View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12142_high_17 (Length: 260)

Name: NF12142_high_17
Description: NF12142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12142_high_17
NF12142_high_17
[»] chr2 (31 HSPs)
chr2 (1-249)||(16646417-16646657)
chr2 (3-82)||(37317049-37317128)
chr2 (3-82)||(41575735-41575814)
chr2 (3-79)||(22718357-22718433)
chr2 (3-82)||(6729914-6729993)
chr2 (3-82)||(20682815-20682894)
chr2 (4-82)||(7601208-7601286)
chr2 (4-82)||(8373608-8373686)
chr2 (4-77)||(16125899-16125972)
chr2 (4-84)||(38963969-38964049)
chr2 (4-76)||(45036537-45036609)
chr2 (4-82)||(2831882-2831960)
chr2 (4-82)||(40471910-40471988)
chr2 (4-82)||(42754166-42754244)
chr2 (4-77)||(16333653-16333726)
chr2 (4-82)||(5096422-5096500)
chr2 (4-82)||(10333389-10333467)
chr2 (4-82)||(41319735-41319813)
chr2 (4-52)||(12209163-12209211)
chr2 (4-76)||(18504646-18504718)
chr2 (4-78)||(4137583-4137657)
chr2 (4-82)||(20917738-20917816)
chr2 (4-82)||(25627197-25627275)
chr2 (4-82)||(31603228-31603306)
chr2 (4-82)||(41437006-41437084)
chr2 (4-81)||(7724422-7724499)
chr2 (4-69)||(44022442-44022507)
chr2 (4-80)||(16127594-16127670)
chr2 (4-52)||(26436528-26436576)
chr2 (4-52)||(37987777-37987825)
chr2 (4-80)||(43328615-43328690)
[»] chr4 (39 HSPs)
chr4 (3-82)||(39376679-39376758)
chr4 (3-82)||(44210322-44210401)
chr4 (3-82)||(28988205-28988284)
chr4 (3-80)||(1377981-1378058)
chr4 (3-80)||(24334191-24334268)
chr4 (3-84)||(31657166-31657247)
chr4 (3-82)||(28898882-28898961)
chr4 (3-81)||(51306046-51306124)
chr4 (3-82)||(23605713-23605792)
chr4 (4-82)||(6520609-6520687)
chr4 (4-82)||(29821224-29821302)
chr4 (4-82)||(37164191-37164269)
chr4 (4-77)||(47833960-47834033)
chr4 (3-82)||(1981192-1981271)
chr4 (4-82)||(2805982-2806060)
chr4 (4-82)||(50685094-50685172)
chr4 (3-82)||(42185447-42185526)
chr4 (4-82)||(24505685-24505763)
chr4 (4-82)||(28914542-28914620)
chr4 (4-82)||(31152835-31152913)
chr4 (4-82)||(39332641-39332719)
chr4 (4-82)||(40411419-40411497)
chr4 (4-82)||(48380930-48381008)
chr4 (4-82)||(48652646-48652724)
chr4 (5-66)||(21045048-21045109)
chr4 (4-85)||(55631683-55631764)
chr4 (4-52)||(1615713-1615761)
chr4 (4-52)||(11260876-11260924)
chr4 (4-52)||(48079889-48079937)
chr4 (3-82)||(28909651-28909730)
chr4 (7-82)||(46608391-46608466)
chr4 (4-82)||(3708427-3708505)
chr4 (4-82)||(4271825-4271903)
chr4 (4-82)||(17492841-17492919)
chr4 (4-82)||(39171132-39171210)
chr4 (4-82)||(39260526-39260604)
chr4 (4-82)||(43447339-43447417)
chr4 (4-61)||(1613050-1613107)
chr4 (4-52)||(51716705-51716753)
[»] chr3 (37 HSPs)
chr3 (3-82)||(49818930-49819009)
chr3 (3-82)||(29809517-29809596)
chr3 (3-64)||(36364588-36364649)
chr3 (3-82)||(2643077-2643156)
chr3 (3-82)||(4945658-4945737)
chr3 (3-82)||(28958806-28958885)
chr3 (7-82)||(34680359-34680434)
chr3 (3-80)||(4228997-4229074)
chr3 (3-82)||(4465054-4465133)
chr3 (3-82)||(26759651-26759730)
chr3 (3-82)||(1778534-1778612)
chr3 (4-82)||(10106191-10106269)
chr3 (4-78)||(36594229-36594303)
chr3 (3-82)||(32961419-32961498)
chr3 (3-82)||(52093901-52093980)
chr3 (4-82)||(9997687-9997765)
chr3 (4-82)||(10228536-10228614)
chr3 (4-82)||(10232292-10232370)
chr3 (4-78)||(18013281-18013355)
chr3 (4-82)||(29588549-29588627)
chr3 (4-82)||(33462879-33462957)
chr3 (4-82)||(14750867-14750945)
chr3 (4-75)||(43394373-43394444)
chr3 (4-82)||(29720569-29720647)
chr3 (4-82)||(34263511-34263589)
chr3 (4-82)||(42098434-42098512)
chr3 (4-85)||(16434661-16434742)
chr3 (4-85)||(29793182-29793263)
chr3 (4-68)||(1334119-1334183)
chr3 (4-35)||(53055479-53055510)
chr3 (4-82)||(900895-900973)
chr3 (4-82)||(12948214-12948292)
chr3 (4-82)||(29455515-29455593)
chr3 (4-82)||(46866517-46866595)
chr3 (4-82)||(53274802-53274880)
chr3 (4-52)||(31440469-31440517)
chr3 (4-40)||(49220646-49220682)
[»] chr5 (38 HSPs)
chr5 (3-80)||(10465109-10465186)
chr5 (3-82)||(27675713-27675792)
chr5 (3-80)||(40080154-40080231)
chr5 (3-82)||(41042649-41042728)
chr5 (3-82)||(34170002-34170081)
chr5 (4-75)||(6734956-6735027)
chr5 (4-82)||(1831238-1831316)
chr5 (4-82)||(40316705-40316783)
chr5 (4-82)||(41410758-41410836)
chr5 (3-59)||(14140091-14140147)
chr5 (4-76)||(33402409-33402481)
chr5 (6-81)||(27674393-27674468)
chr5 (4-82)||(9936700-9936778)
chr5 (4-82)||(26801913-26801991)
chr5 (4-82)||(26809463-26809541)
chr5 (4-82)||(26824490-26824568)
chr5 (5-82)||(967369-967446)
chr5 (7-75)||(2799809-2799877)
chr5 (7-75)||(2805975-2806043)
chr5 (6-82)||(31190989-31191065)
chr5 (4-75)||(30788379-30788450)
chr5 (4-81)||(13548387-13548464)
chr5 (4-81)||(40796885-40796962)
chr5 (3-75)||(39925377-39925449)
chr5 (4-74)||(1918650-1918720)
chr5 (4-82)||(14607370-14607448)
chr5 (4-82)||(19344511-19344589)
chr5 (4-82)||(20023034-20023112)
chr5 (4-82)||(20040227-20040305)
chr5 (4-82)||(30721497-30721575)
chr5 (4-42)||(39035734-39035772)
chr5 (4-81)||(14355673-14355750)
chr5 (4-64)||(1831524-1831584)
chr5 (4-52)||(14639557-14639605)
chr5 (4-52)||(32110484-32110532)
chr5 (4-52)||(32473865-32473913)
chr5 (4-52)||(39104121-39104169)
chr5 (4-64)||(40316991-40317051)
[»] chr8 (36 HSPs)
chr8 (3-82)||(11756951-11757030)
chr8 (3-82)||(37094305-37094384)
chr8 (3-78)||(43049082-43049157)
chr8 (3-82)||(44362094-44362173)
chr8 (3-81)||(4960324-4960402)
chr8 (3-80)||(18419171-18419248)
chr8 (3-82)||(14583730-14583809)
chr8 (3-82)||(25866242-25866321)
chr8 (4-82)||(8496695-8496773)
chr8 (11-82)||(11538870-11538941)
chr8 (4-82)||(27302036-27302114)
chr8 (4-82)||(38036667-38036745)
chr8 (4-85)||(32909229-32909310)
chr8 (4-82)||(21132737-21132815)
chr8 (4-82)||(28583111-28583189)
chr8 (4-82)||(29616135-29616213)
chr8 (4-82)||(30464606-30464684)
chr8 (4-82)||(38842337-38842415)
chr8 (4-82)||(44887524-44887602)
chr8 (4-52)||(17523977-17524025)
chr8 (4-80)||(44039999-44040075)
chr8 (4-82)||(67269-67347)
chr8 (4-82)||(761724-761802)
chr8 (4-82)||(4326928-4327006)
chr8 (4-82)||(14378496-14378574)
chr8 (6-82)||(1645215-1645291)
chr8 (3-75)||(44871504-44871576)
chr8 (4-82)||(23437622-23437700)
chr8 (4-78)||(23547242-23547316)
chr8 (4-62)||(29708735-29708793)
chr8 (16-82)||(44947191-44947257)
chr8 (4-85)||(40645856-40645937)
chr8 (4-40)||(2026746-2026782)
chr8 (4-52)||(14512014-14512062)
chr8 (3-35)||(40035460-40035492)
chr8 (4-52)||(44717469-44717517)
[»] chr1 (41 HSPs)
chr1 (3-82)||(8048564-8048643)
chr1 (3-82)||(28490333-28490412)
chr1 (3-82)||(41855538-41855616)
chr1 (3-80)||(41414376-41414453)
chr1 (3-82)||(23393405-23393484)
chr1 (3-82)||(44240692-44240771)
chr1 (3-82)||(48389240-48389319)
chr1 (3-62)||(4489234-4489293)
chr1 (3-82)||(9334554-9334633)
chr1 (3-82)||(9358327-9358406)
chr1 (4-85)||(23337980-23338061)
chr1 (6-78)||(29253613-29253686)
chr1 (7-84)||(48613895-48613972)
chr1 (3-78)||(31931999-31932074)
chr1 (3-82)||(50014377-50014456)
chr1 (4-82)||(1821445-1821523)
chr1 (4-82)||(31651717-31651795)
chr1 (4-80)||(43452983-43453059)
chr1 (4-82)||(5117250-5117328)
chr1 (4-82)||(7075146-7075224)
chr1 (4-82)||(10124283-10124361)
chr1 (4-80)||(40883584-40883660)
chr1 (4-82)||(5606207-5606285)
chr1 (4-78)||(26476829-26476903)
chr1 (4-82)||(26544042-26544120)
chr1 (4-62)||(36035860-36035918)
chr1 (4-82)||(38786762-38786840)
chr1 (4-82)||(44741517-44741595)
chr1 (4-82)||(44963488-44963566)
chr1 (4-82)||(45299493-45299571)
chr1 (6-75)||(12685752-12685821)
chr1 (4-64)||(2138863-2138923)
chr1 (4-75)||(44452370-44452441)
chr1 (4-82)||(8250659-8250737)
chr1 (4-82)||(10100329-10100407)
chr1 (4-42)||(33730053-33730091)
chr1 (4-85)||(49903499-49903580)
chr1 (4-52)||(3138766-3138814)
chr1 (4-80)||(10648017-10648092)
chr1 (4-52)||(47912455-47912503)
chr1 (4-52)||(48312202-48312250)
[»] chr6 (18 HSPs)
chr6 (3-82)||(32673921-32674000)
chr6 (4-82)||(24825339-24825417)
chr6 (4-82)||(2397944-2398022)
chr6 (3-81)||(24949845-24949923)
chr6 (4-82)||(35117450-35117528)
chr6 (5-82)||(33347953-33348030)
chr6 (4-52)||(4889972-4890020)
chr6 (4-82)||(995737-995815)
chr6 (4-82)||(6142323-6142401)
chr6 (4-82)||(10105985-10106063)
chr6 (4-82)||(16969553-16969631)
chr6 (4-82)||(29514843-29514921)
chr6 (4-80)||(17496146-17496222)
chr6 (4-82)||(2141742-2141820)
chr6 (4-82)||(2667141-2667219)
chr6 (5-78)||(24798366-24798439)
chr6 (4-81)||(31948460-31948536)
chr6 (4-52)||(2656516-2656564)
[»] chr7 (29 HSPs)
chr7 (3-82)||(32972147-32972226)
chr7 (3-80)||(19327488-19327565)
chr7 (4-85)||(25571501-25571582)
chr7 (3-82)||(38259653-38259732)
chr7 (4-82)||(5842292-5842370)
chr7 (4-85)||(28016585-28016665)
chr7 (4-85)||(35693639-35693720)
chr7 (4-80)||(48448692-48448768)
chr7 (4-74)||(9173156-9173226)
chr7 (4-82)||(29247801-29247879)
chr7 (4-82)||(32345595-32345673)
chr7 (4-82)||(41007769-41007847)
chr7 (4-82)||(16806958-16807036)
chr7 (4-82)||(18756763-18756840)
chr7 (3-81)||(38353411-38353489)
chr7 (5-82)||(26651060-26651137)
chr7 (7-68)||(31496473-31496534)
chr7 (4-81)||(38069225-38069302)
chr7 (4-80)||(3123960-3124036)
chr7 (4-42)||(33376948-33376986)
chr7 (4-82)||(36820050-36820128)
chr7 (4-78)||(38441987-38442061)
chr7 (17-82)||(40232414-40232479)
chr7 (4-40)||(19817509-19817545)
chr7 (4-52)||(25273859-25273907)
chr7 (4-80)||(30462035-30462111)
chr7 (4-36)||(38850876-38850908)
chr7 (4-80)||(41844944-41845020)
chr7 (4-52)||(47713274-47713322)
[»] scaffold0281 (1 HSPs)
scaffold0281 (3-82)||(13278-13357)
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-82)||(489-570)
[»] scaffold1248 (1 HSPs)
scaffold1248 (4-75)||(1275-1346)
[»] scaffold0952 (1 HSPs)
scaffold0952 (4-75)||(967-1038)
[»] scaffold0195 (1 HSPs)
scaffold0195 (4-82)||(57-135)
[»] scaffold0172 (1 HSPs)
scaffold0172 (4-82)||(19547-19625)
[»] scaffold0289 (1 HSPs)
scaffold0289 (4-75)||(9297-9368)
[»] scaffold0221 (1 HSPs)
scaffold0221 (4-82)||(5550-5628)
[»] scaffold0001 (1 HSPs)
scaffold0001 (4-82)||(184140-184218)
[»] scaffold0283 (1 HSPs)
scaffold0283 (16-82)||(3169-3235)


Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 16646417 - 16646657
Alignment:
Q  1 atcatattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaagtgacggatggagtat 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        || |||||||    
T  16646417 atcatattattcaagatatttaagcttaaaattatgcattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg--------gaaggagtat 16646508  T
Q  101 tgaataacatggatataaggcatatgtagccaaatatagtagttgctaacaagaccagcttacttgcattacaagtaagtatgttaaaccaaaattatgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16646509 tgaataacatggatataaggcatatgtagccaaatatagtagttgctaacaagaccagcttacttgcattacaagtaagtatgttaaaccaaaattatgt 16646608  T
Q  201 ttaatcttcatttatgctattctcgtcttccttattcatgtcagcctat 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16646609 ttaatcttcatttatgctattctcgtcttccttattcatgtcagcctat 16646657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 37317049 - 37317128
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  37317049 catattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacg 37317128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 41575735 - 41575814
