View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12142_low_34 (Length: 214)

Name: NF12142_low_34
Description: NF12142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12142_low_34
NF12142_low_34
[»] chr2 (38 HSPs)
chr2 (17-129)||(5574477-5574589)
chr2 (14-132)||(9058476-9058594)
chr2 (14-128)||(17473020-17473134)
chr2 (14-132)||(10249368-10249486)
chr2 (14-125)||(28863458-28863569)
chr2 (19-130)||(33436091-33436202)
chr2 (14-128)||(13438343-13438457)
chr2 (19-130)||(30915461-30915572)
chr2 (14-129)||(32505634-32505749)
chr2 (23-129)||(7465730-7465836)
chr2 (19-128)||(40701478-40701587)
chr2 (14-125)||(19930806-19930917)
chr2 (19-128)||(28381646-28381755)
chr2 (14-140)||(20700803-20700929)
chr2 (19-128)||(4060685-4060794)
chr2 (19-128)||(40613893-40614002)
chr2 (24-128)||(27864704-27864808)
chr2 (19-130)||(38273133-38273244)
chr2 (18-130)||(38882801-38882915)
chr2 (14-130)||(26891490-26891606)
chr2 (14-130)||(42257191-42257307)
chr2 (14-129)||(2533123-2533237)
chr2 (14-107)||(2997473-2997566)
chr2 (19-129)||(36168835-36168945)
chr2 (14-128)||(38732354-38732468)
chr2 (14-128)||(43490121-43490235)
chr2 (24-105)||(17820000-17820081)
chr2 (24-129)||(33436210-33436315)
chr2 (14-122)||(3439985-3440093)
chr2 (14-130)||(45097721-45097837)
chr2 (24-127)||(41575138-41575242)
chr2 (14-107)||(13365374-13365467)
chr2 (14-85)||(3737986-3738057)
chr2 (59-131)||(17823781-17823853)
chr2 (24-78)||(3154193-3154247)
chr2 (60-102)||(16096873-16096914)
chr2 (60-102)||(42849793-42849834)
chr2 (14-78)||(3034969-3035033)
[»] chr8 (37 HSPs)
chr8 (14-128)||(15197333-15197447)
chr8 (14-138)||(34012282-34012406)
chr8 (14-137)||(14547913-14548036)
chr8 (14-128)||(12831047-12831161)
chr8 (14-128)||(40423929-40424043)
chr8 (14-127)||(5957831-5957944)
chr8 (14-128)||(1179926-1180040)
chr8 (19-128)||(504112-504221)
chr8 (14-129)||(37038478-37038593)
chr8 (19-128)||(23122588-23122697)
chr8 (19-129)||(44507078-44507188)
chr8 (14-123)||(10621073-10621182)
chr8 (24-130)||(10284627-10284733)
chr8 (14-128)||(43414567-43414681)
chr8 (14-107)||(8841418-8841511)
chr8 (23-128)||(15048177-15048281)
chr8 (14-84)||(9122229-9122299)
chr8 (14-131)||(4854849-4854966)
chr8 (14-131)||(15258915-15259032)
chr8 (14-130)||(16383375-16383491)
chr8 (156-212)||(32373677-32373733)
chr8 (14-130)||(34307214-34307330)
chr8 (14-131)||(24307779-24307896)
chr8 (14-128)||(38229429-38229542)
chr8 (14-128)||(20074928-20075034)
chr8 (14-128)||(30479460-30479574)
chr8 (24-130)||(42221513-42221619)
chr8 (24-129)||(32032724-32032828)
chr8 (14-130)||(16056387-16056503)
chr8 (14-129)||(17443824-17443939)
chr8 (65-130)||(24307627-24307692)
chr8 (49-128)||(14055613-14055692)
chr8 (39-102)||(2547100-2547162)
chr8 (39-102)||(29705466-29705528)
chr8 (89-127)||(9122196-9122234)
chr8 (14-129)||(25838196-25838303)
chr8 (14-74)||(42354574-42354634)
[»] chr3 (43 HSPs)
chr3 (14-130)||(49607412-49607528)
chr3 (14-133)||(53982006-53982125)
chr3 (14-128)||(33644200-33644314)
chr3 (19-124)||(48587082-48587187)
chr3 (19-123)||(52629305-52629409)
chr3 (19-131)||(54868886-54868998)
chr3 (17-130)||(27714880-27714993)
chr3 (14-127)||(31456690-31456803)
chr3 (17-131)||(11095344-11095456)
chr3 (14-128)||(8076393-8076507)
chr3 (19-129)||(17470404-17470514)
chr3 (14-130)||(36707414-36707526)
chr3 (19-131)||(33118842-33118954)
chr3 (14-128)||(26141518-26141632)
chr3 (14-138)||(41189750-41189874)
chr3 (14-123)||(26754700-26754809)
chr3 (14-130)||(11347908-11348024)
chr3 (14-129)||(9562998-9563113)
chr3 (14-128)||(14623825-14623939)
chr3 (14-140)||(24699940-24700066)
chr3 (19-128)||(20764906-20765015)
chr3 (19-128)||(51419351-51419460)
chr3 (14-131)||(11907368-11907485)
chr3 (14-107)||(13898041-13898134)
chr3 (19-124)||(30801724-30801829)
chr3 (14-129)||(35536625-35536740)
chr3 (19-128)||(47531865-47531974)
chr3 (14-106)||(36331315-36331407)
chr3 (14-129)||(8956761-8956876)
chr3 (14-128)||(45058539-45058652)
chr3 (14-132)||(35965768-35965878)
chr3 (24-128)||(41080709-41080811)
chr3 (14-129)||(48375692-48375807)
chr3 (24-105)||(25407143-25407225)
chr3 (58-102)||(52629951-52629994)
chr3 (66-129)||(36331416-36331479)
chr3 (24-123)||(42823116-42823215)
chr3 (24-131)||(1758452-1758561)
chr3 (60-102)||(53581792-53581833)
chr3 (59-129)||(21746212-21746284)
chr3 (25-106)||(35093607-35093688)
chr3 (60-100)||(40480874-40480913)
chr3 (47-107)||(43745767-43745827)
[»] chr4 (41 HSPs)
chr4 (14-133)||(48183035-48183154)
chr4 (14-128)||(6034044-6034158)
chr4 (14-128)||(11511448-11511562)
chr4 (14-130)||(480433-480549)
chr4 (14-130)||(50052414-50052530)
chr4 (14-128)||(41236347-41236461)
chr4 (14-130)||(42044353-42044469)
chr4 (14-129)||(29234231-29234346)
chr4 (14-128)||(54473519-54473633)
chr4 (14-130)||(29239884-29240000)
chr4 (24-128)||(3481654-3481758)
chr4 (14-130)||(24995093-24995209)
chr4 (14-128)||(50526157-50526271)
chr4 (14-131)||(23608232-23608349)
chr4 (19-128)||(31910192-31910301)
chr4 (14-132)||(29977881-29977999)
chr4 (14-128)||(40574779-40574893)
chr4 (19-90)||(41823920-41823991)
chr4 (14-129)||(50813878-50813993)
chr4 (14-123)||(53352552-53352660)
chr4 (14-130)||(19670702-19670818)
chr4 (15-130)||(32766956-32767071)
chr4 (14-132)||(55475187-55475305)
chr4 (14-107)||(17983729-17983822)
chr4 (14-131)||(29547945-29548062)
chr4 (24-129)||(47986207-47986312)
chr4 (14-129)||(44536732-44536846)
chr4 (60-133)||(47104539-47104612)
chr4 (14-107)||(48647712-48647805)
chr4 (14-128)||(55079699-55079814)
chr4 (14-128)||(8343149-8343263)
chr4 (14-128)||(18924481-18924595)
chr4 (27-129)||(28480267-28480369)
chr4 (27-129)||(28481142-28481244)
chr4 (27-129)||(28482017-28482119)
chr4 (14-99)||(29589726-29589811)
chr4 (39-101)||(33703245-33703306)
chr4 (14-88)||(56300151-56300225)
chr4 (24-128)||(29535377-29535480)
chr4 (55-96)||(18769141-18769182)
chr4 (24-84)||(18769043-18769103)
[»] chr5 (31 HSPs)
chr5 (19-129)||(2740273-2740383)
chr5 (14-138)||(33149624-33149748)
chr5 (14-128)||(14831814-14831928)
chr5 (14-130)||(18520870-18520986)
chr5 (14-130)||(36732928-36733044)
chr5 (14-128)||(40145407-40145521)
chr5 (19-128)||(35785199-35785308)
chr5 (14-130)||(13811650-13811766)
chr5 (21-128)||(42414295-42414402)
chr5 (14-128)||(28177775-28177889)
chr5 (14-128)||(35943878-35943992)
chr5 (14-128)||(26720516-26720630)
chr5 (14-128)||(26990265-26990379)
chr5 (14-136)||(15409596-15409718)
chr5 (14-130)||(31008986-31009102)
chr5 (14-129)||(6679697-6679812)
chr5 (14-127)||(36875598-36875702)
chr5 (14-130)||(3921251-3921367)
chr5 (14-129)||(2252154-2252269)
chr5 (14-128)||(33825310-33825424)
chr5 (27-130)||(38296201-38296304)
chr5 (24-141)||(16327888-16328005)
chr5 (19-80)||(31132392-31132453)
chr5 (37-129)||(41470425-41470517)
chr5 (24-131)||(39688893-39689000)
chr5 (24-128)||(6259997-6260101)
chr5 (14-128)||(20073502-20073616)
chr5 (19-84)||(21370048-21370113)
chr5 (24-131)||(9603810-9603917)
chr5 (65-123)||(10356639-10356698)
chr5 (14-105)||(39557503-39557594)
[»] chr7 (40 HSPs)
chr7 (19-131)||(7389386-7389498)
chr7 (19-130)||(40957705-40957816)
chr7 (19-129)||(3434561-3434671)
chr7 (14-130)||(8080369-8080485)
chr7 (14-130)||(19436173-19436289)
chr7 (17-129)||(36361902-36362014)
chr7 (14-125)||(3783998-3784109)
chr7 (14-128)||(38267040-38267154)
chr7 (17-129)||(36362025-36362137)
chr7 (14-130)||(38837215-38837331)
chr7 (14-128)||(19329842-19329956)
chr7 (14-128)||(35137533-35137647)
chr7 (14-128)||(4999500-4999614)
chr7 (14-127)||(32951479-32951592)
chr7 (14-125)||(3694370-3694481)
chr7 (14-129)||(46033787-46033902)
chr7 (14-141)||(8238199-8238327)
chr7 (19-123)||(35522881-35522985)
chr7 (14-130)||(38044195-38044311)
chr7 (14-132)||(36208169-36208287)
chr7 (14-139)||(41915730-41915855)
chr7 (25-128)||(21234401-21234504)
chr7 (14-129)||(22343360-22343475)
chr7 (34-128)||(46374808-46374902)
chr7 (19-130)||(11044186-11044287)
chr7 (24-130)||(18207178-18207283)
chr7 (14-128)||(32564412-32564526)
chr7 (14-128)||(31735884-31735991)
chr7 (24-98)||(16374820-16374894)
chr7 (14-128)||(40846099-40846213)
chr7 (62-130)||(10343597-10343665)
chr7 (24-128)||(39255920-39256023)
chr7 (14-129)||(26296643-26296758)
chr7 (14-130)||(7727904-7728020)
chr7 (26-94)||(27744307-27744375)
chr7 (24-130)||(35468851-35468957)
chr7 (24-105)||(2318239-2318320)
chr7 (24-128)||(41423682-41423786)
chr7 (24-129)||(12310905-12311008)
chr7 (60-102)||(32029751-32029792)
[»] chr1 (37 HSPs)
chr1 (14-130)||(2581913-2582029)
chr1 (14-128)||(9474862-9474976)
chr1 (14-128)||(47452306-47452420)
chr1 (14-129)||(50630457-50630572)
chr1 (19-128)||(3000319-3000428)
chr1 (19-130)||(38595152-38595263)
chr1 (14-129)||(51898669-51898784)
chr1 (14-128)||(27564721-27564835)
chr1 (14-130)||(8346374-8346490)
chr1 (14-130)||(38632307-38632423)
chr1 (21-128)||(48716275-48716382)
chr1 (19-128)||(43132-43241)
chr1 (14-130)||(32813245-32813361)
chr1 (19-125)||(44548367-44548473)
chr1 (14-129)||(41758804-41758919)
chr1 (14-128)||(37649198-37649312)
chr1 (14-138)||(45044546-45044670)
chr1 (19-132)||(26274428-26274541)
chr1 (14-129)||(37926424-37926539)
chr1 (14-127)||(11152364-11152476)
chr1 (21-98)||(13414791-13414868)
chr1 (19-107)||(26440755-26440843)
chr1 (14-133)||(49811513-49811632)
chr1 (14-128)||(50590986-50591100)
chr1 (14-130)||(5958986-5959102)
chr1 (19-130)||(23597082-23597193)
chr1 (14-128)||(47748443-47748556)
chr1 (20-101)||(48489328-48489408)
chr1 (19-123)||(44453984-44454088)
chr1 (14-128)||(41608479-41608593)
chr1 (28-128)||(3302533-3302633)
chr1 (33-108)||(44334175-44334250)
chr1 (39-102)||(750239-750301)
chr1 (60-123)||(34340071-34340133)
chr1 (60-102)||(4401453-4401494)
chr1 (60-102)||(7447950-7447991)
chr1 (60-102)||(50448194-50448235)
[»] chr6 (23 HSPs)
chr6 (14-137)||(32869669-32869792)
chr6 (14-129)||(11427615-11427732)
chr6 (14-125)||(22880644-22880755)
chr6 (14-128)||(17598554-17598668)
chr6 (14-128)||(29857827-29857941)
chr6 (14-130)||(6209451-6209567)
chr6 (14-137)||(23128113-23128236)
chr6 (14-128)||(31109386-31109500)
chr6 (14-129)||(31976247-31976362)
chr6 (14-132)||(15990028-15990146)
chr6 (14-130)||(31110747-31110861)
chr6 (14-130)||(15832575-15832691)
chr6 (14-130)||(30341346-30341462)
chr6 (14-124)||(28536474-28536582)
chr6 (14-128)||(15508010-15508124)
chr6 (14-127)||(946377-946490)
chr6 (14-106)||(4231570-4231662)
chr6 (24-130)||(12732480-12732586)
chr6 (14-128)||(31953016-31953130)
chr6 (14-123)||(9379698-9379807)
chr6 (60-102)||(7367674-7367715)
chr6 (60-102)||(26669943-26669984)
chr6 (14-84)||(30870058-30870128)
[»] scaffold0237 (1 HSPs)
scaffold0237 (14-128)||(4029-4143)
[»] scaffold1268 (1 HSPs)
scaffold1268 (14-128)||(915-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (14-128)||(915-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (14-130)||(10095-10211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-103)||(152523-152612)
[»] scaffold0316 (1 HSPs)
scaffold0316 (14-105)||(17077-17168)
[»] scaffold0110 (1 HSPs)
scaffold0110 (24-128)||(8859-8963)
[»] scaffold0119 (1 HSPs)
scaffold0119 (60-102)||(810-851)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 5574477 - 5574589
Alignment:
Q  17 gaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  5574477 gaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctat 5574576  T
Q  117 gtatcattactct 129  Q
    |||||||||||||    
T  5574577 gtatcattactct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 9058594 - 9058476
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  9058594 agaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 9058495  T
Q  114 tatgtatcattactcttat 132  Q
    |||||||||||||||||||    
T  9058494 tatgtatcattactcttat 9058476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 17473134 - 17473020
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||    
T  17473134 agaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtc 17473035  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  17473034 tatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 10249368 - 10249486
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||    
T  10249368 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtc 10249467  T
Q  114 tatgtatcattactcttat 132  Q
    |||||||||||||||||||    
T  10249468 tatgtatcattactcttat 10249486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 28863569 - 28863458
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  28863569 agaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 28863470  T
Q  114 tatgtatcatta 125  Q
    ||||||||||||    
T  28863469 tatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 33436091 - 33436202
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  33436091 agaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgt 33436190  T
Q  119 atcattactctt 130  Q
    ||||||||||||    
T  33436191 atcattactctt 33436202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 13438457 - 13438343
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || ||    
T  13438457 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtc 13438358  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  13438357 tatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 30915572 - 30915461
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || |||||||    
T  30915572 agagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgt 30915473  T
Q  119 atcattactctt 130  Q
    ||||||||||||    
T  30915472 atcattactctt 30915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 32505634 - 32505749
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||    
