View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12141_low_1 (Length: 560)

Name: NF12141_low_1
Description: NF12141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12141_low_1
NF12141_low_1
[»] chr1 (52 HSPs)
chr1 (227-512)||(46095480-46095766)
chr1 (28-158)||(46095282-46095411)
chr1 (28-104)||(38473833-38473909)
chr1 (28-102)||(9974702-9974776)
chr1 (28-104)||(19315498-19315574)
chr1 (36-104)||(23228409-23228477)
chr1 (28-91)||(8141693-8141756)
chr1 (28-94)||(7608973-7609039)
chr1 (28-102)||(19274419-19274493)
chr1 (28-102)||(50099080-50099154)
chr1 (28-102)||(52350131-52350205)
chr1 (28-101)||(23767621-23767694)
chr1 (28-101)||(49814161-49814234)
chr1 (29-101)||(12964507-12964579)
chr1 (12-75)||(17984057-17984121)
chr1 (36-104)||(37216754-37216822)
chr1 (28-102)||(45350921-45350996)
chr1 (28-102)||(18782296-18782370)
chr1 (28-102)||(25800503-25800577)
chr1 (28-101)||(25988478-25988552)
chr1 (29-94)||(5400739-5400804)
chr1 (28-101)||(33673878-33673951)
chr1 (29-102)||(41105876-41105949)
chr1 (28-104)||(49973800-49973876)
chr1 (36-103)||(32373768-32373834)
chr1 (36-91)||(49094926-49094981)
chr1 (28-102)||(24204678-24204751)
chr1 (28-102)||(50533243-50533317)
chr1 (41-102)||(36157898-36157958)
chr1 (54-102)||(7553220-7553268)
chr1 (61-104)||(6710959-6711002)
chr1 (54-101)||(49973978-49974025)
chr1 (28-62)||(12964779-12964813)
chr1 (118-148)||(30281818-30281848)
chr1 (54-104)||(48802278-48802328)
chr1 (49-91)||(48802551-48802593)
chr1 (54-103)||(19315784-19315833)
chr1 (54-95)||(25988227-25988268)
chr1 (54-103)||(46095023-46095072)
chr1 (54-95)||(46825675-46825716)
chr1 (54-102)||(5401014-5401062)
chr1 (54-102)||(7651806-7651854)
chr1 (54-102)||(16508132-16508180)
chr1 (36-104)||(18917383-18917450)
chr1 (54-102)||(22351074-22351122)
chr1 (54-102)||(28425312-28425360)
chr1 (64-104)||(30281765-30281805)
chr1 (54-102)||(44978717-44978765)
chr1 (54-102)||(46051594-46051642)
chr1 (119-151)||(48802232-48802264)
chr1 (54-102)||(52146882-52146930)
chr1 (54-102)||(52350128-52350176)
[»] chr3 (47 HSPs)
chr3 (28-102)||(27070946-27071020)
chr3 (28-102)||(19268381-19268455)
chr3 (28-102)||(3697006-3697080)
chr3 (28-102)||(20813648-20813722)
chr3 (28-102)||(33151843-33151917)
chr3 (28-102)||(36315179-36315253)
chr3 (36-102)||(50287426-50287492)
chr3 (28-101)||(20086521-20086594)
chr3 (28-104)||(19664399-19664475)
chr3 (28-95)||(20760278-20760345)
chr3 (36-103)||(20913969-20914036)
chr3 (36-103)||(20922087-20922154)
chr3 (28-103)||(32651027-32651102)
chr3 (28-95)||(44152567-44152634)
chr3 (28-102)||(21656378-21656452)
chr3 (28-102)||(47329382-47329455)
chr3 (28-94)||(52821268-52821334)
chr3 (36-85)||(33473454-33473503)
chr3 (36-103)||(22851855-22851922)
chr3 (36-103)||(51562021-51562088)
chr3 (54-104)||(52820996-52821046)
chr3 (28-102)||(53195874-53195948)
chr3 (36-101)||(31122523-31122588)
chr3 (36-104)||(55164330-55164398)
chr3 (36-91)||(40922380-40922435)
chr3 (36-91)||(48651119-48651174)
chr3 (29-103)||(35346673-35346746)
chr3 (28-101)||(21890032-21890104)
chr3 (28-92)||(38446347-38446410)
chr3 (54-102)||(51475452-51475500)
chr3 (19-62)||(29677407-29677450)
chr3 (28-91)||(45380467-45380530)
chr3 (28-62)||(21564396-21564430)
chr3 (60-102)||(28699815-28699857)
chr3 (119-149)||(29677349-29677379)
chr3 (118-151)||(20813737-20813770)
chr3 (54-95)||(21890314-21890355)
chr3 (54-95)||(26455478-26455519)
chr3 (28-65)||(33473196-33473233)
chr3 (59-104)||(35608339-35608384)
chr3 (36-101)||(37247817-37247882)
chr3 (54-102)||(1016933-1016981)
chr3 (64-104)||(1687805-1687845)
chr3 (119-151)||(20760368-20760400)
chr3 (54-102)||(21564640-21564688)
chr3 (54-102)||(21656662-21656710)
chr3 (54-94)||(45380217-45380257)
[»] chr2 (44 HSPs)
chr2 (28-102)||(28650635-28650709)
chr2 (28-102)||(16246400-16246474)
chr2 (28-103)||(17484757-17484832)
chr2 (28-102)||(920882-920956)
chr2 (28-102)||(19180282-19180356)
chr2 (28-102)||(23673080-23673154)
chr2 (28-103)||(1106766-1106841)
chr2 (28-95)||(8899549-8899616)
chr2 (28-102)||(2455870-2455944)
chr2 (28-102)||(7297439-7297513)
chr2 (28-102)||(7378823-7378897)
chr2 (28-102)||(9276434-9276508)
chr2 (28-102)||(9331625-9331699)
chr2 (28-102)||(41178226-41178300)
chr2 (36-104)||(36444443-36444511)
chr2 (28-100)||(38750910-38750982)
chr2 (39-104)||(17134087-17134152)
chr2 (28-101)||(27328448-27328521)
chr2 (50-102)||(41500722-41500774)
chr2 (31-102)||(12759959-12760030)
chr2 (36-102)||(3430839-3430905)
chr2 (28-102)||(11949636-11949710)
chr2 (28-101)||(36210907-36210980)
chr2 (38-103)||(37838139-37838203)
chr2 (36-92)||(3358173-3358228)
chr2 (54-101)||(1106509-1106556)
chr2 (36-102)||(2056787-2056852)
chr2 (28-62)||(7379110-7379144)
chr2 (54-104)||(17484497-17484547)
chr2 (64-102)||(19180575-19180613)
chr2 (28-102)||(33107176-33107250)
chr2 (54-104)||(42629843-42629893)
chr2 (54-95)||(16246397-16246438)
chr2 (28-101)||(19511483-19511556)
chr2 (54-102)||(771925-771973)
chr2 (28-92)||(2315182-2315246)
chr2 (54-102)||(3358099-3358147)
chr2 (54-94)||(3430828-3430868)
chr2 (28-68)||(16246147-16246187)
chr2 (54-94)||(17134126-17134166)
chr2 (57-101)||(22066628-22066672)
chr2 (119-151)||(28650327-28650359)
chr2 (119-147)||(37838096-37838124)
chr2 (54-102)||(42630106-42630154)
[»] chr5 (45 HSPs)
chr5 (28-102)||(30297956-30298030)
chr5 (28-102)||(4016080-4016154)
chr5 (28-102)||(19661838-19661912)
chr5 (28-102)||(20408393-20408467)
chr5 (28-102)||(30208604-30208678)
chr5 (28-102)||(41282202-41282276)
chr5 (29-101)||(40074811-40074883)
chr5 (28-103)||(8689431-8689506)
chr5 (28-102)||(27116300-27116375)
chr5 (28-95)||(39824423-39824490)
chr5 (28-102)||(6331237-6331311)
chr5 (28-102)||(6600343-6600417)
chr5 (28-102)||(33760677-33760751)
chr5 (28-102)||(43166467-43166541)
chr5 (28-101)||(20079464-20079537)
chr5 (36-104)||(20517016-20517084)
chr5 (28-95)||(3352208-3352275)
chr5 (36-102)||(26593495-26593561)
chr5 (19-101)||(27457363-27457444)
chr5 (36-102)||(31710142-31710208)
chr5 (28-102)||(42993378-42993452)
chr5 (28-101)||(6251854-6251927)
chr5 (29-94)||(11692355-11692420)
chr5 (19-66)||(39002192-39002239)
chr5 (36-102)||(6740170-6740236)
chr5 (28-102)||(8215760-8215834)
chr5 (28-102)||(11000935-11001009)
chr5 (60-101)||(445084-445125)
chr5 (28-101)||(23129120-23129193)
chr5 (28-104)||(35342038-35342114)
chr5 (19-102)||(11935337-11935420)
chr5 (28-103)||(17002363-17002438)
chr5 (28-102)||(28078612-28078686)
chr5 (38-91)||(16096176-16096229)
chr5 (28-91)||(37923605-37923668)
chr5 (31-101)||(567718-567788)
chr5 (54-92)||(8215799-8215837)
chr5 (28-102)||(14717465-14717539)
chr5 (31-65)||(16096198-16096232)
chr5 (64-102)||(26035315-26035353)
chr5 (54-103)||(14952212-14952261)
chr5 (54-95)||(20079461-20079502)
chr5 (119-151)||(26035267-26035299)
chr5 (36-92)||(27509848-27509904)
chr5 (54-102)||(28078354-28078402)
[»] chr6 (26 HSPs)
chr6 (28-103)||(6785305-6785380)
chr6 (28-102)||(12626496-12626570)
chr6 (36-102)||(1915558-1915624)
chr6 (28-101)||(29050133-29050206)
chr6 (28-95)||(8178456-8178524)
chr6 (28-94)||(16193177-16193244)
chr6 (28-102)||(17942898-17942972)
chr6 (36-102)||(6503578-6503644)
chr6 (36-94)||(12613036-12613094)
chr6 (28-101)||(26231139-26231212)
chr6 (29-102)||(30378877-30378950)
chr6 (54-101)||(17428222-17428269)
chr6 (28-102)||(3259014-3259088)
chr6 (54-95)||(12612927-12612968)
chr6 (54-102)||(3258756-3258804)
chr6 (54-102)||(9382663-9382711)
chr6 (28-103)||(1077093-1077168)
chr6 (28-74)||(3408077-3408123)
chr6 (28-102)||(26393216-26393290)
chr6 (54-95)||(6503614-6503655)
chr6 (36-101)||(10256098-10256163)
chr6 (119-148)||(26392913-26392942)
chr6 (54-102)||(12626780-12626828)
chr6 (54-102)||(17943180-17943228)
chr6 (54-102)||(29050416-29050464)
chr6 (119-147)||(30379225-30379253)
[»] chr7 (51 HSPs)
chr7 (21-102)||(29739561-29739642)
chr7 (28-101)||(35600329-35600402)
chr7 (28-104)||(31793826-31793902)
chr7 (28-104)||(45723698-45723774)
chr7 (28-103)||(42979545-42979620)
chr7 (28-102)||(30798575-30798649)
chr7 (36-101)||(221157-221222)
chr7 (38-104)||(39033919-39033986)
chr7 (28-103)||(44800617-44800692)
chr7 (28-102)||(18353004-18353078)
chr7 (36-102)||(27364554-27364620)
chr7 (28-102)||(44544269-44544343)
chr7 (28-102)||(47219005-47219079)
chr7 (28-101)||(11476763-11476836)
chr7 (28-103)||(8162919-8162994)
chr7 (36-95)||(11050476-11050535)
chr7 (36-95)||(38427777-38427836)
chr7 (28-101)||(2960792-2960865)
chr7 (40-85)||(4923093-4923138)
chr7 (29-102)||(37394206-37394278)
chr7 (36-91)||(7335931-7335986)
chr7 (28-102)||(1469700-1469774)
chr7 (28-102)||(43968466-43968540)
chr7 (28-66)||(44800366-44800404)
chr7 (36-102)||(47281341-47281407)
chr7 (36-102)||(48628665-48628731)
chr7 (54-102)||(27773025-27773073)
chr7 (42-94)||(39241832-39241884)
chr7 (54-102)||(47294495-47294543)
chr7 (54-104)||(2960587-2960637)
chr7 (28-62)||(7336206-7336240)
chr7 (54-104)||(23842192-23842242)
chr7 (64-101)||(22132793-22132830)
chr7 (54-95)||(29248238-29248279)
chr7 (54-103)||(33884213-33884262)
chr7 (29-62)||(39033932-39033965)
chr7 (64-101)||(40521321-40521358)
chr7 (54-103)||(47119879-47119928)
chr7 (54-103)||(47219289-47219338)
chr7 (54-102)||(11050210-11050258)
chr7 (119-151)||(11476457-11476489)
chr7 (54-102)||(11476505-11476553)
chr7 (54-102)||(30876403-30876451)
chr7 (54-102)||(31684083-31684131)
chr7 (54-102)||(31684338-31684386)
chr7 (54-102)||(34378557-34378605)
chr7 (54-102)||(37393947-37393995)
chr7 (54-102)||(42888764-42888812)
chr7 (54-102)||(43968463-43968511)
chr7 (36-92)||(47271851-47271907)
chr7 (54-102)||(47294240-47294288)
[»] scaffold0184 (1 HSPs)
scaffold0184 (28-104)||(12953-13029)
[»] scaffold0078 (1 HSPs)
scaffold0078 (28-104)||(59815-59891)
[»] chr4 (48 HSPs)
chr4 (29-101)||(48149360-48149432)
chr4 (29-102)||(50542562-50542635)
chr4 (28-104)||(44490068-44490144)
chr4 (28-91)||(1425287-1425350)
chr4 (28-95)||(17847302-17847369)
chr4 (31-102)||(17847334-17847405)
chr4 (36-103)||(33807995-33808062)
chr4 (28-95)||(42273667-42273734)
chr4 (28-102)||(8882220-8882294)
chr4 (28-102)||(12196338-12196412)
chr4 (28-102)||(17993224-17993298)
chr4 (28-102)||(19496352-19496426)
chr4 (28-102)||(31208608-31208682)
chr4 (28-102)||(32118574-32118648)
chr4 (36-101)||(23552923-23552988)
chr4 (42-102)||(31590937-31590997)
chr4 (28-103)||(28812493-28812568)
chr4 (28-94)||(22298387-22298452)
chr4 (28-101)||(10588442-10588514)
chr4 (29-102)||(20534313-20534386)
chr4 (28-104)||(14564654-14564730)
chr4 (28-91)||(37381717-37381780)
chr4 (28-95)||(39995374-39995441)
chr4 (28-85)||(15984887-15984944)
chr4 (42-103)||(33693555-33693616)
chr4 (54-95)||(33807984-33808025)
chr4 (28-95)||(9339333-9339400)
chr4 (36-103)||(25730099-25730166)
chr4 (28-103)||(31617642-31617717)
chr4 (28-62)||(28159913-28159947)
chr4 (28-74)||(28160160-28160206)
chr4 (54-104)||(48707937-48707987)
chr4 (54-103)||(11795102-11795151)
chr4 (54-103)||(15985154-15985203)
chr4 (54-95)||(17847299-17847340)
chr4 (54-103)||(33174224-33174273)
chr4 (64-101)||(33693283-33693320)
chr4 (29-101)||(51371286-51371356)
chr4 (26-62)||(8433762-8433798)
chr4 (54-102)||(17993221-17993269)
chr4 (119-151)||(19496443-19496475)
chr4 (119-151)||(22298331-22298363)
chr4 (54-102)||(26017312-26017360)
chr4 (54-102)||(28264787-28264835)
chr4 (54-94)||(31973735-31973775)
chr4 (28-92)||(35929910-35929974)
chr4 (54-102)||(44490463-44490511)
chr4 (54-102)||(49118755-49118803)
[»] chr8 (35 HSPs)
chr8 (28-102)||(35443170-35443245)
chr8 (36-102)||(15846998-15847065)
chr8 (28-102)||(513168-513242)
chr8 (28-102)||(39295358-39295432)
chr8 (29-92)||(1293356-1293419)
chr8 (36-91)||(4649021-4649076)
chr8 (28-95)||(9884723-9884790)
chr8 (36-91)||(38106971-38107026)
chr8 (36-103)||(38633919-38633986)
chr8 (36-91)||(43806748-43806803)
chr8 (35-103)||(9056580-9056648)
chr8 (31-95)||(27428432-27428496)
chr8 (28-92)||(39513546-39513610)
chr8 (19-62)||(3875839-3875882)
chr8 (36-103)||(42988441-42988508)
chr8 (28-104)||(23972504-23972580)
chr8 (54-101)||(440984-441031)
chr8 (36-91)||(9056553-9056607)
chr8 (28-103)||(38208611-38208686)
chr8 (19-102)||(259867-259952)
chr8 (28-102)||(440700-440774)
chr8 (19-102)||(655969-656054)
chr8 (19-102)||(841704-841789)
chr8 (36-102)||(2533132-2533198)
chr8 (28-66)||(24430527-24430565)
chr8 (28-101)||(24430778-24430852)
chr8 (28-66)||(41536483-41536521)
chr8 (58-91)||(27428430-27428463)
chr8 (36-101)||(28707661-28707725)
chr8 (54-102)||(3876052-3876100)
chr8 (54-102)||(12010696-12010744)
chr8 (54-102)||(22683937-22683985)
chr8 (54-102)||(22684192-22684240)
chr8 (54-102)||(36400019-36400067)
chr8 (54-102)||(37933531-37933579)
[»] scaffold0031 (1 HSPs)
scaffold0031 (36-102)||(101216-101282)
[»] scaffold0727 (1 HSPs)
scaffold0727 (36-101)||(5044-5109)
[»] scaffold0096 (1 HSPs)
scaffold0096 (28-101)||(47823-47896)
[»] scaffold0693 (1 HSPs)
scaffold0693 (36-102)||(5242-5308)
[»] scaffold0005 (1 HSPs)
scaffold0005 (28-104)||(252645-252721)
[»] scaffold0122 (1 HSPs)
scaffold0122 (28-102)||(11225-11299)
[»] scaffold1986 (2 HSPs)
scaffold1986 (36-74)||(2-40)
scaffold1986 (54-95)||(10-51)
[»] scaffold0542 (1 HSPs)
scaffold0542 (28-66)||(1949-1987)
[»] scaffold0117 (1 HSPs)
scaffold0117 (54-104)||(14536-14586)
[»] scaffold1562 (1 HSPs)
scaffold1562 (49-102)||(707-760)
[»] scaffold1158 (1 HSPs)
scaffold1158 (49-102)||(1833-1886)
[»] scaffold0004 (1 HSPs)
scaffold0004 (29-66)||(219034-219071)
[»] scaffold0338 (1 HSPs)
scaffold0338 (54-102)||(5744-5792)


Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 227 - 512
Target Start/End: Original strand, 46095480 - 46095766
Alignment:
Q  227 gtgcaccgggtttacgcacttctctttgagtgtattctagttattttttacataaaatggaagtgtgtaaagtttgacggatccacccaattattgttct 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46095480 gtgcaccgggtttacgcacttctctttgagtgtattctagttattttttacataaaatggaagtgtgtaaagtttgacggatccacccaattattgttct 46095579  T
Q  327 caaaattcacttgtcttgttgatgacgatccacccaattaatttaggctccaccataattccataacacttttaaccttctataatataatattgagctg 426  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46095580 caaagttcacttgtcttgttgatgacgatccacccaattaatttaggctccaccataattccataacacttttatccttctataatataatattgagctg 46095679  T
Q  427 atatcaacat-aaaaagttttctgcaaatctgaatctacagaactctaccatatagcaaaatgctttactgccaagtcacaaccgga 512  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46095680 atatcaacataaaaaagttttctgcaaatctgaatctacagaactctaccatatagcaaaatgctttactgccaagtcacaaccgga 46095766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 46095282 - 46095411
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgagnnnnnnnnnnnnntttaaaggac 127  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||              ||||||||||    
T  46095282 ctaaaaggacttgtttgagatttttgaaacttaaaagacttgtttgaaacttttgaaacttaaaggacgactttga-aaaaaacgaaaaatttaaaggac 46095380  T
Q  128 ctttagatacatttgacctaaaatctaccat 158  Q
    |||||||| ||||||| ||||||||||||||    
T  46095381 ctttagatgcatttgatctaaaatctaccat 46095411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 38473833 - 38473909
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  38473833 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttgag 38473909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 9974776 - 9974702
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||| | ||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||    
T  9974776 ctaaaaggacttgtttggaacttttgaaacttaaaagatttgtttgggacttttgaaacttaaaggaccactttg 9974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 19315574 - 19315498
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||||||||||||| || |||||||||||||| |||   ||||| |||||||||||||||||||| ||||||||    
T  19315574 ctaaaagaacttgtttgagacttttgaaacttaaaggaccactttgggacttttgaaatttaaaggacgactttgag 19315498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 23228409 - 23228477
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    |||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||||    
T  23228409 acttgtttgggacttttgaaacttaaatgacttgtttgagacttttgaaacttaaaggaccactttgag 23228477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 8141693 - 8141756
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||    
T  8141693 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 8141756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 7608973 - 7609039
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    ||||||| |||||||||||| | |||||||||||| ||||||||||| |||||||||| ||||||||    
T  7608973 ctaaaaggacttgtttgggactgttgaaacttaaaggacttgtttgggacttttgaaacttaaagga 7609039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 19274493 - 19274419
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||| ||||||| ||||||||| |||| ||||||||||| |||||||||| ||||||||| ||||||    
T  19274493 ctaaaaggacttatttgggacttttgaaacataaaggacttgtttgggacttttgaaacttaaaggacgactttg 19274419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 50099154 - 50099080
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||  |||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  50099154 ctaaaaggtcttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttg 50099080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 52350131 - 52350205
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| |||   |||||||||||||||| ||||||||| ||||||    
T  52350131 ctaaaaggacttgtttgggacttttgaaacttaaaggacgactttggaacttttgaaacttaaaggacgactttg 52350205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 23767621 - 23767694
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| |||| |||| || |||||||||||||| ||||||||||| |||||||||| ||||||||| |||||    
T  23767621 ctaaaaggacttatttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgacttt 23767694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 49814234 - 49814161
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||| ||||||||||| | |||||||||||||| ||||||||| | |||||||||| ||||||||| |||||    
T  49814234 ctaaaataacttgtttggaacttttgaaacttaaaggacttgtttaggacttttgaaacttaaaggaccacttt 49814161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 12964579 - 12964507
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||||||| || |||||||||||||| ||||||||||  |||||||||| |||||| || |||||    
T  12964579 taaaagaacttgtttgagacttttgaaacttaaaggacttgtttgagacttttgaaacttaaagaaccacttt 12964507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 17984057 - 17984121
Alignment:
Q  12 atcatcac-atcatcctctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttgga 75  Q
    |||||||| ||||| || |||||| |||||||||||| |||||||||||||||||||||||||||    
T  17984057 atcatcactatcattctgtaaaaggacttgtttgggacttttgaaacttaaaagacttgtttgga 17984121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 37216822 - 37216754
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||||| || ||||||||||||||  |||||||||| |||||||||| ||||||||| ||||||||    
T  37216822 acttgtttgagacttttgaaacttaaagaacttgtttgggacttttgaaacttaaaggacgactttgag 37216754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 45350921 - 45350996
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaa-gacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||  |||||||||| ||||| ||| ||||||    
T  45350921 ctaaaaaaacttgtttgggacttttgaaacttaaaaggacttgtttgagacttttgaaacttaaaagacgactttg 45350996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 18782296 - 18782370
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| | ||||||||| |||||||||| ||||| ||| ||||||    
T  18782296 ctaaaaggacttgtttgagacttttgaaacttaaagggcttgtttgggacttttgaaacttaaatgaccactttg 18782370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 25800577 - 25800503
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||  |||||||||| ||||| ||| ||||||    
T  25800577 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaagacgactttg 25800503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 25988478 - 25988552
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaa-gacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||| || ||||||||||||||| ||||||||||  |||||||||| ||||||||| |||||    
T  25988478 ctaaaaggacttgtttgagacttttgaaacttaaaaggacttgtttgagacttttgaaacttaaaggacgacttt 25988552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 5400804 - 5400739
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    |||||| ||||||||| || |||||||||||||| || |||||||| |||||||||| ||||||||    
T  5400804 taaaaggacttgtttgagacttttgaaacttaaaggatttgtttgggacttttgaaacttaaagga 5400739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 33673951 - 33673878
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||||||||||| |||| ||||||||| |||   ||||| |||||||||| ||||||||| |||||    
T  33673951 ctaaaagaacttgtttgggacttttaaaacttaaaggaccactttgggacttttgaaacttaaaggacgacttt 33673878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 41105949 - 41105876
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| |||| ||||| | |||||||| ||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  41105949 taaaaggacttttttggaacttttgaaatttaaaggacttgtttgggacttttgaaacttaaaggacgactttg 41105876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 49973876 - 49973800
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| | ||||||| || ||||||||||| || ||||||||||| |||||||||| ||||||||| | ||||||    
T  49973876 ctaaaaggatttgtttgagacttttgaaactttaatgacttgtttgggacttttgaaacttaaaggacgattttgag 49973800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 32373768 - 32373834
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||||| || |||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||    
T  32373768 acttgtttgagacttttgaaacttaaaggacttgtttggga-ttttgaaacttaaaggaccactttga 32373834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 49094926 - 49094981
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    ||||||||| || |||||||||||||||||||||||||  |||||||||| |||||    
T  49094926 acttgtttgagacttttgaaacttaaaagacttgtttgagacttttgaaacttaaa 49094981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 24204678 - 24204751
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || ||| |||||||||| ||||||||||| |||||||||| |||||| || ||||||    
T  24204678 ctaaaaggacttgtttgagacttt-gaaacttaaaggacttgtttgggacttttgaaacttaaagaacgactttg 24204751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 50533317 - 50533243
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||  ||||||| || ||||| ||| ||||||    
T  50533317 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgagacttttgtaacttaaatgaccactttg 50533243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 36157898 - 36157958
Alignment:
Q  41 tttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||    
T  36157898 tttgggacttttgaaacttaaa-gacttgtttgagacttttgaaacttaaaggaccactttg 36157958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 7553220 - 7553268
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| |||||||||||||||||||||| ||||||||| ||||||    
T  7553220 aaactaaaaggacttgtttggaacttttgaaaattaaaggaccactttg 7553268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 6711002 - 6710959
Alignment:
Q  61 aaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||    
T  6711002 aaagacttgtttgggacttttgaaacttaaaggaccactttgag 6710959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 49973978 - 49974025
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||| ||| |||||||||| ||||||||||| |||||||||||||||    
T  49973978 aaactaaaaggacttgtttgaaacttttgaaacttaaaggacaacttt 49974025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 12964779 - 12964813
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaa 62  Q
    |||||||||||||||||||| ||||||||||||||    
T  12964779 ctaaaagaacttgtttgggacttttgaaacttaaa 12964813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 148
Target Start/End: Original strand, 30281818 - 30281848
Alignment:
Q  118 tttaaaggacctttagatacatttgacctaa 148  Q
    |||||||||||||||||||||||||||||||    
T  30281818 tttaaaggacctttagatacatttgacctaa 30281848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 48802328 - 48802278
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  48802328 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttgag 48802278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 48802551 - 48802593
Alignment:
Q  49 ttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||||||| ||||||||||| |||||||||| |||||    
T  48802551 ttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 48802593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 19315784 - 19315833
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| |||||||    
T  19315784 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 19315833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 25988268 - 25988227
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||| |||||||||||||||||||||| |||||||||    
T  25988268 aaactaaaaggacttgtttggaacttttgaaacttaaaggac 25988227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 46095072 - 46095023
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||||| |||||||| ||||||||| |||||||    
T  46095072 aaactaaaaggacttgtttggaatttttgaaacttaaaggacgactttga 46095023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 46825675 - 46825716
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||||||||||||||| |||||||||| |||||||||    
T  46825675 aaactaaaaagacttgtttgggacttttgaaacttaaaggac 46825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 5401014 - 5401062
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||||||||||||||  |||||||||| ||||||||| ||||||    
T  5401014 aaactaaaaagacttgtttgagacttttgaaacttaaaggaccactttg 5401062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 7651806 - 7651854
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  7651806 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 7651854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 16508132 - 16508180
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  16508132 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 16508180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 18917450 - 18917383
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||||| || ||||||| |||||| |||||||||||  ||||||||| ||||||||  ||||||||    
T  18917450 acttgtttgagacttttgaa-cttaaaggacttgtttggggcttttgaaacttaaaggatcactttgag 18917383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 22351122 - 22351074
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  22351122 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 22351074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 28425360 - 28425312
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  28425360 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 28425312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 30281765 - 30281805
Alignment:
Q  64 gacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  30281765 gacttgtttgagacttttgaaacttaaaggacaactttgag 30281805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 44978765 - 44978717
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  44978765 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 44978717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 46051594 - 46051642
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  46051594 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 46051642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 48802264 - 48802232
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaaaat 151  Q
    ||||||||||||||||| |||||||||||||||    