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  41575735 catattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatgcagtcaactgtatcatatattaagggacg 41575814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 22718433 - 22718357
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggg 79  Q
    |||||||||||||||||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  22718433 catattattcaagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgtatcatgtattaaggg 22718357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 6729993 - 6729914
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||    
T  6729993 catattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaagtgtgtcatgtattaagggacg 6729914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 20682815 - 20682894
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  20682815 catattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacg 20682894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 7601286 - 7601208
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||  |||||||||| ||| |||||||||||||    
T  7601286 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtattaagggacg 7601208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 8373608 - 8373686
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| |||||||||| ||||||| || |||||| | ||||||||| |||  ||||||||||||    
T  8373608 atattattcaagatatttaaacttaaaattacacattgatatacgtaattgggtcaactgtgtcacttattaagggacg 8373686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 16125972 - 16125899
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaag 77  Q
    ||||||||||||||||||||| | |||||||| |||||| |||||||||   ||||||||| ||||||||||||    
T  16125972 atattattcaagatatttaaggtcaaaattatgcattgatatgcgtaattaggtcaactgtctcatgtattaag 16125899  T

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Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 38963969 - 38964049
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaa 84  Q
    |||||||||||||||||||| || ||||||| ||||||  ||||||||| ||||||||||| |||  |||||||| |||||    
T  38963969 atattattcaagatatttaaactcaaaattacacattggtatgcgtaattgagtcaactgtgtcacttattaaggaacgaa 38964049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 45036537 - 45036609
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaa 76  Q
    |||||||| ||||||||||| ||||||||||| |||||  || |||||| | |||||||||||||||||||||    
T  45036537 atattatttaagatatttaaacttaaaattatgcattggtatacgtaatagggtcaactgtatcatgtattaa 45036609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 2831882 - 2831960
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||| | |||||||||   ||||||||| ||| |||||| ||||||    
T  2831882 atattattcaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaactgtgtcaagtattatgggacg 2831960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 40471910 - 40471988
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||| ||||||||||||    
T  40471910 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttattaagggacg 40471988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 42754244 - 42754166
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || ||||||| ||||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  42754244 atattattcaagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 42754166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 16333653 - 16333726
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaag 77  Q
    ||||||||||||||||||||| | |||||||| |||||  |||||||||   ||||||||| ||||||||||||    
T  16333653 atattattcaagatatttaaggtcaaaattatgcattggtatgcgtaattaggtcaactgtctcatgtattaag 16333726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 5096422 - 5096500
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| || |||||||| |||  ||||||||||||    
T  5096422 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcacttattaagggacg 5096500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 10333467 - 10333389
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  10333467 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaatcgggtcaactgtgtcacttattaagggacg 10333389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 41319813 - 41319735
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  41319813 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 41319735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 12209163 - 12209211
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||||||||||||||| || ||||||||||||||  |||||||||    
T  12209163 atattattcaagatatttaaactcaaaattatacattggtatgcgtaat 12209211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 18504646 - 18504718
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaa 76  Q
    |||||||||||||||||||||||  ||||||| |||||| || ||||||   ||||||| ||||| |||||||    
T  18504646 atattattcaagatatttaagctcgaaattatgcattgacatacgtaataaggtcaactatatcaagtattaa 18504718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 4137583 - 4137657
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||    
T  4137583 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagg 4137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 20917816 - 20917738
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||| ||||||||| |  ||||||   |||| ||||||||||||    
T  20917816 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactaggtcatttattaagggacg 20917738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 25627197 - 25627275
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| ||||||||||| |||||||| |||||  |||| ||||   ||||||| | ||| |||||||||||||    
T  25627197 atattattcaatatatttaagctcaaaattatgcattgtcatgcataataaggtcaactatgtcaagtattaagggacg 25627275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 31603306 - 31603228
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  |||| |||| | ||||||||| |||  ||||||||||||    
T  31603306 atattattcaagatatttaaactcaaaattacgcattggtatgcctaattgggtcaactgtgtcacttattaagggacg 31603228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 41437006 - 41437084
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||  | ||||||||| |||  ||||||||||||    
T  41437006 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacg 41437084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 7724499 - 7724422
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    |||||||||||||||||||| |  |||||||  |||||  ||||||||| | ||||||||| |||  |||||||||||    
T  7724499 atattattcaagatatttaaacccaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggac 7724422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 44022442 - 44022507
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcat 69  Q
    ||||||||||| ||||||||| | |||||||| |||||| |||||||||   ||||||||| ||||    
T  44022442 atattattcaatatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgtgtcat 44022507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 16127670 - 16127594
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||| |||||||||||| |  ||||||| |||||  |||||||||   ||||| ||| |||||||||||||||    
T  16127670 atattatttaagatatttaaggtccaaattatgcattggcatgcgtaattaggtcaattgtgtcatgtattaaggga 16127594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 26436576 - 26436528
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||||||||||||||| || ||| |||| |||||| |||||||||    
T  26436576 atattattcaagatatttaaactcaaagttatgcattgacatgcgtaat 26436528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 37987825 - 37987777
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||||||||||||||| || ||||||| ||||| | |||||||||    
T  37987825 atattattcaagatatttaaactcaaaattacacattaatatgcgtaat 37987777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 43328690 - 43328615
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    ||||||||||| ||||||||||| |||||||| |||||  |||||||||   ||||| ||| ||| |||||||||||    
T  43328690 atattattcaaaatatttaagctaaaaattatgcattg-gatgcgtaataaggtcaattgtgtcaagtattaaggga 43328615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 39376758 - 39376679
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  39376758 catattattcaagatatttaagctcaaaatcatgcattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 39376679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 44210322 - 44210401
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  44210322 catattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaaccgtatcatgtattaagggacg 44210401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 28988284 - 28988205
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  28988284 catattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacg 28988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 1377981 - 1378058
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  1377981 catattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaaggga 1378058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 24334268 - 24334191
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  24334268 catattattcaagatatgtaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatgtattaaggga 24334191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 31657247 - 31657166
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaa 84  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||||||||||| ||||||||||||||    
T  31657247 catattattcaagatatttaagctcaaaattatgcattgaaatgcgtaaatgagtcaactgtatcatttattaagggacgaa 31657166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 28898961 - 28898882
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  28898961 catattattcaagatatttaagctcaaaattatgcattggaatgcataatggagtcaactgtatcatatattaagggacg 28898882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 51306124 - 51306046
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  51306124 catattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggac 51306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 23605792 - 23605713
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||    
T  23605792 catattattcaagatatttaagttcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaaaggacg 23605713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 6520609 - 6520687
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||| | |||| ||||||||||||    
T  6520609 atattattcaagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactttgtcatttattaagggacg 6520687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 29821224 - 29821302
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||| | ||||||||| |||||||||| ||||||    
T  29821224 atattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacg 29821302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 37164191 - 37164269
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||| | ||||||||| |||||||||| ||||||    
T  37164191 atattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacg 37164269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 47834033 - 47833960
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaag 77  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||  |||||||||| ||| ||||||||    
