
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  28155475 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 28155432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 28184684 - 28184749
Alignment:
Q  93 acccaaggtgattacaatgttttt---cccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    ||||||||||||||| ||||||||   || |||||||||||| ||||| |||||||| ||||||||    
T  28184684 acccaaggtgattactatgtttttttcccaaacccaagagacactctcaacaaagaccctcaaccc 28184749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 5385799 - 5385881
Alignment:
Q  68 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaac 153  Q
    ||||||| |||||||||||||||||||  ||||||||| |||||||| |   |||||||  || |||| |||||||||||||||||    
T  5385799 atccttctaatggtgaaatctcactacttaaggtgattgcaatgtttctt--aacccaat-gaacctcactacaaagacactcaac 5385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 6136271 - 6136324
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||| || |||||||||| ||||||||| | |||||||||||||||||    
T  6136271 ctgcacaagaa-acttaaatactagtcttcctctgttccaatcgtgtcacgattt 6136324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 326
Target Start/End: Original strand, 3073147 - 3073188
Alignment:
Q  285 tcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||| ||||||||||| ||| |||||||||||    
T  3073147 tcccaaggtatgaccagtccttatcatggaaacttaacgagc 3073188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 28468470 - 28468220
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  28468470 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaa 28468371  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||    
T  28468370 gagatcctcactacaaagacacttaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcc-tccaaaatctgcac 28468272  T
Q  227 aagaacacataaa---tactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| ||||   |||||| ||||| |||||| ||||||||||||||||    
T  28468271 aagaacacttaaatactactagtcttccactgataaaatcgtgtcacgattt 28468220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 24742106 - 24742355
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  24742106 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 24742205  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||  | ||| ||||    
T  24742206 aagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcct--acaaatctgc 24742303  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||   ||||||||||||||||    
T  24742304 acaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt 24742355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 29 - 326
Target Start/End: Original strand, 29760810 - 29761104
Alignment:
Q  29 tatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttt-tcccaaccca 125  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||| ||||||||||    
T  29760810 tatgaaccctaa--gagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaaccca 29760907  T
Q  126 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgca 225  Q
    |||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||| |||||||| |||||   |  ||| |||||    
T  29760908 agagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctcactctaagttcttccaagctctc---cccaaatctgca 29761004  T
Q  226 caagaacac-ataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacga 324  Q
    ||||||||| ||| ||||||| ||||||||||   ||||||| |||||||||  | | ||| |||||||||||| |||||||||||||||||||||||||    
T  29761005 caagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttg--cgtccgtaccaaggtatgaccagtccttatcaaggatacttaacga 29761102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 31985563 - 31985404
Alignment:
Q  31 tgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagaga 130  Q
    |||||||||||||||||||| | | |||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||  ||||||||||||||    
T  31985563 tgaaccctaaaagagaagacacaaaaggaagcttttgatccttcccatggtgaaatttcactacccaaggtgtttacaatgttt--cccaacccaagaga 31985466  T
Q  131 ccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
     ||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31985465 tcctcaatacaaaaacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 31985404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 16623198 - 16623064
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  16623198 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 16623101  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    || |||| |||||||||||||||||||||||||||||    
T  16623100 taaagttacctcctttgtaatccaagtttctctctct 16623064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 5396601 - 5396442
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| | | || ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  5396601 atgaaccctaaa-gagaagacacaaaagaaagcttttgattcttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 5396505  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  5396504 atcctcactacaaagacactcaaccctaaagtaacctcctttgtaatccaagtttctctctct 5396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 16628777 - 16628643
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  16628777 aggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 16628680  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    || |||| ||||||||| ||||||| |||||||||||    
T  16628679 taaagttacctcctttgcaatccaattttctctctct 16628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 3777752 - 3777875
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  3777752 gatcattccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 3777849  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  3777850 cctttgtaatccaagtttctctctct 3777875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 5269094 - 5268971
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  5269094 gatccttccaatggtgaaatctcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 5268997  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  5268996 cctttgtaatccaagtttctctctct 5268971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 10047584 - 10047707
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||  |||||||||||||||||||| |||| |||    
T  10047584 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcattacaaagacactcaaccctaaagttacct 10047681  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  10047682 cctttgtaatccaagtttctctctct 10047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 36315135 - 36315001
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||  |||||||||||||| |||||||||||||||||| |||||    
T  36315135 aggaagcttttgatccttccaatggttaaatctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactaaaccc 36315038  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    || |||| ||||||||||||||||||||| |||||||    
T  36315037 taaagttacctcctttgtaatccaagtttatctctct 36315001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 36329344 - 36329210