T  32505634 agaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtc 32505733  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  32505734 tatgtatcattactct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 7465730 - 7465836
Alignment:
Q  23 aaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatca 122  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||    
T  7465730 aaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatca 7465829  T
Q  123 ttactct 129  Q
    |||||||    
T  7465830 ttactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 40701587 - 40701478
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||    
T  40701587 agagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgt 40701488  T
Q  119 atcattactc 128  Q
    ||||||||||    
T  40701487 atcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 19930806 - 19930917
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||    
T  19930806 agaggagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtc 19930905  T
Q  114 tatgtatcatta 125  Q
    ||||||||||||    
T  19930906 tatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 28381646 - 28381755
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||||    
T  28381646 agagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgt 28381745  T
Q  119 atcattactc 128  Q
    ||||||||||    
T  28381746 atcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 20700929 - 20700803
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  | ||    
T  20700929 agaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtc 20700830  T
Q  114 tatgtatcattactcttataaaaaata 140  Q
    ||||||||||||||||| || ||||||    
T  20700829 tatgtatcattactcttttagaaaata 20700803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 4060794 - 4060685
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||| || |||||||    
T  4060794 agagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgt 4060695  T
Q  119 atcattactc 128  Q
    ||||||||||    
T  4060694 atcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 40613893 - 40614002
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  40613893 agagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgt 40613992  T
Q  119 atcattactc 128  Q
    ||||| ||||    
T  40613993 atcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 27864808 - 27864704
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 27864709  T
Q  124 tactc 128  Q
    |||||    
T  27864708 tactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 38273133 - 38273244
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||||| |||||| | |||||||    
T  38273133 agagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgt 38273232  T
Q  119 atcattactctt 130  Q
    ||||| ||||||    
T  38273233 atcataactctt 38273244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 38882801 - 38882915
Alignment:
Q  18 aagagaaaagagaaagtgtgcttgtgcggga---tccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatct 114  Q
    |||||||||||||||||| |||||||||||    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||    
T  38882801 aagagaaaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtct 38882899  T
Q  115 atgtatcattactctt 130  Q
    ||||||||||||||||    
T  38882900 atgtatcattactctt 38882915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 26891490 - 26891606
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||| ||||||||| ||||||||| || | |||||||||| || ||||||||||||||||||||||| | ||||||||||||||||||| ||  |    
T  26891490 agagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggc 26891589  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  26891590 tatgtatcataactctt 26891606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 42257307 - 42257191
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||| ||| | ||||||||||||||| ||||||||||||| | |||||||||||||||   | ||    
T  42257307 agaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtc 42257208  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  42257207 tatgtatcataactctt 42257191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 2533237 - 2533123
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||| |||||| |||||||||||||||||| || | ||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||  | ||    
T  2533237 agaggagataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtc 2533139  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  2533138 tatgtatcataactct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 2997473 - 2997566
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 107  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| |||||||||||||||||||    
T  2997473 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaag 2997566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 36168945 - 36168835
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||| |||||||||||| |||| ||| | |||||||| ||||||||||||| || ||||| ||||||| || |||||  | |||||||    
T  36168945 agagaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgt 36168846  T
Q  119 atcattactct 129  Q
    ||||| |||||    
T  36168845 atcataactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 38732468 - 38732354
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  |||| || ||||||||||||||||||||||||| || ||||||| ||| |||| || |     
T  38732468 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtt 38732369  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  38732368 tatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 43490235 - 43490121
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||| ||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| |||||||||| |||||||| || |     
T  43490235 agagaagaagaaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtt 43490136  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  43490135 tatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 17820000 - 17820081
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 105  Q
    ||||||||| |||| ||||| ||| ||||||| || || ||||||||||||||||||||||||| |||||||||||||||||    
T  17820000 aaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 17820081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 33436315 - 33436210
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||||||||||    ||||| ||   ||||||||||||||| ||||||||||||| |||||||||||| |||||  | ||||||||||||    
T  33436315 aaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcat 33436216  T
Q  124 tactct 129  Q
    ||||||    
T  33436215 tactct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 3440093 - 3439985
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||||||||| |||||||||||||| ||||||| |  || ||| ||||||||||||||||||| | | ||||||||||||||||| || ||    
T  3440093 agaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtc 3439994  T
Q  114 tatgtatca 122  Q
    || ||||||    
T  3439993 tacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 45097721 - 45097837
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || |||||||||||||| |||||||||| || ||||||||||||||||  | |     
T  45097721 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtt 45097820  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  45097821 tatgtatcataactctt 45097837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 41575242 - 41575138
Alignment:
Q  24 aaagagaaagtgtgcttgtgc-gggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatca 122  Q
    ||||||||||||||||||||  ||| ||||| |||| || ||||| |||||||||||  |||||||||||||||| ||| |||||  | |||||||||||    
T  41575242 aaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatca 41575143  T
Q  123 ttact 127  Q
    |||||    
T  41575142 ttact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 13365467 - 13365374
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 107  Q
    ||||||||  ||||||||||||| |||||||||| ||||  ||   || ||||||||||||||||||||||||| |||| |||||||| |||||    
T  13365467 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaag 13365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 3738057 - 3737986
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtc 85  Q
    |||| |||| ||| ||||| |||||||||||||| ||||| |||| || |||||||||||||||||||||||    
T  3738057 agaggagaggaaaaagaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 17823853 - 17823781
Alignment:
Q  59 tacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactctta 131  Q
    ||||||||||||||||||||||||||  | |  ||||||||||||||||  | | ||||||||||||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactctta 17823781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 3154247 - 3154193
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgt 78  Q
    ||||||||| |||| ||| |||||||||| ||||| |||||||||||||||||||    
T  3154247 aaagagaaactgtgtttgggcgggatccatgtgaccacgtgtcagatttttgtgt 3154193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 16096873 - 16096914
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  16096873 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 16096914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 42849834 - 42849793
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  42849834 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 42849793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 3034969 - 3035033
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgt 78  Q
    ||||||||  ||||||||||| | |||||||||| ||||  |||| || ||||||||||||||||    
T  3034969 agagaagaagaaagagaaagtatacttgtgcggggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 15197447 - 15197333
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15197447 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtc 15197348  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  15197347 tatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 34012282 - 34012406
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || ||    
T  34012282 agaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtc 34012381  T
Q  114 tatgtatcattactcttataaaaaa 138  Q
    ||||||||||||||| || ||||||    
T  34012382 tatgtatcattactcataaaaaaaa 34012406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 14548036 - 14547913
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||    
T  14548036 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtc 14547937  T
Q  114 tatgtatcattactcttataaaaa 137  Q
    |||||||| |||||||||| ||||    
T  14547936 tatgtatctttactcttatcaaaa 14547913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 12831161 - 12831047
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  12831161 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtc 12831062  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  12831061 tatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 40423929 - 40424043
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  40423929 agaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatc 40424028  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  40424029 tatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 5957944 - 5957831
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  5957944 agaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtc 5957845  T
Q  114 tatgtatcattact 127  Q
    ||||||||||||||    
T  5957844 tatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 1179926 - 1180040
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||    
T  1179926 agaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtc 1180025  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  1180026 tatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 504112 - 504221
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||    
T  504112 agagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgt 504211  T
Q  119 atcattactc 128  Q
    ||||||||||    
T  504212 atcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 37038593 - 37038478
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||    
T  37038593 agaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 37038494  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  37038493 tatgtatcattactct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 23122588 - 23122697
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| || |||||||    
T  23122588 agagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgt 23122687  T
Q  119 atcattactc 128  Q
    ||||||||||    
T  23122688 atcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 44507078 - 44507188
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| || |||||||    
T  44507078 agagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgt 44507177  T
Q  119 atcattactct 129  Q
    |||||||||||    
T  44507178 atcattactct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 10621073 - 10621182
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||  | ||    
T  10621073 agaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtc 10621172  T
Q  114 tatgtatcat 123  Q
    ||||||||||    
T  10621173 tatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 10284627 - 10284733
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| |||| || ||||||||||||    
T  10284627 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcat 10284726  T
Q  124 tactctt 130  Q
     ||||||    
T  10284727 aactctt 10284733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 43414567 - 43414681
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| |||||  | ||    
T  43414567 agaggagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtc 43414666  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  43414667 tatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 8841418 - 8841511
