View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12146_high_12 (Length: 268)
Name: NF12146_high_12
Description: NF12146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12146_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 25 - 251
Target Start/End: Original strand, 39163167 - 39163393
Alignment:
| Q |
25 |
tctctgacctatgagccattgttaacaccttagaattgattgcctctatagggaattcatattgtaaacgatccttgcttaaagaaagtgcatgtgtaca |
124 |
Q |
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| T |
39163167 |
tctctgacctatgagccattgttaacaccttagaattgattgcctctatagggaattcatattgtaaacgatccttgcttaaagaaagtgcatgtgtaca |
39163266 |
T |
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| Q |
125 |
tgttttatacataactgtcatatagataaataaatctcaattcatttgtgtcggaaacttcatgccaagnnnnnnnnnnatgacatagtcctgtcatcta |
224 |
Q |
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| T |
39163267 |
tgttttatacataactgtcatatagataaataaatctcaattcatttgtgtcggaaacttcatgccaagttttttttttatgacatagtcctgtcatcta |
39163366 |
T |
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| Q |
225 |
tgtattcaagcttttcaaagtaccaca |
251 |
Q |
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| T |
39163367 |
tgtattcaagcttttcaaagtaccaca |
39163393 |
T |
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