T  47834033 atattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaagtcaactgtgtcaagtattaag 47833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 1981271 - 1981192
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| || |||||||| |||||| ||||||||  | ||||||| |||||||||||| ||||||    
T  1981271 catattattcaagatatttaaactcaaaattatgcattgacatgcgtaagagggtcaactttatcatgtattatgggacg 1981192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 2806060 - 2805982
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| |||| |||||| |||||||||   ||||||||| ||| |||||||||||||    
T  2806060 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacg 2805982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 50685094 - 50685172
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| ||||||||| | ||||||||||||||  ||||||||| | ||||||||| ||| |||||| ||||||    
T  50685094 atattattcaaaatatttaagttcaaaattatacattggtatgcgtaatagggtcaactgtgtcaagtattatgggacg 50685172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 42185447 - 42185526
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||| |||||||||||||| |||||||| ||||  |||  |||||   |||||||||||||||||||| ||||||    
T  42185447 catattatttaagatatttaagctcaaaattatgcatttgaataggtaatatggtcaactgtatcatgtattatgggacg 42185526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 24505685 - 24505763
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| ||||  ||||| |||||||||   ||||||| | ||| |||||||||||||    
T  24505685 atattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtattaagggacg 24505763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 28914542 - 28914620
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  28914542 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 28914620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 31152835 - 31152913
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| |||||||| || ||||||| ||||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  31152835 atattattcaatatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 31152913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 39332719 - 39332641
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  39332719 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 39332641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 40411497 - 40411419
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||  | |||||||||||||  ||||||||||||    
T  40411497 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtatcacttattaagggacg 40411419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 48380930 - 48381008
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  48380930 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 48381008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 48652646 - 48652724
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || ||||||| ||||||  || |||||| | ||||||||| |||  ||||||||||||    
T  48652646 atattattcaagatatttaaactcaaaattacacattggtatccgtaattgggtcaactgtgtcacttattaagggacg 48652724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 21045109 - 21045048
Alignment:
Q  5 tattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtat 66  Q
    |||||||||| ||||| ||||| ||||||||  ||||| ||||||||| |||||||||||||    
T  21045109 tattattcaaaatattcaagctcaaaattatgtattgacatgcgtaatagagtcaactgtat 21045048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 55631764 - 55631683
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    |||||||||||||||||||| || |||||||  |||||  || |||||| | ||||||||| |||  |||||||||||||||    
T  55631764 atattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaagggacgaag 55631683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 1615713 - 1615761
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||    
T  1615713 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaat 1615761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 11260876 - 11260924
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||||||||  |||||||| |||||| |||||||||    
T  11260876 atattattcaagatatttaagcacaaaattatgcattgacatgcgtaat 11260924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 48079937 - 48079889
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||| |||||||||||||| ||| ||||||||||| |||||||||    
T  48079937 atattattgaagatatttaagctcaaagttatacattgacatgcgtaat 48079889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 28909730 - 28909651
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||| ||||||||||| ||||||||||||||  || ||||||    ||||||||  ||||||||| ||||||    
T  28909730 catattattcaaaatatttaagctcaaaattatacattggcatacgtaatatgatcaactgtgacatgtattatgggacg 28909651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 46608391 - 46608466
Alignment:
Q  7 ttattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  46608391 ttattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 46608466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 3708427 - 3708505
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | || |||||| |||  ||||||||||||    
T  3708427 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggttaactgtgtcacttattaagggacg 3708505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 4271903 - 4271825
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||| |||||||||||||||||| ||| |||| |||||  |||||||||   ||||||||| ||| |||||| ||||||    
T  4271903 atataattcaagatatttaagctcaaagttatgcattggcatgcgtaataaggtcaactgtgtcaagtattatgggacg 4271825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 17492841 - 17492919
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| |||| |||||| ||| |||||   || |||||| ||| |||||||| ||||    
T  17492841 atattattcaagatatttaagctcaaagttatgcattgatatgtgtaataaggttaactgtgtcaagtattaagagacg 17492919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 39171132 - 39171210
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || ||||| |  |||||  |||||||||   |||||||||||||  ||||||||||||    
T  39171132 atattattcaagatatttaaactcaaaatcacgcattggtatgcgtaattaggtcaactgtatcacttattaagggacg 39171210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 39260526 - 39260604
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||  | |||||||| |||||| |||||||||    |||| ||| ||| |||||||||||||    
T  39260526 atattattcaagatatttaaattcaaaattatgcattgacatgcgtaataagatcaattgtgtcaagtattaagggacg 39260604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 43447339 - 43447417
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||  | ||||||||| |||  ||||||||||||    
T  43447339 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacg 43447417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 1613107 - 1613050
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaac 61  Q
    |||||||||||||||||||| || ||||||||  ||||| ||||||||| | ||||||    
T  1613107 atattattcaagatatttaaactcaaaattatgtattgacatgcgtaatagggtcaac 1613050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 51716705 - 51716753
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||| ||||||||||| |||||||| |||||| |||| ||||    
T  51716705 atattattcaaaatatttaagctcaaaattatgcattgacatgcataat 51716753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 49818930 - 49819009
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  49818930 catattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaagggacg 49819009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 29809517 - 29809596
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||    
T  29809517 catattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagttaactgtgtcatgtattaagggacg 29809596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 36364649 - 36364588
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgt 64  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36364649 catattattcaagatatttaagctcaaaattatacattgaaatgcgtaatggagtcaactgt 36364588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 2643156 - 2643077
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||| | |||||||||||||||||    
T  2643156 catattattcaagatatttaagctcaaaattatgcattggcatgcgtaatggagtcaactatgtcatgtattaagggacg 2643077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 4945737 - 4945658
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||| |||||||||| ||| |||||||||||||||||    
T  4945737 catattattcaagatatttaagctcaaaattatgcattggaatgcgtgatggagtcaattgtgtcatgtattaagggacg 4945658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 28958885 - 28958806
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| || |||||||| |||| |||||||||||||||| |||||| |||||||||||||||||    
T  28958885 catattattcaagatatttaaactcaaaattatgcattaaaatgcgtaatggagttaactgtgtcatgtattaagggacg 28958806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 34680359 - 34680434
Alignment:
Q  7 ttattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||    
T  34680359 ttattcaagatatttaagctcaaaattatacattggaatacgtaatagagtcaactgtgtcatgtattaagggacg 34680434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 4229074 - 4228997
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    ||||||||||||||||||||| || |||||||| ||||| ||||||||||||||||||| || |||||||||||||||    
T  4229074 catattattcaagatatttaaactcaaaattatgcattggaatgcgtaatggagtcaaccgtgtcatgtattaaggga 4228997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 4465054 - 4465133
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| |||||| |||| |||||| |||||    
T  4465054 catattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagttaactgtgtcatatattaaaggacg 4465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 26759651 - 26759730
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| || ||||||||| |||||||||| |||| ||||||||||| ||||||||||| |||||    
T  26759651 catattattcaagatatttaaactcaaaattatatattgaaatgcataatagagtcaactgtgtcatgtattaaaggacg 26759730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 1778534 - 1778612
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||| |||||||||||||||||| ||||||| |||||||||    
T  1778534 catattatttaagatatttaagctcaaaattatgcattggaatacgtaatggagtcaactgtgtcatgta-taagggacg 1778612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 10106269 - 10106191
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| |||| |||||| |||||||||  |||||||||| ||| |||||||||||||    
T  10106269 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtattaagggacg 10106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 36594303 - 36594229
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||   ||||||||| ||| |||||||||    
T  36594303 atattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagg 36594229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 32961419 - 32961498
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||| |||||||| || |||||||| |||||| ||||||||| | |||||||||||| | ||||| ||||||    
T  32961419 catattattcaaaatatttaaactcaaaattatgcattgacatgcgtaatagggtcaactgtatcgtatattatgggacg 32961498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 52093980 - 52093901
