View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12142_low_6 (Length: 543)

Name: NF12142_low_6
Description: NF12142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12142_low_6
NF12142_low_6
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-517)||(200029-200544)
[»] chr4 (12 HSPs)
chr4 (1-517)||(28948413-28948928)
chr4 (1-517)||(22990554-22991060)
chr4 (110-517)||(22703057-22703454)
chr4 (384-517)||(22698733-22698866)
chr4 (384-517)||(22981664-22981797)
chr4 (384-517)||(22995251-22995384)
chr4 (1-115)||(22714557-22714671)
chr4 (380-503)||(56560508-56560631)
chr4 (380-469)||(24036208-24036297)
chr4 (380-503)||(16565539-16565662)
chr4 (380-466)||(15618844-15618930)
chr4 (414-476)||(52056980-52057042)
[»] chr5 (6 HSPs)
chr5 (384-517)||(22809984-22810117)
chr5 (380-503)||(33232457-33232580)
chr5 (380-503)||(7071992-7072115)
chr5 (380-503)||(22481515-22481638)
chr5 (277-323)||(22808657-22808703)
chr5 (430-503)||(27738523-27738596)
[»] chr8 (6 HSPs)
chr8 (384-517)||(19648194-19648327)
chr8 (380-469)||(193387-193476)
chr8 (380-469)||(720991-721080)
chr8 (380-469)||(882098-882187)
chr8 (380-469)||(30983217-30983306)
chr8 (380-503)||(44240122-44240245)
[»] chr1 (8 HSPs)
chr1 (384-517)||(4345989-4346122)
chr1 (380-503)||(46407488-46407611)
chr1 (387-503)||(35606336-35606452)
chr1 (380-469)||(50978933-50979022)
chr1 (380-503)||(35569867-35569990)
chr1 (1-79)||(5928141-5928219)
chr1 (422-462)||(50979027-50979067)
chr1 (75-103)||(5928350-5928378)
[»] chr3 (4 HSPs)
chr3 (384-517)||(7011653-7011786)
chr3 (380-469)||(51125377-51125466)
chr3 (380-469)||(52692542-52692631)
chr3 (407-486)||(16246797-16246876)
[»] chr2 (6 HSPs)
chr2 (384-513)||(23360928-23361058)
chr2 (380-503)||(13895999-13896122)
chr2 (380-503)||(14036616-14036739)
chr2 (380-469)||(14380107-14380196)
chr2 (380-503)||(5916905-5917028)
chr2 (380-503)||(36311597-36311720)
[»] chr6 (4 HSPs)
chr6 (380-503)||(21515663-21515786)
chr6 (380-469)||(30019220-30019309)
chr6 (380-503)||(16547456-16547579)
chr6 (387-464)||(17830768-17830845)
[»] chr7 (4 HSPs)
chr7 (380-464)||(37638703-37638787)
chr7 (5-79)||(20087918-20087992)
chr7 (380-464)||(10372715-10372799)
chr7 (419-476)||(12963342-12963399)
[»] scaffold0394 (1 HSPs)
scaffold0394 (387-458)||(6607-6678)