T  48802264 ttaaaggacctttagatgcatttgacctaaaat 48802232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 52146930 - 52146882
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  52146930 aaactaaaatgacttgtttgggacttttgaaacttaaaggaccactttg 52146882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 52350128 - 52350176
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  52350128 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 52350176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 1e-24; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 27070946 - 27071020
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  27070946 ctaaaaggacttgtttgggatttttgaaacttaaaagacttgtttgggacttttgaaacttaaaggacgactttg 27071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 19268455 - 19268381
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||| ||||||    
T  19268455 ctaaaaggacttgtttgggacttttgaaacttaaaagacttgtttgagacttttgaaacttaaaggaccactttg 19268381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 3697080 - 3697006
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||||||||| | ||||||||||||||  |||||||||| |||||||||| ||||||||| ||||||    
T  3697080 ctaaaagaacttgtttggaacttttgaaacttaaagaacttgtttgggacttttgaaacttaaaggaccactttg 3697006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 20813648 - 20813722
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| ||||||| || ||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||    
T  20813648 ctaaaagaatttgtttgagacttttgaaacttaaaagatttgtttgggacttttgaaacttaaaggaccactttg 20813722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 33151843 - 33151917
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||    
T  33151843 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaggacgactttg 33151917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 36315179 - 36315253
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| | |||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  36315179 ctaaaaggatttgtttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaaggaccactttg 36315253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 50287492 - 50287426
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  50287492 acttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttg 50287426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 20086521 - 20086594
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| |||||||||||| |||||||||| ||| ||||||| |||||||||||||| ||||||||| |||||    
T  20086521 ctaaaaggacttgtttgggacttttgaaactcaaaggacttgtctggaacttttgaaacttaaaggaccacttt 20086594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 19664475 - 19664399
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| |||| |||| || |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  19664475 ctaaaaggacttatttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttgag 19664399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 20760278 - 20760345
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||| |||||||||    
T  20760278 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggac 20760345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 20913969 - 20914036
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    |||||||||||| |||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||    
T  20913969 acttgtttgggacttttgaaacttaaaggacttgtttgggagttttgaaacttaaaggaccactttga 20914036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 20922087 - 20922154
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    |||||||||||| |||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||    
T  20922087 acttgtttgggacttttgaaacttaaaggacttgtttgggagttttgaaacttaaaggaccactttga 20922154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 32651027 - 32651102
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||||| |||||||| | |||||||||||||| ||||||||||  |||||||||| ||||||||| |||||||    
T  32651027 ctaaaagaatttgtttggaacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaggaccactttga 32651102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 44152634 - 44152567
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| ||||||||| || ||||||||||||||  ||||||||||||||||||||| |||||||||    
T  44152634 ctaaaaggacttgtttgagacttttgaaacttaaagaacttgtttggaacttttgaaacttaaaggac 44152567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 21656452 - 21656378
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||| | |||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||||    
T  21656452 ctaaaaggacttgtttggaacttttgaaacttaaatgacttgtttgggacttttgaaacttaaaagaccactttg 21656378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 47329382 - 47329455
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||| ||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  47329382 ctaaaaggacttgtttgggacttttgaaatttaaa-gacttgtttgggacttttgaaacttaaaggaccactttg 47329455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 52821268 - 52821334
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||    
T  52821268 ctaaaaggacttgtttgagacttttgaaacttaaatgacttgtttgggacttttgaaacttaaagga 52821334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 33473454 - 33473503
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaa 85  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  33473454 acttgtttgggacttttgaaacttaaatgacttgtttggaacttttgaaa 33473503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 22851922 - 22851855
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    |||||||| ||| |||| ||||||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  22851922 acttgtttaggacttttaaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttga 22851855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 51562088 - 51562021
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||||| || |||||||||||||||||||||||||  |||||||||| |||||| || |||||||    
T  51562088 acttgtttgagacttttgaaacttaaaagacttgtttgagacttttgaaacttaaagaaccactttga 51562021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 52821046 - 52820996
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  52821046 aaactaaaaagacttgtttggaacttttgaaacttaaaggaccactttgag 52820996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 53195948 - 53195874
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||| ||| |||||||||||||| || |||||| | |||||||||| ||||||||| ||||||    
T  53195948 ctaaaaggacttgtttaggacttttgaaacttaaatgatttgtttcggacttttgaaacttaaaggaccactttg 53195874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 31122588 - 31122523
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||| |||||||||||||| ||||||||||  |||||||||| |||||| || |||||    
T  31122588 acttgtttgggacttttgaaacttaaatgacttgtttgagacttttgaaacttaaagaactacttt 31122523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 55164330 - 55164398
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||| ||| | ||||||    
T  55164330 acttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaagacgattttgag 55164398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 40922380 - 40922435
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||| ||| |||||||||||||| ||||||||||| |||||||||| |||||    
T  40922380 acttgttttggacttttgaaacttaaaggacttgtttggtacttttgaaacttaaa 40922435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 48651174 - 48651119
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||| |||||    
T  48651174 acttgtttgggacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 48651119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 35346673 - 35346746
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||  |||||| ||| ||||| ||| |||||||    
T  35346673 taaaaggacttgtttgggacttttgaaacttaaaggacttgtttgagactttt-aaacttaaatgaccactttga 35346746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 21890104 - 21890032
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||| || |||||||||||||| ||| ||||||| |||||||||| ||||| ||| |||||    
T  21890104 ctaaaaggacttgtttgagacttttgaaacttaaaggac-tgtttgggacttttgaaacttaaaagaccacttt 21890032  T

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Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 38446410 - 38446347
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    ||||||| |||||| || || |||||||||||||| ||||||||||| |||||||||| ||||||    
T  38446410 ctaaaaggacttgtatgagacttttgaaacttaaa-gacttgtttgggacttttgaaacttaaag 38446347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 51475452 - 51475500
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| |||||||||||||||||||||| ||||||||| ||||||    
T  51475452 aaactaaaaggacttgtttggaacttttgaaacttaaaggaccactttg 51475500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 29677450 - 29677407
Alignment:
Q  19 catcatcctctaaaagaacttgtttgggatttttgaaacttaaa 62  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||    
T  29677450 catcattctctaaaaggacttgtttgagatttttgaaacttaaa 29677407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 45380467 - 45380530
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    ||||||| |||| |||| || ||||||||||||||  |||||||||| |||||||||| |||||    
T  45380467 ctaaaaggacttatttgagacttttgaaacttaaagtacttgtttgggacttttgaaacttaaa 45380530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 21564430 - 21564396
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaa 62  Q
    |||||||||||||||||||| ||||||||||||||    
T  21564430 ctaaaagaacttgtttgggacttttgaaacttaaa 21564396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 28699815 - 28699857
Alignment:
Q  60 aaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||    
T  28699815 aaaagacttgtttgggacttttgaaacttaaaggaccactttg 28699857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 149
Target Start/End: Complemental strand, 29677379 - 29677349
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaaa 149  Q
    |||||||||||||||||||||||||||||||    
T  29677379 ttaaaggacctttagatacatttgacctaaa 29677349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 20813737 - 20813770
Alignment:
Q  118 tttaaaggacctttagatacatttgacctaaaat 151  Q
    |||||||||||||||||| |||||||||||||||    
T  20813737 tttaaaggacctttagatgcatttgacctaaaat 20813770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 21890314 - 21890355
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||| |||||||||||||||||||||| |||||||||    
T  21890314 aaactaaaaggacttgtttggaacttttgaaacttaaaggac 21890355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 26455519 - 26455478
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||||||||||||||  ||||||||||||||||||||    
T  26455519 aaactaaaaagacttgtttgagacttttgaaatttaaaggac 26455478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 33473233 - 33473196
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaaga 65  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  33473233 ctaaaaggacttgtttgagatttttgaaacttaaaaga 33473196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 35608339 - 35608384
Alignment:
Q  59 taaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    |||||||||||||||| | |||||||| ||||||||| ||||||||    
T  35608339 taaaagacttgtttgggaattttgaaacttaaaggacgactttgag 35608384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 37247882 - 37247817
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||||| || |||||||||||||| ||||| |||| || |||||||| ||||| ||| |||||    
T  37247882 acttgtttgagacttttgaaacttaaatgacttctttgaaatttttgaaacttaaatgaccacttt 37247817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 1016981 - 1016933
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  1016981 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 1016933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 1687805 - 1687845
Alignment:
Q  64 gacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    |||||||||| ||||||||||| ||||||||| ||||||||    
T  1687805 gacttgtttgaaacttttgaaacttaaaggacgactttgag 1687845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 20760368 - 20760400
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaaaat 151  Q
    ||||||||||||||||| |||||||||||||||    
T  20760368 ttaaaggacctttagatgcatttgacctaaaat 20760400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 21564640 - 21564688
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  21564640 aaactaaaatgacttgtttgggacttttgaaacttaaaggaccactttg 21564688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 21656662 - 21656710
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  21656662 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 21656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 45380257 - 45380217
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    ||||| ||||||||||||||| |||||||||| ||||||||    
T  45380257 aaactaaaaagacttgtttgggacttttgaaacttaaagga 45380217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 28650635 - 28650709
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  28650635 ctaaaagaacttgtttgggacttttgaaacttaaagaacttgtttggaacttttgaaacttaaaggacaactttg 28650709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 16246400 - 16246474
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||| | |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  16246400 ctaaaaggacttgtttggaacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacaactttg 16246474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 17484757 - 17484832
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| ||||||||| || |||||||||||||| || |||||||| |||||||||||||||||||| |||||||    
T  17484757 ctaaaaggacttgtttgagacttttgaaacttaaaggatttgtttgggacttttgaaatttaaaggaccactttga 17484832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 920956 - 920882