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||| ||||||||||||| |||||||| ||||   ||||||||| |||||||| || |||||||||| ||||||    
T  52093980 catattattcgagatatttaagctcaaaattatgcattagcatgcgtaatagagtcaaccgtgtcatgtattatgggacg 52093901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 9997765 - 9997687
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| |||| |||||| |||||||||   ||||||||| ||| |||||||||||||    
T  9997765 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacg 9997687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 10228614 - 10228536
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| |||| |||||| |||||||||   ||||||||| ||| |||||||||||||    
T  10228614 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacg 10228536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 10232370 - 10232292
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| |||| |||||| |||||||||  |||||||||| ||| ||||||| |||||    
T  10232370 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtattaaaggacg 10232292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 18013355 - 18013281
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    |||||||||||||||||||||||  ||||||| ||||   ||||||||| |  ||||||||||||||||||||||    
T  18013355 atattattcaagatatttaagctctaaattatgcatttgtatgcgtaattggatcaactgtatcatgtattaagg 18013281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 29588549 - 29588627
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| ||||   || | |||| ||||||||||| |||||||||| ||||||    
T  29588549 atattattcaagatatttaagctcaaaattatgcattagtatacataatagagtcaactgtgtcatgtattatgggacg 29588627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 33462879 - 33462957
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||||  |||| |||| | |||||||||  ||||||||| ||||||    
T  33462879 atattattcaagatatttaagctcaaaattatgcattggcatgcataatagggtcaactgtggcatgtattatgggacg 33462957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 14750945 - 14750867
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaa-tggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  |||||||| |||| |||||||| |||||||||||||||||    
T  14750945 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaactgga-tcaactgtgtcatgtattaagggacg 14750867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 43394444 - 43394373
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    ||||||||||||||||||||||| |||||||| |||||  |||||| || | ||| ||||| ||||||||||    
T  43394444 atattattcaagatatttaagctcaaaattatccattggcatgcgtgatagggtccactgtgtcatgtatta 43394373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 29720569 - 29720647
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  29720569 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 29720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 34263589 - 34263511
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| |  ||||||||||||  ||||||||||||    
T  34263589 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtatcacttattaagggacg 34263511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 42098512 - 42098434
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  42098512 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 42098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 16434742 - 16434661
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    |||||||||||||||||||| || |||||||  |||||  || |||||| | ||||||||| |||  |||||||||||||||    
T  16434742 atattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaagggacgaag 16434661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 29793263 - 29793182
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    |||||||| ||||||||||| || |||||||| |||||  ||||||||| | || |||||| |||  |||||||||||||||    
T  29793263 atattatttaagatatttaaactcaaaattatgcattggtatgcgtaattgggttaactgtgtcacttattaagggacgaag 29793182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 1334183 - 1334119
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatca 68  Q
    |||||||| |||||||||||||| |||||||| |||||| ||| |||||   |||||||||||||    
T  1334183 atattatttaagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtatca 1334119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 35
Target Start/End: Complemental strand, 53055510 - 53055479
Alignment:
Q  4 atattattcaagatatttaagcttaaaattat 35  Q
    ||||||||||||||||||||||||||||||||    
T  53055510 atattattcaagatatttaagcttaaaattat 53055479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 900973 - 900895
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  |||||||||   ||||||||| |||  ||||||||||||    
T  900973 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaatttggtcaactgtgtcacttattaagggacg 900895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 12948214 - 12948292
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||| |||||  ||||||||| |  |||||||| |||  ||||||| ||||    
T  12948214 atattattcaagatatttaaactcaaaattatgcattggtatgcgtaattggatcaactgtgtcacttattaagagacg 12948292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 29455593 - 29455515
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||  | ||||||||| |||  ||||||||||||    
T  29455593 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacg 29455515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 46866517 - 46866595
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| |||||||| || |||||||  |||||  ||||||||| | ||||| |||||||  ||||||||||||    
T  46866517 atattattcaaaatatttaaactcaaaattacgcattggtatgcgtaattgggtcaattgtatcacttattaagggacg 46866595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 53274880 - 53274802
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | |||||||  ||||  ||||||||||||    
T  53274880 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactagatcacttattaagggacg 53274802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 31440517 - 31440469
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||||||||||||||||||  ||||||| |||||| | |||||||    
T  31440517 atattattcaagatatttaagctctaaattatgcattgacacgcgtaat 31440469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 49220646 - 49220682
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacatt 40  Q
    |||||||||||||||||||| || |||||||||||||    
T  49220646 atattattcaagatatttaacctcaaaattatacatt 49220682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 10465186 - 10465109
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  10465186 catattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaaggga 10465109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 27675713 - 27675792
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  27675713 catattatttaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacg 27675792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 40080154 - 40080231
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||| ||||||||||    
T  40080154 catattattcaagatatttaagctcaaaattatacattggaatgcgtaatagagtcaactgtgtcatttattaaggga 40080231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 41042728 - 41042649
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||| |||| |||||||||||||||||    
T  41042728 catattattcaatatatttaagctcaaaattatgcattgaaatacgtaatggagtcagctgtgtcatgtattaagggacg 41042649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 34170002 - 34170081
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||| ||| ||||||||||| |||||||||||||  |||||||||| ||||||||||| |||||||||||||||||    
T  34170002 catattatccaaaatatttaagctcaaaattatacattagaatgcgtaattgagtcaactgtgtcatgtattaagggacg 34170081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 6734956 - 6735027
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    ||||||||||||||||||||||| |||||||||||||||  | |||||| | ||||||||||||||||||||    
T  6734956 atattattcaagatatttaagctcaaaattatacattgatgtacgtaatagggtcaactgtatcatgtatta 6735027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 1831238 - 1831316
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||  |||||||||  ||| |||||||||||||    
T  1831238 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacg 1831316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 40316705 - 40316783
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||  |||||||||  ||| |||||||||||||    
T  40316705 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacg 40316783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 41410836 - 41410758
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||  |||||||||  ||| |||||||||||||    
T  41410836 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacg 41410758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 14140091 - 14140147
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtca 59  Q
    ||||||||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  14140091 catattattcaagatatttaaactcaaaattatgcattggaatgcgtaatggagtca 14140147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 33402481 - 33402409
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaa 76  Q
    |||||||||||||||||||| || ||||||| ||||||| ||||||||| | ||| ||||| |||||||||||    
T  33402481 atattattcaagatatttaaactcaaaattacacattgatatgcgtaattgggtctactgtgtcatgtattaa 33402409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 27674393 - 27674468
Alignment:
Q  6 attattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||   ||||||||| ||| ||||||||||||    
T  27674393 attattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggac 27674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 9936778 - 9936700
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||| ||||||||| | ||||||||| |||  ||||||||||||    
T  9936778 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacg 9936700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 26801991 - 26801913
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| |||| |||||| |||||||||   ||||||||| ||| |||||||||||||    
T  26801991 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacg 26801913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 26809541 - 26809463
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| |||| |||||| |||||||||   ||||||||| ||| |||||||||||||    
T  26809541 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacg 26809463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 26824568 - 26824490
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| |||| |||||| |||||||||   ||||||||| ||| |||||||||||||    
T  26824568 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacg 26824490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 967369 - 967446
Alignment:
Q  5 tattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| | |||||||| |||||  |||||||||  ||||||||||  ||||||||| ||||||    
T  967369 tattattcaagatatttaagttcaaaattatgcattggtatgcgtaataaagtcaactgtgccatgtattatgggacg 967446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 2799809 - 2799877
Alignment:
Q  7 ttattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    ||||||||||||||||| || ||| ||||||||||| |||||||||  |||||||||| ||| ||||||    
