View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1213_low_84 (Length: 272)
Name: NF1213_low_84
Description: NF1213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1213_low_84 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 27328323 - 27328068
Alignment:
| Q |
1 |
aacgatcatgttcgagtgtgtctatggtgtttctccatgttgtggtacgttcaagagttactgactttgggtgacctggatcattgatcaattggacatt |
100 |
Q |
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| T |
27328323 |
aacgatcatgttcgagtgtgtctatggtgtttgtccatgttgtggtacgttcaagagttactgactttgggtgacctggatcattgatcaattggacatt |
27328224 |
T |
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| Q |
101 |
ggcccggtctgaaacaattgctcccct-acctttaattgacgaagtaagatgatgacatgtgttcagtccatgcttttagagccgtttcatgctacttct |
199 |
Q |
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||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
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| T |
27328223 |
ggcccggtctgaaacaattgctcccctaacctttaatcgacgaagtaagatgatgacatgtgttcagtccattctttcagagccgtttcatgctacttct |
27328124 |
T |
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| Q |
200 |
tttgcggcctcaagagatttatttatttattttacaatgaagtggattctttgcgg |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27328123 |
tttgcggcctcaagagatttatttatttattttacaatgaagtggattctttgcgg |
27328068 |
T |
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