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||  |||||||||||||| |||||||||||||||||| |||||    
T  36329344 aggaagcttttgatccttccaatggttaaatctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactaaaccc 36329247  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    || |||| ||||||||||||||||||||| |||||||    
T  36329246 taaagttacctcctttgtaatccaagtttatctctct 36329210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 25861927 - 25861802
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  25861927 gatccttccaatggtgaaatctcactactcaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 25861830  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
     |||||||||||||||||||||||||||    
T  25861829 tctttgtaatccaagtttctctctctaa 25861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 6743320 - 6743186
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||| ||    
T  6743320 aggaagtttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcgctacaaagacactcaaacc 6743223  T
Q  156 tagagttccctcctttgtaatccaagtttctctctct 192  Q
    |  |||| |||||||||||||||||||||||||||||    
T  6743222 tcaagttacctcctttgtaatccaagtttctctctct 6743186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 8689416 - 8689270
Alignment:
Q  41 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 140  Q
    |||||||||| | | ||||| |||| ||||||||||||||||||||||||||| |||||||| ||| |||||||  |||||||||||||| |||| ||||    
T  8689416 aagagaagacacaaaaggaaacttttgatccttccaatggtgaaatctcactatccaaggtgtttaaaatgttt--cccaacccaagagatcctcactac 8689319  T
Q  141 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  8689318 aaagacactaaaccctaaagttacctcctttgtaatccaagtttctctc 8689270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 5143422 - 5143582
Alignment:
Q  25 agaatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    ||||||||||||||||| ||||| || | | |||||||||  ||||||||||||||||||||||||||||| |||||| |||||| ||||  ||||| ||    
T  5143422 agaatatgaaccctaaa-gagaaaacacaaaaggaagcttatgatccttccaatggtgaaatctcactacctaaggtgtttacaaagttt--cccaatcc 5143518  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctct 188  Q
    |||||| |||| ||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  5143519 aagagatcctcactacaaagacactcaaccctaaagttacctcctctgtaatccaagtttctct 5143582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 5112440 - 5112564
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||| | |||||||||||||| |||| | || |||    
T  5112440 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagaacctcacaacaaagacactcaaacctaaaattacct 5112537  T
Q  167 cctttgtaatc-caagtttctctctct 192  Q
    ||||||||||| |||||||||||||||    
T  5112538 cctttgtaatctcaagtttctctctct 5112564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 42599467 - 42599344
Alignment:
Q  68 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctc 167  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||  |||||||||| |||||| |||| |||||||||||||||| |||| |||| ||||    
T  42599467 atccttccaatggtgaaatctcactacccaaggtgtttagaatg--tttcccaaccgaagagaacctcactacaaagacactcaa-cctaaagttacctc 42599371  T
Q  168 ctttgtaatccaagtttctctctctaa 194  Q
    |||||||||||||||||||||| ||||    
T  42599370 ctttgtaatccaagtttctctcactaa 42599344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 189
Target Start/End: Original strand, 5147842 - 5148001
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    ||||||||||||||| ||||| || | | |||||||||  |||||||||||||||||||||||| || |||| ||| |||||||||||  |||||| |||    
T  5147842 aatatgaaccctaaa-gagaaaacacaaaaggaagcttatgatccttccaatggtgaaatctcattatccaatgtgtttacaatgttt--cccaactcaa 5147938  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    |||| |||  ||||||||||||| ||||||| |||| |||||| |||||||||||||||||||    
T  5147939 gagatccttactacaaagacactaaaccctaaagttacctcctgtgtaatccaagtttctctc 5148001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 192
Target Start/End: Complemental strand, 38152342 - 38152208
Alignment:
Q  57 ggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccct 156  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| ||||||| |||  |||| ||||||||| |||| ||||||||||||||||||||    
T  38152342 ggaagcttttgatccttccaatggtgaattgtcactacccaaggtgtttacaatattt--cccatcccaagagatcctcactacaaagacactcaaccct 38152245  T
Q  157 agagttccctcctttgtaatcc-aagtttctctctct 192  Q
    | |||| |||| |||||||||| || |||||||||||    
T  38152244 aaagttacctcatttgtaatccaaattttctctctct 38152208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 24334014 - 24334144
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| |||||||||| |||||||||| |||| |    
T  24334014 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagactctcaaccctaaagttac 24334111  T
Q  165 ctcctttgtaat-ccaagtttctctctctaagc 196  Q
    || ||||||| | ||||||||||||||| ||||    
T  24334112 cttctttgtattcccaagtttctctctcaaagc 24334144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 54867385 - 54867505
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||  ||| ||||||  |     |||||||||||||  ||| ||||||||||||||||||||| |||| |||    
T  54867385 gatccttccaatggtgaaatctcactacccatagtgtttacaactt-----ccaacccaagagattctcactacaaagacactcaaccctaaagttacct 54867479  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  54867480 cctttgtaatccaagtttctctctct 54867505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 51520637 - 51520741
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    ||||||||||||   ||||||| ||||||||||    
T  51520637 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttttctatccaag-ttctctctct 51520735  T
Q  193 aagctc 198  Q
    ||||||    
T  51520736 aagctc 51520741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 3793974 - 3793843
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||  ||||||  ||||||| |||| ||| ||||||||||||||||| |||| |    
T  3793974 gatcctttctatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaaccctcaagagaacctcactataaagacactcaaccctaaagttac 3793877  T
Q  165 ctcctttgtaat-ccaagtttctctctctaagct 197  Q
    ||||||| || | ||||||||||||||| |||||    
T  3793876 ctcctttatattcccaagtttctctctcaaagct 3793843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 9224312 - 9224208
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  9224312 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 9224214  T
Q  193 aagctc 198  Q
    ||||||    
T  9224213 aagctc 9224208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 9229099 - 9228995
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  9229099 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 9229001  T
Q  193 aagctc 198  Q
    ||||||    
T  9229000 aagctc 9228995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 39774199 - 39774075
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||  ||||||||| ||||||| ||||  |||||| |  |||||||||| |||| |||    