T  2799809 ttattcaagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtcaagtatta 2799877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 2805975 - 2806043
Alignment:
Q  7 ttattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    ||||||||||||||||| || ||| ||||||||||| |||||||||  |||||||||| ||| ||||||    
T  2805975 ttattcaagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtcaagtatta 2806043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 31191065 - 31190989
Alignment:
Q  6 attattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||| || |||||||  |||||  ||||||||| | |||||||||||||  ||||||||||||    
T  31191065 attattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaagggacg 31190989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 30788379 - 30788450
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||| ||   ||||||||| ||| ||||||    
T  30788379 atattattcaagatatttaagctcaaaattatgcattgacatgcgttataaggtcaactgtttcaagtatta 30788450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 13548387 - 13548464
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    |||||||||||||||||||| || |||||||   ||||| ||||||||| ||||||| ||| |||  |||||||||||    
T  13548387 atattattcaagatatttaaactcaaaattacgtattgatatgcgtaattgagtcaattgtgtcacttattaagggac 13548464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 40796962 - 40796885
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    |||||||||||| |||||||| | ||| |||| |||||| |||||||||   ||||||||| ||| ||||||||||||    
T  40796962 atattattcaaggtatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggac 40796885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 39925377 - 39925449
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    ||||||||||||||||||||| || |||||||| |||||| || |||||| | || |||| | ||||||||||    
T  39925377 catattattcaagatatttaaactcaaaattatgcattgacatacgtaatagggttaactttgtcatgtatta 39925449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 1918720 - 1918650
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatt 74  Q
    ||||||||||||||||||||| | |||||||| |||||  ||| |||||   |||||||||||| ||||||    
T  1918720 atattattcaagatatttaaggtcaaaattatgcattggcatgtgtaataaggtcaactgtatcctgtatt 1918650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 14607448 - 14607370
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  ||||   ||||||||| | ||||||||| |||  ||||||||||||    
T  14607448 atattattcaagatatttaaactcaaaattacgcattagtatgcgtaattgggtcaactgtgtcacttattaagggacg 14607370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 19344589 - 19344511
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| |||||||| || |||||||  |||||  ||||||||| | ||||||||| |||| ||||||| ||||    
T  19344589 atattattcaaaatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttattaagagacg 19344511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 20023034 - 20023112
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  |||| |||||||    
T  20023034 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattgagggacg 20023112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 20040305 - 20040227
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||  | |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  20040305 atattattcaagatatttaaattcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 20040227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 30721575 - 30721497
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || ||| |||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  30721575 atattattcaagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 30721497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 39035734 - 39035772
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattga 42  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  39035734 atattattcaagatatttaagctcaaaattattcattga 39035772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 14355673 - 14355750
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    |||||||| |||||||||||||| |||||||| ||| || |||||||||  ||| || ||| ||| |||||| |||||    
T  14355673 atattatttaagatatttaagctcaaaattatccatcgacatgcgtaataaagtgaattgtgtcaagtattatgggac 14355750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 1831524 - 1831584
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgt 64  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | |||||||||    
T  1831524 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgt 1831584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 14639605 - 14639557
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||||||||| ||| |||| |||||| || ||||||    
T  14639605 atattattcaagatatttaagctcaaagttatgcattgacatacgtaat 14639557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 32110532 - 32110484
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||| ||||| ||| |||| |||||| |||||||||    
T  32110532 atattattcaagatattgaagctcaaagttatgcattgagatgcgtaat 32110484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 32473913 - 32473865
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||||| ||| |||||||| |||| | |||||||||    
T  32473913 atattattcaagatatttacgctcaaaattatgcattaacatgcgtaat 32473865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 39104169 - 39104121
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||| ||||||||||| |||||||| |||||  |||||||||    
T  39104169 atattattcaatatatttaagctcaaaattatgcattggcatgcgtaat 39104121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 40316991 - 40317051
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgt 64  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | |||||||||    
T  40316991 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgt 40317051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 11756951 - 11757030
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  11756951 catattattcaagatattcaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacg 11757030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 37094305 - 37094384
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||    
T  37094305 catattattcaagatatttaagctcaaaattatgcattgaaatacgtaatggagtcaactgtgtcatttattaagggacg 37094384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 43049157 - 43049082
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| ||||||||    
T  43049157 catattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagg 43049082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 44362094 - 44362173
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| | |||||||||||||||||    
T  44362094 catattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactttgtcatgtattaagggacg 44362173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 4960324 - 4960402
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    |||||||||||||||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||||||||||||    
T  4960324 catattattcaagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgtattatgtattaagggac 4960402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 18419171 - 18419248
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    ||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  18419171 catattattcaagatatttaatctcaaaattatacattggaatgcataatggagtcaactgtgtcatgtattaaggga 18419248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 14583809 - 14583730
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||| |||||||||||||| |||||||| ||||| |||||||||| ||||||||| | |||||||||||||||||    
T  14583809 catattattaaagatatttaagctcaaaattatgcattggaatgcgtaatagagtcaactatgtcatgtattaagggacg 14583730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 25866242 - 25866321
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| ||||||||  |||| |||| ||||||||||||||||||| ||||||||| |||||    
T  25866242 catattattcaagatatttaagctcaaaattatgaattggaatgtgtaatggagtcaactgtattatgtattaaaggacg 25866321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 8496773 - 8496695
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||||| || |||||| | |||||||||||||||||||| ||||||    
T  8496773 atattattcaagatatttaagctcaaaattatgcattgatatacgtaatagggtcaactgtatcatgtattatgggacg 8496695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 11538870 - 11538941
Alignment:
Q  11 tcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||| |||||||| ||||| |||| ||||||||||||||| | |||||||||||||||||    
T  11538870 tcaagatatttaagctcaaaattatgcattggaatgtgtaatggagtcaactatgtcatgtattaagggacg 11538941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 27302036 - 27302114
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||| |||||| ||||||||| | ||||| |||||||||||||| ||||||    
T  27302036 atattattcaagatatttaaactcaaaattatgcattgacatgcgtaatagggtcaattgtatcatgtattatgggacg 27302114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 38036745 - 38036667
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||   ||||||||| ||| |||||||||||||    
T  38036745 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacg 38036667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 32909229 - 32909310
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||  | |||| ||| ||| ||||||||||||||||    
T  32909229 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaaatcaattgtgtcaagtattaagggacgaag 32909310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 21132815 - 21132737
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||| |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  21132815 atattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 21132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 28583189 - 28583111
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||  | ||||||||| |||||||||||||||||    
T  28583189 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaactgggtcaactgtgtcatgtattaagggacg 28583111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 29616213 - 29616135
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| ||| |  ||||||||| |  |||||||| |||||||||| ||||||    
T  29616213 atattattcaagatatttaagctcaaaattatgcatcggtatgcgtaataggatcaactgtgtcatgtattatgggacg 29616135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 30464606 - 30464684
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || ||||||| ||||||| |||||||||   ||||||||| |||  ||||||||||||    
T  30464606 atattattcaagatatttaaactcaaaattacacattgatatgcgtaatttggtcaactgtgtcacttattaagggacg 30464684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 38842337 - 38842415
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | |||||||||||||  ||||||||||||    
T  38842337 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaagggacg 38842415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 44887602 - 44887524
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||| ||| |||||||| |||||  ||||||||| | ||||||||| |||| ||||| ||||||    
T  44887602 atattattcaagatatttatgctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacg 44887524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 17523977 - 17524025
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||    