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 107  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  8841418 agaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaag 8841511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 15048177 - 15048281
Alignment:
Q  23 aaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatca 122  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  15048177 aaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 15048275  T
Q  123 ttactc 128  Q
    | ||||    
T  15048276 taactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 9122299 - 9122229
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgt 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9122299 agaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 4854849 - 4854966
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||||| || |||| ||| | || | |||||||||| ||| ||||| ||||||||||||||||||||||  | ||    
T  4854849 agaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtc 4854948  T
Q  114 tatgtatcattactctta 131  Q
    ||||||||||||||||||    
T  4854949 tatgtatcattactctta 4854966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 15258915 - 15259032
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||||||||| ||||||||||| || |||||||||| || |||||||||||| ||||| |||| | || |||||||||| |||||||||||    
T  15258915 agaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatc 15259014  T
Q  114 tatgtatcattactctta 131  Q
    |||||||||| |||||||    
T  15259015 tatgtatcataactctta 15259032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 16383491 - 16383375
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||||||||| || |     
T  16383491 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 16383392  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  16383391 tatgtatcataactctt 16383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 32373733 - 32373677
Alignment:
Q  156 taaatttattttatggtatatattttctcatacatatttcaatatacaacctctctg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32373733 taaatttattttatggtatatattttctcatacatatttcaatatacaacctctctg 32373677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 34307330 - 34307214
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| | ||  || | || ||||||||||||||||||||||||| ||||||||||||||||||| || |     
T  34307330 agagaagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 34307231  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  34307230 tatgtatcataactctt 34307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 24307779 - 24307896
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || | ||||||||||||||||||||||| || |||||||||||||||| || |     
T  24307779 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtt 24307878  T
Q  114 tatgtatcattactctta 131  Q
    |||||||||| |||||||    
T  24307879 tatgtatcataactctta 24307896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 38229542 - 38229429
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||| ||||||||| ||||||||| | | ||||||||||| || ||||||||||||||||||||||| | | | |||||||||||||||||| |     
T  38229542 agagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaagagtgtt 38229444  T
Q  114 tatgtatcattactc 128  Q
     ||||||||| ||||    
T  38229443 catgtatcataactc 38229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 20074928 - 20075034
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||| ||||||||||||||||||||| || ||||||||        ||| |||||| |||||||||||||| |||||||||||||||||  | ||    
T  20074928 agagaagaggaaagagaaagtgtgcttgtgcagggtccacgtg--------tcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtc 20075019  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  20075020 tatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 30479460 - 30479574
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||| | ||||  |  | || |||||||||||| ||||| |||||||||||||||||||||||||| || |     
T  30479460 agagaagaagaaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtt 30479559  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  30479560 tatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 42221619 - 42221513
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||||||||  ||| ||||  ||| ||||||||||||||||||||||||||| | |  ||||||| ||||||||  | | ||||||||||    
T  42221619 aaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcat 42221520  T
Q  124 tactctt 130  Q
    |||||||    
T  42221519 tactctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 32032828 - 32032724
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||||||| ||||||| |||||||  || | || |||||||||||||||||| |||| |||| |||||||||||||||| || | ||||||||||    
T  32032828 aaagagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtc-aaggatgtattgccacctaagggtgtttatgtatcat 32032730  T
Q  124 tactct 129  Q
     |||||    
T  32032729 aactct 32032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 16056387 - 16056503
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| || ||||||| ||| ||||  | |     
T  16056387 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtt 16056486  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  16056487 tatgtatcataactctt 16056503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 17443939 - 17443824
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  |||||||||||||  ||||| ||| ||||| ||||||| ||||||||||||||||| |||| ||   |||||||| ||||||||  | ||    
T  17443939 agagaagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtc 17443840  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  17443839 tatgtatcataactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 24307692 - 24307627
Alignment:
Q  65 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactctt 130  Q
    ||||||||||||||||||||||| || |||||||||||||||| || | |||||||||| ||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactctt 24307627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 14055613 - 14055692
Alignment:
Q  49 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactc 128  Q
    ||||||||||||| ||| |||||||||||||| |||||| | |||||||| |||||||| || || ||||||||| ||||    
T  14055613 tccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 2547100 - 2547162
Alignment:
Q  39 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    ||||| |||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  2547100 ttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 2547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 29705466 - 29705528
Alignment:
Q  39 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    ||||||||| |||| ||  | |||||||||| |||||||||||||| |||||||||||||||||    
T  29705466 ttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 29705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 9122234 - 9122196
Alignment:
Q  89 gggtgtattgccacctaagagtatctatgtatcattact 127  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  9122234 gggtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 25838303 - 25838196
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||| ||||||||||||| |||  |||| ||||| ||||||        ||||||| |||||||  |||||||||||||||||  ||||    
T  25838303 agaggagagaaaagaaaaagtgtgcttgtacggagtccatgtgacaacgtgt--------tgtgtggatgtcaaaaagtgtattgccacctaaggatatc 25838212  T
Q  114 tatgtatcattactct 129  Q
    ||| |||||| |||||    
T  25838211 tatttatcataactct 25838196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 42354574 - 42354634
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttt 74  Q
    ||||||||  ||||||||||||||||| || | ||||||| |||  |||||||||||||||    
T  42354574 agagaagatgaaagagaaagtgtgcttatgtgagatccacatgaacacgtgtcagattttt 42354634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 3e-50; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 49607528 - 49607412
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  49607528 agaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 49607429  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  49607428 tatgtatcattactctt 49607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 53982125 - 53982006
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  53982125 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 53982026  T
Q  114 tatgtatcattactcttata 133  Q
    ||||||||||||||| ||||    
T  53982025 tatgtatcattactcatata 53982006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 33644314 - 33644200
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||    
T  33644314 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtc 33644215  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  33644214 tatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 48587082 - 48587187
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  48587082 agagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgt 48587181  T
Q  119 atcatt 124  Q
    ||||||    
T  48587182 atcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 52629409 - 52629305
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  52629409 agagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgt 52629310  T
Q  119 atcat 123  Q
    |||||    
T  52629309 atcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 54868886 - 54868998
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||    
T  54868886 agagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgt 54868985  T
Q  119 atcattactctta 131  Q
    |||||||||||||    
T  54868986 atcattactctta 54868998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 27714880 - 27714993
Alignment:
Q  17 gaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctat 116  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||  || |||||    
T  27714880 gaagagagaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctat 27714979  T
Q  117 gtatcattactctt 130  Q
    ||||||||||||||    
T  27714980 gtatcattactctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 31456803 - 31456690
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| | || ||    
T  31456803 agaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtc 31456704  T
Q  114 tatgtatcattact 127  Q
    ||||||||||||||    
T  31456703 tatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 11095344 - 11095456
Alignment:
Q  17 gaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctat 116  Q
    ||||||||||||||||||||| || |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  11095344 gaagagaaaagagaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 11095441  T
Q  117 gtatcattactctta 131  Q
    |||||||||||||||    
T  11095442 gtatcattactctta 11095456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 8076507 - 8076393
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |     
T  8076507 agaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtt 8076408  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  8076407 tatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 17470514 - 17470404
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  || |||||||    
T  17470514 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgt 17470415  T
Q  119 atcattactct 129  Q
    |||||||||||    
T  17470414 atcattactct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 36707414 - 36707526
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  36707414 agaggagagaaaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatc 36707509  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  36707510 tatgtatcattactctt 36707526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 33118842 - 33118954
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||| |||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || |||||||    
T  33118842 agaggaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgt 33118941  T
Q  119 atcattactctta 131  Q
    ||||| |||||||    
T  33118942 atcataactctta 33118954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 26141518 - 26141632
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  | ||    
T  26141518 agaggagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtc 26141617  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  26141618 tatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 41189750 - 41189874
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||| ||| | |||||||| |||||| ||||||||||||| | ||||||||||||||||  | |     
T  41189750 agaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgta 41189849  T
Q  114 tatgtatcattactcttataaaaaa 138  Q
    |||||||||| ||||||| ||||||    
T  41189850 tatgtatcataactcttacaaaaaa 41189874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 26754809 - 26754700
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||||||||| |||||||||||||| |||| ||||| || |||||||||||||||||| |||| ||||||||||||||||||||| || ||    
T  26754809 agaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtc 26754710  T
Q  114 tatgtatcat 123  Q
    |||| |||||    
T  26754709 tatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 11347908 - 11348024
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||| ||| || |||| ||| | ||||||||||||||||||||| ||||||||| ||||||| ||||||||  | ||    
T  11347908 agaggagagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtc 11348007  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  11348008 tatgtatcataactctt 11348024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 9563113 - 9562998
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| | ||| ||||||||| ||||||| || ||||  || |     