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||| || ||||||| ||||||||| ||||||    
T  920956 ctaaaaggacttgtttgagacttttgaaacttaaaagacttgtttgggacgtttgaaacttaaaggacgactttg 920882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 19180356 - 19180282
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||    
T  19180356 ctaaaataacttgtttgggacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaggacgactttg 19180282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 23673080 - 23673154
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||    
T  23673080 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttggaatttttgaaacttaaaggacgactttg 23673154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 1106766 - 1106841
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| | |||||||||| |||||||||||||| ||||||||||| |||||||||| ||||| ||| |||||||    
T  1106766 ctaaaaggatttgtttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaaagaccactttga 1106841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 8899616 - 8899549
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| |||||||||||| |||||||||||| | ||||||||||| |||||||||| |||||||||    
T  8899616 ctaaaaggacttgtttgggacttttgaaacttataggacttgtttgggacttttgaaacttaaaggac 8899549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 2455944 - 2455870
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||| |||||| |||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||    
T  2455944 ctaaaaggacttgcttgggacttttgaaacttaaaggacttgtttgcgacttttgaaacttaaaggacgactttg 2455870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 7297439 - 7297513
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||||    
T  7297439 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaagacgactttg 7297513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 7378897 - 7378823
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||| ||||||| |||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||||    
T  7378897 ctaaaaggacttctttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaagactactttg 7378823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 9276508 - 9276434
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| |||||| |||  |||||||||| ||||||||| ||||||    
T  9276508 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgcttgagacttttgaaacttaaaggacgactttg 9276434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 9331699 - 9331625
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| |||||| |||  |||||||||| ||||||||| ||||||    
T  9331699 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgcttgagacttttgaaacttaaaggacgactttg 9331625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 41178226 - 41178300
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| | ||||||||| |||||||||| ||||||||| ||||||    
T  41178226 ctaaaaggacttgtttgagacttttgaaacttaaatggcttgtttgggacttttgaaacttaaaggacgactttg 41178300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 36444443 - 36444511
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||||| || |||||||||| ||||||||||||||  |||||||||| ||||||||| ||||||||    
T  36444443 acttgtttgtgacttttgaaactgaaaagacttgtttgagacttttgaaacttaaaggacgactttgag 36444511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 38750982 - 38750910
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactt 100  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||| ||| ||||    
T  38750982 ctaaaaggacttgtttgggacttttgaaacttaaatgacttgtttgagacttttgaaacttaaaagaccactt 38750910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 17134152 - 17134087
Alignment:
Q  39 tgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| | |||||||||||||| || ||||||||||||||| ||| ||||||||| ||||||||    
T  17134152 tgtttggaacttttgaaacttaaaggatttgtttggaacttttaaaacttaaaggaccactttgag 17134087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 27328521 - 27328448
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||| || |||||||||||||| |||   ||||| |||||||||||||||||||| |||||    
T  27328521 ctaaaaggacttgtttgagacttttgaaacttaaaggaccactttgggacttttgaaatttaaaggacgacttt 27328448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 41500722 - 41500774
Alignment:
Q  50 tttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  41500722 tttgaaacttaaatgacttgtttgggacttttgaaacttaaaggaccactttg 41500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 12759959 - 12760030
Alignment:
Q  31 aaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||| ||||||||| || | |||||||||||| ||||||||||| |||||||||| ||||| ||| ||||||    
T  12759959 aaaggacttgtttgagactgttgaaacttaaaggacttgtttgggacttttgaaacttaaaagacgactttg 12760030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 3430839 - 3430905
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||| | |||||||||||||| || |||||||  |||||||||| ||||||||| ||||||    
T  3430839 acttgtttggaacttttgaaacttaaaggatttgtttgagacttttgaaacttaaaggaccactttg 3430905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 11949636 - 11949710
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||| ||| |||||||||||||| |||   |||| ||||||||||| ||||||||| ||||||    
T  11949636 ctaaaaggacttgttttggacttttgaaacttaaaggaccactttgaaacttttgaaacttaaaggacgactttg 11949710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 36210980 - 36210907
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||| || |||||||||||||| || |||||||  |||||||||| ||||| ||| |||||    
T  36210980 ctaaaaggacttgtttgtgacttttgaaacttaaatgatttgtttgagacttttgaaacttaaatgaccacttt 36210907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 37838203 - 37838139
Alignment:
Q  38 ttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    |||||||||| |||||||||||||  ||||||||||| |||||||||| ||||||||  |||||||    
T  37838203 ttgtttgggacttttgaaacttaag-gacttgtttgggacttttgaaacttaaaggatgactttga 37838139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 3358173 - 3358228
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    |||||||||| | |||||||||||||| ||||||||||| |||||||||| ||||||    
T  3358173 acttgtttggaacttttgaaacttaaa-gacttgtttgggacttttgaaacttaaag 3358228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 1106556 - 1106509
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||| ||| |||||||||| ||||||||||||||||||||| |||||    
T  1106556 aaactaaaaggacttgtttgcaacttttgaaatttaaaggaccacttt 1106509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 2056852 - 2056787
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| || ||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||    
T  2056852 acttgtttgagacttttgaaactt-aaagatttgtttgggacatttgaaacttaaaggaccactttg 2056787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 7379110 - 7379144
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaa 62  Q
    |||||||||||||||||||| ||||||||||||||    
T  7379110 ctaaaagaacttgtttgggacttttgaaacttaaa 7379144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 17484547 - 17484497
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  17484547 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttgag 17484497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 19180575 - 19180613
Alignment:
Q  64 gacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  19180575 gacttgtttggaacttttgaaacttaaaggacgactttg 19180613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 33107176 - 33107250
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| | ||||||  || |||||||||||||| |||   |||||||||||||||| ||||||||| ||||||    
T  33107176 ctaaaaggatttgtttaagacttttgaaacttaaaggacaactttggaacttttgaaacttaaaggacgactttg 33107250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 42629893 - 42629843
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  42629893 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttgag 42629843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 16246397 - 16246438
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||| |||||||||||||||||||||| |||||||||    
T  16246397 aaactaaaaggacttgtttggaacttttgaaacttaaaggac 16246438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 19511556 - 19511483
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||||| ||||||| || ||||||||||||||  | ||||||| ||||||| ||| |||||| || |||||    
T  19511556 ctaaaagaatttgtttgagacttttgaaacttaaagaatttgtttgaaacttttaaaacttaaagaaccacttt 19511483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 771973 - 771925
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  771973 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 771925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 2315182 - 2315246
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    ||||||| | |||||||||| |||||||||||||| |||   ||||| |||||||||| ||||||    
T  2315182 ctaaaaggatttgtttgggacttttgaaacttaaaggaccattttgggacttttgaaacttaaag 2315246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 3358147 - 3358099
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  3358147 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 3358099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 3430828 - 3430868
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    ||||| ||| |||||||||||||||||||||| ||||||||    
T  3430828 aaactaaaatgacttgtttggaacttttgaaacttaaagga 3430868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 16246187 - 16246147
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagactt 68  Q
    ||||||| |||||||||||| |||||||||||||| |||||    
T  16246187 ctaaaaggacttgtttgggacttttgaaacttaaaggactt 16246147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 17134166 - 17134126
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    ||||||||| ||| |||||||||||||||||| ||||||||    
T  17134166 aaacttaaaggacctgtttggaacttttgaaacttaaagga 17134126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 22066628 - 22066672
Alignment:
Q  57 cttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||| ||||||||||| |||||||||||||||| ||| |||||    
T  22066628 cttaaatgacttgtttgggacttttgaaatttaaatgacgacttt 22066672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 28650359 - 28650327
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaaaat 151  Q
    ||||||||||||||||| |||||||||||||||    
T  28650359 ttaaaggacctttagatgcatttgacctaaaat 28650327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 147
Target Start/End: Complemental strand, 37838124 - 37838096
Alignment:
Q  119 ttaaaggacctttagatacatttgaccta 147  Q
    |||||||||||||||||||||||||||||    
T  37838124 ttaaaggacctttagatacatttgaccta 37838096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 42630106 - 42630154
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||||||||||||||  |||||||||| ||||||||| ||||||    
T  42630106 aaactaaaaagacttgtttgagacttttgaaacttaaaggaccactttg 42630154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 30297956 - 30298030
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  30297956 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttggaacttttgaaacttaaaggaccactttg 30298030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 4016080 - 4016154
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  4016080 ctaaaaggacttgtttgagatttttgaaacttaaaggacttgtttggtacttttgaaacttaaaggacgactttg 4016154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 19661838 - 19661912
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| ||||||||||||| |||||||||||| | ||||||||||| |||||||||| ||||||||||||||||    
T  19661838 ctaaaaaaacttgtttgggacttttgaaacttataggacttgtttgggacttttgaaacttaaaggacaactttg 19661912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 20408467 - 20408393
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  20408467 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttg 20408393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 30208604 - 30208678
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| | |||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  30208604 ctaaaaggaattgtttgggacttttgaaacttaaatgatttgtttgggacttttgaaatttaaaggacaactttg 30208678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 41282276 - 41282202
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  41282276 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttg 41282202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 40074883 - 40074811
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||||||| |||||    
T  40074883 taaaagaacttgtttgggacttttgaaacttaaacgacttgtttgagacttttgaaacttaaaggaccacttt 40074811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 8689506 - 8689431
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| |||| |||| || |||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  8689506 ctaaaaggacttttttgagacttttgaaacttaaaggacttgtttggaacttttgaaacttaaaggaccactttga 8689431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 27116300 - 27116375
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaa-gacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  27116300 ctaaaagaacttggttgggacttttgaaacttaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 27116375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 39824490 - 39824423
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||||    
T  39824490 ctaaaaggacttgtttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaaggac 39824423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 6331311 - 6331237
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| |||||| |||| |||||||||| ||||||||| ||||||    
T  6331311 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgcttgggacttttgaaacttaaaggacgactttg 6331237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 6600343 - 6600417
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  6600343 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttg 6600417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 33760677 - 33760751