T  17523977 atattattcaagatatttaagctcaaaattatgcattgacatgcgtaat 17524025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 44039999 - 44040075
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||| || |||||||| |||||  ||||||||| | ||||||||| |||| ||||| ||||    
T  44039999 atattattcaagatatttaaactcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatggga 44040075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 67269 - 67347
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||   ||||||| | ||| |||||| ||||||    
T  67269 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactatgtcaagtattatgggacg 67347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 761724 - 761802
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  761724 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 761802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 4327006 - 4326928
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| |||||||| || ||||||| ||||||| ||||||||| | ||||||||| |||  ||||||| ||||    
T  4327006 atattattcaaaatatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtcacttattaagagacg 4326928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 14378574 - 14378496
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  14378574 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 14378496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 1645291 - 1645215
Alignment:
Q  6 attattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||   ||||  ||||||| |||||| ||||||    
T  1645291 attattcaagatatttaagctcaaacttatgcattgacatgcgtaataaggtcatatgtatcaagtattatgggacg 1645215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 44871504 - 44871576
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    |||||||||||| |||||||| || |||||||| |||||| |||  |||| | |||||||| |||||||||||    
T  44871504 catattattcaaaatatttaaactcaaaattatgcattgacatgtataatagggtcaactgcatcatgtatta 44871576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 23437700 - 23437622
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  |||||| || || |||||||| |||  ||||||||||||    
T  23437700 atattattcaagatatttaaactcaaaattacgcattggtatgcgtcattgaatcaactgtgtcacttattaagggacg 23437622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 23547242 - 23547316
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    |||||||||||||||||||| || |||||||  |||||  |||||||||  |||||||||| |||  ||||||||    
T  23547242 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaagtcaactgtgtcacttattaagg 23547316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 29708735 - 29708793
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaact 62  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| |||||||||    
T  29708735 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaact 29708793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 44947191 - 44947257
Alignment:
Q  16 atatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| |||||||| |||||  |||||||||   ||||||||| |||||||||| ||||||    
T  44947191 atatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacg 44947257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 40645856 - 40645937
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    |||||||||||||||||||||||  || |||| |||||| |||||||||   ||||| ||| | | |||||| |||||||||    
T  40645856 atattattcaagatatttaagctcgaagttatgcattgacatgcgtaataaggtcaattgtgttaagtattatgggacgaag 40645937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 2026746 - 2026782
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacatt 40  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  2026746 atattatttaagatatttaaacttaaaattatacatt 2026782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 14512014 - 14512062
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||| ||||    
T  14512014 atattattcaagatatttaagctcaaagttatgcattgacatgcataat 14512062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 40035460 - 40035492
Alignment:
Q  3 catattattcaagatatttaagcttaaaattat 35  Q
    |||||||||||||||||||||||| ||||||||    
T  40035460 catattattcaagatatttaagctgaaaattat 40035492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 44717469 - 44717517
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||||| |||||||||||| ||||||||  ||||| |||||||||    
T  44717469 atattattcatgatatttaagctcaaaattatgaattgacatgcgtaat 44717517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 8048643 - 8048564
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  8048643 catattattcaagatatttaagctcaaaaatatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacg 8048564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 28490333 - 28490412
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| || |||||||| |||||    
T  28490333 catattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcctgtattaaaggacg 28490412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 41855616 - 41855538
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  41855616 catattattcaagatatttaag-tcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacg 41855538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 41414376 - 41414453
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||| |||| ||||||||||    
T  41414376 catattattcaagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactgtgtcatatattaaggga 41414453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 23393405 - 23393484
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| |||||  ||||||||| ||||||||||| |||| ||||||||||||    
T  23393405 catattattcaagatatttaagctcaaaattatgcattggcatgcgtaattgagtcaactgtgtcatttattaagggacg 23393484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 44240692 - 44240771
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||| ||||| |||| ||||||||||||    
T  44240692 catattattcaatatatttaagctcaaaattatgcattgaaatgcgtaattgagtccactgtgtcatttattaagggacg 44240771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 48389240 - 48389319
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| ||||||||  || |||||||||||||||||||||||| |||| |||||| |||||    
T  48389240 catattattcaagatatttaagctcaaaattatgtatcgaaatgcgtaatggagtcaactgtgtcatttattaaaggacg 48389319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 4489234 - 4489293
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaact 62  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  4489234 catattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaact 4489293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 9334554 - 9334633
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||| ||||| ||||||||||| |||||||| || | |||||||||||| |||||||||| |||||||||||||||||    
T  9334554 catatttttcaaaatatttaagctcaaaattatgcagtaaaatgcgtaatgaagtcaactgtgtcatgtattaagggacg 9334633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 9358327 - 9358406
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||| ||||| ||||||||||| |||||||| || | |||||||||||| |||||||||| |||||||||||||||||    
T  9358327 catatttttcaaaatatttaagctcaaaattatgcagtaaaatgcgtaatgaagtcaactgtgtcatgtattaagggacg 9358406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 23337980 - 23338061
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    |||||||||||||||||||| || |||||||| |||||| |||||||||   |||||||||||||||||||| |||| ||||    
T  23337980 atattattcaagatatttaaactcaaaattatgcattgacatgcgtaatatggtcaactgtatcatgtattatgggatgaag 23338061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 29253613 - 29253686
Alignment:
Q  6 attattcaagatattt-aagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    |||||||||||||||| ||||| |||||||| |||| |||||||||||| |||||||||| |||||||||||||    
T  29253613 attattcaagatattttaagctcaaaattatgcattcaaatgcgtaatgaagtcaactgtgtcatgtattaagg 29253686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 48613972 - 48613895
Alignment:
Q  7 ttattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaa 84  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||   || |||||||||| |||||| ||||||||    
T  48613972 ttattcaagatatttaagctcaaaattatacattgacatgcgtaataaggttaactgtatcaagtattatgggacgaa 48613895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 31932074 - 31931999
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    |||||||||||||||||||||||| ||||||||  ||||  ||||||||| || |||||||| |||||||||||||    
T  31932074 catattattcaagatatttaagctcaaaattatgtattggcatgcgtaatagaatcaactgtgtcatgtattaagg 31931999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 50014456 - 50014377
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| || | |||||| ||||| |||  |||||||||||| |||| |||||||||||||||||    
T  50014456 catattattcaagatatttaaactcagaattatgcattggaatatgtaatggagtcacctgtgtcatgtattaagggacg 50014377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 1821523 - 1821445
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||||  || |||||| | ||||||||| |||||||||||| ||||    
T  1821523 atattattcaagatatttaagctcaaaattatgcattggtatacgtaattgggtcaactgtgtcatgtattaagagacg 1821445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 31651795 - 31651717
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||| | ||||||||| |||| ||||| ||||||    
T  31651795 atattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacg 31651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 43453059 - 43452983
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||| || |||||||| |||||| |||||||||   ||||||||| ||| |||||||||||    
T  43453059 atattattcaagatatttaaactcaaaattatgcattgatatgcgtaataaggtcaactgtgtcaagtattaaggga 43452983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 5117328 - 5117250
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||||    |||||||| ||| |||||||||||||    
T  5117328 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataagttcaactgtgtcaagtattaagggacg 5117250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 7075224 - 7075146
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||| ||||||||| | ||||||||| |||  ||||||||||||    
T  7075224 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacg 7075146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 10124283 - 10124361
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| |||||||| || |||||||  |||||| ||||||||| ||||||||||| |||  ||||||||||||    
T  10124283 atattattcaaaatatttaaactcaaaattacgcattgatatgcgtaattgagtcaactgtgtcacttattaagggacg 10124361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 40883584 - 40883660
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    ||||||||||||||||||||| | |||||||| |||| | ||||||||| |  |||||||| |||||||||| ||||    
T  40883584 atattattcaagatatttaagttcaaaattatgcattaatatgcgtaataggatcaactgtctcatgtattatggga 40883660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 5606285 - 5606207
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  5606285 atattattcaagatatttaaactcaaaattaagcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 5606207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 26476903 - 26476829