T  39774199 gatcattccaatggtgaaaactcactacccaaggtgtttacaatg--tttcccaactcaagagaacctcgttacaaataatctcaaccctaaagttacct 39774102  T
Q  167 cctttgt-aatccaagtttctctctct 192  Q
    ||||||| || ||||||||||||||||    
T  39774101 cctttgtaaacccaagtttctctctct 39774075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 18712671 - 18712581
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtt 183  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  |||||||||    
T  18712671 acccaaggtgataacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 18712581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 6542378 - 6542480
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctctc 191  Q
    |||||||||| |||||||||||  |||||||||||||| ||||  |||||||||||||||||||| |||| ||||||||||| ||| | |||||||||||    
T  6542378 acccaaggtgtttacaatgttt--cccaacccaagagaacctcattacaaagacactcaaccctaaagttacctcctttgtattcctaggtttctctctc 6542475  T
Q  192 taagc 196  Q
     ||||    
T  6542476 aaagc 6542480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 51337035 - 51336933
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctctc 191  Q
    |||||||||| ||||||||||||  ||||||||||||| |||| ||||||||||| ||||||||| |||| | ||||||||| ||| |||||||||||||    
T  51337035 acccaaggtgtttacaatgtttt--ccaacccaagagaacctcactacaaagacattcaaccctaaagttacttcctttgtattcctaagtttctctctc 51336938  T
Q  192 taagc 196  Q
     ||||    
T  51336937 aaagc 51336933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 18377562 - 18377679
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||| |||||||| ||||||||| | ||||||||||||  ||| ||||||||| |||| ||||||| ||||||||      ||||  ||    
T  18377562 gatccttccaatggtaaaatctcattacccaaggggtttacaatgtttt--ccatcccaagagaacctcactacaaatacactcaa------agttaact 18377653  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    |||||||||||||||||||| |||||    
T  18377654 cctttgtaatccaagtttctttctct 18377679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 1983194 - 1983070
Alignment:
Q  68 atccttccaatggtgaaa-tctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||| ||| |||| ||| |||| ||||||||||   | |||||||||| | |||| ||||||||||||||||||||| |||| |||    
T  1983194 atccttccaatggtgaaaatcttactaaccagggtgtttacaatgtta--cacaacccaagataacctcactacaaagacactcaaccctaaagttacct 1983097  T
Q  167 cctttgt-aatccaagtttctctctct 192  Q
     |||||| || |||||| |||||||||    
T  1983096 tctttgtaaacccaagtctctctctct 1983070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 275
Target Start/End: Original strand, 3814202 - 3814383
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaag-tttctctct 190  Q
    ||||||||||||||||||||||||||||||| |||| || |||||  ||||||||| || ||| ||| | |||||||||||   |||||| |||||||||    
T  3814202 acccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaagacacacaccccatag-gatccctcctttgatgtccaagttttctctct 3814300  T
Q  191 ctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
     |||||||| | ||  |   ||||||||||  |||||||||||| ||| ||||||| ||||| ||||   ||||||||||||||||    
T  3814301 -taagctctcctaaggttgtcttcaaaaaa--gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgtcacgattt 3814383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 13992600 - 13992654
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  13992600 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 13992654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 7122486 - 7122421
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  7122486 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 7122421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 31495608 - 31495677
Alignment:
Q  204 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||||||||||   |||||||||||||| |||||| ||||| ||| |||||| ||||||||||||||||    
T  31495608 aactctccttcaaat--ctgcacaagaacacttaaatattagccctccactgataaaatcgtgtcacgattt 31495677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 5135927 - 5135872
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  5135927 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 5135872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 5138153 - 5138098
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 276  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  5138153 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 5138098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 37782070 - 37782170
Alignment:
Q  71 cttccaatggtgaaatctcactacccaaggtgattac-aatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcct 169  Q
    ||||||||  |||||||||||||||||||||| |||| ||||||||  ||||||||||||| ||||||  |||||| | ||||| ||| |||| |||| |    
T  37782070 cttccaataatgaaatctcactacccaaggtgtttacaaatgtttt--ccaacccaagagagcctctcaccaaagatattcaactctaaagttacctcat 37782167  T
Q  170 ttg 172  Q
    |||    
T  37782168 ttg 37782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 45347721 - 45347678
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  45347721 cccaaggtgattacaatgtttttcccaacctaagagacactctc 45347678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 6677420 - 6677362
Alignment:
Q  114 tttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 172  Q
    ||||||||||||||||| || ||  ||||||||||||||||||| |||| |||||||||    
T  6677420 tttcccaacccaagagaacccctgaacaaagacactcaaccctaaagttacctcctttg 6677362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 7122544 - 7122490
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  7122544 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 7122490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 5135869 - 5135804
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | |||  ||||||||||||||||||||||||||    
T  5135869 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagc 5135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 5138095 - 5138030
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | |||  ||||||||||||||||||||||||||    
T  5138095 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagc 5138030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 24742387 - 24742423
Alignment:
Q  290 aggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||| |||||||||||||||||||||||||||    
T  24742387 aggtatgaccagtccttatcaaggatacttaacgagc 24742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 28468196 - 28468132
Alignment:
Q  262 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||| || |||||| ||||||| ||| |||||||||||  || |||||||||||    
T  28468196 tcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatagaaacttaacgagc 28468132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 5732844 - 5732887
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  5732844 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 5732887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 18855906 - 18855949