Alignment Details
Target: scaffold0009 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 1 - 517
Target Start/End: Complemental strand, 200544 - 200029
Alignment:
Q  1 tttgcttcggatttgttgttctcttatcctccataaactctatatttcagttttaactagttatatataagctatatttgcaatgccatgatttcttatg 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  200544 tttgcttcggatttgttgttcacttatcctccataaactatatatttcagttttaactagttatatataagctatatttgcaatgccatgatttcttatg 200445  T
Q  101 ttttttgtgacattcaaagcatgtttcttatggttttgcggctggtttggttgcgacttcaggtgctgttcctggcctgctaacctgctacggctggggg 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  200444 ttttttgtaacattcaaagcatgtttcttatggttttgcggctggtttggttgcagcttcaggtgctgttcctggcctgctaacctgctacggctggggg 200345  T
Q  201 tagttttttggccaagggcctggttggtttttgttgtctctgtaattgctttctagactttctaggcnnnnnnnnatgttaactggactgcctcttcctt 300  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||    
T  200344 tagttttttggccaagggtctggttggtttttgttgtctctgtagttgctttctagactttctaggc-tttttttatgttaactggactgcctcttcctt 200246  T
Q  301 ctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcagtaatgaggtatttaattatta 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  200245 ctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcaataatgaggtattcaattatta 200146  T
Q  401 tcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattcacaattaagacacaa 500  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  200145 tcactcaagtttaaggtgcccaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaattcacaattatgacacag 200046  T
Q  501 gttgaagtcgttgttgc 517  Q
    ||| |||| ||| ||||    
T  200045 gttcaagtggttattgc 200029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 413; Significance: 0; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 1 - 517
Target Start/End: Complemental strand, 28948928 - 28948413
Alignment:
Q  1 tttgcttcggatttgttgttctcttatcctccataaactctatatttcagttttaactagttatatataagctatatttgcaatgccatgatttcttatg 100  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28948928 tttgcttcggatttgttgttcacttatcctccttaaactctatatttcagttttaactagttatatataagctatatttgtaatgccatgatttcttatg 28948829  T
Q  101 ttttttgtgacattcaaagcatgtttcttatggttttgcggctggtttggttgcgacttcaggtgctgttcctggcctgctaacctgctacggctggggg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  28948828 ttttttgtgacattcaaagcatgtttcttatggttttgcggctggtttggttgcggcttcagctgctgttcctggcctgctaacctgctacggttggggg 28948729  T
Q  201 tagttttttggccaagggcctggttggtttttgttgtctctgtaattgctttctagactttctaggcnnnnnnnnatgttaactggactgcctcttcctt 300  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||    
T  28948728 tagttttttggccaagggcctggttggttttgtttgtctctgtaattgctttctagactttctagg-atttttttatgttaactggactgcctcttcctt 28948630  T
Q  301 ctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcagtaatgaggtatttaattatta 400  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  28948629 ctggtgtttcggtttgcaaacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcaataatgaggtattcaattatta 28948530  T
Q  401 tcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattcacaattaagacacaa 500  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  28948529 tcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaattcacaattaagacacag 28948430  T
Q  501 gttgaagtcgttgttgc 517  Q
    ||| |||| ||| ||||    
T  28948429 gttcaagtggttattgc 28948413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 1 - 517
Target Start/End: Original strand, 22990554 - 22991060
Alignment:
Q  1 tttgcttcggatttgttgttctcttatcctccataaactctatatttcagttttaactagttatatataagctatatttgcaatgccatgatttcttatg 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22990554 tttgcttcggatttgttgttcacttatcctccataaactctatatttcagttttaactagttatatataagctatatttgcaatgccatgatttcttatg 22990653  T
Q  101 ttttttgtgacattcaaagcatgtttcttatggttttgcggctggtttggttgcgacttcaggtgctgttcctggcctgctaacctgctacggctggggg 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22990654 ttttttgtaacattcaaagcatgtttcttatggttttgcggctggtttggttgcggcttcaggtgctgttcctggcctgctaacctgctacggctggggg 22990753  T
Q  201 tagttttttggccaagggcctggttggtttttgttgtctctgtaattgctttctagactttctaggcnnnnnnnnatgttaactggactgcctcttcctt 300  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |            |||||||||||||||||||||||||    
T  22990754 tagttttttggccaagggtctggttggtttttgttgtctctgtagttgctttctaggcttttt----------ttatgttaactggactgcctcttcctt 22990843  T
Q  301 ctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcagtaatgaggtatttaattatta 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  22990844 ctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcaataatgaggtattcaattatta 22990943  T
Q  401 tcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattcacaattaagacacaa 500  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  22990944 tcactcaagtttaaggtgcccaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaattcacaattatgacacag 22991043  T
Q  501 gttgaagtcgttgttgc 517  Q
    ||| |||| ||| ||||    
T  22991044 gttcaagtggttattgc 22991060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 110 - 517
Target Start/End: Complemental strand, 22703454 - 22703057
Alignment:
Q  110 acattcaaagcatgtttcttatggttttgcggctggtttggttgcgacttcaggtgctgttcctggcctgctaacctgctacggctgggggtagtttttt 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703454 acattcaaagcatgtttcttatggttttgcggctggtttggttgcggcttcaggtgctgttcctggcctgctaacctgctacggctgggggtagtttttt 22703355  T
Q  210 ggccaagggcctggttggtttttgttgtctctgtaattgctttctagactttctaggcnnnnnnnnatgttaactggactgcctcttccttctggtgttt 309  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |            ||||||||||||||||||||||||||||||||||    
T  22703354 ggccaagggtctggttggtttttgttgtctctgtagttgctttctaggcttttt----------ttatgttaactggactgcctcttccttctggtgttt 22703265  T
Q  310 cggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcagtaatgaggtatttaattattatcacttaag 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||    
T  22703264 cggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcaataatgaggtattcaattattatcactcaag 22703165  T
Q  410 tgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattcacaattaagacacaagttgaagtc 509  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||     
T  22703164 tttaaggtgcccaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaattcacaattatgacacaggttcaagtg 22703065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 384 - 517
Target Start/End: Original strand, 22698733 - 22698866
Alignment:
Q  384 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 483  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22698733 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 22698832  T