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||    
T  33760677 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgagacttttgaaaattaaaggacgactttg 33760751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 43166467 - 43166541
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| | ||||||| || |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  43166467 ctaaaaggatttgtttgagacttttgaaacttaaaggacttgtttggaacttttgaaacttaaaggacgactttg 43166541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 20079464 - 20079537
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| |||||||||| | |||||||||||||| ||||||||||| |||||||||| ||||||||| |||||    
T  20079464 ctaaaaggacttgtttggaacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccacttt 20079537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 20517084 - 20517016
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    |||||||||||| |||||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||    
T  20517084 acttgtttgggacttttgaaacttataggacttgtttgggacttttgaaacttaaaggacgactttgag 20517016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 3352208 - 3352275
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| |||||| ||||| |||||||||||||| ||||||||||| |||||||||| |||||||||    
T  3352208 ctaaaaggacttgtatgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggac 3352275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 26593495 - 26593561
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||| | ||||||    
T  26593495 acttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaagggcgactttg 26593561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 27457363 - 27457444
Alignment:
Q  19 catcatcctctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||||||||||||||||| || |||||||||||||  ||||| ||||| | |||||||| ||||||||| |||||    
T  27457363 catcatcctctaaaagaacttgtttgagacttttgaaacttaacggacttctttggga-ttttgaaacttaaaggaccacttt 27457444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 31710208 - 31710142
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  31710208 acttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttg 31710142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 42993452 - 42993378
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| || |||||||| |||||||||| ||||||||| ||||||    
T  42993452 ctaaaaggacttgtttgtgacttttgaaacttaaaggatttgtttgggacttttgaaacttaaaggaccactttg 42993378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 6251927 - 6251854
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||| ||| |||||    
T  6251927 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgagacttttgaaacttaaatgacgacttt 6251854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 11692355 - 11692420
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    |||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||    
T  11692355 taaaaggacttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaagga 11692420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 39002192 - 39002239
Alignment:
Q  19 catcatcctctaaaagaacttgtttgggatttttgaaacttaaaagac 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  39002192 catcatcctctaaaaggacttgtttgggacttttgaaacttaaaagac 39002239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 6740170 - 6740236
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| || |||||||||||||| || |||||||| |||||||||| ||||||||| ||||||    
T  6740170 acttgtttgagacttttgaaacttaaaggatttgtttgggacttttgaaacttaaaggaccactttg 6740236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 8215834 - 8215760
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||| | |||||||| |||||  | ||||||||||||||||||| ||||||||| ||||||    
T  8215834 ctaaaaggacttgtttggaacttttgaaatttaaagaaattgtttggaacttttgaaacttaaaggacgactttg 8215760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 11000935 - 11001009
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| | |||||||||| |||||||||||||| ||||||||| | |||||||||| ||||| ||| ||||||    
T  11000935 ctaaaaggatttgtttgggacttttgaaacttaaaggacttgtttaggacttttgaaaattaaatgaccactttg 11001009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 445084 - 445125
Alignment:
Q  60 aaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  445084 aaaagacttgtttggaacttttgaaatttaaaggaccacttt 445125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 23129120 - 23129193
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||  || ||||||||||||||  | |||||||| |||||||||||||||||||| |||||    
T  23129120 ctaaaaggacttgttttagacttttgaaacttaaagaatttgtttgggacttttgaaatttaaaggaccacttt 23129193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 35342114 - 35342038
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| ||||| |||||| |||||||||||||| || |||||||| |||||| ||||||||| | | ||||||||    
T  35342114 ctaaaaggacttgattgggacttttgaaacttaaaggatttgtttgggacttttaaaatttaaaagtccactttgag 35342038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 11935420 - 11935337
Alignment:
Q  19 catcatcctctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||||||  ||||||||| || ||||||||||||||  ||||| ||| || |||| ||| ||||||||| ||||||    
T  11935420 catcatcctctaaaatgacttgtttgcgacttttgaaacttaaagtacttgattgaaatttttaaaaattaaaggacgactttg 11935337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 17002363 - 17002438
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| | |||| || || |||||||||||||| ||||||||||| |||||||||| ||||| ||| |||||||    
T  17002363 ctaaaaggatttgtctgtgacttttgaaacttaaaggacttgtttgggacttttgaaacttaaatgaccactttga 17002438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 28078612 - 28078686
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| | |||||||||| ||||||||||||||  ||||||||||  ||||||||| ||||| ||| ||||||    
T  28078612 ctaaaaggatttgtttgggacttttgaaacttaaagaacttgtttggggcttttgaaacttaaaagaccactttg 28078686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 16096176 - 16096229
Alignment:
Q  38 ttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||| ||||||||||||||  |||||||||| |||||||||| |||||    
T  16096176 ttgtttgggacttttgaaacttaaagaacttgtttgggacttttgaaacttaaa 16096229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 37923605 - 37923668
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    ||||||| ||||||||| || ||||||||||||||  |||||||||  |||||||||| |||||    
T  37923605 ctaaaaggacttgtttgagacttttgaaacttaaataacttgtttgagacttttgaaacttaaa 37923668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 567718 - 567788
Alignment:
Q  31 aaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||| ||||||||  || |||||||||||||| ||||| ||||  |||||||||| ||||||||| |||||    
T  567718 aaaggacttgttttagacttttgaaacttaaaggacttatttgagacttttgaaacttaaaggacgacttt 567788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 8215837 - 8215799
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  8215837 aaactaaaaggacttgtttggaacttttgaaatttaaag 8215799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 14717539 - 14717465
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||    ||||| |||||||||| ||||||||| ||||||    
T  14717539 ctaaaaggacttgtttgagacttttgaaacttaaaggaacactttgggacttttgaaacttaaaggaccactttg 14717465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 16096198 - 16096232
Alignment:
Q  31 aaagaacttgtttgggatttttgaaacttaaaaga 65  Q
    ||||||||||||||||| |||||||||||||||||    
T  16096198 aaagaacttgtttgggacttttgaaacttaaaaga 16096232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 26035353 - 26035315
Alignment:
Q  64 gacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  26035353 gacttgtttgggacttttgaaatttaaaggaccactttg 26035315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 14952261 - 14952212
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| |||||||    
T  14952261 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 14952212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 20079461 - 20079502
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||| |||||||||||||||||||||| |||||||||    
T  20079461 aaactaaaaggacttgtttggaacttttgaaacttaaaggac 20079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 26035299 - 26035267
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaaaat 151  Q
    ||||||||||||||||| |||||||||||||||    
T  26035299 ttaaaggacctttagatgcatttgacctaaaat 26035267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 27509904 - 27509848
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    ||||||| | || ||||||||||||||  |||||||||| |||||||||| ||||||    
T  27509904 acttgttcgagacttttgaaacttaaagaacttgtttgggacttttgaaacttaaag 27509848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 28078402 - 28078354
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  28078402 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 28078354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 6785305 - 6785380
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||| |||||||    
T  6785305 ctaaaaggacttgtttgggacttttgaaacttaaaagacttgtttgagacttttgaaacttaaaggaccactttga 6785380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 12626570 - 12626496
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  12626570 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttg 12626496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 1915558 - 1915624
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  1915558 acttgtttgggactttggaaacttaaaggacttgtttggaacttttgaaacttaaaggacgactttg 1915624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 29050206 - 29050133
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| |||||||||||| |||||||||||||| ||||| ||||| |||||||||| ||||||||| |||||    
T  29050206 ctaaaaggacttgtttgggacttttgaaacttaaaggacttttttgggacttttgaaacttaaaggaccacttt 29050133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 8178456 - 8178524
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaa-gacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  8178456 ctaaaaggacttgtttgagatttttgaaacttaaaaggacttgtttgggacttttgaaacttaaaggac 8178524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 16193244 - 16193177
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaa-gacttgtttggaacttttgaaatttaaagga 94  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  16193244 ctaaaaggacttgtttgggaattttgaaacttaaaaggacttgtttgggacttttgaaacttaaagga 16193177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 17942972 - 17942898
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||||    
T  17942972 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaatgaccactttg 17942898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 6503644 - 6503578
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||  | |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  6503644 acttgtttgaaacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttg 6503578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 12613036 - 12613094
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||    
T  12613036 acttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaagga 12613094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 26231139 - 26231212
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||| || ||||||||||| ||||||||||||| || | |||||| ||||||||| |||||    
T  26231139 ctaaaaggacttgtttgagaattttgaaacttcaaagacttgtttgaaattcttgaaacttaaaggaccacttt 26231212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 30378950 - 30378877
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| |||||||||||| | ||||||||||||  |||||||||| |||||||||| ||||| ||| ||||||    
T  30378950 taaaaggacttgtttgggactgttgaaacttaaagaacttgtttgggacttttgaaacttaaaagaccactttg 30378877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 17428269 - 17428222
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  17428269 aaactaaaaggacttgtttggaacttttgaaatttaaaggaccacttt 17428222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 3259014 - 3259088
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || ||||||||||||||  | |||||||  |||||||||| ||||||||| ||||||    
T  3259014 ctaaaaggacttgtttgagacttttgaaacttaaagtatttgtttgagacttttgaaacttaaaggaccactttg 3259088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 12612968 - 12612927
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  12612968 aaactaaaaagacttgtttgggacttttgaaatttaaaggac 12612927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 3258804 - 3258756
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||||||||||||||| |||||||||| ||||||||| ||||||    
T  3258804 aaactaaaaagacttgtttgggacttttgaaacttaaaggaccactttg 3258756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 9382663 - 9382711
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| |||||||||||||||||||||| ||||||||| ||||||    
T  9382663 aaactaaaaggacttgtttggaacttttgaaacttaaaggaccactttg 9382711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 1077168 - 1077093
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| |||||||   || |||| ||| ||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  1077168 ctaaaaggacttgttcatgactttttaaatttaaaggacttgtttgggacttttgaaacttaaaggaccactttga 1077093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 3408123 - 3408077
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttgg 74  Q
    ||||||| | |||||||||| |||||||||||||| |||||||||||    
T  3408123 ctaaaaggatttgtttgggacttttgaaacttaaatgacttgtttgg 3408077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 26393216 - 26393290
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||    ||||| |||||||||| ||||||||| ||||||    
