View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12142_low_15 (Length: 333)

Name: NF12142_low_15
Description: NF12142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12142_low_15
NF12142_low_15
[»] chr3 (15 HSPs)
chr3 (162-326)||(55146302-55146466)
chr3 (19-145)||(55146537-55146663)
chr3 (28-120)||(30715874-30715966)
chr3 (35-120)||(38108772-38108857)
chr3 (45-120)||(51011551-51011625)
chr3 (38-121)||(44846955-44847038)
chr3 (40-86)||(44810660-44810706)
chr3 (40-125)||(18912259-18912344)
chr3 (38-121)||(44006394-44006477)
chr3 (45-120)||(52560282-52560357)
chr3 (40-121)||(2286026-2286107)
chr3 (19-120)||(33942707-33942808)
chr3 (37-86)||(48165252-48165301)
chr3 (40-84)||(14336936-14336980)
chr3 (38-86)||(42993464-42993512)
[»] chr1 (6 HSPs)
chr1 (37-120)||(38043386-38043469)
chr1 (40-117)||(18239454-18239531)
chr1 (19-86)||(15291184-15291251)
chr1 (37-86)||(18243429-18243478)
chr1 (38-86)||(37770228-37770276)
chr1 (40-120)||(45471404-45471484)
[»] chr6 (1 HSPs)
chr6 (19-120)||(5613795-5613896)
[»] chr4 (12 HSPs)
chr4 (37-120)||(22438574-22438657)
chr4 (25-121)||(39390885-39390981)
chr4 (38-120)||(43036469-43036551)
chr4 (39-120)||(9981107-9981188)
chr4 (40-84)||(25411667-25411711)
chr4 (40-120)||(35430497-35430577)
chr4 (38-86)||(36505759-36505807)
chr4 (37-120)||(2333821-2333904)
chr4 (38-121)||(32715268-32715351)
chr4 (38-120)||(40729905-40729987)
chr4 (37-85)||(22436072-22436120)
chr4 (38-86)||(47110744-47110792)
[»] chr5 (8 HSPs)
chr5 (19-121)||(19870451-19870553)
chr5 (38-121)||(43294195-43294278)
chr5 (19-84)||(9042419-9042484)
chr5 (19-120)||(23067640-23067741)
chr5 (40-84)||(12075899-12075943)
chr5 (38-118)||(36759194-36759274)
chr5 (37-96)||(37979849-37979908)
chr5 (38-120)||(26747694-26747776)
[»] chr7 (12 HSPs)
chr7 (37-121)||(43349575-43349658)
chr7 (19-102)||(46529481-46529563)
chr7 (38-120)||(1299066-1299148)
chr7 (38-84)||(27543002-27543048)
chr7 (43-120)||(3615322-3615399)
chr7 (38-86)||(47317782-47317830)
chr7 (38-84)||(3614417-3614463)
chr7 (70-120)||(46790695-46790745)
chr7 (37-86)||(31594303-31594352)
chr7 (37-121)||(10555069-10555153)
chr7 (38-86)||(47944385-47944433)
chr7 (38-86)||(47949815-47949863)
[»] chr2 (4 HSPs)
chr2 (38-120)||(31854231-31854313)
chr2 (44-117)||(44070750-44070823)
chr2 (38-120)||(40614739-40614822)
chr2 (38-120)||(31500780-31500862)
[»] scaffold0530 (1 HSPs)
scaffold0530 (40-84)||(7628-7672)
[»] scaffold0146 (1 HSPs)
scaffold0146 (38-86)||(32324-32372)
[»] chr8 (6 HSPs)
chr8 (40-120)||(6253302-6253382)
chr8 (38-120)||(33073677-33073759)
chr8 (40-85)||(20086227-20086272)
chr8 (59-120)||(41270321-41270382)
chr8 (38-86)||(8037282-8037330)
chr8 (41-84)||(24689800-24689844)
[»] scaffold0325 (1 HSPs)
scaffold0325 (38-121)||(2812-2895)


Alignment Details
Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 162 - 326
Target Start/End: Complemental strand, 55146466 - 55146302
Alignment:
Q  162 gattgctatataaatttatcaaatcctcgtaatattttttattcatgaaaaattgacactnnnnnnnngagccaaagagggaagaaatgcatcagttctt 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  55146466 gattgctatataaatttatcaaatcctcgtaatattttttattcatgaaaaattgacactaaaaaaaagagccaaagagggaagaaatgcatcagttctt 55146367  T
Q  262 tttatcttcctttgttatgccatggattgatttttcgcattttacaattcttgttatctctgctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55146366 tttatcttcctttgttatgccatggattgatttttcgcattttacaattcttgttatctttgctt 55146302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 55146663 - 55146537
Alignment:
Q  19 aactggcggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattt 118  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  55146663 aactgccggcgctttgaataacggtagttaactatcgttgggggtatttatgtattttaattgtgtcaataggaactttcctttttcaaaaaagcaattt 55146564  T
Q  119 tcacaaacatttcctatatatatatat 145  Q
    ||||||||||||||| |||||||||||    
T  55146563 tcacaaacatttcctttatatatatat 55146537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 30715966 - 30715874
Alignment:
Q  28 cgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| || |||||||| ||| |||||||||||||||||    
T  30715966 cgctttggataacggtagttaactaccgctgggggtatttatgtattttacttgtgtcaataggaactttcatttgtcaaaaaagcaattttc 30715874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 38108857 - 38108772
Alignment:
Q  35 aataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||   || |||||||||||||||||    
T  38108857 aataacggtagttaactaccgctggaggtatttaagtattttacttgtgtcaataggaactttttattgtcaaaaaagcaattttc 38108772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 51011625 - 51011551
Alignment:
Q  45 gttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||||||||| | |||||||||||||||||||||||||| || |||||||||||| ||| |||| ||||||||    
T  51011625 gttaactaccgtttggggtatttatgtattttacttgtgtcaataggaactttcctttctcacaaaa-caattttc 51011551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 44847038 - 44846955
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| | | |||| ||| |  | ||| ||||||||||||||    
T  44847038 aacggtagttaactaccgctggaggtatttaagtattttacttgtgttaatgtgaagttttcaatgtcagaaaagcaattttca 44846955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 44810660 - 44810706
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||    
T  44810660 cggtagttaactaccgctggaggtatttaagtattttacttttgtca 44810706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 18912259 - 18912344
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttcacaaa 125  Q
    |||||||||||  ||| |||||| ||||  ||||||||||||||||| |||||| ||| |  | ||| ||||||||||||||||||    
T  18912259 cggtagttaacggccgctggaggcattttagtattttacttgtgtcaatatgaaattttcactgtcagaaaagcaattttcacaaa 18912344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 44006477 - 44006394
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    |||||||||||||||||| ||| || ||||| ||||||||||| ||||| | |||| ||| |  | ||| ||||||||||||||    
T  44006477 aacggtagttaactaccgctgggggcatttaagtattttacttatgtcattgtgaaattttcaatgtcagaaaagcaattttca 44006394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 52560357 - 52560282
Alignment:
Q  45 gttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||| ||| |||||| ||||| ||||||||||||||||| || |||  || | || |||||||||||||||||    
T  52560357 gttaactgccgctggaggcatttacgtattttacttgtgtcaataggaaggtttcattgtcaaaaaagcaattttc 52560282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 2286026 - 2286107
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    ||||||||||| |||||||| || ||  |  |||||||| ||||||  |||||||||| || | ||||||||||||||||||    
T  2286026 cggtagttaacgaccgttgggggcataaacatattttacctgtgtctttatgaacttttctatgtcaaaaaagcaattttca 2286107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 33942707 - 33942808
Alignment:
Q  19 aactggcggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattt 118  Q
    ||||| |||||||| |  ||||||  ||||||| ||||||| || | |||||||  |||||||||||| || ||| |||||| | ||| |||||||||||    
T  33942707 aactgtcggcgcttaggctaacggctgttaactgccgttgggggcaattatgtaaattacttgtgtcaataggaagtttcctatgtcacaaaagcaattt 33942806  T
Q  119 tc 120  Q
    ||    
T  33942807 tc 33942808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 48165252 - 48165301
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    ||||||| ||||||| |||||||||| ||||| ||||||||||| |||||    
T  48165252 taacggttgttaactgccgttggaggcatttacgtattttacttatgtca 48165301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 14336980 - 14336936
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgt 84  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||||    
T  14336980 cggtagttaactaccgttggaagtattttagtattttatttgtgt 14336936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 42993464 - 42993512
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||||||||||| ||| | || ||||||||| |||||||||||||||||    
T  42993464 aacggtagttaaatactgctgaaggtatttaagtattttacttgtgtca 42993512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 38043469 - 38043386
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||    