T  9563113 agaggagagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtt 9563014  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  9563013 tatgtatcattactct 9562998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 14623825 - 14623939
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  |||||||||||||||||||| | | ||||| |||  || |||||||||||| |||||||||||| |||||||||||||||||||  | ||    
T  14623825 agagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtc 14623924  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  14623925 tatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 24699940 - 24700066
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| |||||||||||||| |||| | || |||||||| | ||||| ||||||||| ||||||||||||| |||||||||||| |||||  | ||    
T  24699940 agaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtc 24700039  T
Q  114 tatgtatcattactcttataaaaaata 140  Q
    |||||||||||||||| | ||||||||    
T  24700040 tatgtatcattactctaaaaaaaaata 24700066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 20764906 - 20765015
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||||| |||| |||| ||| | ||||||||||||||||||||||||| |||| ||||||| |||||||||  | |||||||    
T  20764906 agagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgt 20765005  T
Q  119 atcattactc 128  Q
     |||| ||||    
T  20765006 ctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 51419351 - 51419460
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||| || | ||| | ||||||||||||||||||||||||| ||||| ||||||| || |||||  | |||||||    
T  51419351 agagaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgt 51419450  T
Q  119 atcattactc 128  Q
    ||||| ||||    
T  51419451 atcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 11907485 - 11907368
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||| |||||||||||||| ||||  |||| || ||||||||||||||||| ||||  | | |||||||| |||||||| || ||    
T  11907485 agaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtc 11907386  T
Q  114 tatgtatcattactctta 131  Q
    |||||||||| |||||||    
T  11907385 tatgtatcataactctta 11907368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 13898041 - 13898134
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 107  Q
    ||||||||  |||||||||||||||||||| | | ||||| |||  ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  13898041 agagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaag 13898134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 30801724 - 30801829
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||| ||||||||| |||||||||| ||| ||||  ||||||| ||||| |||||||||||||| ||||||||||||||  |||||||| || |||||||    
T  30801724 agaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgt 30801823  T
Q  119 atcatt 124  Q
    ||||||    
T  30801824 atcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 35536740 - 35536625
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  |||||| |||||||||||||   | ||||| |||| |||||||| |||||| ||||||||||||| ||||||||||||| ||||  | ||    
T  35536740 agagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtc 35536641  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  35536640 tatgtatcattactct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 47531974 - 47531865
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||| | ||  || | |||||||||||| |||||||| ||| ||| |||||||||||| |||||  | |||||||    
T  47531974 agagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgt 47531875  T
Q  119 atcattactc 128  Q
    ||||| ||||    
T  47531874 atcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 36331315 - 36331407
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 106  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||| ||||||||||||    
T  36331315 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 8956876 - 8956761
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  |||||| |||||||||||||   | ||||| |||  |||||||| |||||| ||||||||||||||| ||||||||||| ||||  | ||    
T  8956876 agagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtc 8956777  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  8956776 tatgtatcattactct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 45058539 - 45058652
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||| | |||||||||| ||||  ||   || |||||||||||| |||||||||||| ||||||||||||||||||| || |     
T  45058539 agagaagaagaaagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtt 45058637  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  45058638 tatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 35965768 - 35965878
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||||||||||||||||||||| ||||||||||        ||||||||||| ||||||||||||||| ||||||  ||| ||||  | |     
T  35965768 agaggagaggaaagagaaagtgtgcttgtgcaggatccacgt--------gtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgta 35965859  T
Q  114 tatgtatcattactcttat 132  Q
    |||||||||||||||||||    
T  35965860 tatgtatcattactcttat 35965878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 41080811 - 41080709
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||| |||||||||| ||| ||||| |||| || | ||||||||||| |||||||||||||||||| |||| | |||||  | ||||||||||||    
T  41080811 aaagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcat 41080714  T
Q  124 tactc 128  Q
    |||||    
T  41080713 tactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 48375692 - 48375807
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||||||||| |||||||||||||| |||| ||||| ||  ||||||||||||| ||| | |  | |||||||||| |||||||| || ||    
T  48375692 agaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtc 48375791  T
Q  114 tatgtatcattactct 129  Q
    |||| ||||| |||||    
T  48375792 tatgaatcataactct 48375807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 25407143 - 25407225
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattgccaccta 105  Q
    |||||||||||||| ||||| ||||||||  |||  |||||||||| |||||||||| ||||||| |||| ||||||||||||    
T  25407143 aaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccaccta 25407225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 52629951 - 52629994
Alignment:
Q  58 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  52629951 ctacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 52629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 36331416 - 36331479
Alignment:
Q  66 cagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactct 129  Q
    ||||||||||||||| |||||| ||||| ||||||| ||||| || | |||||||||| |||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 42823215 - 42823116
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||||| | ||| |||||| ||||  |||| || ||||| |||||| |||||||||||| ||||||||| |||| |||  || | ||||||||||    
T  42823215 aaagagaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 1758452 - 1758561
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa--agggtgtattgccacctaagagtatctatgtatc 121  Q
    ||||||||| |||| ||||| ||  ||||||| || |  |||||||||||||||||||||||||   ||||||||||| ||||| |  |  |||||||||    
T  1758452 aaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatc 1758551  T
Q  122 attactctta 131  Q
    || |||||||    
T  1758552 ataactctta 1758561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 53581833 - 53581792
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  53581833 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 53581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 21746212 - 21746284
Alignment:
Q  59 tacgtgtcagatttttgtgt--gggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactct 129  Q
    ||||||||||||||||||||  ||||||| | |  ||||||||||||||||  | | ||||||||||||||||    
T  21746212 tacgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactct 21746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 35093688 - 35093607
Alignment:
Q  25 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 106  Q
    ||||||||||||||||||  ||  | ||| |||| || ||||||||||||| |||| ||||||| | ||||||| |||||||    
T  35093688 aagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaa 35093607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 40480874 - 40480913
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgcc 100  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  40480874 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcc 40480913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 43745827 - 43745767
Alignment:
Q  47 gatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 107  Q
    |||||||||||  |||||||| ||||||  |||| |||||||| |||||||||||| ||||    
T  43745827 gatccacgtgatgacgtgtcaaatttttacgtggatgtcaaagagtgtattgccacttaag 43745767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 48183035 - 48183154
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||    
T  48183035 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtc 48183134  T
Q  114 tatgtatcattactcttata 133  Q
    ||||||||||||||||||||    
T  48183135 tatgtatcattactcttata 48183154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 6034158 - 6034044
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  6034158 agaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 6034059  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  6034058 tatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 11511448 - 11511562
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||    
T  11511448 agagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtc 11511547  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  11511548 tatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 480433 - 480549
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  480433 agaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtc 480532  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  480533 tatgtatcattactctt 480549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 50052414 - 50052530
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||    
T  50052414 agaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtc 50052513  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  50052514 tatgtatcattactctt 50052530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 41236461 - 41236347
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||    
T  41236461 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtc 41236362  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  41236361 tatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 42044353 - 42044469
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| || ||    
T  42044353 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtc 42044452  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  42044453 tatgtatcattactctt 42044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 29234231 - 29234346
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||| || ||    
T  29234231 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtc 29234330  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  29234331 tatgtatcattactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 54473519 - 54473633
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||    
T  54473519 agaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtc 54473618  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  54473619 tatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 29240000 - 29239884
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| || ||    
T  29240000 agaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtc 29239901  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  29239900 tatgtatcattactctt 29239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 3481758 - 3481654
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  || ||||||||||||    
T  3481758 aaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcat 3481659  T
Q  124 tactc 128  Q
    |||||    
T  3481658 tactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 24995093 - 24995209
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| || ||    
T  24995093 agaggagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtc 24995192  T
Q  114 tatgtatcattactctt 130  Q
     || |||||||||||||    
T  24995193 catatatcattactctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 50526157 - 50526271
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | ||    
T  50526157 agaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 50526256  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  50526257 tatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 23608349 - 23608232
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||| ||||||||||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| || ||    
T  23608349 agaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtc 23608250  T
Q  114 tatgtatcattactctta 131  Q
    ||| ||||||||||||||    
T  23608249 tatatatcattactctta 23608232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 31910301 - 31910192
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||  | |||||||    
T  31910301 agagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgt 31910202  T
Q  119 atcattactc 128  Q
    ||||| ||||    
T  31910201 atcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 29977999 - 29977881
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  |||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||| || ||||||||||||||||| |  | |     
T  29977999 agagaagatgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctg 29977900  T