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    |||||||||||||||||||| || ||||||||  ||||| |||||||||   ||||||||| ||| |||||||||    
T  26476903 atattattcaagatatttaaactcaaaattatgtattgacatgcgtaataaggtcaactgtgtcaagtattaagg 26476829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 26544042 - 26544120
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||| ||||||||| | ||||||||| |||  |||||| |||||    
T  26544042 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaatcgggtcaactgtgtcacttattaaaggacg 26544120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 36035860 - 36035918
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaact 62  Q
    |||||||||||||||||||| |||||||||| ||||||  ||||||||| | |||||||    
T  36035860 atattattcaagatatttaaacttaaaattacacattggtatgcgtaattgggtcaact 36035918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 38786840 - 38786762
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||| ||||||||||| || ||||||||  ||||| ||||||||| | ||||| ||| |||||||||| ||||||    
T  38786840 atattattaaagatatttaaactcaaaattatgtattgatatgcgtaatagggtcaattgtgtcatgtattatgggacg 38786762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 44741517 - 44741595
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||| ||||||||| |  |||||||| |||  ||||||||||||    
T  44741517 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactgtgtcacttattaagggacg 44741595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 44963566 - 44963488
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| ||| ||||  ||||| |||||||||   ||||||| | ||| |||||||||||||    
T  44963566 atattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtattaagggacg 44963488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 45299493 - 45299571
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  45299493 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 45299571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 12685821 - 12685752
Alignment:
Q  6 attattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    ||||||||||||||||||||| |||||||| |||||| ||| |||||   ||||||||| ||| ||||||    
T  12685821 attattcaagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtgtcaagtatta 12685752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 2138923 - 2138863
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgt 64  Q
    |||||||||||||||||||| || ||||||| ||||||  ||||||||| | |||||||||    
T  2138923 atattattcaagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgt 2138863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 44452370 - 44452441
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    ||||||| ||||||||||||||| |||||||| |||| | |||||||||   ||||| ||| ||||||||||    
T  44452370 atattatccaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaattgtgtcatgtatta 44452441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 8250737 - 8250659
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||| |||||  || ||||||   ||||||||| |||  ||||||||||||    
T  8250737 atattattcaagatatttaaactcaaaattatgcattggtatacgtaattaggtcaactgtgtcacttattaagggacg 8250659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 10100407 - 10100329
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| |||||||| || |||||||  |||||| |||||||||   ||||||||| |||  ||||||||||||    
T  10100407 atattattcaaaatatttaaactcaaaattacgcattgatatgcgtaattaggtcaactgtgtcacttattaagggacg 10100329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 33730091 - 33730053
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattga 42  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  33730091 atattattcaagatatttaaacttaaaattatgcattga 33730053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 49903580 - 49903499
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    |||||||||||||||| |||||| ||||||||  |||   |||||||||  |||||||| |||||  ||||| |||||||||    
T  49903580 atattattcaagatatgtaagctcaaaattatgaatttgcatgcgtaataaagtcaactatatcaaatattatgggacgaag 49903499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 3138766 - 3138814
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||||||| ||||||||||  ||||| |||| ||||    
T  3138766 atattattcaagatatttaagtttaaaattatgtattgacatgcataat 3138814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 10648092 - 10648017
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||| || ||||||||||| | |||| ||||||   ||||||||| ||| |||||| ||||    
T  10648092 atattattcaagatatttaaactcaaaattataca-taaaatacgtaataaggtcaactgtgtcaagtattatggga 10648017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 47912455 - 47912503
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||| ||||||||||| |||||||| |||||| || ||||||    
T  47912455 atattattcaaaatatttaagctcaaaattatgcattgacatacgtaat 47912503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 48312202 - 48312250
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||| ||||||||||| |||||||| |||||| |||| ||||    
T  48312202 atattattcaaaatatttaagctcaaaattatgcattgacatgcataat 48312250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 32673921 - 32674000
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||| |||||| | |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||    
T  32673921 catattattcaagatgtttaaggtcaaaattatacgttggaatgtgtaatggagtcaactgtatcatgtattaagggacg 32674000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 24825339 - 24825417
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || ||||||| ||||||| ||||||||| |||||||||| ||||  ||||||||||||    
T  24825339 atattattcaagatatttaaactcaaaattacacattgatatgcgtaattgagtcaactggatcacttattaagggacg 24825417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 2397944 - 2398022
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| ||||||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  2397944 atattattcaagatatttaaacttaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 2398022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 24949845 - 24949923
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    |||||||||||||||||||||||| ||| |||| |||||| |||||||||   ||||| ||||||| |||||| |||||    
T  24949845 catattattcaagatatttaagctgaaagttatgcattgacatgcgtaataaggtcaattgtatcaagtattatgggac 24949923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 35117450 - 35117528
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||| ||||||||||||||| |||||||| ||||   ||||||||| | ||||||||| |||||||||||| ||||    
T  35117450 atattatccaagatatttaagctcaaaattatgcattagtatgcgtaattgggtcaactgtgtcatgtattaagtgacg 35117528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 33348030 - 33347953
Alignment:
Q  5 tattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||| |||||||||||| || |||||||| |||| | ||||||||| | ||||||||| |||||||||||| ||||    
T  33348030 tattatccaagatatttaaactcaaaattatgcattaatatgcgtaattgggtcaactgtgtcatgtattaagtgacg 33347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 4890020 - 4889972
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||    
T  4890020 atattattcaagatatttaagctcaaaattatgcattgacatgcgtaat 4889972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 995737 - 995815
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  995737 atattattcaagatatttaaactcaaaattactcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 995815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 6142401 - 6142323
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  6142401 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 6142323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 10105985 - 10106063
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||| || || |||||||| |||||| || ||||||   ||||||||| |||||||||| ||||||    
T  10105985 atattattcaagatattaaatctcaaaattatgcattgatatacgtaatatggtcaactgtgtcatgtattatgggacg 10106063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 16969553 - 16969631
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  16969553 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 16969631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 29514921 - 29514843
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||| ||||||||| | ||||| ||| |||  ||||||||||||    
T  29514921 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaattgtgtcacttattaagggacg 29514843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 17496222 - 17496146
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||    
T  17496222 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaggga 17496146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 2141742 - 2141820
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  || |||||| | ||||||||| |||| ||||||| ||||    
T  2141742 atattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcatttattaagagacg 2141820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 2667219 - 2667141
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  |||||||||   ||||||||| |||  ||||||||||||    
T  2667219 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcacttattaagggacg 2667141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 24798439 - 24798366
Alignment:
Q  5 tattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    ||||||||||||||||||| || |||||||  |||||  ||||||||| || |||||||| |||  ||||||||    
T  24798439 tattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcacttattaagg 24798366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 31948536 - 31948460
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    ||||||||||||||||| ||||| | |||||| |||||| |||||||||   ||||| ||| ||| ||||||||||||    
T  31948536 atattattcaagatatt-aagctcagaattatgcattgacatgcgtaataaggtcaattgtgtcaagtattaagggac 31948460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 2656564 - 2656516
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||||||||||||||| ||||||||||  |||||  |||||||||    
T  2656564 atattattcaagatatttaaacttaaaattacgcattggtatgcgtaat 2656516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 32972226 - 32972147
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||||| |||||||| ||||  ||||||||||||| |||||||| |||| ||||||||||||    
T  32972226 catattattcaagatatttaagctcaaaattatgcattagaatgcgtaatggaatcaactgtgtcatttattaagggacg 32972147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 19327488 - 19327565
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||||| | |||||||| ||||| ||| | |||||||||||||||| |||||||||||||||    
T  19327488 catattattcaagatatttaagttcaaaattatgcattggaatacataatggagtcaactgtgtcatgtattaaggga 19327565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 25571582 - 25571501
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    ||||||||||||||||||||||||||||||||  ||||| || |||||| | ||||||||| ||| |||||| |||||||||    
T  25571582 atattattcaagatatttaagcttaaaattatgtattgacattcgtaatagggtcaactgtgtcacgtattatgggacgaag 25571501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 38259653 - 38259732
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||  ||||| |||||||| | |||| ||||||||||||    