T  38043469 taacggtagttaactaccgctggaggtatttatgtattttacttctgtcaataggaactttcctttatcaaaaaagcaattttc 38043386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 18239531 - 18239454
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaatt 117  Q
    |||| ||||||| ||||||| |||||||  ||||||||||||||||| || ||| ||| || | ||||||||||||||    
T  18239531 cggttgttaactgccgttgggggtattttagtattttacttgtgtcaataggaagttttctatgtcaaaaaagcaatt 18239454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 15291251 - 15291184
Alignment:
Q  19 aactggcggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    ||||| ||||| |||| | |||||||||||||||||||||| ||  |||| ||| |||||||||||||    
T  15291251 aactgtcggcggtttgcagaacggtagttaactaccgttgggggcgtttaagtaatttacttgtgtca 15291184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 18243429 - 18243478
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    ||||||| ||||||| ||| ||| || |||||||||||||||||||||||    
T  18243429 taacggttgttaactgccgctgggggcatttatgtattttacttgtgtca 18243478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 37770276 - 37770228
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||| ||||||||||||||||| || ||||| ||||||||| |||||||    
T  37770276 aacgatagttaactaccgttgggggcatttaagtattttacgtgtgtca 37770228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 45471484 - 45471404
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||||||||||||| ||| || ||  | ||||||||||| ||||  |||||| ||| || | |||||||||||||||||    
T  45471484 cggtagttaactaccgctgggggcataaacgtattttacttatgtctttatgaagttttctatgtcaaaaaagcaattttc 45471404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 5613896 - 5613795
Alignment:
Q  19 aactggcggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattt 118  Q
    ||||| ||||| |||| |||| ||||||||||||||| ||| |||||||| |||||||||||| |||| || |||||||||||| |||||||||||||||    
T  5613896 aactgccggcggtttggataatggtagttaactaccgctgggggtatttaagtattttacttgggtcaataggaactttcctttgtcaaaaaagcaattt 5613797  T
Q  119 tc 120  Q
    ||    
T  5613796 tc 5613795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 22438574 - 22438657
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||||| || |||| ||||||| |||||||||||||||||    
T  22438574 taacgatagttaactaccgctgggggtatttatgtattttacttgtgtcaataggaacattcctttgtcaaaaaagcaattttc 22438657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 39390885 - 39390981
Alignment:
Q  25 cggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    ||||| |||| |||||||| ||||||||||| | | |||||||| |||||||| |||||| | || |||||||||||| ||||||||||||||||||    
T  39390885 cggcggtttggataacggttgttaactaccgctaggggtatttaagtattttatttgtgttaataggaactttcctttatcaaaaaagcaattttca 39390981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 43036469 - 43036551
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||||||||||||||| | | || ||||| ||||||||||||||||| | |||| |||  | | |||||||||||||||||    
T  43036469 aacggtagttaactaccgctaggggcatttaagtattttacttgtgtcattgtgaagttttttatgtcaaaaaagcaattttc 43036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 9981188 - 9981107
Alignment:
Q  39 acggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||| |||||||||| || ||| ||||| ||||||||||||||||| || ||| | | | || |||||||||||||||||    
T  9981188 acggtaattaactaccgctgaaggcatttacgtattttacttgtgtcaataggaagtattccttgtcaaaaaagcaattttc 9981107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 25411667 - 25411711
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgt 84  Q
    |||||||||||||||| |||||||||||  |||||||||||||||    
T  25411667 cggtagttaactaccgctggaggtattttagtattttacttgtgt 25411711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 35430577 - 35430497
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||||||||||||| ||  || ||  ||||||||||||||||||  |||||| ||| || | |||||||||||||||||    
T  35430577 cggtagttaactaccgctgagggcataaatgtattttacttgtgtctttatgaaattttctatgtcaaaaaagcaattttc 35430497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 36505807 - 36505759