Q  484 tcacaattaagacacaagttgaagtcgttgttgc 517  Q
    ||||||||||||||||||||||||| ||||||||    
T  22698833 tcacaattaagacacaagttgaagttgttgttgc 22698866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 384 - 517
Target Start/End: Complemental strand, 22981797 - 22981664
Alignment:
Q  384 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 483  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22981797 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 22981698  T
Q  484 tcacaattaagacacaagttgaagtcgttgttgc 517  Q
    ||||||||||||||||||||||||| ||||||||    
T  22981697 tcacaattaagacacaagttgaagttgttgttgc 22981664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 384 - 517
Target Start/End: Complemental strand, 22995384 - 22995251
Alignment:
Q  384 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 483  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22995384 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 22995285  T
Q  484 tcacaattaagacacaagttgaagtcgttgttgc 517  Q
    ||||||||||||||||||||||||| ||||||||    
T  22995284 tcacaattaagacacaagttgaagttgttgttgc 22995251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22714671 - 22714557
Alignment:
Q  1 tttgcttcggatttgttgttctcttatcctccataaactctatatttcagttttaactagttatatataagctatatttgcaatgccatgatttcttatg 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22714671 tttgcttcggatttgttgttcacttatcctccataaactctatatttcagttttaactagttatatataagctatatttgcaatgccatgatttcttatg 22714572  T
Q  101 ttttttgtgacattc 115  Q
    |||||||| ||||||    
T  22714571 ttttttgtaacattc 22714557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 56560508 - 56560631
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  56560508 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 56560607  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || || | | || |||||||||||    
T  56560608 aactttaaatttgagacacaagtt 56560631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 24036297 - 24036208
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  24036297 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 24036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 16565539 - 16565662
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||| | ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||    
T  16565539 taatgaagtaatcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtagcatgcct 16565638  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || |||| |  | |||||||||||    
T  16565639 aagttcaaatatgagacacaagtt 16565662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 15618844 - 15618930
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattct 466  Q
    |||||| ||||| ||||| ||||||| |||| || | |||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  15618844 taatgaagtattcaattactatcactcaagtttaggatgcacaattgaaaaaacttttggggtatggaagaatagatttgcaattct 15618930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 476
Target Start/End: Complemental strand, 52057042 - 52056980
Alignment:
Q  414 aggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatg 476  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||||| ||| ||||| ||||||    
T  52057042 aggtgcacaatagaaataacttttagggtatggaagaacagatttgaaatcctacgtcgcatg 52056980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 384 - 517
Target Start/End: Original strand, 22809984 - 22810117
Alignment:
Q  384 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 483  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22809984 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 22810083  T
Q  484 tcacaattaagacacaagttgaagtcgttgttgc 517  Q
    ||||||||||||||||||||||||||||||||||    
T  22810084 tcacaattaagacacaagttgaagtcgttgttgc 22810117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 33232457 - 33232580
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  33232457 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 33232556  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || || | | || |||||||||||    
T  33232557 aactttaaatttgagacacaagtt 33232580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 380 - 503
Target Start/End: Complemental strand, 7072115 - 7071992
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||||||||||||||||| || | |||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| |||||| ||    
T  7072115 taatgaagtatttaattattatcactcaaatttaaggtgcacaatagaaagaacttttggggtatggaagaacatatttgcaatcctacgtcgcatgcct 7072016  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || || | | || |||||||||||    
T  7072015 aactttaaatttgagacacaagtt 7071992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 22481515 - 22481638
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||    
T  22481515 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtagcatgcct 22481614  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || |||| |  | |||||||||||    
T  22481615 aagttcaaatatgagacacaagtt 22481638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 22808657 - 22808703
Alignment:
Q  277 tgttaactggactgcctcttccttctggtgtttcggtttgcagacat 323  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  22808657 tgttaattggactgcctcttccttctggtgtttcggtctgcagacat 22808703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 430 - 503
Target Start/End: Complemental strand, 27738596 - 27738523
Alignment:
Q  430 gaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattcacaattaagacacaagtt 503  Q
    |||||||||| ||||||||||| ||||||||||| ||||| |||||| |||| || | | || |||||||||||    
T  27738596 gaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcctaactttaaatttgagacacaagtt 27738523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 6e-60; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 384 - 517
Target Start/End: Original strand, 19648194 - 19648327
Alignment:
Q  384 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 483  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19648194 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 19648293  T
Q  484 tcacaattaagacacaagttgaagtcgttgttgc 517  Q
    ||||||||||||||||||||||||||||||||||    
T  19648294 tcacaattaagacacaagttgaagtcgttgttgc 19648327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 193387 - 193476
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  193387 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 720991 - 721080
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  720991 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 721080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 882098 - 882187