Q  114 tatgtatcattactcttat 132  Q
    |||||||||||||||||||    
T  29977899 tatgtatcattactcttat 29977881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 40574893 - 40574779
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||| ||||||||| ||  |  ||||||||||||||||||||||||||||||||||||| |||||||||  | ||    
T  40574893 agaggagagaaaagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtc 40574794  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  40574793 tatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 41823991 - 41823920
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagg 90  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  41823991 agagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 50813878 - 50813993
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| | ||  |||| || ||||||||||||||||||||||||| ||||||||| |||||||||||| |     
T  50813878 agagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtt 50813977  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  50813978 tatgtatcataactct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 53352552 - 53352660
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||| ||||| ||||  ||||||| |||||||| || ||    
T  53352552 agaggagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtc 53352650  T
Q  114 tatgtatcat 123  Q
    ||||||||||    
T  53352651 tatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 19670702 - 19670818
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||| ||||||| ||||||||||||||||||| || |     
T  19670702 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtt 19670801  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  19670802 tatgtatcataactctt 19670818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 32767071 - 32766956
Alignment:
Q  15 gagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatct 114  Q
    |||||||  ||||||||||||| ||||||| || ||||  || | || |||||||||||||| |||||||||| |||||||||||||||||||||| | |    
T  32767071 gagaagaagaaagagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgttt 32766972  T
Q  115 atgtatcattactctt 130  Q
    ||||||||| ||||||    
T  32766971 atgtatcataactctt 32766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 55475305 - 55475187
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| ||| ||| || ||||  || | || |||||||||||||||||||||||||||||||||||||||||||||  | |     
T  55475305 agagaagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtt 55475206  T
Q  114 tatgtatcattactcttat 132  Q
    |||||||||| ||||||||    
T  55475205 tatgtatcataactcttat 55475187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 17983729 - 17983822
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 107  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| |||||||||||||||||||    
T  17983729 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaag 17983822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 29547945 - 29548062
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||| ||||||| ||| |||||||||||  || | || ||||||||||||||||||||||||| || ||||||||||||||||  | |     
T  29547945 agagaagaagaaagaaaaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtt 29548044  T
Q  114 tatgtatcattactctta 131  Q
    |||||||||| |||||||    
T  29548045 tatgtatcataactctta 29548062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 47986312 - 47986207
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||||||| |||||||||| ||||  || | || |||||||||||||||||| |||||| || |||||||||||||||| || | ||||||||||    
T  47986312 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcat 47986213  T
Q  124 tactct 129  Q
     |||||    
T  47986212 aactct 47986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 44536732 - 44536846
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| ||| || ||| || |  |||| || |||||||||||||||||| |||||| |||||||||||||||||| ||| |     
T  44536732 agagaagaagaaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtt 44536830  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  44536831 tatgtatcataactct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 47104612 - 47104539
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactcttata 133  Q
    |||||||| |||||||||||||||||| || |||||||| || |||||| | ||||| ||||||||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactcttata 47104539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 48647712 - 48647805
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 107  Q
    |||| |||| ||||||||| |||||||||||||  |||||||||| |||||| |||||||| ||||||||| ||  |||||||||  |||||||    
T  48647712 agaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaag 48647805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 55079699 - 55079814
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcggga-tccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtat 112  Q
    ||||||||  ||||||||||||| |||||| |||  ||||  || | || |||||||||||||| ||||||||||  |||||||||||||||||| || |    
T  55079699 agagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgt 55079798  T
Q  113 ctatgtatcattactc 128  Q
     |||||||||| ||||    
T  55079799 ttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 8343149 - 8343263
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||| | ||| |||||| ||||  || | || |||||||||||| ||| ||||||||||| ||||||||||||||||  | |     
T  8343149 agagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtt 8343248  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  8343249 tatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 18924481 - 18924595
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||  | ||  |  | || |||||||||||||||||| | |||| ||||||||||||||||||| ||||     
T  18924481 agagaagaagaaagagaaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatt 18924580  T
Q  114 tatgtatcattactc 128  Q
    |||| ||||| ||||    
T  18924581 tatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 28480267 - 28480369
Alignment:
Q  27 gagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattac 126  Q
    ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||||||| |||| ||   |||||||| ||||||||  | ||||||||| || ||    
T  28480267 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28480366  T
Q  127 tct 129  Q
    |||    
T  28480367 tct 28480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 28481142 - 28481244
Alignment:
Q  27 gagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattac 126  Q
    ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||||||| |||| ||   |||||||| ||||||||  | ||||||||| || ||    
T  28481142 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28481241  T
Q  127 tct 129  Q
    |||    
T  28481242 tct 28481244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 28482017 - 28482119
Alignment:
Q  27 gagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattac 126  Q
    ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||||||| |||| ||   |||||||| ||||||||  | ||||||||| || ||    
T  28482017 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28482116  T
Q  127 tct 129  Q
    |||    
T  28482117 tct 28482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 29589726 - 29589811
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 99  Q
    ||||||||  ||||||||||||| |||||| ||| ||||  || | || | ||||||||||||||||||||||| |||||||||||    
T  29589726 agagaagaagaaagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattgc 29589811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 33703245 - 33703306
Alignment:
Q  39 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 101  Q
    |||||||||||||| ||  | |||||||||| |||||||||||||| ||||||||||||||||    
T  33703245 ttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 33703306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 56300151 - 56300225
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaa 88  Q
    |||| |||| |||||||||||||| |||||| |||| ||  |||| || |||||||||||||||||| |||||||    
T  56300151 agaggagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaa 56300225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 29535480 - 29535377
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||| ||||| |||||||||||| | | ||| || |||||||||||| |  |||  | ||||||| ||||||||| | ||||||||||||    
T  29535480 aaagagaaagtgtgtttgtgtgggatccacgtggccatgtg-catatttttgtgtggataccaagagatgtattgtcacctaagattgtctatgtatcat 29535382  T
Q  124 tactc 128  Q
     ||||    
T  29535381 aactc 29535377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 18769182 - 18769141
Alignment:
Q  55 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtat 96  Q
    |||| ||||||||||||||||||||||||| | |||||||||    
T  18769182 tgaccacgtgtcagatttttgtgtgggtgttagagggtgtat 18769141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 18769043 - 18769103
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgt 84  Q
    ||||||||| |||| ||||| |||||  || |||| || ||||||||||||||||||||||    
T  18769043 aaagagaaaatgtgtttgtgtgggatttacatgaccacatgtcagatttttgtgtgggtgt 18769103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 2740383 - 2740273
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  2740383 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgt 2740284  T
Q  119 atcattactct 129  Q
    |||||||||||    
T  2740283 atcattactct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 33149624 - 33149748
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || ||    
T  33149624 agaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtc 33149723  T
Q  114 tatgtatcattactcttataaaaaa 138  Q
    ||||||||||||||| || ||||||    
T  33149724 tatgtatcattactcataaaaaaaa 33149748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 14831928 - 14831814
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  14831928 agaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtc 14831829  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  14831828 tatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 18520870 - 18520986
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  18520870 agaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 18520969  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||| ||||    
T  18520970 tatgtatcattattctt 18520986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 36732928 - 36733044
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| || ||    
T  36732928 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtc 36733027  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  36733028 tatgtatcattactctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 40145521 - 40145407
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || ||    
T  40145521 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtc 40145422  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  40145421 tatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 35785308 - 35785199
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||    
T  35785308 agagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgt 35785209  T
Q  119 atcattactc 128  Q
    ||||||||||    
T  35785208 atcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 13811766 - 13811650
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| || ||    
T  13811766 agaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtc 13811667  T
Q  114 tatgtatcattactctt 130  Q
    |||||||| ||||||||    
T  13811666 tatgtatctttactctt 13811650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 42414295 - 42414402
Alignment:
Q  21 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtat 120  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||    
T  42414295 agaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtat 42414394  T
Q  121 cattactc 128  Q
    ||||||||    
T  42414395 cattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 28177889 - 28177775
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | ||    
T  28177889 agaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtc 28177790  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  28177789 tatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 35943878 - 35943992
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||| || ||    
T  35943878 agaggagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtc 35943977  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  35943978 tatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 26720630 - 26720516
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||||| ||||||||||||||||||||||  | ||    
T  26720630 agagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtc 26720531  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  26720530 tatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 26990379 - 26990265
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||||| ||||||||||||||||||||||  | ||    
T  26990379 agagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtc 26990280  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  26990279 tatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 15409596 - 15409718
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||  ||||||| ||||||||  | ||    
T  15409596 agaggagagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtc 15409695  T
Q  114 tatgtatcattactcttataaaa 136  Q
    |||||||||| ||||||| ||||    
T  15409696 tatgtatcataactcttacaaaa 15409718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 31009102 - 31008986
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||| ||||||||  | |     