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||||||||||||||||| ||| |||||||| |||||||| ||||||||    
T  36505807 aacggtagttaactaccgctgggggtatttaagtattttatttgtgtca 36505759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 2333821 - 2333904
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||| |||||| |||||||| || ||||| ||||||||||||||||| | |||| |||  | | ||| |||||||||||||    
T  2333821 taacggttgttaacaaccgttgggggcatttaagtattttacttgtgtcattgtgaagttttttatgtcagaaaagcaattttc 2333904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 32715351 - 32715268
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    |||||||||||||||||| ||||||  |||  |||  ||| |||||||| || ||| |||||| | ||||||||||||||||||    
T  32715351 aacggtagttaactaccgctggaggctttttagtaaattatttgtgtcaataggaagtttcctatgtcaaaaaagcaattttca 32715268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 40729905 - 40729987
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||||||||| ||||| ||| || ||||| ||||||||||||||||| | |||| ||| |  | ||| |||||||||||||    
T  40729905 aacggtagttaaataccgctggtggcatttaagtattttacttgtgtcattgtgaagttttcaatgtcagaaaagcaattttc 40729987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 22436120 - 22436072
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtc 85  Q
    |||||| |||||||| ||| |||||| ||||| ||||||||||||||||    
T  22436120 taacggcagttaactgccgctggaggcatttaagtattttacttgtgtc 22436072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 47110744 - 47110792
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||||||||||||||||| | | |||||||  |||||||||||||||||    
T  47110744 aacggtagttaactaccgctaggggtatttcagtattttacttgtgtca 47110792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 19870553 - 19870451
Alignment:
Q  19 aactggcggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattt 118  Q
    ||||| ||||| |||  |||||||| |||||||||||  |  |||||||| ||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  19870553 aactgtcggcggtttagataacggttgttaactaccgcggagggtatttaagtattttacttgtgtcaatagtaactttcctttgtcaaaaaagcaattt 19870454  T
Q  119 tca 121  Q
    |||    
T  19870453 tca 19870451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 43294278 - 43294195
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    |||||||||||||||||| | |||| ||| | ||||||||||||||||  |||||| ||| || | |||||||| |||||||||    
T  43294278 aacggtagttaactaccgctagaggcattaacgtattttacttgtgtctttatgaagttttctatgtcaaaaaaacaattttca 43294195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 9042419 - 9042484
Alignment:
Q  19 aactggcggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgt 84  Q
    ||||| ||||| |||| | |||||||||||||||||| ||| ||||||||  ||||||||||||||    
T  9042419 aactgccggcggtttggagaacggtagttaactaccgctgggggtatttaaatattttacttgtgt 9042484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 23067640 - 23067741
Alignment:
Q  19 aactggcggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattt 118  Q
    ||||| ||||| |||| | |||||||||||||||||| ||||||  |||| ||| ||||||||||||| |  ||||||| |  | ||| |||||||||||    
T  23067640 aactgccggcgatttgcagaacggtagttaactaccgctggaggcgtttaagtaatttacttgtgtcaattggaacttttcaatgtcagaaaagcaattt 23067739  T
Q  119 tc 120  Q
    ||    
T  23067740 tc 23067741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 12075943 - 12075899
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgt 84  Q
    |||||||||||||||| |||||||||||  |||||||||||||||    
T  12075943 cggtagttaactaccgctggaggtattttagtattttacttgtgt 12075899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 36759194 - 36759274
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattt 118  Q
    |||||||||||||||||| ||| || ||| | ||||||||||||||||| | |||| |||  | | |||||||||||||||    
T  36759194 aacggtagttaactaccgctgggggcattcaggtattttacttgtgtcaatgtgaagttttttatgtcaaaaaagcaattt 36759274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 37979908 - 37979849
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactt 96  Q
    ||||||| ||||||| ||| ||| |||||||| ||||||||||||||||| | |||||||    