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  882098 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 882187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 30983306 - 30983217
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  30983306 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 30983217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 44240122 - 44240245
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||||||| | ||||||||| ||||| |||||| ||    
T  44240122 taatgaagtatttaattattatcactcaagtttaagatacacaatagaaagaacttttggggtatggaagaacatatttgcaatcctacgtcgcatgcct 44240221  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || || | | || |||||||||||    
T  44240222 aactttaaatttgagacacaagtt 44240245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 6e-60; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 384 - 517
Target Start/End: Original strand, 4345989 - 4346122
Alignment:
Q  384 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 483  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4345989 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 4346088  T
Q  484 tcacaattaagacacaagttgaagtcgttgttgc 517  Q
    ||||||||||||||||||||||||||||||||||    
T  4346089 tcacaattaagacacaagttgaagtcgttgttgc 4346122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 46407488 - 46407611
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  46407488 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 46407587  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || || | | || |||||||||||    
T  46407588 aactttaaatttgagacacaagtt 46407611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 387 - 503
Target Start/End: Original strand, 35606336 - 35606452
Alignment:
Q  387 gtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattca 486  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||| ||||  |||||| |||| || |    
T  35606336 gtatttaattattatcactcaagtttaaggtgcacaatagaaagaactgttggggtatggaagaacagatttgcaatcctacatcgcatgcctaacttta 35606435  T
Q  487 caattaagacacaagtt 503  Q
     | ||||||||||||||    
T  35606436 aatttaagacacaagtt 35606452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 50979022 - 50978933
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  50979022 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 50978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 503
Target Start/End: Complemental strand, 35569990 - 35569867
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| ||||||||||||| |||||||||||| ||  ||||| ||    
T  35569990 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaataaatttgcaattctgcgtagcatgcct 35569891  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || |||| |  | |||||||||||    
T  35569890 aagttcaaatatgagacacaagtt 35569867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5928141 - 5928219
Alignment:
Q  1 tttgcttcggatttgttgttctcttatcctccataaactctatatttcagttttaactagttatatataagctatattt 79  Q
    |||||||| |||||||||| | ||||||||| |||||||||||||||||||||||| | ||| |||||||||| |||||    
T  5928141 tttgcttcagatttgttgtgcacttatcctcaataaactctatatttcagttttaagtggttctatataagctctattt 5928219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 462
Target Start/End: Complemental strand, 50979067 - 50979027
Alignment:
Q  422 aatagaaagaacttttggtgtatggaagaatagatttgcaa 462  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  50979067 aatagaaagaacttttggggtatggaagaacagatttgcaa 50979027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 5928350 - 5928378
Alignment:
Q  75 tatttgcaatgccatgatttcttatgttt 103  Q
    |||||||||||||||||||||||||||||    
T  5928350 tatttgcaatgccatgatttcttatgttt 5928378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 384 - 517
Target Start/End: Original strand, 7011653 - 7011786
Alignment:
Q  384 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 483  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7011653 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 7011752  T
Q  484 tcacaattaagacacaagttgaagtcgttgttgc 517  Q
    |||||||||||| |||||||||||||||||||||    
T  7011753 tcacaattaagatacaagttgaagtcgttgttgc 7011786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 51125466 - 51125377
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  51125466 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 51125377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 52692542 - 52692631
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  52692542 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 52692631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 16246876 - 16246797
Alignment:
Q  407 aagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattca 486  Q
    |||| |||| |||||||| ||||||||||||   | ||||||||||||||||||||||||||| |||||| |||| ||||    
T  16246876 aagtttaagatgcacaattgaaagaacttttaaggcatggaagaatagatttgcaattctacgtcgcatgcctaagttca 16246797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 23361058 - 23360928
Alignment:
Q  384 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaactttt-ggtgtatggaagaatagatttgcaattctacgacgcatgactaaa 482  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  23361058 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaactttttggtgtatgaaagaatagatttgcaattctacgacgcatgactaaa 23360959  T
Q  483 ttcacaattaagacacaagttgaagtcgttg 513  Q
    |||||||||||||||||||||||||||||||    
T  23360958 ttcacaattaagacacaagttgaagtcgttg 23360928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 13895999 - 13896122
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  13895999 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 13896098  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || || | | || |||||||||||    
T  13896099 aactttaaatttgagacacaagtt 13896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 14036616 - 14036739
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  14036616 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 14036715  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || || | | || |||||||||||    
T  14036716 aactttaaatttgagacacaagtt 14036739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 14380107 - 14380196
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  14380107 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 14380196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 380 - 503
Target Start/End: Complemental strand, 5917028 - 5916905
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||  ||||| ||    
T  5917028 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctacgtagcatgcct 5916929  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || |||| |  | |||||||||||    
T  5916928 aagttcaaatatgagacacaagtt 5916905  T