T  26393216 ctaaaaggacttgtttgagacttttgaaacttaaaggatcactttgggacttttgaaacttaaaggacgactttg 26393290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 6503655 - 6503614
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  6503655 aaactaaaaagacttgtttgaaacttttgaaacttaaaggac 6503614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 10256163 - 10256098
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||  ||||||||||||||   |||||||| || |||||||| ||||||||| |||||    
T  10256163 acttgtttggggcttttgaaacttaaagagcttgtttgaaatttttgaaacttaaaggaccacttt 10256098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 148
Target Start/End: Complemental strand, 26392942 - 26392913
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaa 148  Q
    ||||||||||||||||||||||||||||||    
T  26392942 ttaaaggacctttagatacatttgacctaa 26392913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 12626780 - 12626828
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  12626780 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 12626828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 17943180 - 17943228
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  17943180 aaactaaaatgacttgtttgggacttttgaaacttaaaggaccactttg 17943228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 29050416 - 29050464
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  29050416 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 29050464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 30379225 - 30379253
Alignment:
Q  119 ttaaaggacctttagatacatttgaccta 147  Q
    |||||||||||||||||||||||||||||    
T  30379225 ttaaaggacctttagatacatttgaccta 30379253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 29739642 - 29739561
Alignment:
Q  21 tcatcctctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||  |||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||    
T  29739642 tcatcctttaaaatgacttgtttgggacttttgaaatttaaaggacttgtttggaacttttgaaacttaaaggactactttg 29739561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 35600329 - 35600402
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  35600329 ctaaaaggacttgtttgagacttttgaaacttaaaagacttgtttgggacttttgaaacttaaaggaccacttt 35600402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 31793826 - 31793902
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||||||    
T  31793826 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaagaccactttgag 31793902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 45723698 - 45723774
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||| |||||| | |||||||||    
T  45723698 ctaaaagaacttctttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaagaataactttgag 45723774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 42979545 - 42979620
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| ||||||||| || |||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||    
T  42979545 ctaaaaggacttgtttgagacttttgaaacttaaaggacttatttggaacttttgaaacttaaaggacgactttga 42979620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 30798575 - 30798649
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| | |||||||||||||||||||||||  |||||||||| ||||||||| ||||||    
T  30798575 ctaaaaggacttgtttgggactattgaaacttaaaagacttgtttgagacttttgaaacttaaaggaccactttg 30798649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 221222 - 221157
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||| |||||||||||||| || |||||||| |||||||||| |||||||||||||||    
T  221222 acttgtttgggacttttgaaacttaaaggaattgtttgggacttttgaaagttaaaggacaacttt 221157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 39033986 - 39033919
Alignment:
Q  38 ttgtttgggatttttgaaacttaaaag-acttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    |||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||||| ||||||||    
T  39033986 ttgtttgggacttttgaaacttaaaagaacttgtttgggacttttgaaacttaaaggacgactttgag 39033919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 44800617 - 44800692
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||||||||||||| || |||||||||||||| || |||||||| |||||||||| ||||| ||| |||||||    
T  44800617 ctaaaagaacttgtttgagacttttgaaacttaaatgatttgtttgggacttttgaaacttaaatgaccactttga 44800692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 18353078 - 18353004
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||  ||||| |||| ||||| ||| ||||||    
T  18353078 ctaaaagaacttgtttgggacttttgaaacttaaaggacttgtttgagactttcgaaacttaaatgaccactttg 18353004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 27364554 - 27364620
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| || |||||||||||||||||||||||||  |||||||||| ||||||||| ||||||    
T  27364554 acttgtttgtgacttttgaaacttaaaagacttgtttgagacttttgaaacttaaaggaccactttg 27364620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 44544343 - 44544269
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||| ||||||| |||||||||| ||||||||| ||||||    
T  44544343 ctaaaaggacttgtttgagacttttgaaacttaaaggacctgtttgggacttttgaaacttaaaggacgactttg 44544269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 47219079 - 47219005
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| || ||||||| ||||||| | ||||||    
T  47219079 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacgtttgaaacttaaaggtcgactttg 47219005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 11476763 - 11476836
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| |||||||||||| |||||||||||||| ||||| ||||| |||||| ||| ||||||||| |||||    
T  11476763 ctaaaaggacttgtttgggacttttgaaacttaaaggacttttttgggacttttaaaacttaaaggaccacttt 11476836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 8162919 - 8162994
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| |||||||||  | ||||||||||||||||||||||||||  ||||||||| ||||| ||| |||||||    
T  8162919 ctaaaaggacttgtttgcaacttttgaaacttaaaagacttgtttggggcttttgaaacttaaaagaccactttga 8162994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 11050476 - 11050535
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||||||||  ||||||||||||| ||||||||||| |||||||||| |||||||||    
T  11050476 acttgtttgggacatttgaaacttaaaggacttgtttgggacttttgaaacttaaaggac 11050535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 38427777 - 38427836
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||||| || |||||||||||||| |||||||||| ||||||||||| |||||||||    
T  38427777 acttgtttgagacttttgaaacttaaatgacttgtttgaaacttttgaaacttaaaggac 38427836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 2960792 - 2960865
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||| || |||||||||||||| || |||||| | |||||||||| ||||||||| |||||    
T  2960792 ctaaaaggacttgtttgagacttttgaaacttaaaggaattgtttaggacttttgaaacttaaaggaccacttt 2960865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 4923138 - 4923093
Alignment:
Q  40 gtttgggatttttgaaacttaaaagacttgtttggaacttttgaaa 85  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||    
T  4923138 gtttgggacttttgaaacttaaatgacttgtttggaacttttgaaa 4923093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 37394206 - 37394278
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| ||||||||| || |||| ||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  37394206 taaaaggacttgtttgagactttt-aaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttg 37394278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 7335986 - 7335931
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||||| |||||||||||||| ||||||||||  |||||||||| |||||    
T  7335986 acttgtttgggacttttgaaacttaaatgacttgtttgagacttttgaaacttaaa 7335931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 1469700 - 1469774
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| |||   || || |||||||||| ||||||||| ||||||    
T  1469700 ctaaaaggacttgtttgggacttttgaaacttaaaggaccacttcgggacttttgaaacttaaaggacgactttg 1469774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 43968466 - 43968540
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| |||   ||||| |||||||| | ||||||||| ||||||    
T  43968466 ctaaaaggacttgtttgggacttttgaaacttaaaggaccactttgggacttttgacacttaaaggacgactttg 43968540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 44800404 - 44800366
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagac 66  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  44800404 ctaaaagaacttgtttgagatttttgaaacttaaaagac 44800366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 47281341 - 47281407
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||| |||||||||||||| |||||| |||  | |||||||| ||||||||| ||||||    
T  47281341 acttgtttgggacttttgaaacttaaaggacttgattgagatttttgaaacttaaaggaccactttg 47281407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 48628731 - 48628665
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| || ||||||||||||||  |||||||||  |||||||||| ||||||||| ||||||    
T  48628731 acttgtttgagacttttgaaacttaaagaacttgtttgagacttttgaaacttaaaggacgactttg 48628665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 27773073 - 27773025
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| |||| ||||||||||||||||||||||||||| ||||||    
T  27773073 aaactaaaaggactagtttggaacttttgaaatttaaaggacgactttg 27773025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 39241832 - 39241884
Alignment:
Q  42 ttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    |||||| |||||||||||||| || |||||||| |||||||||| ||||||||    
T  39241832 ttgggacttttgaaacttaaaggatttgtttgggacttttgaaacttaaagga 39241884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 47294495 - 47294543
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||||||||||||||| |||||||||| ||||||||| ||||||    
T  47294495 aaactaaaaagacttgtttgggacttttgaaacttaaaggacgactttg 47294543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 2960637 - 2960587
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  2960637 aaactaaaatgacttgtttgggacttttgaaacttaaaggaccactttgag 2960587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 7336206 - 7336240
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaa 62  Q
    |||||||||||||||||| ||||||||||||||||    
T  7336206 ctaaaagaacttgtttggaatttttgaaacttaaa 7336240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 23842242 - 23842192
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||| ||| ||||||||| |||||||||||| ||||||||| ||||||||    
T  23842242 aaactaaaatgacttgttttgaacttttgaaacttaaaggaccactttgag 23842192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 22132830 - 22132793
Alignment:
Q  64 gacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  22132830 gacttgtttggagcttttgaaatttaaaggaccacttt 22132793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 29248279 - 29248238
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||    
T  29248279 aaactaaaaggacttgtttgggacttttgaaatttaaaggac 29248238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 33884262 - 33884213
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| |||||||    
T  33884262 aaactaaaaggacttgtttggtacttttgaaacttaaaggacgactttga 33884213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 39033965 - 39033932
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaa 62  Q
    ||||||||||||||||||| ||||||||||||||    
T  39033965 taaaagaacttgtttgggacttttgaaacttaaa 39033932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 40521321 - 40521358
Alignment:
Q  64 gacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  40521321 gacttgtttggagcttttgaaatttaaaggaccacttt 40521358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 47119928 - 47119879
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| |||||||    
T  47119928 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 47119879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 47219289 - 47219338
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| |||||||    
T  47219289 aaactaaaatgacttgtttgggacttttgaaacttaaaggacgactttga 47219338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 11050258 - 11050210
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  11050258 aaactgaaaggacttgtttgggacttttgaaacttaaaggaccactttg 11050210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 11476489 - 11476457
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaaaat 151  Q
    ||||||||||||||||| |||||||||||||||    
T  11476489 ttaaaggacctttagatgcatttgacctaaaat 11476457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 11476553 - 11476505
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  11476553 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 11476505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 30876403 - 30876451
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  30876403 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 30876451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 31684131 - 31684083
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  31684131 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 31684083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 31684338 - 31684386
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  31684338 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 31684386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 34378605 - 34378557
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| || |||||||| |||||||||||||||||||| ||||||    
T  34378605 aaactaaaaggatttgtttgggacttttgaaatttaaaggacgactttg 34378557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 37393995 - 37393947
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  37393995 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 37393947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 42888812 - 42888764
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  42888812 aaactaaaatgacttgtttgggacttttgaaacttaaaggacgactttg 42888764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 43968463 - 43968511