T  31009102 agagaagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtt 31009003  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  31009002 tatgtatcataactctt 31008986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 6679812 - 6679697
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||| |||| ||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||   | ||    
T  6679812 agaggagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtc 6679713  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  6679712 tatgtatcataactct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 36875598 - 36875702
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| || ||    
T  36875598 agaggagaaaaaagagaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 36875688  T
Q  114 tatgtatcattact 127  Q
    ||||||||||||||    
T  36875689 tatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 3921251 - 3921367
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||||||||| || |     
T  3921251 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 3921350  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  3921351 tatgtatcataactctt 3921367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 2252154 - 2252269
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| |||||||||||||||||||  | |     
T  2252154 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtt 2252253  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  2252254 tatgtatcataactct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 33825310 - 33825424
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||||||| |||||||||||||||||||||   | | ||| |||  ||||||||||||||| |||||||||||| | |||||||||||||||||| | ||    
T  33825310 agagaagataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtc 33825409  T
Q  114 tatgtatcattactc 128  Q
    |||| ||||||||||    
T  33825410 tatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 38296304 - 38296201
Alignment:
Q  27 gagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattac 126  Q
    |||||||||||||||||  ||||||||||  ||||||||| ||||||||||||||| | ||  ||||||||| |||||||||   |||||||||||| ||    
T  38296304 gagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataac 38296205  T
Q  127 tctt 130  Q
    ||||    
T  38296204 tctt 38296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 16328005 - 16327888
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||| |||||||||||||| | | | ||| |||  ||||||||||||||| |||||||||||| || ||||||||||||||||  ||| ||| ||||||    
T  16328005 aaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcat 16327906  T
Q  124 tactcttataaaaaatag 141  Q
    |||| ||| |||| ||||    
T  16327905 tacttttaaaaaatatag 16327888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 31132453 - 31132392
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgg 80  Q
    |||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||||    
T  31132453 agagaaaagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 41470425 - 41470517
Alignment:
Q  37 gcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactct 129  Q
    ||||||||||| |||||||||||||||||||||||||| | ||  | | ||||| |||||||||||||||  || ||||||||| ||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactct 41470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 39688893 - 39689000
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||||||| ||| |||||| | ||  |||| || | ||||||||||||||||||||||| || ||||||||||| |||| || | ||||||||||    
T  39688893 aaagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcat 39688992  T
Q  124 tactctta 131  Q
     |||||||    
T  39688993 aactctta 39689000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 6259997 - 6260101
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||||||||||| || | | |||| ||||| | |||| ||||||||| |||||||| ||||||||||||| |||||| |  | | ||||||||||    
T  6259997 aaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcat 6260096  T
Q  124 tactc 128  Q
    |||||    
T  6260097 tactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 20073502 - 20073616
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||| ||||||||||||||||| || ||||||||   |||||  |||||||| |||| |||||||||||||||||| || ||||   | ||    
T  20073502 agaggagaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtc 20073601  T
Q  114 tatgtatcattactc 128  Q
    ||| |||||||||||    
T  20073602 tatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 21370113 - 21370048
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgt 84  Q
    |||| ||||||||| |||| ||||||||| |||||||||| || ||||||||||||| ||||||||    
T  21370113 agaggaaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 9603917 - 9603810
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||| ||||  ||| ||||  |||| | ||||||||||||||||| ||||| || | |||||||  ||||||||  | | ||||||||||    
T  9603917 aaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcat 9603818  T
Q  124 tactctta 131  Q
    ||||||||    
T  9603817 tactctta 9603810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  65 tcagatttttgtgtgggtgtcaaaggg-tgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||  | ||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 39557503 - 39557594
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 105  Q
    |||| ||| ||||||||||||||| ||||  ||| |||| ||||  ||||||||||||||||||||| ||| ||  |||||||| |||||||    
T  39557503 agaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 7e-48; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 7389498 - 7389386
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||    
T  7389498 agagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgt 7389399  T
Q  119 atcattactctta 131  Q
    |||||||||||||    
T  7389398 atcattactctta 7389386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 40957816 - 40957705
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  40957816 agagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgt 40957717  T
Q  119 atcattactctt 130  Q
    ||||||||||||    
T  40957716 atcattactctt 40957705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 3434671 - 3434561
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  | |||||||    
T  3434671 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgt 3434572  T
Q  119 atcattactct 129  Q
    |||||||||||    
T  3434571 atcattactct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 8080369 - 8080485
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||    
T  8080369 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtc 8080468  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  8080469 tatgtatcattactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 19436173 - 19436289
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  | ||    
T  19436173 agagaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtc 19436272  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  19436273 tatgtatcattactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 36361902 - 36362014
Alignment:
Q  17 gaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctat 116  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  36361902 gaagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctat 36362001  T
Q  117 gtatcattactct 129  Q
    |||||||||||||    
T  36362002 gtatcattactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 3784109 - 3783998
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| || ||    
T  3784109 agaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtc 3784010  T
Q  114 tatgtatcatta 125  Q
    ||||||||||||    
T  3784009 tatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 38267154 - 38267040
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||    
T  38267154 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtc 38267055  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  38267054 tatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 36362137 - 36362025
Alignment:
Q  17 gaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctat 116  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||    
T  36362137 gaagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctat 36362038  T
Q  117 gtatcattactct 129  Q
    |||||||||||||    
T  36362037 gtatcattactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 38837331 - 38837215
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||| || ||    
T  38837331 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtc 38837232  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  38837231 tatgtatcattactctt 38837215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 19329956 - 19329842
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||  | ||    
T  19329956 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtc 19329857  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  19329856 tatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 35137647 - 35137533
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||    
T  35137647 agaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 35137548  T
Q  114 tatgtatcattactc 128  Q
    ||| |||||||||||    
T  35137547 tatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 4999500 - 4999614
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||| ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| || ||    
T  4999500 agaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtc 4999599  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  4999600 tatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 32951479 - 32951592
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||| ||||||| || |||||||| ||    
T  32951479 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtc 32951578  T
Q  114 tatgtatcattact 127  Q
    ||||||||||||||    
T  32951579 tatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 3694481 - 3694370
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||| || |     
T  3694481 agaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtg 3694382  T
Q  114 tatgtatcatta 125  Q
    ||| ||||||||    
T  3694381 tatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 46033787 - 46033902
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||| | |||||||||||  | || ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  46033787 agaggagagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatc 46033886  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  46033887 tatgtatcataactct 46033902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 8238327 - 8238199
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta-agagtat 112  Q
    ||||||||  ||||||||||||| |||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| || || |    
T  8238327 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgt 8238228  T
Q  113 ctatgtatcattactcttataaaaaatag 141  Q
     |||||||||| |||| | | ||||||||    
T  8238227 ttatgtatcataactcattttaaaaatag 8238199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 35522985 - 35522881
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||||||||  || | ||||||||||||||||||||||||| ||| ||||||||||||| ||||  | |||||||    
T  35522985 agagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgt 35522886  T
Q  119 atcat 123  Q
    |||||    
T  35522885 atcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 38044311 - 38044195
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || |||| |||||||||||||||||| |||||| ||||||||||||||||||| || |     
T  38044311 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtt 38044212  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  38044211 tatgtatcataactctt 38044195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 36208287 - 36208169
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||||||||| ||||||||||| || |||||||||| || |||||| |||||||||||||||||| |  |||||| ||||||||| || ||    
T  36208287 agaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtc 36208188  T
Q  114 tatgtatcattactcttat 132  Q
    |||||||||| ||||||||    
T  36208187 tatgtatcataactcttat 36208169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 41915855 - 41915730
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || |||||||||||||||| |||||||| ||||||||||||||||||| || |     
T  41915855 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtt 41915756  T
Q  114 tatgtatcattactcttataaaaaat 139  Q
    |||||||||| |||||  ||||||||    
T  41915755 tatgtatcataactctattaaaaaat 41915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 21234504 - 21234401
Alignment:
Q  25 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcatt 124  Q
    |||||||| |||||||||||||| | || ||| |||||||||| ||||||||||| |||||||||||||||||| ||||||||  | ||||||||||||     
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcata 21234405  T
Q  125 actc 128  Q
    ||||    
T  21234404 actc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 22343475 - 22343360
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  ||   || ||||||||||||||||||||||||| ||||||||||||||||||| || |     
T  22343475 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 22343376  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  22343375 tatgtatcataactct 22343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  34 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactc 128  Q
    |||||||||||||| |||| ||| | ||||||||||||||||||||||||| ||||||||| ||||||||||||  | |||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 11044287 - 11044186
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||||||          |||||||||||| |||||||||||||||| || |||||||    