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  18855906 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 18855949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 45357201 - 45357158
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  45357201 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 45357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 31985385 - 31985331
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||||| ||||  |||||| ||||||| ||||||||    
T  31985385 ctgcacaagaacacttaaatactagtcttcaactgataaaatcgtgccacgattt 31985331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 4587929 - 4587823
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctac-aaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctct 190  Q
    |||||||||| |||||||||||  ||||||||| |||| |||| |||| ||||||||| ||||||| ||||  ||| |||||| ||| | ||||||||||    
T  4587929 acccaaggtgtttacaatgttt--cccaacccatgagaacctcactacaaaagacacttaaccctaaagttatctcatttgtattcctaggtttctctct 4587832  T
Q  191 ctaagctct 199  Q
      |||||||    
T  4587831 tgaagctct 4587823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 13992659 - 13992724
Alignment:
Q  261 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||   || |||||| ||||||||||| ||||||||||| | | |||||||||||    
T  13992659 atcgtgtcacgattgatacgtacgtcacaaggtatgaccagtccttatcatgaaaacttaacgagc 13992724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 48143013 - 48142916
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 191  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  48143013 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 48142917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 48893839 - 48893920
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaaccc--aagagaccctctctacaaagacactcaaccctagagttccctcctttgta 174  Q
    |||||||||| |||||||||||  || |||||  |||||| |||| ||||||||||||||||||||  | || |||||||||||    
T  48893839 acccaaggtgtttacaatgttt--ccaaaccctaaagagaacctcactacaaagacactcaaccctcaaattacctcctttgta 48893920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 52082854 - 52082951
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 191  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  52082854 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 52082950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 9296332 - 9296084
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccca 125  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  9296332 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaatggtgaactcctcactacccaaggtgattacaatgtttttcccaaccca 9296233  T
Q  126 agagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgca 225  Q
    | |||| || |||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||  |||    
T  9296232 atagacactttctacaaagacactcaaccctttggttccctcctttgtaatccaagtttttctctctaagctcttccaagctctcctccaaaaaa--gca 9296135  T
Q  226 caagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||  |||||||||| ||||||||||  |||||||||||||||||    
T  9296134 caagaacactttaaatactagtcttcctctgaagcaatcgtgtcacgattt 9296084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 14291654 - 14291903
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||| || |||||||||||||||||||||||||||||||||||||    
T  14291654 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaaccc 14291753  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| || ||||||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||  || |||| ||||    
T  14291754 aagagacactatctacaaagacgctcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc--tctaaaatctgc 14291851  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| ||||||| ||||||||||   ||||||| ||||||||    
T  14291852 acaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgattt 14291903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 75 - 275
Target Start/End: Original strand, 25409842 - 25410041
Alignment:
Q  75 caatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgta 174  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  25409842 caatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagtgttccctcctctgta 25409941  T
Q  175 atccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatt 274  Q
    |||||||||||||||||||||||||||||| |||| |||| |||| |||||||||||||| ||||||  | ||||||||||||| ||| |||||||||||    
T  25409942 atccaagtttctctctctaagctcttccaagctctacttc-aaaatctgcacaagaacacttaaatatcatccttcctctgataaaattgtgtcacgatt 25410040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 3491915 - 3492152
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  3491915 aatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaatggtggaatctcactacccaaggtgtttacaatgttttttccaacccaa 3492014  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |           || |||| ||||||    
T  3492015 gagatcctcactacaaagacactcaaccctagatttccctcctttgtaatccaagtttctctctctaagctttac-----------tccaaaatctgcac 3492103  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| |||||||||| ||||| |||||| ||| ||||||||||||    
T  3492104 aagaacacttaaatactagtcttccactgataaaattgtgtcacgattt 3492152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 27 - 275
Target Start/End: Complemental strand, 11098858 - 11098609
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa-tggtgaaatc-tcactacccaaggtgattacaatgtttttcccaaccc 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  || | || |||||||||||||||||||||||||||||||||||||    
T  11098858 aatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgtactcctcactacccaaggtgattacaatgtttttcccaaccc 11098759  T
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgc 224  Q
    ||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||| ||  | ||| ||||    
T  11098758 aagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctcttct--acaaatctgc 11098661  T
Q  225 acaagaacac-ataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||| ||| || |||| ||||||||||   ||||||| ||||||||    
T  11098660 acaagaacacaatatatgctagtcttcctctgaagaaatcgtgccacgattt 11098609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 275
Target Start/End: Original strand, 40738997 - 40739232
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaa 126  Q
    |||||||||||||||||||||||| | | || ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  40738997 aatatgaaccctaaaagagaagacacaatagtaagcttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgttt--cccaacccaa 40739094  T
Q  127 gagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcac 226  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||     |||||| || |||||||||||||    
T  40739095 gagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctct------tc-----aactctactccaaaaaactgcac 40739183  T
Q  227 aagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||| ||||||| || ||||  |||||| ||||||||||||||||    