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  43968463 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 43968511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 47271907 - 47271851
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    ||||||||| || |||||||||||||| |||||| |||  |||||||||| ||||||    
T  47271907 acttgtttgagacttttgaaacttaaaggacttgcttgagacttttgaaacttaaag 47271851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 47294288 - 47294240
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  47294288 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 47294240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 13029 - 12953
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||  |||||||||| ||||||||| ||||||||    
T  13029 ctaaaaggacttgtttgggacttgtgaaacttaaaagacttgtttgagacttttgaaacttaaaggaccactttgag 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 59815 - 59891
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||  |||||||||| ||||||||| ||||||||    
T  59815 ctaaaaggacttgtttgggacttgtgaaacttaaaagacttgtttgagacttttgaaacttaaaggaccactttgag 59891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 9e-19; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 48149432 - 48149360
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||| ||| |||||    
T  48149432 taaaagaacttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaatgactacttt 48149360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 50542562 - 50542635
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||||||||||||| |  ||||||||||| ||||||||||  |||||||||||||||||||| ||||||    
T  50542562 taaaagaacttgtttgggactgctgaaacttaaaggacttgtttgagacttttgaaatttaaaggaccactttg 50542635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 44490144 - 44490068
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||||    
T  44490144 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaggacgactttgag 44490068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 1425287 - 1425350
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||||||||| ||| |||||    
T  1425287 ctaaaagaacttatttgggatttttgaaacttaaaggatttgtttggaacttttaaaacttaaa 1425350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 17847302 - 17847369
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| |||||||||| | |||||||||||||| ||||||||||| |||||||||| |||||||||    
T  17847302 ctaaaaggacttgtttggaacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggac 17847369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 17847334 - 17847405
Alignment:
Q  31 aaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||| |||||||||||| |||||||||||||| ||||||||||| ||||||||||  |||||||| ||||||    
T  17847334 aaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacctaaaggaccactttg 17847405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 33807995 - 33808062
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    |||||||||| | |||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  33807995 acttgtttggaacttttgaaacttaaaggacttgtttgggacttttgaaaattaaaggacgactttga 33808062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 42273734 - 42273667
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  42273734 ctaaaaggacttgtttgggacttttgaaacttaaaggacttgtttgggacttttaaaacttaaaggac 42273667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 8882220 - 8882294
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||  ||||||||| ||||||    
T  8882220 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaagcttaaaggaccactttg 8882294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 12196412 - 12196338
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||    
T  12196412 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgtgacttttgaaacttaaaggacgactttg 12196338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 17993224 - 17993298
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| |||||||||||||| |||   |||||||||||||||| ||||||||| ||||||    
T  17993224 ctaaaaggacttgtttgggacttttgaaacttaaaggacgactttggaacttttgaaacttaaaggacgactttg 17993298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 19496352 - 19496426
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| ||| ||||||| |||||||||| ||||||||| ||||||    
T  19496352 ctaaaaggacttgtttgagacttttgaaacttaaaggacctgtttgggacttttgaaacttaaaggacgactttg 19496426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 31208682 - 31208608
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||  | |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  31208682 ctaaaaggacttgtttgatacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttg 31208608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 32118648 - 32118574
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| | ||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  32118648 ctaaaaggatttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggaccactttg 32118574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 23552988 - 23552923
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||||| || ||||||||||||||  ||||||||||||||||||||| ||||||||| |||||    
T  23552988 acttgtttgagacttttgaaacttaaagaacttgtttggaacttttgaaacttaaaggaccacttt 23552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 31590997 - 31590937
Alignment:
Q  42 ttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| |||||||||||||| || ||||||||||||||||||| ||||||||| ||||||    
T  31590997 ttgggacttttgaaacttaaaggatttgtttggaacttttgaaacttaaaggacgactttg 31590937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 28812493 - 28812568
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| ||||||||| || ||||||||||||||  |||||||||| |||||||||| ||||| ||| |||||||    
T  28812493 ctaaaaggacttgtttgagacttttgaaacttaaagtacttgtttgggacttttgaaacttaaatgaccactttga 28812568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 22298452 - 22298387
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    ||||||| ||||||| |||| |||||||||||||| ||||||||||| |||||||||| ||||||||    
T  22298452 ctaaaaggacttgtt-gggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaagga 22298387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 10588514 - 10588442
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| ||||||||| || ||||||||||||||| |||||||||| | |||||||| ||||||||| |||||    
T  10588514 ctaaaaggacttgtttgagacttttgaaacttaaaa-acttgtttgggatttttgaaacttaaaggaccacttt 10588442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 20534313 - 20534386
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| ||||||||| || |||||||||||||| || |||||||  |||||||||| ||||||||| ||||||    
T  20534313 taaaaggacttgtttgagacttttgaaacttaaaggaattgtttgagacttttgaaacttaaaggaccactttg 20534386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 14564730 - 14564654
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| ||||||||| || |||| ||||||||| |||   |||||||||||||||| ||||||||| ||||||||    
T  14564730 ctaaaaggacttgtttgagacttttaaaacttaaaggaccactttggaacttttgaaacttaaaggaccactttgag 14564654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 37381780 - 37381717
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    ||||||| |||||||| ||| |||||||||||||| ||||||||||  |||||||||| |||||    
T  37381780 ctaaaaggacttgttttggacttttgaaacttaaaggacttgtttgagacttttgaaaattaaa 37381717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 39995374 - 39995441
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| | |||||||||| |||||||||||||| || ||| |||| |||||||||| |||||||||    
T  39995374 ctaaaaggatttgtttgggacttttgaaacttaaaggatttgattgggacttttgaaacttaaaggac 39995441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 15984944 - 15984887
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaa 85  Q
    ||||||| |||||||||||| |||||||||||||| | |||| |||| ||||||||||    
T  15984944 ctaaaaggacttgtttgggacttttgaaacttaaagggcttgattgggacttttgaaa 15984887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 33693555 - 33693616
Alignment:
Q  42 ttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    |||||| ||||||||||||||  ||||| |||| |||||||||| ||||||||| |||||||    
T  33693555 ttgggacttttgaaacttaaagaacttgcttgggacttttgaaacttaaaggaccactttga 33693616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 33807984 - 33808025
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  33807984 aaacttaaatgacttgtttggaacttttgaaacttaaaggac 33808025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 9339333 - 9339400
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| ||||||||| || |||||||||||||| |||   | |||||||||||||| |||||||||    
T  9339333 ctaaaaggacttgtttgagacttttgaaacttaaaggacgactgtggaacttttgaaacttaaaggac 9339400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 25730166 - 25730099
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||||| || |||||||||||||| ||||||||||  |||||||||| ||| ||||  |||||||    
T  25730166 acttgtttgagacttttgaaacttaaaggacttgtttgagacttttgaaacttagaggatgactttga 25730099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 31617642 - 31617717
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| |||||||||  | |||||||||||||| ||||||| ||  |||||||||| |||||| || |||||||    
T  31617642 ctaaaaggacttgtttgaaacttttgaaacttaaaggacttgtatgagacttttgaaacttaaagaacgactttga 31617717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 28159947 - 28159913
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaa 62  Q
    ||||||||||||||||| |||||||||||||||||    
T  28159947 ctaaaagaacttgtttgagatttttgaaacttaaa 28159913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 28160160 - 28160206
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttgg 74  Q
    ||||||| ||||||||| || |||||||||||||| |||||||||||    
T  28160160 ctaaaaggacttgtttgagacttttgaaacttaaaggacttgtttgg 28160206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 48707937 - 48707987
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  48707937 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttgag 48707987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 11795151 - 11795102
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| |||||||    
T  11795151 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 15985154 - 15985203
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| |||||||    
T  15985154 aaactaaaaggacttgtttgggacttttgaaacttaaaggaccactttga 15985203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 17847299 - 17847340
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||| ||| |||||||||||||||||||||| |||||||||    
T  17847299 aaactaaaaggacttgtttggaacttttgaaacttaaaggac 17847340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 33174224 - 33174273
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||| ||| ||||||||||  |||||||||||||||||||| |||||||    
T  33174224 aaactaaaaggacttgtttgagacttttgaaatttaaaggacgactttga 33174273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 33693320 - 33693283
Alignment:
Q  64 gacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  33693320 gacttatttggaacttttgaaatttaaaggaccacttt 33693283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 51371286 - 51371356
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    |||||| |||||||||| | ||||||||||||   ||||||||||  |||||||||||||||| ||| |||||    
T  51371286 taaaaggacttgtttggaacttttgaaacttag--gacttgtttgagacttttgaaatttaaatgaccacttt 51371356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 8433798 - 8433762
Alignment:
Q  26 ctctaaaagaacttgtttgggatttttgaaacttaaa 62  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  8433798 ctctaaaaggacttgtttgagatttttgaaacttaaa 8433762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 17993221 - 17993269
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  17993221 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 17993269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 19496443 - 19496475
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaaaat 151  Q
    ||||||||||||||||| |||||||||||||||    
T  19496443 ttaaaggacctttagatgcatttgacctaaaat 19496475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 22298363 - 22298331
Alignment:
Q  119 ttaaaggacctttagatacatttgacctaaaat 151  Q
    ||||||||||||||||| |||||||||||||||    
T  22298363 ttaaaggacctttagatgcatttgacctaaaat 22298331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 26017360 - 26017312
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  26017360 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 26017312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 28264787 - 28264835
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  28264787 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 28264835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 31973735 - 31973775
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaagga 94  Q
    ||||| ||| |||||||||||||||||||||| ||||||||    
T  31973735 aaactaaaaggacttgtttggaacttttgaaacttaaagga 31973775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 35929974 - 35929910
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    ||||||| ||||||||| || |||||||||||||| |||   ||||| |||||||||| ||||||    
T  35929974 ctaaaaggacttgtttgagacttttgaaacttaaaggaccactttgggacttttgaaacttaaag 35929910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 44490463 - 44490511
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  44490463 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 44490511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 49118755 - 49118803
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  49118755 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 49118803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 4e-18; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 35443245 - 35443170