T  11044287 agaggaaagagaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagggtgtctatgt 11044198  T
Q  119 atcattactctt 130  Q
    ||||||||||||    
T  11044197 atcattactctt 11044186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 18207283 - 18207178
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||||||||| ||| | |||||| | |||||| |||||||||| ||||||||||  ||||||||||||||||||  | ||||||||||||    
T  18207283 aaagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcat 18207185  T
Q  124 tactctt 130  Q
     ||||||    
T  18207184 aactctt 18207178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 32564412 - 32564526
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  |||||||||||||  ||||||||| ||||  |  | || ||||||||||||||||||||||||| |||||||||||||||||||| | |     
T  32564412 agagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtt 32564511  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  32564512 tatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 31735991 - 31735884
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||||||||||||| ||| | |||||       ||||||||||||| |||| |||||||||||||||||  | ||    
T  31735991 agaggagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtg-------tttgtgtgggtgttaaagagtgtattgccacctaaggatgtc 31735899  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  31735898 tatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 16374820 - 16374894
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattg 98  Q
    |||||||| ||||||||||| | |||||||||||| ||||||||||||||||||||| |||||| || |||||||    
T  16374820 aaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 40846099 - 40846213
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  |||||||||||||  ||||||||| ||||  | ||||| ||| |||||||||||||| |||||| |||||||||||||||||||  | |     
T  40846099 agagaagaagaaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtt 40846198  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  40846199 tatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 10343597 - 10343665
Alignment:
Q  62 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattactctt 130  Q
    ||||||||||||||||||||||||||   ||||||| ||||||||| || |||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactctt 10343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 39255920 - 39256023
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||||||| |||||| ||  |||||||| | ||||||||||||||||| ||||| ||||  ||||||||||||||||||  | ||||||||||||    
T  39255920 aaagagaaagtgttcttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcat 39256018  T
Q  124 tactc 128  Q
     ||||    
T  39256019 aactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 26296758 - 26296643
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||| || ||||||||||| ||||  || | |||| |||||||||| ||||| ||| ||||||| ||||| ||||||||  | ||    
T  26296758 agaggagagaaaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtc 26296659  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  26296658 tatgtatcataactct 26296643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 7728020 - 7727904
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||| ||||||||| |||||||||| ||||  |||| || |||||||||||| ||||  ||||||  |||||||| ||||||||| || |     
T  7728020 agagaagaagaaacagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtt 7727921  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  7727920 tatgtatcataactctt 7727904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 27744307 - 27744375
Alignment:
Q  26 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgt 94  Q
    ||||||| ||||||| || |||||||||||| | || |||||||||||||||||||| |||||||||||    
T  27744307 agagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 35468851 - 35468957
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||| |||||| || ||||| ||   || | | |||||||| ||||||||||||| | |||||||||| |||||  | ||||||||||||    
T  35468851 aaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcat 35468950  T
Q  124 tactctt 130  Q
    |||||||    
T  35468951 tactctt 35468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 2318239 - 2318320
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 105  Q
    ||||||||||| ||||| ||  || |||||||||| ||  ||||||||||||||||||||||||  ||||| ||||||||||    
T  2318239 aaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccaccta 2318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 41423786 - 41423682
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||| | ||||||| ||||||| ||||||| || ||||||||||||||||  |||||||  |||||||| ||| ||||   | ||||||||||||    
T  41423786 aaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcat 41423687  T
Q  124 tactc 128  Q
     ||||    
T  41423686 aactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 12311008 - 12310905
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||| ||| ||||||||| | ||||||||||||| || |||||||||||||| ||| | || |  | | |||| ||||||||| || ||||||||||||    
T  12311008 aaagataaaatgtgcttgttcaggatccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaagggtgtctatgtatcat 12310911  T
Q  124 tactct 129  Q
     |||||    
T  12310910 aactct 12310905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 32029792 - 32029751
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  32029792 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 32029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 7e-48; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 2582029 - 2581913
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  2582029 agaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 2581930  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  2581929 tatgtatcattactctt 2581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 9474862 - 9474976
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  9474862 agaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 9474961  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  9474962 tatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 47452306 - 47452420
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||    
T  47452306 agaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtc 47452405  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  47452406 tatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 50630572 - 50630457
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||    
T  50630572 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatc 50630473  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  50630472 tatgtatcattactct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 3000428 - 3000319
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||    
T  3000428 agagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgt 3000329  T
Q  119 atcattactc 128  Q
    ||||||||||    
T  3000328 atcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 38595263 - 38595152
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || | |||||    
T  38595263 agagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgt 38595164  T
Q  119 atcattactctt 130  Q
    ||||||||||||    
T  38595163 atcattactctt 38595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 51898669 - 51898784
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||    
T  51898669 agaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 51898768  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  51898769 tatgtatcattactct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 27564721 - 27564835
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||  | ||    
T  27564721 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtc 27564820  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  27564821 tatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 8346374 - 8346490
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||  |    
T  8346374 agaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgac 8346473  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  8346474 tatgtatcattactctt 8346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 38632307 - 38632423
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| || ||    
T  38632307 agaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtc 38632406  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  38632407 tatgtatcattactctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 48716275 - 48716382
Alignment:
Q  21 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtat 120  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||||||||    
T  48716275 agaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtat 48716374  T
Q  121 cattactc 128  Q
    ||||||||    
T  48716375 cattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 43241 - 43132
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| | |||||||    
T  43241 agagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgt 43142  T
Q  119 atcattactc 128  Q
    ||||||||||    
T  43141 atcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 32813361 - 32813245
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  | ||    
T  32813361 agaggagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtc 32813262  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  32813261 tatgtatcataactctt 32813245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 44548367 - 44548473
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||   | |||||||    
T  44548367 agagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgt 44548466  T
Q  119 atcatta 125  Q
    |||||||    
T  44548467 atcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 41758919 - 41758804
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||  |||  || ||    
T  41758919 agaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtc 41758820  T
Q  114 tatgtatcattactct 129  Q
    ||||||||||||||||    
T  41758819 tatgtatcattactct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 37649312 - 37649198
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||   | ||    
T  37649312 agaggagagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtc 37649213  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  37649212 tatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 45044546 - 45044670
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||||||||||||| |||| ||||||||| |||| ||| |||| |||||||||||||| ||||||||||| ||||||||||||||||||   ||     
T  45044546 agagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatg 45044645  T
Q  114 tatgtatcattactcttataaaaaa 138  Q
    |||||||||| ||||||| ||||||    
T  45044646 tatgtatcataactcttaaaaaaaa 45044670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 26274541 - 26274428
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||| ||||| ||||||| | ||||||||||| |||| || |||||||    
T  26274541 agagaaaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgt 26274442  T
Q  119 atcattactcttat 132  Q
    ||||||| ||||||    
T  26274441 atcattattcttat 26274428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 37926424 - 37926539
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||| | ||||||||||||||| ||||||||| ||| | |||||||||||||||   ||||    
T  37926424 agagaagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatc 37926523  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  37926524 tatgtatcataactct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 11152364 - 11152476
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| ||| |||||| ||||||||||||| || || |||||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||    
T  11152364 agaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaag-gtgtc 11152462  T
Q  114 tatgtatcattact 127  Q
    ||||| ||||||||    
T  11152463 tatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 13414868 - 13414791
Alignment:
Q  21 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattg 98  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13414868 agaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 26440843 - 26440755
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 107  Q
    |||||||||||||||||||||| ||||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||| || |||||    
T  26440843 agagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaag 26440755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 49811513 - 49811632
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||  || |  || ||||||||||||||||||||||| ||||||| ||||||||| ||||||||  | ||    
T  49811513 agaggagagaaaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtc 49811612  T
Q  114 tatgtatcattactcttata 133  Q
    ||| |||||| |||||||||    
T  49811613 tatctatcataactcttata 49811632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 50590986 - 50591100
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||||||||| || |     
T  50590986 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 50591085  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  50591086 tatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 5958986 - 5959102
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  |||| || |||||||||||||||||||||||||  ||||||||||||| |||| || |     
T  5958986 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtt 5959085  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  5959086 tatgtatcataactctt 5959102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 23597082 - 23597193
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||||||||| |||||||| ||||||  | || ||||| | ||||||||||||||| ||||||| |||||| ||||||||||||||||   | |||||||    