T  38259653 catattattcaagacatttaaacttaaaattatgcattgaaatgtataatgaagtcaactatgtcatatattaagggacg 38259732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 5842292 - 5842370
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||||| || ||||||   ||||||||| |||||||||| ||||||    
T  5842292 atattattcaagatatttaagctcaaaattatgcattgacattcgtaatatggtcaactgtgtcatgtattatgggacg 5842370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 28016585 - 28016665
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    |||||||||||||||||||||| | ||||||| |||||  ||||||||| |||| |||||| |||||||||| |||||||||    
T  28016585 atattattcaagatatttaagc-tcaaattatgcattggtatgcgtaatagagttaactgtgtcatgtattatgggacgaag 28016665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 35693720 - 35693639
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgaag 85  Q
    |||||||||||||||||||| || |||||||  |||||| ||||||||| | ||||||||| |||  |||||||||||||||    
T  35693720 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacgaag 35693639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 48448692 - 48448768
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    ||||||||||||||||||||||| |||||||| ||||   ||| ||||| | ||||||||| |||||||||||||||    
T  48448692 atattattcaagatatttaagctcaaaattatgcattagtatgtgtaattgggtcaactgtgtcatgtattaaggga 48448768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 9173226 - 9173156
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatt 74  Q
    ||||||||||||||||||||| | |||||||| |||||| ||||||||| | ||||||||| || ||||||    
T  9173226 atattattcaagatatttaagttcaaaattatgcattgacatgcgtaatagggtcaactgtgtcttgtatt 9173156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 29247801 - 29247879
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||| | ||| || |||||||| |||||||||   ||||||||| ||| |||||||||||||    
T  29247801 atattattcaagatatttaagttcaaagttgtacattgacatgcgtaataaggtcaactgtgtcaagtattaagggacg 29247879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 32345673 - 32345595
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| ||||||||||| |||  ||||||||||||    
T  32345673 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactgtgtcacttattaagggacg 32345595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 41007847 - 41007769
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || ||||||||||||||| || ||||||   ||||||||| ||| |||||| ||||||    
T  41007847 atattattcaagatatttaaactcaaaattatacattgacatacgtaataaggtcaactgtgtcaagtattatgggacg 41007769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 16807036 - 16806958
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||| |||||  ||||||||| | ||||||||| |||  ||||||| ||||    
T  16807036 atattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttattaagtgacg 16806958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 18756763 - 18756840
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| ||| |||| || |||||||| |||||| ||||||||| | ||||||||| |||||||||| ||||||    
T  18756763 atattattcaaaatagttaaactcaaaattatgcattgatatgcgtaatag-gtcaactgtgtcatgtattatgggacg 18756840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 38353489 - 38353411
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    ||||||||||||||||||||| ||||  ||||| |||||  |||| |||| || |||||||| |||||||||| |||||    
T  38353489 catattattcaagatatttaaacttagtattatgcattggcatgcataatagaatcaactgtgtcatgtattatgggac 38353411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 26651137 - 26651060
Alignment:
Q  5 tattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||| ||||||||   |||  ||||||||| | ||||||||| |||| ||||| ||||||    
T  26651137 tattattcaagatatttaagctcaaaattatgttttggtatgcgtaatagggtcaactgtgtcatttattatgggacg 26651060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 31496534 - 31496473
Alignment:
Q  7 ttattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatca 68  Q
    |||||||||||||||||| | |||||||| |||||| |||||||||   |||||||||||||    
T  31496534 ttattcaagatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgtatca 31496473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 38069225 - 38069302
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggac 81  Q
    |||||||| ||||||||||| || |||||||  |||||| ||||||||| | ||||||||| |||  |||||||||||    
T  38069225 atattatttaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggac 38069302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 3124036 - 3123960
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    ||||||||||||||||||||||| |||  ||| |||||| |||||||||   ||||||||| ||| |||||| ||||    
T  3124036 atattattcaagatatttaagctcaaagatatgcattgacatgcgtaataaggtcaactgtgtcaagtattatggga 3123960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 33376948 - 33376986
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattga 42  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  33376948 atattattcaagatatttaagctcaaagttatacattga 33376986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 36820050 - 36820128
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||| ||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  36820050 atattattcatgatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 36820128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 38441987 - 38442061
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagg 78  Q
    ||||||||||||||||||||||| |||||||| |||| | || |||| |  |||||||||| |||  ||||||||    
T  38441987 atattattcaagatatttaagctcaaaattatgcattaatatacgtagtaaagtcaactgtgtcaaatattaagg 38442061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 40232414 - 40232479
Alignment:
Q  17 tatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||| || ||||||| ||||||| ||||||||| | ||||||||| |||  ||||||||||||    
T  40232414 tatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtcacttattaagggacg 40232479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 19817509 - 19817545
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacatt 40  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  19817509 atattattcaagatatttaaacttaaaattatgcatt 19817545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 25273907 - 25273859
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||||||||||||||| || |||||||  |||||| |||||||||    
T  25273907 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaat 25273859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 30462111 - 30462035
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||||||||||||||| ||||||||||  |||||  || | |||| |  ||||||||||||  ||||||||||    
T  30462111 atattattcaagatatttaaacttaaaattacgcattggtatacataattggatcaactgtatcacttattaaggga 30462035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 38850876 - 38850908
Alignment:
Q  4 atattattcaagatatttaagcttaaaattata 36  Q
    ||||||||||||||||||||||| |||||||||    
T  38850876 atattattcaagatatttaagctcaaaattata 38850908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 41844944 - 41845020
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaaggga 80  Q
    |||||||| |||||||||||||| ||| |||| |||| |||||||||||   ||||| ||| | | |||||||||||    
T  41844944 atattattgaagatatttaagctcaaagttatgcattaaaatgcgtaataaggtcaaatgtgttaagtattaaggga 41845020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 47713322 - 47713274
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaat 52  Q
    |||||||||| |||||||||||| ||| |||| |||||| |||||||||    
T  47713322 atattattcacgatatttaagctcaaagttatgcattgacatgcgtaat 47713274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 13278 - 13357
Alignment:
Q  3 catattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||||| | ||||||||  |||| ||||||||||||||| |||||| |||| ||||||||||||    
T  13278 catattattcaagatatttaaggtcaaaattatgtattggaatgcgtaatggagttaactgtgtcatatattaagggacg 13357  T

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Target: scaffold0500 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 570 - 489
Alignment:
Q  1 atcatattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||| ||||||||||||||||||||| |||||||| |||||| || |||||| | ||||||||| |||||||||| ||||||    
T  570 atcacattattcaagatatttaagctcaaaattatgcattgacatacgtaatagggtcaactgtgtcatgtattatgggacg 489  T

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Target: scaffold1248 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 1346 - 1275
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    |||||||||| ||||||||||||||||||||| |||||| |||| |||| || |||||| | ||||||||||    
T  1346 atattattcaggatatttaagcttaaaattatgcattgatatgcataatagaatcaactatgtcatgtatta 1275  T

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Target: scaffold0952 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 967 - 1038
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    |||||||||| ||||||||||||||||||||| |||||| |||| |||| || |||||| | ||||||||||    
T  967 atattattcaggatatttaagcttaaaattatgcattgatatgcataatagaatcaactatgtcatgtatta 1038  T

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Target: scaffold0195 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 135 - 57
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || ||| ||||||||||  |||||||||   ||||||||| ||| |||||||||||||    
T  135 atattattcaagatatttaatctcaaagttatacattggcatgcgtaataaggtcaactgtgtcaagtattaagggacg 57  T

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Target: scaffold0172 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 19625 - 19547
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||||||||||||||| |||||||| |||||| || ||||||   ||||||||| ||| ||||||| |||||    
T  19625 atattattcaagatatttaagctcaaaattatgcattgacattcgtaataaggtcaactgtgtcaagtattaatggacg 19547  T

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Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 9297 - 9368
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtatta 75  Q
    |||||||||||||||||||| || |||  |||||||||| |||||||||   ||||||||||||| ||||||    
T  9297 atattattcaagatatttaaactaaaagctatacattgatatgcgtaataaggtcaactgtatcaagtatta 9368  T

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Target: scaffold0221 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 5550 - 5628
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | ||||||||| |||  ||||||||||||    
T  5550 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacg 5628  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 184140 - 184218
Alignment:
Q  4 atattattcaagatatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    |||||||||||||||||||| || |||||||  |||||  ||||||||| | |||||||||||||  |||||| |||||    
T  184140 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaaaggacg 184218  T

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Target: scaffold0283 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 3169 - 3235
Alignment:
Q  16 atatttaagcttaaaattatacattgaaatgcgtaatggagtcaactgtatcatgtattaagggacg 82  Q
    ||||||||||| |||||||| |||||  |||||||||   ||||||||| |||||||||| ||||||    
T  3169 atatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacg 3235  T

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