T  37979908 taacggtcgttaactgccgctgggggtatttaggtattttacttgtgtcaatgtgaactt 37979849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 26747776 - 26747694
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||| ||||||||||| ||||||  |||  |||  |||||||||||| || ||| |||||| | |||||||||||||||||    
T  26747776 aacggttgttaactaccgctggaggctttttagtaaattacttgtgtcaataggaagtttcctatgtcaaaaaagcaattttc 26747694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 43349658 - 43349575
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    |||||||||||||| |||| ||| | |||| ||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||    
T  43349658 taacggtagttaaccaccgctgg-gatattgatgtattttacttgtgtcaatagaaactttcctttgtcaaaaaagcaattttca 43349575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 46529481 - 46529563
Alignment:
Q  19 aactggcggcgctttgaataacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttccttt 102  Q
    ||||| ||||| ||| |||||||||||||||||||  | ||| ||||||||||||||||||| ||||| |||||||||||||||    
T  46529481 aactgccggcggtttaaataacggtagttaactaca-tcggatgtatttatgtattttacttatgtcaatatgaactttccttt 46529563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 1299066 - 1299148
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||||||||||||||| |||||| | |||| ||  ||| |||||||| || ||| |||||| | |||||||||||||||||    
T  1299066 aacggtagttaactaccgctggaggcaattatatacattatttgtgtcaataggaagtttcctatgtcaaaaaagcaattttc 1299148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 27543048 - 27543002
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgt 84  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  27543048 aacggtagttaactaccattggaggcatttaagtattttacttgtgt 27543002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 3615322 - 3615399
Alignment:
Q  43 tagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||||||||||||| || ||||| |||||||| |||||||| || ||| | | | || |||||||||||||||||    
T  3615322 tagttaactaccgttgggggcatttacgtattttatttgtgtcaataggaagtattcattgtcaaaaaagcaattttc 3615399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 47317782 - 47317830
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||||||||||||||||| ||| || ||||| |||||||||||||||||    
T  47317782 aacggtagttaactaccgctgggggcatttaagtattttacttgtgtca 47317830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 3614463 - 3614417
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgt 84  Q
    |||||||||||||||||| ||| || ||||| |||||||||||||||    
T  3614463 aacggtagttaactaccgctgggggcatttacgtattttacttgtgt 3614417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 46790745 - 46790695
Alignment:
Q  70 gtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||||||||||||  |||||||||| || | |||||||||||||||||    
T  46790745 gtattttacttgtgtctttatgaacttttctatgtcaaaaaagcaattttc 46790695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 31594303 - 31594352
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    ||||||| |||||| |||||||| |  |||||||||||||||||||||||    
T  31594303 taacggttgttaacaaccgttggggacatttatgtattttacttgtgtca 31594352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 10555069 - 10555153
Alignment:
Q  37 taacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    ||||||| ||||||| ||||||| |  ||||| ||||||||||||||||| | |||||||  |  | ||| ||||||||||||||    
T  10555069 taacggttgttaactgccgttggggacatttaggtattttacttgtgtcaatgtgaacttatcaatgtcagaaaagcaattttca 10555153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 47944385 - 47944433
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||||| |||||| |||||||| | |||||| |||||||||||||||||    
T  47944385 aacggttgttaacaaccgttggggatatttaagtattttacttgtgtca 47944433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 47949815 - 47949863
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||||| |||||| |||||||| | |||||| |||||||||||||||||    
T  47949815 aacggttgttaacaaccgttggggatatttaagtattttacttgtgtca 47949863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 31854231 - 31854313