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaa-gacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  35443245 ctaaaaggacttgtttgggacttttgaaacttaaaaggacttgtttgggacttttgaaacttaaaggaccactttg 35443170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 15847065 - 15846998
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaag-acttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| || |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  15847065 acttgtttgagacttttgaaacttaaaaggacttgtttggaacttttgaaacttaaaggaccactttg 15846998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 513242 - 513168
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||| || |||||||||| |||||||||||||| || |||||||| |||||||||| ||||||||| ||||||    
T  513242 ctaaaataatttgtttgggacttttgaaacttaaaggatttgtttggtacttttgaaacttaaaggacgactttg 513168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 39295358 - 39295432
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| |||| ||||||| |||||||||||||| ||||||||||| |||||||||| |||||| || ||||||    
T  39295358 ctaaaaggacttatttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaagaaccactttg 39295432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 1293419 - 1293356
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||  |||||||||| ||||||    
T  1293419 taaaaggacttgtttgtgatttttgaaacttaaaggacttgtttgagacttttgaaacttaaag 1293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 4649076 - 4649021
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||    
T  4649076 acttgtttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 4649021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 9884790 - 9884723
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||  |||||||||| |||||||||    
T  9884790 ctaaaaggacttgtttgagacttttgaaacttaaatgacttgtttgagacttttgaaacttaaaggac 9884723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 38107026 - 38106971
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||||    
T  38107026 acttgtttgggacttttgaaacttaaaagacttgtttgaaacttttaaaacttaaa 38106971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 38633919 - 38633986
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||| ||| |||||||    
T  38633919 acttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaagaccactttga 38633986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 43806748 - 43806803
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||    
T  43806748 acttgtttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaa 43806803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 9056580 - 9056648
Alignment:
Q  35 aacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    |||||||||| || ||||||||||||||||| |||||||  |||||||||| ||||||||  |||||||    
T  9056580 aacttgtttgagacttttgaaacttaaaagatttgtttgagacttttgaaacttaaaggatgactttga 9056648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 27428432 - 27428496
Alignment:
Q  31 aaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    |||| |||||||||| | |||||||| ||||||||||| ||||| |||||||||| |||||||||    
T  27428432 aaaggacttgtttggaacttttgaaatttaaaagacttatttgggacttttgaaacttaaaggac 27428496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 39513546 - 39513610
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaag 92  Q
    ||||||| |||||||||| | ||||||||||||||  |||||||||| |||||||||| ||||||    
T  39513546 ctaaaaggacttgtttggaacttttgaaacttaaagaacttgtttgggacttttgaaacttaaag 39513610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 3875882 - 3875839
Alignment:
Q  19 catcatcctctaaaagaacttgtttgggatttttgaaacttaaa 62  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  3875882 catcatcctctaaaaggacttgtttgagatttttgaaacttaaa 3875839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 42988441 - 42988508
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||||| || |||||||||||| |  |||||||||| ||||||||||||||||| || |||||||    
T  42988441 acttgtttgagacttttgaaacttagagaacttgtttgggacttttgaaatttaaagaacgactttga 42988508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 23972504 - 23972580
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||||||||||||| || |||||||||||||| |||   ||||  |||||||||| ||||||||| | ||||||    
T  23972504 ctaaaagaacttgtttgagacttttgaaacttaaatgaccactttgagacttttgaaacttaaaggacgagtttgag 23972580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 440984 - 441031
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||| ||| ||||||||||| |||||||||| |||||||||||||||    
T  440984 aaactaaaaggacttgtttgggacttttgaaacttaaaggacaacttt 441031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 9056553 - 9056607
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    |||||||||||| ||||||||||||||| |||||||||  |||||||||| |||||    
T  9056553 acttgtttgggacttttgaaacttaaaa-acttgtttgagacttttgaaacttaaa 9056607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 38208686 - 38208611
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttga 103  Q
    ||||||| |||||| || || |||||||| |||||||||   ||| |||||||||||| ||||||||| |||||||    
T  38208686 ctaaaaggacttgtctgagacttttgaaatttaaaagaccactttagaacttttgaaacttaaaggacgactttga 38208611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 259952 - 259867
Alignment:
Q  19 catcatcctctaaaagaacttgtttgggatttttgaaa--cttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||||||||||||||||||||  |   || |||  || ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  259952 catcatcctctaaaagaacttgtttgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 259867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 440774 - 440700
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||| ||||||||| |||   |||||||||||||||| ||||| ||| ||||||    
T  440774 ctaaaaggacttgtttgagacttttaaaacttaaaggaccactttggaacttttgaaacttaaatgacgactttg 440700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 655969 - 656054
Alignment:
Q  19 catcatcctctaaaagaacttgtttgggatttttgaaa--cttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||||||||||||||||||||  |   || |||  || ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  655969 catcatcctctaaaagaacttgtttgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 656054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 841704 - 841789
Alignment:
Q  19 catcatcctctaaaagaacttgtttgggatttttgaaa--cttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||||||||||||||||||||  |   || |||  || ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  841704 catcatcctctaaaagaacttgtttgaaacgattcaaaaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 841789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 2533198 - 2533132
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||| ||| |||||||||||||| |||   ||||| |||||||||| ||||||||| ||||||    
T  2533198 acttgtttaggacttttgaaacttaaaggacgactttgggacttttgaaacttaaaggacgactttg 2533132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 24430565 - 24430527
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagac 66  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  24430565 ctaaaaggacttgttttggatttttgaaacttaaaagac 24430527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 24430778 - 24430852
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagac-ttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| |||||||||||| ||||||||||||||  || |||||||  |||||||||| |||||| || |||||    
T  24430778 ctaaaaggacttgtttgggacttttgaaacttaaagaactttgtttgagacttttgaaacttaaagaaccacttt 24430852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 41536521 - 41536483
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagac 66  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  41536521 ctaaaaggacttgtttgggacttttgaaacttaaaagac 41536483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 27428430 - 27428463
Alignment:
Q  58 ttaaaagacttgtttggaacttttgaaatttaaa 91  Q
    ||||| ||||||||||||||||||||||||||||    
T  27428430 ttaaaggacttgtttggaacttttgaaatttaaa 27428463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 28707661 - 28707725
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||||| || |||||||||||||| |||||| ||||||||||| ||| |||||| || |||||    
T  28707661 acttgtttgagacttttgaaacttaaaggacttg-ttggaacttttaaaacttaaagaactacttt 28707725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 3876052 - 3876100
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  3876052 aaactaaaatgacttgtttgggacttttgaaacttaaaggacgactttg 3876100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 12010696 - 12010744
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  12010696 aaactaaaatgacttgtttgggacttttgaaacttaaaggaccactttg 12010744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 22683985 - 22683937
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  22683985 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 22683937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 22684192 - 22684240
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  22684192 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 22684240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 36400067 - 36400019
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  36400067 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 36400019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 37933579 - 37933531
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  37933579 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 37933531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 101216 - 101282
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  101216 acttgtttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttg 101282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 5109 - 5044
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||||| || ||||||||||||||  ||||||||||||||||||||| ||||||||| |||||    
T  5109 acttgtttgagacttttgaaacttaaagaacttgtttggaacttttgaaacttaaaggaccacttt 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 47896 - 47823
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaacttt 101  Q
    ||||||| | |||||||||| |||||||||||||| || ||||||| ||||||||||| ||||||||| |||||    
T  47896 ctaaaaggatttgtttgggacttttgaaacttaaaggatttgtttgaaacttttgaaacttaaaggaccacttt 47823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 5242 - 5308
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||||||||| ||||| ||| ||||||    
T  5242 acttgtttgagatttttgaaacttaaatgacttgtttgagacttttgaaacttaaaagaccactttg 5308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 252645 - 252721
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||||| ||||||||| || |||| ||||||||| |||   |||||||||||||||| ||||||||| ||||||||    
T  252645 ctaaaaggacttgtttgagacttttaaaacttaaaggaccactttggaacttttgaaacttaaaggaccactttgag 252721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 11299 - 11225
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||||| ||||||||| || |||||||||||||| || |||||||| ||||||| ||  |||||||| ||||||    
T  11299 ctaaaaggacttgtttgagacttttgaaacttaaaggatttgtttgggacttttgtaacctaaaggaccactttg 11225  T

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Target: scaffold1986 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 40 - 2
Alignment:
Q  36 acttgtttgggatttttgaaacttaaaagacttgtttgg 74  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  40 acttgtttgggacttttgaaacttaaaggacttgtttgg 2  T

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Target: scaffold1986; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 51 - 10
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggac 95  Q
    ||||||||| ||||||||||| |||||||||| |||||||||    
T  51 aaacttaaatgacttgtttgggacttttgaaacttaaaggac 10  T

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Target: scaffold0542 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 1987 - 1949
Alignment:
Q  28 ctaaaagaacttgtttgggatttttgaaacttaaaagac 66  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  1987 ctaaaagaacttgtttggaacttttgaaacttaaaagac 1949  T

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Target: scaffold0117 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 14586 - 14536
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttgag 104  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||||| ||||||    
T  14586 aaactaaaaggacttgtttgggacttttgaaacttaaaggacaattttgag 14536  T

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Target: scaffold1562 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 707 - 760
Alignment:
Q  49 ttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||||| ||||||||||  |||||||||| | ||||||| ||||||    
T  707 ttttgaaacttaaaggacttgtttgagacttttgaaactaaaaggaccactttg 760  T

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Target: scaffold1158 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 1886 - 1833
Alignment:
Q  49 ttttgaaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    |||||||||||||| ||||||||||  |||||||||| | ||||||| ||||||    
T  1886 ttttgaaacttaaaggacttgtttgagacttttgaaactaaaaggaccactttg 1833  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 219034 - 219071
Alignment:
Q  29 taaaagaacttgtttgggatttttgaaacttaaaagac 66  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  219034 taaaaggacttgtttgggacttttgaaacttaaaagac 219071  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 5744 - 5792
Alignment:
Q  54 aaacttaaaagacttgtttggaacttttgaaatttaaaggacaactttg 102  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||| ||||||    
T  5744 aaactaaaaggacttgtttgggacttttgaaacttaaaggacgactttg 5792  T

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