T  40739184 aagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt 40739232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 36757692 - 36757536
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  36757692 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 36757596  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    | |||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  36757595 atcctcactacaaagacactcaaccctaaagttacctcctttgtaattcaagtttctctc 36757536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 40 - 192
Target Start/End: Complemental strand, 28259098 - 28258948
Alignment:
Q  40 aaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 139  Q
    ||||||||||| | | |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||| |||    
T  28259098 aaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaagatgtttacaatgttt--cccaacccaagagatcctcacta 28259001  T
Q  140 caaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
     ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  28259000 taaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 28258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 33528518 - 33528395
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  33528518 gatccttccaatggtgaaatctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 33528421  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||||||    
T  33528420 cctttgtaatccaagtttctctctct 33528395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 14698903 - 14698778
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||| |||| ||||||||||||||||||||| |||| |||    
T  14698903 gatccttccaatagtgaaatctcactacccaaggtgtttacaatgttt--cccaacccgagagatcctcactacaaagacactcaaccctaaagttacct 14698806  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||||||    
T  14698805 cctttgtaatccaagtttctctctctaa 14698778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 33118338 - 33118463
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||   |||||||||||||| |||| ||||||||||||||||||||| |||| |||    
T  33118338 gatccttccaatggcgaaatctcactacccaaggtgtttacaatgttc--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacct 33118435  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||||||||||||||||||||    
T  33118436 cctttgtaatccaagtttctctctctaa 33118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 21630148 - 21630268
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||||||||| ||| |||| |||    
T  21630148 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacactaaagttacct 21630245  T
Q  167 cctttgtaatccaagtttctctc 189  Q
    |||||||||||||||||||||||    
T  21630246 cctttgtaatccaagtttctctc 21630268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 34389054 - 34389174
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||| |||||||| |||| |||    
T  34389054 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacacacaaccctaaagttacct 34389151  T
Q  167 cctttgtaatccaagtttctctc 189  Q
    |||||||||||||||||||||||    
T  34389152 cctttgtaatccaagtttctctc 34389174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 10445361 - 10445236
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||| |||| ||||||||||| ||||||||| |||| |||    
T  10445361 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccgagagaacctcactacaaagacattcaaccctaaagttacct 10445264  T
Q  167 cctttgtaatccaagtttctctctctaa 194  Q
    ||||||||||| ||||||||||||||||    
T  10445263 cctttgtaatctaagtttctctctctaa 10445236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 23078391 - 23078245
Alignment:
Q  41 aagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctac 140  Q
    |||||||||| | | |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||  |||   ||    
T  23078391 aagagaagacacaaaaggaagcttttgatccttccaatgatgaaatctcactacccaaggtgtttacaatg--tttcccaacccaagagattctcatcac 23078294  T
Q  141 aaagacactcaaccctagagttccctcctttgtaatccaagtttctctc 189  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  23078293 aaagacactcaacccaaaagttacctcctttgtaatccaagtttctctc 23078245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 13569532 - 13569655
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||  |||||||||||||| |||| ||||||||||||| ||||||| ||||  ||    
T  13569532 gatccttccaatggtgaaatctcactatccaaggtgtttataatgttt--cccaacccaagagatcctcactacaaagacacttaaccctaaagttatct 13569629  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    | ||||||||||||||||||||||||    
T  13569630 catttgtaatccaagtttctctctct 13569655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 20522425 - 20522548
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||| ||| |||||||||||||||||||||||| || |||||||| ||  ||||||||||||||  ||| ||||||||||||||||||||| |||| |||    
T  20522425 gatcattcaaatggtgaaatctcactacccaagttgtttacaatgctt--cccaacccaagagatactcactacaaagacactcaaccctaaagttacct 20522522  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||| ||||||||||||||    
T  20522523 cctttgtaatctaagtttctctctct 20522548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 192
Target Start/End: Complemental strand, 8390070 - 8389920
Alignment:
Q  41 aagagaagacgctagaggaagcttta-gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 139  Q
    ||||||| || | ||||||||||||  ||| ||||||||||| ||||||||||| |||||||| |||||||||||  || ||||||||||| | || |||    
T  8390070 aagagaaaacacaagaggaagctttttgattcttccaatggtaaaatctcactatccaaggtgtttacaatgttt--cctaacccaagagatcatcacta 8389973  T
Q  140 caaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||| |||||||||| ||||  ||||||||||||||||||||||||||||    
T  8389972 caaagaccctcaaccctaaagttatctcctttgtaatccaagtttctctctct 8389920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 183
Target Start/End: Original strand, 17865408 - 17865522
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||| | | ||||||||||||||||||||||| |||||||||||  |||||||||||||| | || ||||||||||||||||||||| |||| |||    
T  17865408 gatccttctatttgtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagagatcttcactacaaagacactcaaccctaaagttacct 17865505  T
Q  167 cctttgtaatccaagtt 183  Q
    |||||||||||||||||    
T  17865506 cctttgtaatccaagtt 17865522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 8040267 - 8040397
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| | || |||||||||||||||||| || |||| |    
T  8040267 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacttcactacaaagacactcaaccataaagttac 8040364  T
Q  165 ctcctttgtaat-ccaagtttctctctctaagc 196  Q
    |||||||||| | ||||||||||||||| ||||    
T  8040365 ctcctttgtattaccaagtttctctctcaaagc 8040397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 10707146 - 10707023
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||||| ||  ||||||||||| |||| ||||||||| | | ||||||| |||| |||    