T  23597082 agagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgt 23597181  T
Q  119 atcattactctt 130  Q
    ||||||||||||    
T  23597182 atcattactctt 23597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 47748556 - 47748443
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||| | |||||||||||||||  || | || |||||||||||| | |||||||||| ||||||||||||||||||| ||||     
T  47748556 agagaagaagaaagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatt 47748458  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  47748457 tatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 48489408 - 48489328
Alignment:
Q  20 gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 101  Q
    ||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||  ||||||||||||||    
T  48489408 gagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc-cagggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 44454088 - 44453984
Alignment:
Q  19 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgt 118  Q
    |||| ||||| |||||||||||||| ||||||||||| || || |||||||||||||||||||| ||||  | ||||||||||| |||  || |||||||    
T  44454088 agaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgt 44453989  T
Q  119 atcat 123  Q
    |||||    
T  44453988 atcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 41608479 - 41608593
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| ||||| |||| ||||  || | || ||||||||||||||||| ||||||| |||||||||||||||||||  | |     
T  41608479 agagaagaagaaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtt 41608578  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  41608579 tatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 3302533 - 3302633
Alignment:
Q  28 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcattact 127  Q
    |||||||||||||||  ||| ||||  ||| ||||||||||||||||||||||||||| | |  | ||||| ||||||||  | | ||||||||||||||    
T  3302533 agaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattact 3302632  T
Q  128 c 128  Q
    |    
T  3302633 c 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 44334175 - 44334250
Alignment:
Q  33 gtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaga 108  Q
    ||||| |||||| || |||| ||||||||||||||| ||||||||||| |||||| | ||||||| ||||| ||||    
T  44334175 gtgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtattaccaccaaaga 44334250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 750301 - 750239
Alignment:
Q  39 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    ||||| ||| |||| || || |||||||||| |||||||||||||| |||||||||||||||||    
T  750301 ttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 34340071 - 34340133
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    |||||||||||||||||||||   ||||  |||||||| |||||||||||| ||||||||||||    
T  34340071 acgtgtcagatttttgtgtggca-tcaacaggtgtattaccacctaagagtgtctatgtatcat 34340133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 4401453 - 4401494
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  4401453 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 4401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 7447950 - 7447991
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  7447950 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 50448235 - 50448194
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  50448235 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 50448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 32869792 - 32869669
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  32869792 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 32869693  T
Q  114 tatgtatcattactcttataaaaa 137  Q
    |||||||| |||||| || |||||    
T  32869692 tatgtatctttactcataaaaaaa 32869669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 11427732 - 11427615
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaga--gta 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||     
T  11427732 agaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtg 11427633  T
Q  112 tctatgtatcattactct 129  Q
    ||||||||||||||||||    
T  11427632 tctatgtatcattactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 22880644 - 22880755
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||    
T  22880644 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 22880743  T
Q  114 tatgtatcatta 125  Q
    ||||||||||||    
T  22880744 tatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 17598668 - 17598554
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| || ||    
T  17598668 agaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtc 17598569  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  17598568 tatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 29857941 - 29857827
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||  || ||    
T  29857941 agagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtc 29857842  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  29857841 tatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 6209451 - 6209567
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||| || ||    
T  6209451 agaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtc 6209550  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  6209551 tatgtatcattactctt 6209567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 23128113 - 23128236
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||| |||  || ||    
T  23128113 agaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtc 23128212  T
Q  114 tatgtatcattactcttataaaaa 137  Q
    ||| |||||||| |||| ||||||    
T  23128213 tatatatcattattcttttaaaaa 23128236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 31109386 - 31109500
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||| ||| |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||    
T  31109386 agaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtc 31109485  T
Q  114 tatgtatcattactc 128  Q
    |||  ||||||||||    
T  31109486 tattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 31976362 - 31976247
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||||||||||| | || ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||  | ||    
T  31976362 agaggagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtc 31976263  T
Q  114 tatgtatcattactct 129  Q
    |||||||||| |||||    
T  31976262 tatgtatcataactct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 15990028 - 15990146
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||||||||| || |     
T  15990028 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 15990127  T
Q  114 tatgtatcattactcttat 132  Q
    |||||||||| ||||||||    
T  15990128 tatgtatcataactcttat 15990146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 31110747 - 31110861
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||||| || |||| |||  |||||||||||||||  |||| |||||||||||||||||||||||||||  | ||    
T  31110747 agagtagagaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttt--tgtgagtgtcaaagggtgtattgccacctaaggatgtc 31110844  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  31110845 tatgtatcataactctt 31110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 15832691 - 15832575
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||| |||||||||| |||  |||||| |||||||||||||||||||||| |||||||||||||||||||| | | ||||| |||||||  || ||    
T  15832691 agaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtc 15832592  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||||||||||    
T  15832591 tatgtatcattactctt 15832575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 30341346 - 30341462
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||||||||| || |     
T  30341346 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 30341445  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  30341446 tatgtatcataactctt 30341462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 28536474 - 28536582
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||||||| ||||||||||||||||||||| ||| ||||| ||||  ||||||||||||||||||||||||||| || ||||||||||||||||  | |     
T  28536474 agagaagataaaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtt 28536571  T
Q  114 tatgtatcatt 124  Q
    |||||||||||    
T  28536572 tatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 15508010 - 15508124
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| ||||||||||||||||||| || |     
T  15508010 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 15508109  T
Q  114 tatgtatcattactc 128  Q
    |||||||||| ||||    
T  15508110 tatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 946490 - 946377
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| ||||||||||||||||||||| | |||||||  ||||||||| |||||||||||||| || ||||||||||||||||||  ||||||||  | ||    
T  946490 agaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtc 946391  T
Q  114 tatgtatcattact 127  Q
    |||||||| |||||    
T  946390 tatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 4231662 - 4231570
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 106  Q
    ||||||||  ||||||||||||| |||||||||| ||||  || | |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4231662 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaa 4231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 12732586 - 12732480
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||| ||||||| || ||||||||| |  | |||||||||||||||||||||||||||| |  | ||||||||| ||||| | ||||||||||||    
T  12732586 aaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcat 12732487  T
Q  124 tactctt 130  Q
    |||||||    
T  12732486 tactctt 12732480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 31953016 - 31953130
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  |||||||||||||| ||||| | | ||||| |||  || |||||||||||| |||||||||||| |||||||||||||||||||  | ||    
T  31953016 agagaagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtc 31953115  T
Q  114 tatgtatcattactc 128  Q
    ||| |||||||||||    
T  31953116 tatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 9379698 - 9379807
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||  ||||||||| |||| ||||| | ||||||| || | |||||||| |||||||| |||||||||| || ||||||| || |||||  | ||    
T  9379698 agagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtc 9379797  T
Q  114 tatgtatcat 123  Q
    ||||||||||    
T  9379798 tatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 7367674 - 7367715
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  7367674 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7367715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 26669984 - 26669943
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  26669984 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 26669943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 30870128 - 30870058
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgt 84  Q
    |||| |||| ||||||||| |||||||||||||| |||| ||||| || ||| |||||||| | |||||||    
T  30870128 agaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 4143 - 4029
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||  || ||    
T  4143 agagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtc 4044  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  4043 tatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 915 - 1029
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||   | ||    
T  915 agaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtc 1014  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  1015 tatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 915 - 1029
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||   | ||    
T  915 agaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtc 1014  T
Q  114 tatgtatcattactc 128  Q
    |||||||||||||||    
T  1015 tatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 10095 - 10211
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatc 113  Q
    |||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||  || ||    
T  10095 agaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtc 10194  T
Q  114 tatgtatcattactctt 130  Q
    |||||||||| ||||||    
T  10195 tatgtatcataactctt 10211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 152612 - 152523
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacc 103  Q
    ||||||||  |||||||||||||  ||||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||||    
T  152612 agagaagaagaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacc 152523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 17168 - 17077
Alignment:
Q  14 agagaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 105  Q
    ||||||||| ||||||||| |||||||||||||| |||| ||||| || |||||||||||||||||| |||| | || |||||||| |||||    
T  17168 agagaagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaaccta 17077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 8859 - 8963
Alignment:
Q  24 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtatctatgtatcat 123  Q
    ||||||||| ||| |||||| ||| |||||||||||| |||||| |||||||||| | |||||||  |||||||| ||| ||||  | ||||| ||||||    
T  8859 aaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcat 8958  T
Q  124 tactc 128  Q
     ||||    
T  8959 aactc 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 810 - 851
Alignment:
Q  60 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  810 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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