View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12146_low_24 (Length: 214)
Name: NF12146_low_24
Description: NF12146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12146_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 43015000 - 43015177
Alignment:
| Q |
18 |
aggcatatacaacaggaacacgaaagaggagaaagattcaaaccgaagagtgtgacttacaaggaagtacaggaggagaaacaagatggcacaaaactgg |
117 |
Q |
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| T |
43015000 |
aggcatatacaacaggaacacgaaagaggagaaagattcaaaccgaagagtgtgacttacaaggaagtacaggaggagaaacaagatggcacaaaactgg |
43015099 |
T |
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| Q |
118 |
taagaccagacctgttatggttaatggtaaacaaaaaggttgcaagaaaattcttgttctctacaccaactttggaaa |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
43015100 |
taagaccagacctgttatggttaatggtaaacaaaaaggttgcaagaaaattcttgttctctacaccaacttcggaaa |
43015177 |
T |
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