T  10707146 gatccttctaatggtgaaatctaactacccaaggtgtttacaatgtttctc--aacccaagagatcctcactacaaagataataaaccctaaagttacct 10707049  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    ||||||||||| ||||||||||||||    
T  10707048 cctttgtaatctaagtttctctctct 10707023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 31056246 - 31056376
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| ||||||||||||||||||||  |||| |    
T  31056246 gatcctttcaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 31056343  T
Q  165 ctcctttgtaat-ccaagtttctctctctaagc 196  Q
    |||||||||| | ||||||||||||||| ||||    
T  31056344 ctcctttgtattcccaagtttctctctcaaagc 31056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 35397712 - 35397839
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||  ||| |||| ||||||||||| ||||||||| |||  |||    
T  35397712 gatccttccaatggtgaaatctcactacccaaggtaattacaatgtttt--ccaacccagaagaacctcactacaaagacaatcaaccctaaagtgacct 35397809  T
Q  167 cctttgta--atccaagtttctctctctaa 194  Q
    ||||||||   | |||||||||||||||||    
T  35397810 cctttgtatttttcaagtttctctctctaa 35397839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 34682227 - 34682097
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |    | ||||||| |||| ||||||||||||||||||||| |||| |||    
T  34682227 gatccttcaagtggtgaaatctcactacccaaggtgtttacaatgttttccaactctcaagagaacctcactacaaagacactcaaccctaaagttacct 34682128  T
Q  167 cctttgtaat-ccaagtttctctctctaagc 196  Q
    |||||||| | ||||||||||||||| ||||    
T  34682127 cctttgtattcccaagtttctctctcaaagc 34682097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 40015128 - 40015251
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||  ||||||||||||||||| ||||  |||||| ||||||||||||| |||| |||    
T  40015128 gatccttccaatggtgaaatctcactatccaatgtgtttacaatg--tttcccaacccaagagaacctcaatacaaa-acactcaaccctaaagttacct 40015224  T
Q  167 cctttgtaatcc-aagtttctctctct 192  Q
    ||||||||| || || |||||||||||    
T  40015225 cctttgtaaacctaaatttctctctct 40015251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 39483136 - 39483229
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagtt 162  Q
    |||| ||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||||| |||| | ||||||||||||||||||| ||||    
T  39483136 gatcattccaatggtgaaatctcactacccaaggtgtttacaa--tatttcccaacccaagagatcctcacaacaaagacactcaaccctaaagtt 39483229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 2837923 - 2837816
Alignment:
Q  68 atccttccaatggtgaaat-ctcactacccaaggtgattacaatgtttttcccaaccc--aagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||  ||||||||  |||||| |||| ||||||||||||||||||||| |||| |    
T  2837923 atccttccaatggtgaaattctcactatccaaggtgtttacaatgttt--cccaaccctcaagagaacctcactacaaagacactcaaccctaaagttac 2837826  T
Q  165 ctcctttgta 174  Q
    ||||||||||    
T  2837825 ctcctttgta 2837816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 2869582 - 2869481
Alignment:
Q  71 cttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctt 170  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||  ||||| ||||||| |||| |||||||||||||||||| || ||||  ||||||    
T  2869582 cttccaatggcgaaatctcactacccaatgtgtttacaatgtttt--ccaactcaagagaacctcactacaaagacactcaaccgtaaagttatctcctt 2869485  T
Q  171 tgta 174  Q
    ||||    
T  2869484 tgta 2869481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 39811894 - 39811803
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt 183  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||||| |   |||||||||||||  |||||||||    
T  39811894 acccaaggtgattacaatgtttttctcaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagtt 39811803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 4484644 - 4484698
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  4484644 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt 4484698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 15903779 - 15903660
Alignment:
Q  72 ttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctccttt 171  Q
    ||||||||||||||||||| || |||| ||| ||||||||  ||||| ||||||||||| |||| ||||||||||| ||||||| |  ||| |||| |||    
T  15903779 ttccaatggtgaaatctcattatccaatgtgtttacaatg--tttcctaacccaagagaacctcactacaaagacattcaacccaaaggttacctcattt 15903682  T
Q  172 gt-aatccaagtttctctctct 192  Q
    || || |||| |||||||||||    
T  15903681 gtaaacccaaatttctctctct 15903660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 25398660 - 25398710
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa 77  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25398660 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa 25398710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 25403798 - 25403848
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa 77  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25403798 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa 25403848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 25407787 - 25407837
Alignment:
Q  27 aatatgaaccctaaaagagaagacgctagaggaagctttagatccttccaa 77  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25407787 aatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa 25407837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 1344435 - 1344333
Alignment:
Q  72 ttccaatggtgaaat-ctcactacccaaggtgattacaatgtttttcccaacc-caagagaccctctctacaaagacactcaaccctagagttccctcct 169  Q
    ||||||||||||||| ||||||||| ||| || |||||||||||  ||||||| ||||||| |||| ||||||||||||||||||||| | || |||| |    
T  1344435 ttccaatggtgaaattctcactaccgaagatgtttacaatgttt--cccaacctcaagagaacctcactacaaagacactcaaccctaaaattacctcat 1344338  T
Q  170 ttgta 174  Q
    |||||    
T  1344337 ttgta 1344333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 275
Target Start/End: Complemental strand, 6266567 - 6266499
Alignment:
Q  205 actctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||   |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  6266567 actctccttcaaat--ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 6266499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 32289432 - 32289373
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  32289432 aaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 32289373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 30833200 - 30833146
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  30833200 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 30833146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 42269617 - 42269702
Alignment:
Q  114 tttcccaaccc--aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaat-ccaagtttctctctctaagc 196  Q
    |||||||||||  |||||| |||| |||||||||||||||||| || |||| ||||||||||| | ||||||||||||||| ||||    
T  42269617 tttcccaaccctcaagagaacctcactacaaagacactcaaccttaaagttacctcctttgtattcccaagtttctctctcaaagc 42269702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 41586429 - 41586351