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    ||||||| ||||||| || ||| | |||||  ||||||||||||||||| | |||| |||||| | |||||||||||||||||    
T  31854231 aacggtaattaactatcgctggggatatttcagtattttacttgtgtcattgtgaagtttcctatatcaaaaaagcaattttc 31854313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 44070823 - 44070750
Alignment:
Q  44 agttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaatt 117  Q
    |||||||||||| |||||| ||||| ||||||||||||||||| || |||  || | || ||||||||||||||    
T  44070823 agttaactaccgctggaggcatttacgtattttacttgtgtcaataggaatgtttcattgtcaaaaaagcaatt 44070750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 40614739 - 40614822
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctt-tttcaaaaaagcaattttc 120  Q
    |||||||||||||||| | ||| || ||||| ||||||||||||||||  |||||| |||  || | |||||||||||||||||    
T  40614739 aacggtagttaactactgctgggggcatttaagtattttacttgtgtctttatgaagtttttttatgtcaaaaaagcaattttc 40614822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 31500862 - 31500780
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||| ||||||| ||| || ||| ||||  ||||||||||||||||| |||||| ||| | || ||| |||||||||||||    
T  31500862 aacggttgttaactgccgctgaaggcattttagtattttacttgtgtcaatatgaagttttcattgtcagaaaagcaattttc 31500780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 7628 - 7672
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgt 84  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||    
T  7628 cggtagttaactaccgttcggggtatttttgtattttacttgtgt 7672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 32324 - 32372
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    |||||||||||||||||| ||| || ||||| |||||||||||||||||    
T  32324 aacggtagttaactaccgctgggggcatttaagtattttacttgtgtca 32372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 6253382 - 6253302
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||||||||||||||||| || |||||  |||||||||||||||| | |||| ||| || | | | |||||||||||||    
T  6253382 cggtagttaactaccgttgggggcatttaattattttacttgtgtcattgtgaagttttctatgttagaaaagcaattttc 6253302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 33073759 - 33073677
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||||| |||||| |||| |||||| ||||| ||||||||||||||| | | |||| |||||| | ||| |||||||| ||||    
T  33073759 aacggttgttaacaaccgctggaggcatttaagtattttacttgtgttattgtgaagtttcctatgtcagaaaagcaaatttc 33073677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 20086227 - 20086272
Alignment:
Q  40 cggtagttaactaccgttggaggtatttatgtattttacttgtgtc 85  Q
    |||||||||||||||| |||||| ||||| |||||||| |||||||    
T  20086227 cggtagttaactaccgctggaggcatttaagtattttatttgtgtc 20086272  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 41270321 - 41270382
Alignment:
Q  59 gaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttc 120  Q
    |||| ||||| ||||||||||||||||| |||||| ||| |  | |||||||||||||||||    
T  41270321 gaggcatttacgtattttacttgtgtcaatatgaaattttcactgtcaaaaaagcaattttc 41270382  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 8037282 - 8037330
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtca 86  Q
    ||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  8037282 aacggcagttaactaccgctggggacatttatgtattttacttgtgtca 8037330  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 24689844 - 24689800
Alignment:
Q  41 ggtagttaactaccgttggagg-tatttatgtattttacttgtgt 84  Q
    |||||||||||||||||||||| |||||  |||||||||||||||    
T  24689844 ggtagttaactaccgttggaggatattttagtattttacttgtgt 24689800  T

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Target: scaffold0325 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 2895 - 2812
Alignment:
Q  38 aacggtagttaactaccgttggaggtatttatgtattttacttgtgtcagtatgaactttcctttttcaaaaaagcaattttca 121  Q
    |||||||||||||||||| ||  || ||| | ||||||||||| ||||  |||||| ||| || | ||||||||||||||||||    
T  2895 aacggtagttaactaccgctgtgggcattaacgtattttacttatgtctatatgaagttttctatgtcaaaaaagcaattttca 2812  T

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