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Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 36311597 - 36311720
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||    
T  36311597 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtagcatgcct 36311696  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || |||| |  | |||||||||||    
T  36311697 aagttcaaatatgagacacaagtt 36311720  T

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Target: chr6 (Bit Score: 68; Significance: 4e-30; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 380 - 503
Target Start/End: Complemental strand, 21515786 - 21515663
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| |||||| ||    
T  21515786 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacatatttgcaatcctacgtcgcatgcct 21515687  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || || | | || |||||||||||    
T  21515686 aactttaaatttgagacacaagtt 21515663  T

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Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 30019220 - 30019309
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 469  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||    
T  30019220 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacatatttgcaatcctacg 30019309  T

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Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 16547456 - 16547579
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 479  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||    
T  16547456 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtagcatgcct 16547555  T
Q  480 aaattcacaattaagacacaagtt 503  Q
    || |||| |  | |||||||||||    
T  16547556 aagttcaaatatgagacacaagtt 16547579  T

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Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 17830845 - 17830768
Alignment:
Q  387 gtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaatt 464  Q
    ||||| ||||| || |||| |||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17830845 gtattcaattactaccactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaatt 17830768  T

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Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 37638703 - 37638787
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaatt 464  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  37638703 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggtgtatggaagaatagatttgcaatt 37638787  T

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Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 20087918 - 20087992
Alignment:
Q  5 cttcggatttgttgttctcttatcctccataaactctatatttcagttttaactagttatatataagctatattt 79  Q
    |||| |||||||||||| | | |||||||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  20087918 cttcagatttgttgttcacctgtcctccataagctctatatttcagttttaactggttatatataagctctattt 20087992  T

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Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 464
Target Start/End: Complemental strand, 10372799 - 10372715
Alignment:
Q  380 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaatt 464  Q
    |||||| |||||  |||| || |||| |||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  10372799 taatgaagtattcgattactaccactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaatt 10372715  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 476
Target Start/End: Original strand, 12963342 - 12963399
Alignment:
Q  419 cacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatg 476  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  12963342 cacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtcgcatg 12963399  T

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Target: scaffold0394 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 458
Target Start/End: Complemental strand, 6678 - 6607
Alignment:
Q  387 gtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagattt 458  Q
    ||||| ||||| || |||| |||| |||| |||||||| |||||||||||||| ||||||||||||||||||    
T  6678 gtattcaattactaccactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagattt 6607  T

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