Alignment:
Q  83 aaatctcactacccaaggtgattacaa-tgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagtt 162  Q
    |||||||||||||||||||| |||||| ||||||  |||||||||||||  |||||  |||||||||||||||||| ||||    
T  41586429 aaatctcactacccaaggtgtttacaactgtttt--ccaacccaagagaagctctcaccaaagacactcaaccctaaagtt 41586351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 12647748 - 12647813
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  12647748 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 12647813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 32289367 - 32289303
Alignment:
Q  262 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| || | |||||||||||||| ||| ||||||||||| ||| |||||||||||    
T  32289367 tcgtgtcacgattggagcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagc 32289303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 12647690 - 12647744
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  12647690 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 12647744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 4484703 - 4484768
Alignment:
Q  261 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||| | || |||||||||||||| ||| |||||||||||  || |||||||||||    
T  4484703 atcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatagaaacttaacgagc 4484768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 9296056 - 9296016
Alignment:
Q  286 cccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  9296056 cccaaggtatgaccagtccttatcaaggatacttaatgagc 9296016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 32246968 - 32247011
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  32246968 cccaaggtgattacaatgtttttcccaacctaagaaacactctc 32247011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 3278176 - 3278307
Alignment:
Q  41 aagagaagacgctagaggaagcttta-gatccttccaatggtgaaatctcactacccaaggtgattac-aatgtttttcccaacccaagagaccctctct 138  Q
    ||||||| |||||| |||||| |||  ||||| ||| ||  ||||||||||||| |||||||| |||| ||||||||  |||||||||||||  |||||     
T  3278176 aagagaaaacgctaaaggaagttttttgatccgtcctataatgaaatctcactatccaaggtgtttacaaatgtttt--ccaacccaagagaatctctca 3278273  T
Q  139 acaaagacactcaaccctagagttccctcctttg 172  Q
     ||| || ||||||||||| |||| |||| ||||    
T  3278274 tcaacgatactcaaccctaaagttacctcatttg 3278307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 25410066 - 25410111
Alignment:
Q  281 tacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||| ||||||| ||| | |||||||||||||||||||||||||    
T  25410066 tacgtcacaaggtacgaccattccttatcaaggatacttaacgagc 25410111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 39284856 - 39284759
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg-taatccaagtttctctctc 191  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| ||||||||| |   |||||||||||||||    
T  39284856 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 39284760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 11151788 - 11151864
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 172  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  11151788 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 11151864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 42362323 - 42362247
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 172  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  42362323 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 42362247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 8348 - 8188
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    ||||||||||||||||||||| | | ||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  8348 atgaaccctaaaagagaagacacaaaaggaagcttttaatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 8251  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8250 atcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 36762 - 36603
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  36762 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttt--ccaacccaagag 36666  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  36665 atcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 36603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 43891 - 43732
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||    
T  43891 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaaaag 43795  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  43794 atcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 43732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 108; Significance: 3e-54; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 133209 - 133050
Alignment:
Q  30 atgaaccctaaaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagag 129  Q
    |||||||||||| |||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  133209 atgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttt--cccaacccaagag 133113  T
Q  130 accctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  133112 atcctcactacaaagaaactcaaccctaaagttccctcctttgtaatccaagtttctctctct 133050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 5888 - 6011
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||| |||| |||||||||||||||||| || |||| |||    
T  5888 gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttg--ccaacccaagagatcctcactacaaagacactcaaccataaagttacct 5985  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
    |||||||||||||| |||||||||||    
T  5986 cctttgtaatccaattttctctctct 6011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 2697 - 2819
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccct 166  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||| |||| ||||||||| ||| ||||||| |||| |||    
T  2697 gatccttccaatggtgaaatctcactacgcaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagaaacttaaccctaaagttacct 2794  T
Q  167 cctttgtaatccaagtttctctctct 192  Q
      |||||||||||| |||||||||||    
T  2795 tttttgtaatccaa-tttctctctct 2819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 45374 - 45525
Alignment:
Q  40 aaagagaagacgctagaggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctcta 139  Q
    ||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||| |||| |||    
T  45374 aaagagaagacacaaaaggaagcttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcacaacccaagagatcctcacta 45471  T
Q  140 c-aaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    | ||||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  45472 caaaagacattcaaccctaaagttacctcctttgtaatccaagtttctctctct 45525  T

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Target: scaffold0036 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 85875 - 86006
Alignment:
Q  56 aggaagctttagatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc 155  Q
    |||||| ||| |||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  85875 aggaagtttttgatccttccaatggtgaaatctcactacccaaagtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 85972  T
Q  156 tagagttccctcctttgtaatccaagtttctctc 189  Q
    || |||| ||||||||||||||||||||||||||    
T  85973 taaagttacctcctttgtaatccaagtttctctc 86006  T

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Target: scaffold0148 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 10934 - 11064
Alignment:
Q  67 gatccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacc--caagagaccctctctacaaagacactcaaccctagagttcc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| |||||||||||||||||| || |||| |    
T  10934 gatccttccaatggtgaaatctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccataaagttac 11031  T
Q  165 ctcctttgtaatcc-aagtttctctctctaagc 196  Q
    |||||||||| ||| ||||||||||||| ||||    
T  11032 ctcctttgtattccaaagtttctctctcaaagc 11064  T

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Target: scaffold0491 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 216 - 326
Target Start/End: Original strand, 9044 - 9154
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 315  Q
    |||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| |  | |||||||||||||| ||| ||||||||||| |||     
T  9044 aaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaa 9143  T
Q  316 acttaacgagc 326  Q
    |||||||||||    
T  9144 acttaacgagc 9154  T

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Target: scaffold0491; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 11470 - 11529
Alignment:
Q  216 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  11470 aaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt 11529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 11534 - 11599
Alignment:
Q  261 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||||||||||||| |  | |||||||||||||| ||| ||||||||||| ||| |||||||||||    
T  11534 atcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagc 11599  T

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Target: scaffold0176 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 17466 - 17577
Alignment:
Q  79 ggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc 178  Q
    |||||||||||||||||||||||| |||||||||||  ||||| |||||||| |  | |||||||||||||||||| || |||| |||||| ||||||||    
T  17466 ggtgaaatctcactacccaaggtgtttacaatgttt--cccaatccaagagatctccactacaaagacactcaaccgtaaagttacctcctatgtaatcc 17563  T
Q  179 aagtttctctctct 192  Q
    ||| ||||||||||    
T  17564 aaggttctctctct 17577  T

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Target: scaffold0078 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 23736 - 23859
Alignment:
Q  68 atccttccaatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctc 167  Q
    ||||||| |||||||| |||||||||||||||||||||||||  ||||| ||||||||| ||| |||| ||| |||||| ||||||| || |||| ||||    
T  23736 atccttctaatggtgacatctcactacccaaggtgattacaa--ttttttccaacccaatagaacctcactataaagacgctcaaccttaaagttacctc 23833  T
Q  168 ctttgtaatc-caagtttctctctct 192  Q
    | |||||||| |||||||||||||||    
T  23834 cattgtaatctcaagtttctctctct 23859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 22199 - 22094
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 320  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| | || |||||| ||||||| |||  ||||||||||  ||||||||    
T  22199 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcagtgatactta 22100  T
Q  321 acgagc 326  Q
    ||||||    
T  22099 acgagc 22094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 34967 - 34863
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 192  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| ||||||||||    
T  34967 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctct 34869  T
Q  193 aagctc 198  Q
    ||||||    
T  34868 aagctc 34863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 3754 - 3663
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccc-tagagttccctcctttgtaatccaagtt 183  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||| |   |||||||||||||  |||||||||    
T  3754 acccaaggtgattacaatgtttttcctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagtt 3663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 9549 - 9514
Alignment:
Q  93 acccaaggtgattacaatgtttttcccaacccaaga 128  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9549 acccaaggtgattacaatgtttttcccaacctaaga 9514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 806 - 707
Alignment:
Q  177 ccaagtttctctctcta--agctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatt 274  Q
    ||||||||||||||||   ||||| ||||| ||||||| |||||  |||||||||||||| |||||||||| ||||| |||||| |||||||||||||||    
T  806 ccaagtttctctctcttctagctcatccaagctctcctccaaaat-ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt 708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 6079 - 6014
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  6079 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 6014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 6137 - 6083
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  6137 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 6083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 2908 - 2962
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  2908 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 2962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 2966 - 3031
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||| |||||||||||||    
T  2966 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaagaatacttaacgagc 3031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 4091 - 4156
Alignment:
Q  259 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagc 326  Q
    |||| |||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||    
T  4091 caattgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagc 4156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 4033 - 4087
Alignment:
Q  221 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 275  Q
    ||||||| |||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  4033 ctgcacaggaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 542 - 585
Alignment:
Q  94 cccaaggtgattacaatgtttttcccaacccaagagaccctctc 137  Q
    |||||||||||||||||||||||||||||| |||| || |||||    
T  542 cccaaggtgattacaatgtttttcccaacctaagaaactctctc 585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 5794 - 5728
Alignment:
Q  125 aagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatcc-aagtttctctct 190  Q
    |||||| |||| ||||||||||||||||||||  |||| ||||||||||| ||| | ||||||||||    
T  5794 aagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcctaggtttctctct 5728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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